>input_sequence_79715
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-------------------------------------------ATGGATCGTAATCATGCGGCCAG-AAACAGCGCACCC
C-TTCCCTTATCT---GCAGCACATATCCTTCTTCCTTCTCCATCGCTCAGCTCCCCTG-CCCCATCCCCACAACTCCGT
TCCCT-GTCCTGCACCACCAGCGCCGCCGCAACTCCGGTCCC-TGTCCCGCACCACTGCCTTCGCTGCTGTGACCCTCCT
---------CCTCCTCCTCCTCC------CCCCA---------CCCCC---TCGCCCT----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CAATCTCCCTCCTCCC--TTTTC
CTTTCTC--TGATG-GGCCACGGC-TCGC-CCTGAATCCCGTGATCCCCGACGACCATCTCTCATCGGAGATGGACACGA
CGAC-AGGGGGAGCC----------CTGCGATGCCGGAACCAGCATCTATTTTTGCTGCAACCTGCCGGCCAAAACGCTG
GAACCGGTCCAGCTCAGAAGCTA-AAAACGGACGAGACTAGATGCTACGAGCGGCGAGGTGGATCTCAGTGA--------
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--------------------------------------------
>chr1A_1_TraesCS1A01G132500
CGTGGAGACAAGTAAAGAAAAAGGAACGTGAAAGACAAGCTGCCACGTTTGGATTTGGGGAGTCTCATCCCTTTGTTGAA
AAAAAAATCTGGTTTGTTGACCACCTCATAATACTAGTTGCCACGTTTGGATTTGGGAGTAAAAAAAAATCTGACCGGTC
AATTATTAGAGCTGATCCGAATAGTTAAGAAAAAAAAATTGAGAAAGGAAAGAGATTAAAAGGAGGAAGTTTGTCCATCG
CTTGTGTGTATTTGGCATATTTTAATTAGCTGCTACCTTTGTGCCTTGTTATTTTCAGCAGGAAAGGAGAGAGAATCACG
TTCAGATCTCTTGCCCTGTACAAGAAAAGAAACTTTGGATACTTGGAAGGTTCGGATTAGGATATAAAAAAGA-GGCAAC
TACCAATCTGTTCGGTTGGAAGAAAGCGTGAATAGTGGCTTAGATATTGAGGTTGTTGGCGTGAGGTTGTTGG-AAAAAA
AAGAATTGAGAGAGAATATTCGGCCATATTAAAAGGCAACTCTGGTCAGCAAAAGAATTAAGGACGCGGCTAGCCAGCGC
CGCTGCGCTCATTAGTTGGTTCGAGCGCATCTTCCACGCACCTGCTGAACAAAACAGTTACCAGCGCCTTCGCCCACCAC
GCATCCATCCATCGACAGCAGCCAGCACGTACATACGTACGTGTGCATGGAAAATTAAGTTGCTGGTGCGTTGACGTGGC
TAGCTTGCTTCTTTCCGCTTTGCGATTTTTTCTTGAATGTGTGCTGACTGCTGGTGATCTTTGGAACTTATAAAACTATC
CTGGGATATAACGATAGGTTGATGCATGTCTGTTATGTTGTCTTGCCAGATCGACAGATTATGCAGAAGGCATAACTGAA
TCAGCATACATGAGACCCAATCTGTTGAGTGCTCATTACTTCAATTGGTTTAATTTCAATGGGAAACGTTTCCAGCCGGG
GCACCGGCCGAACTGTTACGCCGGTCTCACG-CAAGCCGCGAGATGGATCGTAATCATGCGGCCAG-AAACAGCGCACCC
C-TTCCCTTATCT---GCAGCACATATCCTTCTTCCTTCTCCATCGCTCAGCTCCCCTG-CCCCATCCCCACAACTCCGT
TCCCT-GTCCTGCACCACCAGCGCCGCCGCAACTCCGGTCCC-TGTCCCGCACCACTGCCTTCGCTGCTGTGACCCTCCT
---------CCTCCTCCTCCTCC------CCCCA---------CCCCC---TCGCCCT----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CAATCTCCCTCCTCCC--TTTTC
CTTTCTC--TGATG-GGCCACGGC-TCGC-CCTGAATCCCGTGATCCCCGACGACCATCTCTCATCGGAGATGGACACGA
CGAC-AGGGGGAGCC----------CTGCGATGCCGGAACCAGCATCTATTTTTGCTGCAACCTGCCGGCCAAAACGCTG
GAACCGGTCCAGCTCAGAAGCTA-AAAACGGACGAGACTAGATGCTACGAGCGGCGAGGTGGATCTCAGTGACGAGCTTC
AAATGAGAGGCGACCGGTGCTGCAACCAGCGTGGATTT-GAGCTGGAACCGGCCGAAAAAATAGCTGCATCCAGCGTGGA
TTTTTGCT---ACCAAAAACAAGGCGTATTCTGACCGGCAAACAGGCATACTGCTGAAAGCTTCAAGCGGCAAGGAAAAA
AGCTTCAACCGACAT----------------------A-AAAAATGCTTCAACCATGAAAAATCATAAACAAAAAAAGCT
TCAACCCGTGGAAAAAA--T--TGGACTTGCGCGGC----------------------AAAGGCTTCAACCGGTGTGTAA
AAAAGCTTCAACAGGCGAAGGAAAAAGCTTCAAACCATGAG-AAAAAGCTTCAATGGGGTGGGAGAACAGTTTCAACCAT
GGAAAAAA-TTCTTACGAGCGATGCTGGAAAAAGCTTCAACCGC----------------------TGTGTGAAA-----
---------------------------------------AAGCTT-CAACCATGGAAAAGCTTCAATGGGCCTGGAAGAA
AAGCTTCAAACGTGGAAAATGTTTCAACCGGGAAATAAAAAGCTTCAACCCACAAGGAAAAAAGCTTCCACTAGGCGGCG
GCATGATGACGATGTGCGAGCGGGGAGACGCGTCTGGCGGCATGGCA--------------GTGCTACGACGGCGGCGGT
TAATTG-CAGCAACGACGAAGGGGTCGGCAGTCTTACGACGACGG--------------------------CGT-TTGCT
ACAGGTGAGGACGGAGTGCTGCGATGAGGTCTCTTCGCTGGAACCATCGAGCACGGGTGTTGCGAGGACGGCGATTGGCG
GCGGCGACGGCGACCGGCGGCAAGGATAGCCGGCGACCAGCGGCGAGGACGCCCGACAAGGACGCGGGAGCACGCGTGGT
TGGGGTATGGTGGATGGCGAGTAATCAGGGGGAAGCACGTTAACTCAGCTTGAAGACGACGGGAAGAAAGAAGATGGGAT
CAGATCGGACGG-CTCTGCGCGCATGCATCGGGCGGCTGCGGTGCGACCGGCCGAAACATTCG-------CACCGGCGCA
GATTACTCGCCAATTTCAATTGACTCCTAGTTTCCGAAGACAGA
>chr3A_1
CGTGGCGAGAAGTAAAGAAAAAGGAACGTGAAAGACAAGCTGCCACGTTTGGATTTGGGGAGTCTGATCCCTTTGTTGAA
AAAAGAAACTGGTTTGCTGACCGCCTCATAATACTAGTTGCCACGTTTGGATTTTCAAGT-AAAAAAAATCTGACCGGTC
AATTATTAGAGCTGATCCGAATAGTCAAG---AAAAAATTGAGAAAGGAAAGAGATTAAAAGGAGGAAGTTTGTCCATCG
CTTGTGTGTATTTGGCATGTTTTAATTAGCTTCTACCTTTGTGCCTTGTTATTTTCGGCAGGAAAGCAGAGAGAATCACG
TTCAGATCTCTTGCCCTGTACAAGGAAAGAAATTTTGGATACATGGAAGGTTCGGATTAGGATATAAGAAAAAGGGCAAC
TGCCAATCGGTTCGGTTGGAAGAAAGCGTGAATAATGGCTTAGATATTGAGGTTGTTGGCGTGAGCTTGTTGGAAAAAAA
AAGAATTGAGAGAGAATATTTGGCCATATTAAAAGGCAAGTCTGGTCAGCAAAAC-------------------------
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---------------------------------GAATT-AAAGGA-----------------------------------
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--------------------------------------------
>chr6B_930
AATTTCGAA-----------------------------------------------------------------------
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------------------------------------------------------------GGGAAACGTTTCGAGCCGGG
GCACCGGCCGAACTGTTACGCCGGTCTCACG-CAAGCCGCGAGATGGATCGTAATCATGCGGCCAG-AAACAGCGCACCC
C-TTCCCTTATCT---GCAGCACATATCCTTCTTCCTTCTCCATCGCTCAGCTCCCCTG-CCCCATCCCCACAACTCCGT
TCCCT-GTCCTGCACCACCAGCGCCGCCGCAACTCCGGTCCC-TGTCCCGCACCACTGCCTTCGCTGCTGTGACCCTCCT
---------CCTCCTCCTCCTCC------CCCCA---------CCCCC---TCGCCCT----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CAATCTCCCTCCTCCC--TTTTC
CTTTCTC--TGATG-GGCCACGGC-TCGC-CCTGAATCCCGTGATCCCCGACGACCATTTCTCATCGGAGATGGACACGA
CGAC-AGGGGGAGCC----------CTGCGATGCCGGAACCAGCATCTATTTTTGCTGCAACCTGCCGGCCAAAACGCTG
GAACCGGTCCAGCTCAGAAGCTA-AAAACGGACGAGACTAGATGCTACGAGCGGCGAGGTGGATCTCAGTGACGAGCTTC
AAATGAGAGGCGACCGGTGCTGCAACCAGCGTGGATTT-GAGCTGGAACCGGCCGAAAAAATAGCTGCATCCAGCGTGGA
TTTTTGCT---ACCAAAAACAAGGCGTATTCTGACCGGCAAACAGGCATACTGCTGAAAGCTTCAAGCGGCAAGGAAAAA
ATCTTCAACCGACAT----------------------A-AAAAATGCTTCAACCATGAAAAATCATAAACAAAAAAAGCT
TCAACCCGTGGAAAAAA--T--TGGACTTGCGCGGC----------------------AAAGGCTTCAACCGGTGTGTAA
AAAAGCTTCAACGGGCGAAGGAAAAAGCTTCAAACCATGAG-AAAAAGCTTCAATGGGGTGGGAGAACAGTTTCAACCAT
GGAAAATA-TTCTTACGAGCGATGCTGGAAAAAGCTTCAACCGC----------------------TGTGTGAAAAAGCT
TCAACCGCTGTGTGAAAAAGCTTCAACCGTTGAATGAAGAAGCTT-CAACCATGGAAAAGCTTCAATGGGCCTGGAAGAA
AAGCTTCAAACGTGGAAAATGCTTCAACCGGGAAATAAAAAGCTTCAACCCACAAGGAAAAAAGCTTCCACTAGGCGGCG
GCATGATGACGATGTGCGAGCGGGGAGACGCGGCTGGCGGCATGGCA--------------GTGCTACGACGGCGGCGGT
TAATTG-CAGCAACGACGAAGGGGTCGGCAGTCTTACGACGACGG--------------------------CGTTTTGCT
ACAGGTGAGGACGGAGTGCTGCGATGAGGTCTCTTCGCTAGAACCATCGAGCACGGGTGTTGCGAGGACGGCGATTGGCG
GCGGCGACGGCGACCGGCGGCAAGGATAGCCGGCGACCAGCGGCGAGGACGCCCGACAAGGACGCGGGAGCACGCGTGGT
TGGGGTATGGTGGATGGCGAGTAATCAGGGGGAAGCACGTTAACTCAGCTTGAAGACGACGGGAAGAAAGAAGATGGGAT
CAGATCGGACGG-CTCTGCGCGCATGCATCGGGCGGCTGCGGTGCGACCGGCCGAAACATTCGGCCGGCGCACCGGCGCA
GATTACTCGCCAATTTCGAAT-----------------------
>chr4A_936
AATAGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------GAAACGTTTCCAGCCGGG
GCACCGGCCGAACTGTTACGCCGGTCTCACG-CAAGCCGCGAGATGGATCGTAATCATGCGGCCAG-AAACAGCGCACCC
C-TTCCCTTATCT---GCAGCACATATCCTTCTTCCTTCTCCATCGCTCAGCTCCCCTG-CCCCATCCCCACAACTCCGT
TCCCT-GTCCTGCACCACCAGCGCCGCCGCAACTCCGGTCCC-TGTCCCGCACCACTGCCTTCGCTGCTGTGACCCTCCT
---------CCTCCTCCTCCTCCTCCTCCCCCCA---------CCCCC---TCGCCCT----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CAATCTCCCTCCTCCC--TTTTC
CTTTCTC--TGATG-GCCCACGGC-TCGC-CCTGAATCCCGTGATCCCCGACGACCATCTCTCATCGGAGATGGACACGA
CGAC-AGGGGGAGCC----------CTGCGATGCCGGAACCAGCATCTATTTTTGCTGCAACCTGCCGGCCAAAACGCTG
GAACCGGGCCAGCTCAGAAGCTA-AAAACGGACGAGACTAGATGCTACGAGTGGCGAGGTGGATCTCAGTGACGAGCTTC
AAATGAGAGGCGACCGGTGCTGCAACCAGCGTGGATTT-GAGCTGGAACCGGCCGAAAAAATAGCTGCATCCAGCGTGGA
TTTTTGCT---ACCAAAAACAAGGCGTATTCTGACCGGCAAACAGGCATACTGCTGAAAGCTTCAAGCGGCAAGGAAAAA
AGCTTCAACCGACAT----------------------A-AAAAATGCTTCAACCATGAAAAATCATAAACAAAAAAAGCT
TCAACCCGTGGAAAAAA--T--TGGACTTGCGCGGC----------------------AAAGGCTTCAACCGGTGTGTAA
AAAAGCTTCAACGGGCGAAGGAAAAAGCTTCAAACCATGAG-AAAAAGCTTCAATGGGGTGGGAGAACAGTTTCAACCAT
GGAAAATA-TTCCTACGAGCGATGCTGGAAAAAGCTTCAACCGC----------------------TGTGTGAAAAAGCT
TCAACCGCTGTGTGAAA----------------------AAGCTT-CAACCATGGAAAAGCTTCAATGGGCCTGGAAGAA
AAGCTTCAAACGTGGAAAATGTTTCAACCGGGAAATAAAAAGCTTCAACCCACAAGGAAAAAAGCTTCCACTAGGCGGCG
GCATGATGACGATGTGCGAGCGGGGAGACGCGGCTGGCGGCATGGCA--------------GTGCTACGACGGCGGCGGT
TAATTG-CAGCAACGACGAAGGGGTCGGCAGTCTTACGACGACGG--------------------------CGTTT-GCT
ACAGGTGAGGACGGAGTGCTGCGATGAGGTCTCTTCGCTGGAACCATCGAGCACGGGTGTTGCCAGGACGGCGATTGGCG
GCGGCGACGGCGACCGGCGGCAAGGATAGCCGGCGACCAGCGGCGAGGACGCCCGACAAGGACGCGGGAGCACGCGTGGT
TGGGGTATGGTGGATGGCGAGTAATCAGGGGGAAGCACGTTAACTCAGCTTGAAGACGACGGGAAGAAAGAAGATGGGAT
CAGATCGGACGG-CTCTGCGCGCATGCATCGGGCGGCTGCGGTGCGACCGGCCGAAACATTCGGCCGGCGCACCGGCGCA
GATTACTCGCC---------------------------------
>chr5B_938
--------------------------------------------------------------------------------
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-----------------------------------------------------------TGGTAAACGTTTCCAGCTGGG
GCGCCAGCTGAACCGTTACGTCGGACACATG-CAAGCCGTGAGATGGATCATAATCATGCGGCCAG-AAACAGCGCACCC
CCTTCCCTTATCT---GCAGCACATCTCCTTTTTCCTTATCCAGCACTCAGCTCCTCCG-CCCCATCCCCACAGCTCCAT
TCCCC-GTCCTGCACCACCGGCGTCGCTGCAGCTCCGGCCCCCTGTCCCGCACCACTGCCTTCGCTGTTGCGACCCTCCT
---------CCT----------C------CTCCC---------CCCCT---CCGCCCT----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TAATCTCCCTCCT------TTTC
CTTTCTTTATGATG-GCCAAGGCT-TCGC-CCTGAATCCCGTGATCCCCGATGACCATCTCTCATTGGAGATGGACATGA
CGAC-ATGGGGGGAGCCCTGCGCGGCTGCGTTGCCGGAACCAACATCTATTTTTGCTGCAACCTGCCAGCCAAAACGCTG
GAACCGG-CCAACTCAGAAGCTG-AAAATCGGCGAGACTAGGTGCTACGAGCGGTGAGGTGGAGCTCAGCGACGAGCTTC
AACT-AGAGGCGACCGGTGCTGCAACTAGCGTGGATTC-GAGCTAGAACCGGCCAGCAAAATAGCTGCATCCAGGGTGGA
TTTTTGGT---ACCAGAAC-AAGTTGTGTTCTGACCGGC-AACAGGCATAATGCTGAAAGCTTCAACCAGCATGGAAAAA
GTCTTCAACTGACAT----------------------A-AAAAAAGCTTCAACCATGAAAAATCATAAACAGAAAAATCT
TCAACCCGTGTAAATAA--TCTTCGACTTGCGCGGC--------------------------------------------
AAAAGCTTCAACAGGCGAAGGACAAAGGTTCAA-CCATGGG-AAAAAGCTTCAATGGGGTGGAAAAACAATTTCAACCAT
GGAAAATA-T-CTTATGAGCGACGCTGAAAAAAGCTTCAATCGG----------------------TGTGTGAAAAAGCT
TCAACCGTTGAATGAAG----------------------AAGC-T-CAACCATGGAAAAGCTTCAATGGGCCTAGAAGAA
AAGCTTCGAATGTGGAAAAGGTTTGAACCGGGAAAGAAAAAGCTTTAACCGACAAGGAAAAATGCTTTCACCAGGCGGCA
ACATGACGACGATGTGCGAGCGGGGAGCT-------ACGGCATGGCG--------------GTGCTACGATGGCGGCGGT
TAATTG-CTGCAACGACGAAGGGGTCGGGCGTCTTACGACAATGAAGGGGTCGGGCGTCTTACGACGACGACG-TT-GCT
ACAGACAAGGGCGGGGTGTTGCGATGAGGTCTTTT-GCTGGAACCATCGAGCACGGGTGTTGCAAGGACGACGATTGGCG
ATGGCGA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
>chr5D_938
--------------------------------------------------------------------------------
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-----------------------------------------------------------TGGGAAACGATTCCAGCCGGG
GCACCGGCCGAACCGTTACTCCGGTCTCACG-CAAGCCGCGAGATGGATCGTAATCATGTGGCCAG-AAACAGCTCACCC
C-TTTCCTTATCT---GCAACACAT---CTCCTTCCTTCTCCATCGCTCAGCTCCACCG-CCCCATCCCCACAACTCTGT
TCCCC-GTCCTGCACCACCGGCATCGCCGCAACTCCAGTCCCCCGTCCCGCACCACCGCCTTCNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATCTCCCTCCTCCT--TTTTC
CTTTCTC--TATGATGGCCAACGC-TCGC-CCTGAATCCCGTGATCCCCGACGACCATCTCTCACCGGAGATGGACAGGA
CGACAAGGGGGGA-GCCCTGCGCGGCTGCGATGCCGGAACCAGCATCTATTTTTGCTGCAACCTGCCGGCCAAAACGCTG
GAA-------------------------CCGGCGAGACTAGATGCTACGAGCGGCGAGGTGGAGCTCAGCGACGAGCTTC
AAATG-GAGGCGACCGGTGCTGCAACCAGCGTGGATTT-GAGCTGGAACCGGCCGACAAAATAGCTGGTTCCAGCGTGGA
TTTTTGCT---ACCAGAAACAAGGCGTGTTCCGACCGG----CAGGCATAATGTTGAAAGCTTCAACCGGCAAGGAAAAA
GGCTTCAACCGACAT----------------------A-AAAAAAGCTTCAACCATGAAAAATCATAAACAAAAAAAGTT
TCAACCTGCGGCTAAAAAA-------------------------------------------------------------
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--------------------------------------------
>chr1A_939
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------------------------------------------------------------GGGAAACGTTTCCAGCGGGG
GTACCGGACGAACCGTTACGCCGGACTCACG-CAAGCCGCGAGATGGATCGTAATCATGCGGCCAG-ATACAACGCACCC
C-TTTCCTTATCT---GCAGCACATATCCTTCTTCCTTCTCCATCGCTCAGCTCCCCCA-CCCCATCCCCACAACTCCGT
TCCGC-ATCCTGCACCACCAGCGTCGCCGCAACTCTAGTCCCCTGTCCCGCACCATTGCTTTCGCTGTTGCGACCCTCCT
---------CCT----------C------CTCCTTCCCCCCTCCCGCC---TCCGCCC----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CCAATTTCCTCCTCCT--TCTCC
TTTTCTC--TATGATGGCCAACGC-TCGC-CCTGAATCCTATGATCCCCCACGACCATCTCTCATCGGAGATGGACACGA
TGAC-AGGGGGGA-GCCCGGCGCTGCTGCGATGCCGGAACCATCATCTATTTTTGCTGCAACCTGCCGGCCAAAACGCTG
GAAACGG-CCAGCTCAGAAGCTG-AAAACCAGCGAGACTAGATGCTACGAGGGGCGAGGTGGAGATCAATGACGAGCTTC
AAATGAGAGGCGACCGGTGTTGCAACCAGCGTGGATTT-GAGTTGGAACCGGCCGACAAAATAGTTGCATCCAGCGTGGA
TTTTTGCT---ACCAGAAACAAGGCGTGTTCCGACCAGC-AACAGGCATAATGCTGAAAGCTTCAAGCAGCAAGGAAAAA
TGCTTCAACCGACAT----------------------A-AAAAAAGCTTCAACCAGGAAAAATCATAAACAAAAAAAGCT
TCAACCCGTGCAAAAAATCT--TCGACTTACGCGGC----------------------AAAAGCTTCAATCATTGTGTAA
AAAAGCTTCAACAGGCAAAGGACAAAGCTTCAA-CCATGGG-GAAAAGCTTCAATCGGGTGGGAAAACAGTTTCAACCAT
GGAAAATA-T-CTTACGAGCAACGTTCGAAAAAGCTTTAACCGT----------------------TGTGTGAAAAAGCT
TCAACCGTTGAATGAAG----------------------AAGC-TTCAACCATGGAAAAGCTTCAATGGGCCTGGAAGAA
AAGCTTCAAACATGGAAAAGGTTTCAACCGGGAAAGAAAAGGCTTCAACCAACAAGGAAAAAAGCTTCCACCAGGCGACG
ACATGATGACGACATGCGAGCGGTGAGACGCGGCTGACGGCATGGCG--------------GTGCTACGACGGCGGCGGT
TAATTG-CTGCAACGACGAAGGGTTCGGGCGTATTACGACGACGG--------------------------CG-TT-GCT
ACAGACGAGGGCGGAGTGCTGCGATGAGGTCT-TTCGCTGGAACCATCGAGCACGGGTGTTGCAAGGACGACGATTGGCG
GCAGCAACGGCGACCGGCGGCAAGGATGGCCGGCGACCAGTGACGAGGACAC--------------GGAGCATGCGTGGC
CGGGGTATGGCGGACAGGGC-TAATCACGGGGAAGCATGTTGACCCAGATTGAAGACGACATGAAGAAAGAAGATGGGAT
CTGATCGGACGG-CTCTACGCGCATGTATCAGGCGGCTGCGGTGCGACCGGCCAAAACATTCGGTCGGTGCACCGGCGCA
GATTACTGCC----------------------------------
>chr7B_939
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------GGGAAACGTTTCCAGCCGGG
GCACCGGCCGAACTGTTACGCCGGTCTCACG-CAAGCCGCGAGATGGATCGTAATCATGTGGCCAG-AAACAGCGCACCC
C-TTCCCTTATCT---GCAGCACATATCCTTCTTCCTTCTCCATCGCTCAGCTCCCCTG-CCCCATCCCCACAACTCCGT
TCCCT-GTCCTGCACCACCAGCGCCGCCGCAATTCCGGT-CCCTGTCCCGCACCACTGCCTTCGCTGCTGTGACCCTCCT
CCTCCTCCTCCT----------C------CCCCA---------CCCCC---TCGCCCT----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CAATCTCCCTCCTCCC--TTTTC
CTTTTTC--TGATG-GCCCACGGC-TCGC-CCTGAATCCCGTGATCCCCGACGACCATCTCTCATCGGAGATGGACACGA
CGAC-AGGGGGAGCC----------CTGCGATGCCGGAACCAGCATCTATTTTTGCTGCAACCTGCCGGCCAAAACGCTG
GAACCGGGCCAGCTCAGAAGCTA-AAAACGGACGAGACTAGATGCTACGAGTGGCGAGGTGGATCTCAGTGACGAGCTTC
AAATGAGAGGCGACCGGTGCTGCAACCAGCGTGGATTT-GAGCTGGAACCGGCCGAAAAAATAGCTGCATCCAGCGTGGA
TTTTTGCT---ACCAAAAACAAGGCGTATTCTGACCGGCAAACAGGCATACTGCTAAAAGCTTCAAGCGGCAAGGAAAAA
AGCTTCAACCGACAT----------------------A-AAAAATGCTTCAACCATGAAAAATCATAAACAAAAAAAGCT
TCAACCCGTGGAAAAAA--T--TGGACTTGCGCGGC----------------------AAAGGCTTCAACCGGTGTGTAA
AAAAGCTTCAACGGGCGAAGGAAAAAGCTTCAAACCATGAG-AAAAAGCTTTAATGGGGTGGGAGAACAGTTTCAACCAT
GGAAAATA-TTCTTACGAGCGATGCTGGAAAAAGCTTCAACCGCTGTGTGAAAAAGCTTCAACCGCTGTGTGAAAAAGCT
TCAACCGTTGAATGAAG----------------------AAGC-TTCAACCATGGAAAAGCTTCAATGGGCCTGGAAGAA
AAGCTTCAAACATGGAAAATGTTTCAACCGGGAAATAAAAAGCTTCAACCCACAAGGAAAAAAGCTTCCACTAGGCGGCG
GCATGATGACGATGTGCGAGCGGGGAGACGCGGCTGGCGGCATGGCA--------------GTGCTACGACGGCGGCGGT
TAATTG-CAGCAACGACGAAGGGGTCGGCAGTCTTACGACGACGG--------------------------CGTTT-GCT
ACAGGTGAGGACGGAGTGCTGCGATGAGGTCTCTTCGCTGGAACCATCGAGCACGGGTGTTGCGAGGACGGCGATTGGCG
GCGGCGACGGCGACCGGCGGCAAGGATAGCCGGCGACCAGCGGCGAGGACGCCCGACAAGGACGCGGGAGCACGCGTGGT
TGGGGTATGGTGGATGGCGAGTAATTAGGGGGAAGCACGTTAACTCAGCTTGAAGACGACGGGAAGAAAGAAGATGGGAT
CAGATCGGACGGGCTCTGCGCGGATGCATCGGGCGGCTGCGGTGCGACCGGCCGAAACATTCGGCCGGCGCACCGGCGCA
GATTACTCGCC---------------------------------
>chr2A_939
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------GGGAAACGTTTCCAGCC-GG
GCACCGGCCGAACCGTTACGCAGGTCTCACG-CAAGCCGCGAGATGGATCGTAATCATGCGACCAG-AAACAACGCACCC
C-TTCCCTTATCTGCTGCAGCACATATCCATCTTCCTTCTCCATCGCTCAGCTCCCCCACGCCCATCCCCACAACTCCGT
TTCCC--TCCTGCACCACCGGCGTCGCCGCAACTCCGGTCCCCTGTCTTGCGACCGTCCT--------------CCTCCT
---------CCC----------------------------------CCCCTCCGCCCT----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CAATCTC---CCTCCTCCTTTTC
CTTTCTC--TATGATGGCCAACGC-TCGC-CCTGAATCCCGTGATCCCCGACGACCATCTCTCATCGGAGATGGACACGA
CGAC-AGGGGGGC-GCCCTGCGCTGCTGCGATGCCGGAACCAACATCTATTTTTGCTACAACCTGCAGGCCAAAACGCTG
GAACCGG-CCATCTCGGAAGCTGAAAAACCGGCGAGACTATATGCTACGAGCGGCGAAGTGGAGCTCAACGACGAGCTTC
AAATGAGAGGCGACCGGTGCTGCAACCAGCGTGGATTT-GAGCTGGAACCGGCCGACAAAATAGCTGCATCCAGCGTGGA
TTTTTGCT---ACCGGAAACAAGGCGTGTTCCGATCGGC-AACAGGCATAATGTTGAAAGCTTCAAGCGGCAAGGAAAAA
GGCTTCAACTGACAT----------------------A-AAAAAAGCTTCAACCATGAAAAATAATAAACAAAAAA-GCT
TCAACCCGTGCAAAAAATCT--TCGACTTGCGCGGC----------------------AAAAGCTTCAACCGGTGTGTAA
AAAAGCTTCAACAGGCGAAAGACAAAGCTTCAA-CCATGGG-AAAAAGCTTCAATGGGGTGGGAAAACAGTTTCAACCAT
GAAAAATA-T-CTTACGAGTGACGCCGGAAAAAGCTTCAACCGCTATGTGAAAAAGCTTCAACC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr6D_942
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------AAATGTTTCCAGCCGGA
GCGTCGGCCGAACCGTTACGCCGGACACACGTCAAGCCGCAAGATAGATCGTAATCATGCGGCCAGAAAACAGCGCACTC
C-CTCCCTTATCT---GCAGCACATCTCTTTCTTCCTTCTCCAGCACTCAGCTCCCCCGTCCCCATCCCCGCAGCTCCGT
TCCCCCGTCCCGCACTACCGGCGTCGCCGCAGCTCTGGTCCCCTGTCCCGCACCACTGCCTTCGTTGCTGCGACCCTCCT
---------CTG----------------------------------CCCCCCAACCCC----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CAATCTC---CCTCCT--TTTTC
CTTTCTC--TATGATGGCCAACGC-TCTGACCTGAATCCCGTGATCCCCGACGACCATCTCTCACCGGAGATGGACACGA
CGAC-AAGGGGGCAGCGCTGCGTAGCTACGATGCCTGAACAAGCATCTATTTTTGCTGTAACCGACCAGCCAAAACGCTG
GAACCGA-CCAGCTCAGAAGTTG-CAAACTGGCGCGACTAGATGCTACGAGCAGCGAGGTGGAGCTCAGCGAGGAGCTTC
AACCG-GAGGCGACAGGTGTTTCAACCAGCATGGATTTTGAGCTGGAACCAACCGCCAAA--AGCTGCATCCAGTGTGGA
TTTTTGCTGGAACCAACAGCGAGGCATGTTCCGACTGGC-AACAGGCATAATGCCGAAAGCTTCAACCGGCATGGAGAAT
GGCTTCAACAGGCAT----------------------G-AAAAAAGCTTCAACCATGAAAAATCACAAACAGAAAAAAGC
CTCAACCGTGCAAAAAAAAT--TCGACTTACGCGGC----------------------AAAAGCTTCAACCGTTGTGTAA
AAAAGCTTCAACCGGCAAAGAACAAAGCTTCAA-CCATGGGAAAAAGGCTTCAATGGGGTGGAAAAAAAGTTTCAACCAT
GGAAAAAATT-CTTACGAGCGGCACAGAAAAAAGCTTCAACCGGTGTGTGGAAAAGCTTCAACCGTTG------------
----------AACGAAG----------------------AAGC-TTCAACCATGGAAAAGCCTCAATGGGCATGGAAGAA
AAGCTTCAAACTAA-AAAAGGTTTCAATCGGGAAGGAAAAAGCATCAGCCGGCAAGGAAAAAAGCTTCCATCAGGCGTCG
GCATGATGACGATGTGCGAGCGGGGGGCTGCGGCCGACGGCATGGCGGTGTAGCGACGGGCGTGCTACGACGGCGGCGGT
TAATTA-CTGCAAGGACGAAGAGGTCTGCCGTCCTATGACGACGG--------------------------CGTT--GCT
ACAGACCATGGCGGGGTGGTGCGATGAGGTCT-TTCGCTGGAACCAGCGAGCACGGGTGTTGTGAGGACGAAGATTGGCT
GCGGGGATGGCGACCAGTGGCGAGGATTGCCGGCGACCAGCGTCGAGGACG-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr1A_1013
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------CATGCGACCAG-AAACAGCGCACCC
C-TTCCCTTATCTGCTGCAGCACATATCCTTCTTCCTTCTCCATCGCTCAGCTCCCTCACGCCCATCCCCACAACTCCGT
TCCCC-GTCCTACACCACCGGCGTCGCCGCAACTCCGGTCCCCTGTCCCGCAACACTGCCTTCGCTGCCGCAACCCTCCT
---------CCT----------C------CTCCTCCACCCCCTCCTCCCCTCCGCCCT----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CAATCTC---CTTCCTCCTTTTC
CTTTCTC--TATGATGGCCAACGC-TCGC-CCTGAATCCCGTGATCCCCGTCGACCATCTCTCATCGGAGATGGACACGA
CGAC-AGGGGGGA-GCCCTGCGCTGCTGCGATGCCGGAACCAACATCTATTTTTGCTACAACCTGCAGGCCAAAACGCTG
GAACTGG-CCAGCTCGGAAGCTG-AAAACCGGCGAGACTAGATGCTACGAGCGGCGAGGTGGAGCTCAACGACGAGCTTC
AAATGAGAGGCGACCGGTGCTGCAACCAGCGTGGATTT-GAGCTGGAACCGGTCGACAAAATAGCTGCATCCAGCGTGGA
TTTTTGCT---ACCAGAAACAAGGCGTGTTCCGACCGGC-AACATGCATAATGCTAAAAGCTTCAAGCGGCAAGGAAAAA
GGCTTCAACCGACAT----------------------A-ATAAAAGCTTCAACCATGAAAATCATAAAACAAAAAAATCT
TCAA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
>chr2D_1209
--------------------------------------------------------------------------------
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-----------C----------------------------------CCCCTCCGCCCT----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CAATCTC---CCTCCTCCTTTTC
CTTTCTC--TATGATGGCCAACGC-TCGC-CCTGAATCCCGTGATCCCCGACGACCATCTCTCATCGGAGATGGACACGA
CGAC-AGGGGGGC-GCCCTGCGCTGCTGCGATGCCGGAACCAACATCTATTTTTGCTACAACCTACAGGCCAAAACGCTG
GAACCGG-CCATCTCAGAAGCTGAAAAACCGGCGAGACTATATGCTACGAGCGGCGAAGTGGAGCTCAACGACGAGCTTC
AAATGAGAGGCGACCGGTGCTGCAACCAGCGTGGATTT-GAGCTGGAACCGGCCGACAAAATAGCTGCATCCAGCGTGGA
TTTTTGCT---ACCAGAAACAAGGCATGTTTCGATCGGC-AATAGGCATAATGTTGAAAGCTTCAAGCGGCAAGGAAAAA
GGCTTCAACCGACAT----------------------AAAAAAAAGCTTCAACCATGAAAAATAATAAACAAAAAA-GCT
TCAACCCGTGCAAAAAATCT--TTGACTTGCGCGGC----------------------AAAAGCTTCAA-----------
-----------GAGGCGAAAGACAAAGCTTCAA-CCATGGG-AAAAAGCTTCAATGGGGTGGGAAAACAGTTTCAACCAT
GGAAAATA-T-CTTACGAGTGACGCCGGAAAAAGCTTCAACCGCTATGTGAAAAAGCTTCAACC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr5A_1221
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------CAATCTC---CCTCTTCCTTTTC
CTTTCTC--TATGATGGCCAACGCTTCAC-GCTGAATGCCATGATCCCCGACGACCATCTCTCATCACAGATGGGCACGA
CGAC-AAGGGGGGAGCGCCGCGCGGTTGCGATGCCGGAACCAACATCTTTTTTTGCTGCAACCGGCCAGCCAAAACGTTA
GAACCGG-CTAGCTCAGAAGTTG-AAAACTGGCGAGAGTAGATGCTACGAGCGGCGAGGTTAGGCTCAACGACGAGCTTC
AACTG-GAGGCGACCGATGCTGCAACCAGCGTGGAATT-AAGCTGGAACCGTCCGGCAAAATAGCTGCATCCAGCGTGGA
TTTTTTCT---ACTTGCAACAAGGCGTGTTCTGACCGGC-AACAGGCATAATGCTGAAAGCTTCAACCGGCATGGAAAAA
GGCTTCAATCGGCATGGAAAAAGGCTTCAATCGGCATG-AAAAAAGCTTCAACCATGAAAAATCATAAACAAAAAAAGCT
TCAAC-CGTGCAAAAAATCT--TCGACTCGCGCGAC----------------------AAAAGCTTCAACCGGTGTGTAA
AAAAGCTTCAACCGGCGAAGGACAAAGCTTCAA-CCATGGAAAAAAAGCTTCAATGGGGTGGGAAAACAGTTTCAACCAT
GGAAAAAAT--CTTACGAGCGGCGTGGAAAAAAGCTTCAACCGGTATGTGAAAAAGCTTCATCCGTTG------------
----------ATTGAAG----------------------AAGC-TTCAACCATGGAAAAGCTTCAATGCG--TGGAAGAA
AAGCTTCAAACATGGAAAAGGTTTCAACCATGAAGGAAAAAACTTCAACCGACAAGGAAAAAAGCTTCCACCAGGGGTCG
GCATGATGA-GATGTGCGAGCGGGGATCTGCGGCCGACGGCATGGCG--------------GTGCTACTACGGCAGCGGT
TAATTG-CTGCAACAACGAAGGGGTCGGGCATCCTACGACGACGT--------------------------CG-TT-GCA
ACAGACGAGGGCGGGGTGCTGCGATGAGGTCT-TTCGTTGGAACCAGCGAGCACAGGTGTTGCGAGGACGACGA------
--------------------------------------------------------------------------------
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>chr7A_1390
--------------------------------------------------------------------------------
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----CGG-CCAGCTCAGAAGCTG-AAAACCGGCGAGACTAGATGCTACGAGCGGCGAGGTGGAGCTCAGCGACGAGCTTC
AAACG-GAGGCGACCGGTGCTGCAACCAGCGGGGATTT-GAGCTGGAACCGGCCGACAAAATAGCTGCATCCAGCATGGA
TTTTTGCT---ACCAGAAA-AAGGCGTGTTCCACCCGGC-AACAGGCATAATGCTGAAAGCTTCAACCGGCAAGGAAAAA
GGCTTCAACCGACAT----------------------AAAAGAAAGCTTCAACCATGAAAAATCATAAACAAAAAAAGCT
TCAACCCATGCAAACAATCA--TCAACTTGCGTGGCAAAAGTTTCAACCGGTGTGTAAAAAAGCTTCAA-----------
-----------CAGGCGAAGGACAAAGCTTCAA-CCATGGG-AAAAAGCTTCAATGGGGTGGGAAAACAGTTTTAACCAT
GAAAAATA-T-CTTACGAGTGACGCCGGAAAAAGTTTCAACCGCTGAGTGAAAAAGCTTCAACCGTTG------------
----------AATGAAG----------------------AAGT-TTCAACCATGGAAAAGCTTCAATGGGCCTGGAAGAA
AAGCTTCAATCGTGGAAAAGGTTTCAACCGGGAAAGAAGAAGCTTCAACCGACAAGGAAAAAAGCTTCCACCAGGCGGCG
ACGTGATGACGATGTGCGAGCGGGAAGACGCGGCTGACGGCATGGCG--------------GTGCTACGACGGCGGCGGT
TAATTG-CTGCAACGACGAATGGGTCGGGTGTCTTACGACGACGG--------------------------CA-TT-GCT
ATAGACGAGGGCGGGGTGCTGCTATGAGGTCT-TTCGCTCGAACCATCAAGCACGGGTGTTGCGAGGATGACGATTGGCC
ACGGCGACGGCGGCCAGCGGCGAGGATGCCCGGCGACCAGCGGTAAGGACGCCCGACGAGGACGCGGGAGCACGCGTGGT
AGGGGTATGG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr6A_1391
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----GGGCCAGCTCAGAAGCTG-AAAACCGGCGAGACTAGATGCTACGAGCAGCGAGGTGGAGCTTAGCGACGAGCTTC
AAATG-GAGGCGACCGGTGCTGCAACCAGCGGGGATTT-GAGCTCGAACCGGCCGACAAAATGGTTGCATCCAGCGTGGA
TTTTTGCT---ACCAGAAACAAGGCGTGTTCCAACCGGC-ATCAGGCATAATGCTGAAAGCTTCAACCGGCAAGGAAAAA
GGCTTCAACCGACAT----------------------AAAAAAAAGCTTCAACGATGAAAAATCATAAACAAAAAAAGCT
TCAACCCATGCAAAAAATCT--TCGACTTGCGTGGC----------------------AAAAGCTACAACCGGTGTGTAA
AAAAGCTTCAACGGGCGAAGGACAAAGCTTCAA-CCATGGG-AAAAAACTTCAATGGGGTGGGAAAACAGTTTCAACCAT
GGAAAATA-T-CTTACAAGTGACGCCGGAAAAAGCTTCAACCGCTGTGTGAAAAAGCTTCAACCGTTG------------
----------AATGAAG----------------------AAGT-T-CAACAATGGAAAAGCTTCAATGGGCCTGGAAGAA
AAGCTTCAATCGTGGAAAAGGTTTCAACCGGGAAAGAAAAAGCTTCAACCGACAAGGAAAAAAGCTTCCACCAGGCGGCG
GCGTGATGATGATGTGCGAGCGGGGAGACGCGGCTGACGGCATGGCG--------------GTGCTACGACGGCGGCGGT
TAATTTTCTTCAACAATGAAGGGGTCGGGCGTCTTACGATGACGG--------------------------TG-TT-GCT
ACAAACGAGGGCGGGGTGCTGCTATGAGGTCT-TTCGCTCGAACCATCAAGCACGGGTGTTGCGAGGATGAAGATTGGCG
GCGGCGATGGTGACCGGAGATGAGGATGGCCGGCGACCAGCGGCGAGGACGCCCGACAAGGACACGGGAGCACGTGTGGT
CGGGGTATGG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>SNPs
-----S--S--------------------------------------------------------S--------------
----S--S--------S-----S-------------------------------SSS---S-------------------
-------------------------S---SSS------------------------------------------------
------------------S------------S------------------------S---------S-------------
------------------------S-------S---------S------------------------S---S--------
-S------S-------------------------S------------------------------S--------------
--------------------S------------------S--------------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-S-SSSSSSSSSSSSSSSSSSSSSSS
>forward_733
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------ACGTGGC
TAGCTTGCTTCTT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------
>reverse_2822
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------GACTCCTAGTTTCCGAAGACAGA
