>input_sequence_79703
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--------------------------------------------------------------------ATGTCTGCTAGC
CACAAGACCATTTTCATGAGGATACTTCTCATCTCTTGCATTCTGCTCCCCCTTGGGTTTCTATCTCTTGCACCACCTCT
ACCGGCAGCTAGCTCGAGGAGCGCACGAACGTCTGGATACATTGTTATCAGTGGTAATCTGCTTAAACTCTCAAT----C
TCTTGTCATGATGCTTCT-CCACAGCTTATGTAAGCTTTGACATGCTTTTGGCTATTATTAG--GAGATTGTGCCGCCAT
GTATTGCTTTGCATCATCAGTCTTCCAACATTCGCAGAATACATACATTTGTTACAAAACATACTGGAATCACTGATTTT
CTTGAAATAGATGTGCAGAGATGACATCTATGAACTGATACTGTTTACAGGTTGCAACAATTACTGCAGCGTGGCCTGCT
GCTACTGCAACATCCGCAGGTTTCCACCTGTTTGTGAAAAGTGCTGTGAGTAA---------------------------
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>chr7D_1_TraesCS7D01G351100
GGAGTTGTGCTTAATGATCAGGTGGCTGCTGCTATGGCTCAGGCAGGCACTAGTTTTCCTCTGAAAACCTTGTGAGTATC
CCTGCGTTCTTTAGAAACGACTCCTTGAAACACTGAAAGACACTAGTAGCACAGGCAAAAATCAAAAAATTC--TGAATA
CTAATCCGCATCCGCTTTTAACCGACTCACGACCCGTAGGAGAGGGGTGTACTTGTTGTAAAAAATGCGTGCATTCCGCT
CCTTCCAAATGGTTCAAACAGTCGTGTTCAAAAAAGAAAAAAAAAAGGCTCAAACAGTCA-------TCACACATATGCA
GTTCAGCTTCTTTCTATCTTTTTTTTT---GAACTAGCTTCTTTCTATCTTTGCCCTGAAGATCATCTCTCGTGGACATC
CACCAGGGGAGGGGACGAGGTCCTGATCAACCGATGGCAAGAGCTATGTGATTAA--------GTTCTCTGCTTGAGCTA
CACAAGAGCTATAGGTAATCAGCAGGCCCATTACTCATGGAACACCCTATGCCAATAAGGTAGTGAGAAAACACGATGGG
CTTTCTAATCTCTTATCTTATGGACTTTTACAGGATGAGGTGATATCATGCATGATGGACAGATTTGCAGATTCTACTCT
GTGTATTGGTTGTAATAACATCTTACATTATGGGACGGAGTGAGTAATCAACATTACTTTGGATTTCTAGCATTTTTGCA
CTTTGTAAACTGAACCGTTCTGCTCTCA-CCATTTCATCAGTGCGTTGATGCATGCAATATTACTGTGTTGGT--ACCAA
AACAATCAATCACACCTTACTTGCAGAAAATAACAACTCTACCTGGCAAGAGTATCCAAACCTCCTGACAAAAAGTTATA
TAGGCTTGGCAAAGGGAATGAGTTACTGATCTCCCTCTTCCTAACACTCACCTGCCAAAAAAGGACACCGAACAACCACG
TATATATACTAAGC--TGTCATCTTATGCCTGGTGTTGCTA---TCAGCTTAACCAATCAAGCTCAACATGTCTGCTAGC
CACAAGACCATTTTCATGAGGATACTTCTCATCTCTTGCATTCTGCTCCCCCTTGGGTTTCTATCTCTTGCACCACCTCT
ACCGGCAGCTAGCTCGAGGAGCGCACGAACGTCTGGATACATTGTTATCAGTGGTAATCTGCTTAAACTCTCAAT----C
TCTTGTCATGATGCTTCT-CCACAGCTTATGTAAGCTTTGACATGCTTTTGGCTATTATTAG--GAGATTGTGCCGCCAT
GTATTGCTTTGCATCATCAGTCTTCCAACATTCGCAGAATACATACATTTGTTACAAAACATACTGGAATCACTGATTTT
CTTGAAATAGATGTGCAGAGATGACATCTATGAACTGATACTGTTTACAGGTTGCAACAATTACTGCAGCGTGGCCTGCT
GCTACTGCAACATCCGCAGGTTTCCACCTGTTTGTGAAAAGTGCTGTGAGTAATACGAAGTCT-----------------
-------TCACTTCCTCCATCTTGGGAACAAGGCAGGAGATACTTCCGGTGTGCTGTCTCGGCATGATTTTGTAGTAAA-
--TACATCAGAAAGTCTGAGTTTCAACTACATGGAAACGCCTGAAAACCCTTAAGTTTCAGTTGTGCTGTATATTACTTT
TCCGATAACACATTAT-GTTTGTTACTTTGAAGCAACATGATCTGATTCTGGCAATA--------TCAAACCTACCCATG
GCAATTCTTGTTAAATAACAAACGATTTTAGGTTCAGTATACGCCAGAGTATCAGCAGCTCAGCAAGCATGGAAGATAAC
ATGACACAAGTAAAACAGTCATCACTAGTTAGCTTACTTCACCACCAAATGATTTGAAGATTACTTACCCACGGATAATA
CATGCATTAACTGATTTAA-CAACGAGTCCAGTAAGAACTAAA-CATTCTATGCTAGTGCTACAAGTAGAAGTTGCGAAT
GAAAACTTCTGTTCAAGGGGAAATAC-------------------------------TGTCCAATCTACATTTCTCTGTC
TGAGCTGTCCCTGAAGCGCCAAAGTAAACCTCCAATAATATTGTTTATGGAGTGAGAAGCCATTGGGACTATGATGCTTG
AGGAAGCTATGGTTGCTAAGCCATAGGCAAGGCCAACAAATGTTGCCCTGGAA--AGAAAAAAGATATTTACATATAAGA
GCACACACTAGTAAATTT--------------------------------------------------------------
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--------------------------GGGTGGTAACTCCCTCAAGATAAAAGGTGGTTGTTGGCATGTTTTAAGAACTGC
GAACAAATAGCCCTTACAC---CTTTTTTTCAGTTCTGCTAGACATGTTCGAAAGTACTGCAGGCAGAACGGTTACCAGA
TTGCAAATGAATATCTCCTGCCGTTGCCCAAGTGAAGAACACCGAAAAATACACCAGTTGCTAGAGCACTTATCCAATTC
AATCCAAAAATTGGCATCAATGCCCCTCGAAACAGGAACTCCTGATATCAAAAGTAGATACGAAGCTTTGTTCTCAAGAA
AATAAATATTCTTGA
>chr7B_1
GGAGGTGTGCTTAATGATCAGGTGGCTGCTGCTATGGCTCAGGCAGGCACTAGTTTTCCTCTGAAAACCTTGGGAGTATA
CCTGCGTTCTTTAGAAACGACTCCTTGAAACACTGAAAGACACTAGTAGCACAGGCAAAAATAATAAAAAAAATTGAATA
CTAATCCGCATCCGCTTTTAACCGACTCACGACCTGTAGGAGAGGGGTGTACTTGTTGTAAAAAATGCGTGCATTCCGCT
CCTTCCAAATGGTTCAAACAATCGTGTTCAAAAAAGAAAAGAAAAAGGCTCAAACAGTCATCACACATCACACATATGCA
GTTCAGCTTCTTTCTATCTTTTTTTTTTGAGAACCAGCTTCTTTCTATCTTTGTCCTGAAGATCATCTCTCGTGGACATC
CACCAGGGGA-----CGAGGTCCTGATCAACCGATGGCAAGAGCTATGTGATTAAGTATTTAAGTTCTCTGCTTGAGCTA
CACAGGAGCTATAGGTAATCAGCAGGCCCATTACTCATGGAACACCCTGTGCCAACAAGGTAGTGAGAAAACACGATGGG
CTTTCTAATCTCT-ATCTTATGGACTTTTACAGGATGAGGTGATATCATGCATGATGGACAGATTTGCAGATTCTACTCT
GTGTATTGGTTGTAATAACATCTTACATTATGGGACGGAGTGAGTAATCAACATTACTTTGGAGTTCTAGCATTTTTGCA
CTTTGTAAACTGAACCGTTCTGCTCTCACCCATTTCATCAGTGCGTTGATGCATGCAATATTACTGTGTTGGT--ACCAA
AACAATGAATCACACCTTACTTGCAGAAAATAACAACTCAACCTGGCAAGAGTATCCAAACCTCCTGACAAAAAGTTATA
TAGGCTTGGCAAAGGGAATGAGTTACTGATCTCCCTCTTCCTAACACTCACCTGCCAAAAA-GGACACCGAACAACTACG
TATATATACTAAGC--TGTCATCTTAAGCCTGGTGTTGCTA---TCAGCTTAACCAATCAAGCTCAACATGTCTGCTAGC
TACAAGACCATTTTCATGAGGATACTTCTCATCTCTTGCATTCTACTCCCCCTTGGGTTTCTTTCTCTTGCACCACCTCT
ACCCGCAGCTAGCTCGAGAAGCGCACGAACGTCTGGGTACATTGTTATCAGTGGTAATCTGCTAAAACTCTC--TCTCTC
TCTTATCATGTTGCTT-TTCCGCAGCTTATGTAAGCTTTAACACGCTTTTGGCTATTA---G--GAGATTGTGCCGCCAT
GTATTGCTTTGCATCATCAGTCTTCGAACATTCGTAGAATACATACATTTGTTACAAAACATAC-GGAATTACTGATTTT
CCTGAAATAGATGCGCGGAGATGACAGCTATGAACTGATGCTGTTTACAGGTTGCAACAATTACTGCAGCGTGGCCTGCT
GCTACTGCAACATCCACAGGTTTCCACCTGTTTGTGAAAAGTGCTGCGAGTAATATGAAGTCT-----------------
-------TCACTTCCTCCATCTTGGGAACAAGGCAGGAGATACTTCCGGCGTGCTGTCTCGGCATAATTTTGTA----A-
--TACATCTGAAAGTCTGAGTTTCAACTACATGGAAACGCCTGAAAACCCTTAAGTTTCAGTCGTGCTGTATATTACTTT
TCCGATAACACATTGT-GTTTGTTACTTTGAAGCAACATGATCTGATTCTGGCAATA--------TCAAACCTACCCATG
GCAATTCTTGTTAAATAACAAACGATTTTAGATTCGGTATACGCCAGAGTATCAGCAGCTCACAAAGCATGGAAGATAAC
ATGACACAAGTAAAACAGTCATCGCTAGTTAGCTTACTTCACCACCAAATGATTTGAAGACTACTTACCCACGGATAATA
CATGCATTAACTGATTTAAG-AACGAGTCCAGTAAGAACTAAA-CATTCTACGCTAGTGCTACAAGTAGAAGTTGCAAAT
GAAAACTTCTGTTCAAGGGGAAGTACTGTCCCTGAAGCTGCCAGAGTATCAGTAGTGTGTCCAAACTACATTTCTCTTTC
TGAGCTGTCCCTGAAGCGCCAAAGTAAGCCTCCAATAATATTGTTTATGGAGTGAGAAGCCATTGGGACTATGATGCTTG
AGGAAGCTATGGTTGCTAAACCATAGGCAAGGCCAACAAATGTTGCCCTGGAA--ACACAAAAGATATTTACATATAAGA
GCACACACTAGTAAATTTCCATGTCTCCTATGTTGTTTAATATAATGGCCGATATGTTGGCCATTATTATTGGCAGAGCC
AAGCAGCATGGTCAAGTGGAGGGGTTAGTTCCTCATCTAGTTGATGGAGGAGTATCCATCTTACAATACGCTGACGACAC
TGTCCTATTCATGGAACATGACATTGCTAAAGCGCGTAATATGAAACTTATTTTATGTCTCTTCGAACAATTGTCTGGTT
TAAAGATAAACTTTCACAAGAGTGAGCTGTTCTGCTTTGGGAAGGCCAAAGACGAGCAAGATACTTATAGATAATTGTTC
GGGTGTGAATTAGGTTCTTTACCATTTAGTTATTTGGGCATACCGATTCATCACCGTAAGTTATCTAATAAAGAATGGAA
GTGTATCGAAGATCGAATTGAGAAAAAACTGAGCTGCTGGAAGGGTAAGCTTATGCCTTATGGAGGTCGGCTAGTGCTGA
TTAATTCGGTATTGACTAGTATGCCGATGTTCCTATTATCGTTCTTCGAAATTCCGAAAGGGGTTCGGAAGCGACTTGAT
TTCTTTAGATCGCAGTTCTTCTGGCGGTCAGATGAGGCCAAGAGGAAGTACCGACTCGCGCGATGGGATATCCTTTGCCG
ACCAAAAGACCAGGGTGGTCTTGGTATTGAGAACTTAGAAATCAAGAACAAATGTCTTATGAGTAAATGGCTCTACAGGT
TAGAGACAGAGCCGGAGGGCATGTGCGCACAGATTTTGCGCAATAAATATTTGCAGTCCAAAACAATCGCTCAGGTTACC
ATGAGACCAACTGACTCGCCATTCTGGAAAGGGCTTATGAGGACGAAGGATTTATTCTTTCATAGGGTCAAATTCTTGGT
TGGCAATGGGATGTCAACAAGATTGTGGGAGGATACGTGGTTAGGAGAGGCGCCCTTAGCTCTCCAATATCCAACCCTTT
ATAACATTGTGCAACGTAAGGAGGAGTACGTAGGCACAATTTTCCAAACGATCCCCTTGAATATTCAGTTCAGACGTGCG
CTAATTGGTGAGCGATGGACAGCTTGGATGCACTTGGTTCGGAGATTGATAGATGTTCAACTCTCTGACCAACCAGATTC
GCCGCAATGGAAACTAGCTAAAAATGGAGTTTTTACGGTCAAATCATTTTATTTGGATTTGATTAATTTTGGCCCAATCT
CAAGATCGTTGCATATCTGGAGGATTAAGGTTCCCTTGTGTATAATTTTTTTATGTGGTTTGTCCGCAAGCAAGTAATAC
TCATCAAGGACAATCTAATTAAGAGGTGATGGGTAGGTAGCTCACATTGTTGTTTTGTGATCATGATGAAACAATACAAC
ATTTATTCATTGAATGCCCACTCGCCAAATTGCTTTGGAGAACGATTCATATAGCTTTCAACATTAACCCTCCAGTTGAC
ATTGAGCCGTTGTTTCGAATGTGGTTAGCTGGGGTTGAACATACTATTGCGGCTCGTATTCGGATTGAAATATGTGCGCT
TCTGTGGGATGGAACTGTCGGAATTACTTTATTTTTAACAGACAATACAATTTAATTTCTTGCAGGTTATCTTCAGAGCT
ACCGCTTGGATCCGTATGTGGTCCTTACTCACTCCTATGGACTCCAGGGAGCCTTTGGTTACTGGGTGCAACCAGTGGGA
GATGGTAGCACGGGCTATATTCAACCGGTTCGGATGGCGGTCGCATAACAGGATAGGACTCTAGGAACCTTATCCTACAT
ATTACCGTACCGTTTGTGATTGTCAGCATGTACTTTTCCGTTTTTCTTTTGCTTCGCTCCGCTTGTGAGCTGTAATACTT
TTGAGACTTTGTGCTACTTTGCATACTTTTAATAAGATGGCTGCATGCATCATTGTGATGCAGAGGCCGGGGGTAAACTT
CCATTTCCAAAAAAAAAAGTAAATTTGGGTGGTAACTCCCTCAAGATAAAAGGTGGTAGTTGGCATGTTTTAAGAACTGC
GAACAAATAGCCCTTACT----CTTTTTTTCAATTCTATTAGACATTTTCGAAAGTACAGTT-GGAGAACTGTTACCAGA
CTGCAAATGAATATCTCCTGCCATTTCCCAAGTGAAGAACACCGAAAAAGACACCAGTTGCTAGAGCACTTATCCAATTC
AATCCAAAAATTGGCATCAATGCCCCTCGAAACAGGAACTCCTGATATCGAAAGTAGACATGAAGGTTAGTTCTCAAGAA
AATAAATATTCTTGA
>chr7A_721
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--------------------TGCTCTCA-CCATTTCATCGGTGCGTCCTGCCATATTTACCATGTTTGTTTGAAAACCAA
AACAATCAGTCACACCTTGCTTGCAGGAATTAACAACTCTACCTGGCAAGAGTATCCAAACCTCTGGACAGAAAGTTATG
TAGGCTTGGCAAAGGGAATGAGTTACTGATCTCCCTCTTCCTAACACTCACCTGCCAAAAAAGGACACTGAACAACCACG
CATATATATAAGCTAGTATCATCTTAATCCTGGTGTTCCTATCGTCAGCTTAACCAATCAAGCTCAAGATGCCTGCTGGT
TGCAAGACCATTTTCATGAGGATACTTCTCATCTCTTGCATTCTGCTCCCCCTTGGGTTTCTTTCTCTTGCACCGCCTCT
ACCCGCGGCTAGCTCGAGGAGCGCACGAACGTCTGGATACATTGTTATCACTGGTAATCTGCTGAAACTCTC--T----G
TCTTATCATGATGCTT-T-CCGCAGCTTATGTAAGCTTTGACATGCTTTTGGCTATTA---GGAGAGATTGTGCCGCCAT
GTTTTGCTTTGCATCATCAGCCTTCAAACAGTCGTAGAATACATACATT-GTTACAAGTCATGCTGAGGTTACTGATTTT
CTTGA------------------------ATGAACTGATACTATTTACAGGTTGCAACAATTACTGCAGTGTGGCCTGCT
GCTACTGTAACATCCACAGGTTTCCACCTGTTTGTGAAAAGTGCTGCGAGTAATATCAAGTCTGTAAAACCGTATCAGGA
TGTGTCTTCACTTTGCCCATCTTGGGAACAAGACAGGAGATACTCCCGGTGTGCTGTCTTGGCATGATTTTGTAGTAAGT
AGTACATCGGAAAGTCTAAGT----------------------------------TTTCAGTTGTGCTGTATGTTACTTT
TCCAATAACACTGTTACGTTTGTTACTTTGAAGCAACATGATCTGAATATGACAATATCAGAGTATCAGACCCACCCATG
GCAGTTCTAGTTAAATAACATACGGTTTCAGGTTCGGTATAAGCCAGAGTATCAGTAGCTCAAAAAGCATGGAAGATAAC
ATGACACAAGTAAAACAGCTATCATTAGCTTAAT---TTCACCACCAAATGATTTGAGGACTACTTATCCACAGATAATA
CAGGCAGCAACTGAAGTAACCAACGAGTCCAGTAAGAACTAAAACAATCTATGATAGTGCTACATGTACAAATTGCAAAT
GAAAACTTTTGTTCAAGAGGAAGTAT-------------------------------TACCCAATCTATATTTTTCTTTC
TGAGTTGTCTCCGAAGCGCCAAAGTAAGCCTCCAATAATATTGTTTATGGAATGAGAAGCCATTGGGACTATGATGCTTG
AGGAAGCTATGGTTGCTAAACCATAGGCAAGGCCTACAAATGTTGCCCTGCAAACACAAAAAAGATATTTCGATATAACA
ACGCACAAT-----------------------------------------------------------------------
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-----------------AGTAAATTTGGGTGGTAATACCC-------------TGGTAATTGGCATGTTTTAAGAACTGC
GAACAAACCTATGGACCTTACACTTTTTTTCAATTCTACTAGACATGTTTGAAAGTACAGCGGGGAGAACGGTTACCAGA
CTGCAAATGAATATTTCCTGCCGTTGCCCAAGTGAAGAACGCCGAAAAATACACCAGTTGCTAGAGCACTTATCCAATTC
AATCCAAAAATTGGCATCAATGCACCTCGAAACAGGAACTCCTGATATCAAAATTAGACTTGAAGCTTTATTCTCGAGAA
AATAAATATTCTTGA
>SNPs
----S-------------------------------------------------------------------S------S
--------------------------------------------------------------S-S----SSS--------
----------------------------------S---------------------------------------------
--------------------S-------------------S---------------------------------------
----------------------------------S------------------S--------------------------
----------SSSSS-----------------------------------------------------------------
----S-------------------------------------------S------S------------------------
-------------S------------------------------------------------------------------
---------------------------------------------------------------S----------------
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--------------------------S-----------------------------------------------------
S-------------------------------------------------------------S-----------------
---S-----------------------------------------------------------S--------SS------
----S-----------S----S------------------------------------SSS-------------------
-------------------------S--------S-----------------------------------S---------
-------------S--S---------S-----------------------------------------------------
---------------S------------------------------S--------S------------------------
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--------S-----------------------------------------------------------------------
--------------S-----------------------------------------------------------------
-----------------------------------S--------------------------SS----------------
------------------------------------------------------------S-------------------
----------------------------------------------------------------------------S---
----------------------S------------------------------------------------------S--
---------------------------S----------------------------------------------------
-------------------S------------------------------------S-----------------------
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---------------------------------------------------------S----------------------
-----------------SS-------------S----S--------------------S--S--S---------------
S-------------------------------------------------------------------------------
----------------------------------------------------------S-S-------------------
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>forward_411
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------------------------------------------------------------------------TGGACATC
CACCAGGGGAG---------------------------------------------------------------------
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>reverse_1260
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-----------------------------------------------------------TAGGAGATTGTGCCGCCATG-
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>forward_1124
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----------------------------------------------------------------CTCTTGCACCACCTCT
ACCG----------------------------------------------------------------------------
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>reverse_2078
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-----------------------------------------------------------------------------GTC
TGAGCTGTCCCTGAAGC---------------------------------------------------------------
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