>input_sequence_79675
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--------------------------------------------------------------ATGGAGGACTTCTACTAC
TTCCCCAGCTCCCTGGAGACCTCTGAAATTGTCCACAGAGGGTTCCTCCCCGTCGTGCACTCCTCCCCCCGCAACCGGAG
CTCGCCGTCGCCGAGGCCCCGGCGCGGGTCCCGTGACGACGCCGGCGAGCTCGGGCACCACTACCTCGACGCCTGCTTCC
GGTGCGGGCGGACAATCGCTGGAAACAAGGACATCTTCATGTACAGGTAAACATC-TTACGCCGTCATGCGCTGGGGTTT
GACTGCGATGGTGGCATGTGTAAACGTGATTCTTTGCTGGCGCAGAGGCGACACCCCGTTCTGCAGCGAGGAGTGCCGGC
AGCAGCAGATCGACACCGACGAGGCGGCGGAGAAGAGATCCAAGAAGTCCGCGGCCGCGACGACGACGGAGCAGCAGTCG
CAGCGGCAGAGCCCGCACAGAGTGCCCGTCTGGGCTCGGTAG--------------------------------------
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>chr6A_1_TraesCS6A01G262000
GACCTTCCGTGCACTACTCTTCCTAACTGTCGGCGATGTGCGAGCTTCGTGGTCGTCGTGGCGGGGCACGGACTCGGCGA
TTTCCTCCTCCTTGTCGTCGGTCTCGGCAAACACCACCTCGCCCGCCTCATCTTCGCACTGCCAGCGGCCGCCACGTCCG
CCACCTGCTGCCGGTATCGCCAGCGGGCTAGGCGGAGCAGTAGGATTCGAGCAGTGCCTCCTGCTCCGCCATATTCGCGT
CTGGCGCGACCGCTCTGCCGGCGGTGAGATGCTCTTGGAGGAGGTGGTGGTTGTGGGAGGCATCGGCCTGCGCTTCCCGA
AACTGCTCCTCCTGCTCCTCCCGCACCATGTCCATGTAATGGACACGGGCCTCGCCGATGGTTATGGTGCAATGCACCGG
CGACGGGGGCACAGAGGAGGAGGAAGGTGGCTCGGAGGAGGAGGATAGTGGCGTCGTTTCATCGTCGGAAGTGTCCTCCA
TTGGTCCGTAAAGCCCCCATATTTGTCTCCGCTTGTGGGAGAAATCGCGTTCGGACCGCTCCACGGACCGATACTAGCCC
GCCTTGGATGGCTTCCGCTGTCAGGACAGCACGGTCCGGACGCGTGTGAGAGGTTTGTGTGTCGGTGTTGAAGATGTCCG
GATGATTTCATGCTTTTATGTTTTTCAGTT-----TAAATACAGTAAATTATGTGCATGTGCATGGCAAGTAATGTAGTG
TCTCCGCCACAGGATAGGCGTACGTGCATCTATGTGTTTGATATACGC-------------AAAGAAAGAAAGAAAG-AA
AGAACTACTCCAACTATGCAGCCGTACAGGATGTCAGGATCACGCCGGGATCCCGCACGAAACCCAGGGTCCAAAACGAA
AAGCACACACTTCCCCTGCCATGCGGCCCTTTATAACCCGCGCTCCTCTCCCCGCCAAACTCCACCA---CCTCCTTCCT
CCTTCCTCCCAACCAACCGAGCAACAAGGAGGGAGCTAGACGGACACCAACCGAGCCTGGAAATGGAGGACTTCTACTAC
TTCCCCAGCTCCCTGGAGACCTCTGAAATTGTCCACAGAGGGTTCCTCCCCGTCGTGCACTCCTCCCCCCGCAACCGGAG
CTCGCCGTCGCCGAGGCCCCGGCGCGGGTCCCGTGACGACGCCGGCGAGCTCGGGCACCACTACCTCGACGCCTGCTTCC
GGTGCGGGCGGACAATCGCTGGAAACAAGGACATCTTCATGTACAGGTAAACATC-TTACGCCGTCATGCGCTGGGGTTT
GACTGCGATGGTGGCATGTGTAAACGTGATTCTTTGCTGGCGCAGAGGCGACACCCCGTTCTGCAGCGAGGAGTGCCGGC
AGCAGCAGATCGACACCGACGAGGCGGCGGAGAAGAGATCCAAGAAGTCCGCGGCCGCGACGACGACGGAGCAGCAGTCG
CAGCGGCAGAGCCCGCACAGAGTGCCCGTCTGGGCTCGGTAGAAGCGTCCATGG--------ATCAAATGGCCTACTGTG
CTCGACACTCCTC--CGTCCATATAGGCTTCAGGATTGTGGATGTATGCGGACCGACGTGATATGAGCAGCTTGAGGGAG
CTGGTTATATTCCATATTGGAATACAGTTCTTGGAGGCAAAAGAAGATCGTCTCGTCTGGAAACGCTCATTATATGTGTG
ATTAACATGCTTTCTTCCTTGTGTGCGATCCCCATGTAGTCCAAAATTTTGGCATGGAAGAAATAAGATCACCGAGGCTC
CCATCCATGGCGATTGTGTCCGGTCTGATGTTGAAATACTATTATTTTTTTAATTCACTTACTAGTTCCGTGTCACATGC
ATGACGAATTTACAGGGAGA--CAGGTTTGCAACGAGTAACTGTACCACCAGAGTTGAAGAAATCCAACCATTATTCCCT
CTCATGTGTCACCTTCATGTCCAGACTGGATTTCGTGTTTTTTTTTTCACTCAACGAACATGCCGAAGCTCATGGTCGTT
GTATACGCACAGGAGGGCCGTATCATCTAGCCGTATTATTCGCATTATTCTACACTG-----------------------
--------------------------------------TATATAACCGTATGATTCATGTCCACTGCAGTGTTAT--TAT
TTTATTTTAATTTATTTTTTTGCGAATCATTGCAGTGTTGTTAAGCTAGCAGCCTGGCTGGCATATATATACACATATAT
GTCGATTTTCTGCAAAAGAATAC-------ATACATGTCACTTCAGGCGTTCCACGAGTTCAATTGAAAAT------ACA
TCGTATCAGGATACAGACGAGTGAGAATAGCACATAATTTCTCAGCAACAATCCATCACTGCGATTTAGCTGAAAAGTAC
CCTTTGATTGGACTGGACGGGTTAGAAGCAAGACCGGGGCAAAGCCCGTGTGATTAGTACGGAGGGCACACCACCATCGG
AATCCGCAACATTGCACGACTACACTTTGCTCGCACCTAAAAGCGCCATC----GGAGCACTTATCAAAGTGGACTTTGG
AGTTAACAAACCGG
>chr6D_642
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-ATGATTTCATGCTTTTATGTTTTTCATCAGTTTATAAACACACTAAATTATGTGCATGTGCATGGCATGTAATGTATTG
TCTCCGCCATAGGGTAGGCGTACGTGCATCTAGGTGTTTGATATACGC-------------AAAGAAA---------AAA
AAAACTACTCCAACTATGCAGCCGTGCAGGATGTCAGGATCACGCCGGGATCCCGCACGAAACCGAGGGTCCAAAACGAA
AAGCACACACTTCCCCTGCCATGCGCCCCTTTATATCCCGCGCTCCTCTCCCCGCCAAACTCCACCACCTCCTCCTTCCT
CCCAAGTCCCAACGAACTCAGCAACAAGGAGGGAGCTAGACGAACACCAACCGAGCCAGGAAATGGAGGACTTCTACTAC
TTCCCCAGCTCCTTGGAGACCTCTGAAATTGTCCACAGAGGGTTCCTCCCCGTCGTGCACTCCTCCCCCCGCAACCGGAG
CTCGCCGTCGCCGAGGCCCCGGCGCGGGTCCCGCGACGACGCCGGCGAGCTCGGCCACCACTACCTCGACGCCTGCTTCC
GGTGCGGGCGGACAATCGCTGGAAACAAGGACATCTTCATGTACAGGTAAACATC-TTACGCCGTCATGCTCT-GGGTTT
GACTGTGATGGTGGCATGTGCAAACGTGATTCTTTGCTGGCGCAGAGGCGACACCCCGTTCTGCAGCGAGGAGTGCCGGC
AGCAGCAGATCGACACCGACGAGGCGGCGGAGAAGAGACCCAAGAAGTCCGCGGCCGCGACGACGACGGAGCAGCAGTCG
CAGCGGCAGAGCTCGCACAGAGTGCCCATCTGGGCTCGGTAGAAGCATCCATCGATCGATCTATCAAATGGCCTACTATG
CTCGATGCTACTC--CATCCGTATAAACTTCAGGATTGTGGATGTATGCGGACCGACGTGACATGAGCAGCTTGAGGGAG
CTGGTTATATTCCCTATTGGAATACAGTTCTTGGAGGCAAAAGAAGATGGTCTCGTCTGGAA-CGCTCACTATATGTGTG
ATTAACATGCTTTCTTCCTTGTGTGCGATCCCCATGTACTCCAAAATTTTGGCATGGAAGAAATAAGATCACCGAGGCAA
CCATCCATGGCGACTGTGTCCGGTCTGGTGTTGGAATACTATTA-TTTTTTAATTCACTTACTAG-TCCGTGTCACATGC
ATGATGAATTTACAGGGAGA--CAGGTTTGCAACGAGTAACTGTACCACACCAAGTTACAAAATCCAACCATTATTCCCT
CTCATGTGTCACCTTCATGTCCAGACTGGATTTCGTGT-GTTTTTTTCACTCAACGAACATGCCGAAACTCATGGCCGTT
GTATACGCACAGGAGGGCCGTATCATCTAGCCGTATTATTCGCATTATTCTACACTAACATATATATATATATATATATA
TATATATATATATATATATATATATATATATATATATATATATAACCGTATTATTCATGCCCACTGCAGTGTTATC--AT
TTTATTTTAATTTACTTTCTTGTGAATCATTGCAGTGT--TTAAGCTAGCAGCCTGGCTGGCATATATAT-CACATATAT
GTCGATTTTCTGCAAAAGAATAC-------ATACATGTCACTTCACATGTTCCACGAGTTCAATTGAAAAT------ACT
TCGTATCAGGATGCTGACGAGTGAGAATAGCACATAATTTCTCAACAACAATCCAGCACTGTGATTTAGCTGAAAAGTAC
CCTTTGATTGGACTGGACGGATTAGAAGCAAGACCGGGGCAAAGCCCGTGTGATTTGTACGGAGGGCACACCACCATCAG
AATCCGCAACATTGCACGACTACACTTTGCTCGCACCTAAAAGCACGAACCATTGGAGTACTTATCAAAGTGGACTTTGG
AGTTAACAAACCGG
>chr6B_642
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-ATGATTTCATGCTTTTATGTTTTTTAGTT-----TAAACACACTAAATTATGTGCATGTGCATGGCATGTAATGTAGTG
TCTCCGCCACTGGATAGGCGTACGTGCATCTAGGTGTTTGATATACGCTACACAAAGAAAGAAAGAAAGAAAGAAAGAAA
AGAACTACTCCAACTACGCAGCCGTACAGGATATCAGAATCACGGCGGGATCCCGGACGAAACAGAGGGTCCAAAACGAA
AAGCACACACTTCCCCTGCCATGCGCCCCTTTATAACCCGCGCTCCTCTCCCCGGCAGACTCCACAACCTCCTCCT----
---TCCTCCCAACCAACCCAGCAACAGGGAAGGAGCTAAACGGCAACCAACCGAGCCAGGAAATGGAGGACTTCTACTAC
TTCCCCAGCTCCTTGGAGACTTCTGAAATTGTCCACAGAGGGTTCCTCCCCGTCGTGCACTCCTCCCCCCGCAACCGGGG
CTCGCCGTCGCCGAGGCCCCGGCGCGGGTTCCGTGACGACGCCAGCGAGCTCGGCCACCACTACCTCGATGCCTGCTTCC
GGTGCGGGCGGACACTCGCTGGAAACAAGGACATCTTCATGTACAGGTAAACATCTTTACGCCGTCATGCGCT-GGGTTT
GACTGTGATGGTGGCATGTGTAAACGTGATTCTTTGCTGGCGCAGAGGCGACACCCCGTTCTGCAGCGAGGAGTGCCGGC
AGCAGCAGATCGACACCGACGAGGCGGCGGAGAAGAGATCCAAGAACTCCGCGGCCGCGACGACGACAGAGCAGCAGTCG
CAGCGGCAGAGCTCGCACAGAGTGCCCGTCTGGGCTCGGTAGAAGCATCCATCGATCGATCTATCAAATGGCCTAATATG
CTCGATGCTACTCTCCATCCATACAAACTTCAGGATTGTGGATATATGCGGACCGACGTGATATGAGCAGCTTGAAGGAG
CTGATTATATTCCCTATTGGGATACAGTTCTTGGAGGCAAAAGAAGATCGTCTCGTCTGGA-ACGCTCATTATATGTGTG
ATTAACATGCTTTCTTCCTTGTGTGCGATTCCCATGTAGTCCAAAATTTTGGCATGGAAGAAATAAGATCACCGAGGCTC
CAATCCATGGCGATTGTGTCCGGTTTCATGTTGAAATG---TTTTTTTTTTACTTCACTTACTAG-TCCGTGTCACATGC
ATGAGGAATTTACAGGGAGTGGCAGTTTTGCAACGAGTAGCTGTACCACCAG-GTTGACAAAATCCAACCATTATTCACT
CTCATGTGTCACCAG---GTCCAGACTGGAATTTATGG-TTTTTTTTCCCTCAACGAACAGGCCGAAACTCATGGTCGTT
GTATACGCACAGGAGGCCGTATC---------------------------------------------------------
---------------------------------------ATCTAATCGTATTATTCATGTCCACTGTACTAGTGTTGTTA
TTTATTATATCTTATTTTATTGCG-ATCTTTGCGATGTTGTTAAGCTAACAGCCTAGCTGGCATAC----ACACATATAT
GTGGATTTTCTGCGAAAGAATACTGAATACATACATGTCACTTCACGCGCTCCACGAGTTCAATTGAAAATATATACACT
TCGTATCAGGATACAGAGAGTCAGA---AGCACATAATTTCTCAACAATTGAGCTAAAAAGT------------AAGTAC
CTTATGATTGGACGGTTCAGAGGCACGACGAAAGAGACCGCAAGCCAGTGTGATTTGTACGGAGTCA----CACCTTCGG
AGTCCGTAACATTGGTGAACTACACTTTACC-----------GCGCCATC----GGAGTACTTATCAAAGTGGACTTTGG
AGTTAACAAACCGG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S--------------------------------------S---S------------------------S-----------
--------------------------------S-----------------------------------------------
----------------------------------------------------------------S---------------
-------------------------S------------------------------------------------------
--S---------------S--------------------------------------S----------------------
------------S-------------------------------------------------------------------
------------------------------------------------------S-------------------------
-------------------------------------------------------------------------S------
-----S--------------------------------------------------------------------------
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------------S---------------------------------S-----S------------------------S--
-----SS--S------S--------SS-----------------------------------------------------
-------------S------------------------------------------------------------------
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-----------------------------------------------------------------S--------------
----S-----------------------------------------------------SS--------------------
--------------------------------------S----------------------------S------------
--------------------------------------------------------S-----------------------
---------------------------------------------------S----------------------------
------------------S-------------------------------------------------------------
---------------------------------------------S---------------------------------S
--------------------------------------------S----------S-----S------------------
--------------------S----------------------------------S------------------------
----------------------------------------------------------S---------------------
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>forward_496
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----------------------------------------------------------------------------TCCA
TTGGTCCGTAAAGCCC----------------------------------------------------------------
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>reverse_2365
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--------------------------------------------GCAACAATCCATCACTGCGA----------------
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