>input_sequence_79663
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--ATGGCGCCGAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGTGGAGGAGGAGCCCGCGGCGGAGAAGGCCGAGAAG
GCGCCCGCCGGGAAGAAGCCCAAGGCCGAGAAGCGTCTTCCCGCGGCGGGCAAGACCTCCGCCAAGGA---CGGCG---A
CAAGAAGGCCAAGAAGAAGAGCAAGAAGAGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTGCACC
CCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAG
GCCGCCAAACTCGCGCGCTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGTCCGCCTCGTCCTCCC
CGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAAG-CCGTCACCAAGTTCACCTCCTCCTAG------------
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>chr5B_1_TraesCS5B01G389100
GTCCG-TCTCCGGTGGCCTTAGGGCCATGGAGACGAAGTGGATCTCAGCCTTTGCCGGTGGGAGGGCTCCGTTTTTAGAT
C-TTT--TTTCAAGCTTTGTTAAGGTTTGTATCCTGCTCAGGAAGGCGAGACGGCGGCGCCTCCCTGAAGATGGAATAAA
GGTCTCCCTGCCTAG-CCCCGTTCCGGTGATGCGTTTAGCATCATCGGTGGGCGTGTGGAGGTGTGTCTCCGGCGGATCT
GTCTTTGGTGGATTTGCTCGGATCTGTTCGTCGTTTGTGTTCGTTTGTGTGTCCTCAGGTTGGATCCTTTTGATCTACAC
TCTTCATCTGCGGCGGTTACTGTTCTGGTGTGTTGGTTCTATGGAGCCTTAGCACGACGACTTCCCGACTGTCTACTACA
ACAACGT-TTGCCCGGCTCCGGCGAGGGAGGGGCGATGACAGCGGCGCGCCTTCGGCTCGCTTCAGTGCTTGTAGTCGTC
GCTAGGTGGTCTACGGATCTGGATGTAATTTTTTATTATTTTCAGTATTCGTTGTACTACCATGATTGAAGATGAATAGA
TTGGAAGTTTTTTCCGCAAAAAAAAGAAAAGAATGATTGACAACATTTCTTTGTGAAACGCTGAAAGGCAGTCGTGGAAG
ACAAAAAAAAAGAAAAAGACACTGCGGACCGCGGCACATGAGTCGCGCTCAGAACACTTGCCCGTCCATTTTATCGTGAG
AATGTTTCTTTTCCGATCGTCCCGCCAACAATTCATTTTCCTTTTCCGATCC-CGCCCATAAATCCCGCCATGCCCACCG
ATCCGCGCCCC----------GCCCGTCCATCCAAAGCGGCGCGAACCGCCTCACACCGCTCCACGTCAACGATCCGCGG
CACCAGCCCCTCCGCCAATCAGCGCCCACCGCCTC-CCACCTAT-AAATCCACCG-CCCCCTCCTCCCCCTCTCCCCACC
GCAGC--CCAAATTCCCCAATCTCCTCCCGC-ACTC-------AACCCAATCC-CCACCTACCCG---CAC--------C
CCATGGCGCCGAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGTGGAGGAGGAGCCCGCGGCGGAGAAGGCCGAGAAG
GCGCCCGCCGGGAAGAAGCCCAAGGCCGAGAAGCGTCTTCCCGCGGCGGGCAAGACCTCCGCCAAGGA---CGGCG---A
CAAGAAGGCCAAGAAGAAGAGCAAGAAGAGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTGCACC
CCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAG
GCCGCCAAACTCGCGCGCTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGTCCGCCTCGTCCTCCC
CGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAAG-CCGTCACCAAGTTCACCTCCTCCTAGGTTCGCCCGCCC
CCCCTCATGGTGACCGCTGTTGATCCCCTGC-TGGATCTGCCTGCCTATCTAGATATATATAGTAGTATTAG---TAGTG
CTTGATGGAAATCGTTGGACGGATGATGGTTCGTGTGTAGTCGTCGGTGG-TTGTAAGATGATGTTCCCGTGGTGCTACT
TTTGCGTAGTCGATCTGAATATTAATGGAACAAAAATCTGCTACTCTGAGTTTCTGATGAATTGTTTCAAGAGTAGTTAT
ATTTGACATCCTGTTTGTGCTATTCTTGAT-----------------------------TAGTTTGAGATGGTTATATGA
TTTTGATCCGACCTGTTGTGCACCGTGGGTGTTAGTTTACATCGTTCTGTTGTTCCTGGTCATAGATTGAATCAAGTTAG
ACCCAATTGGGGTGTGAATCAAGTTAGACCCAATTGGGGTGTGAATCAAGTTAGACCCAATTGGGGTGTTACAATTGGTT
GATCTGAATGTTAATGAAATCATATCAGCTACTCGGAATTTGTGATGT------ATCATATTAAGAGTAGTTATGTACTT
ATCTCTGACATCCTTATCAAAACTACTAGTCATA----------------------------------------------
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--------------------TCTTGCCATTGGCAGTACCCATATTAATGGGCTAT--TTGCCCCGTGAGCTTACTGCTGG
TAACCTGCAGGAATACTGGTATACAGTGGAAAGCATCTCAGCTCAGTGCT---TATCTCTTGATTTGGAGTGC---CTTC
TTTTGCATGCGTACAAACAAAGCAGCCTGTCTTT-----------TGT-----------TGATTGTTTGTTACAGAAAGT
TCCATTTGCTTGCAGAATT---AATACCTACTGCTTGCTAGAAATTGGTTGCATGTGGGATGTGTGTAGCATCAGATTGT
AAGTAGTAGTATGAAGTAGCATCCGTAGCAGGATGTAACATTGTAACTTGACTATAGTGCTGGAAGTAATCATCCTACGG
CCTTGTTCGGTTAAACCCCTCCCAAGGGAACTGAAGGGGGTTTGGGGTATTTTTTCCCTCTAAACCGAACAAGCCTACAT
GATGAAT
>chr5B_1
GTCCG-TCTCCGGTGGCCTTAGGGCCATGGAGACGGAGTGGATCTCAGCCCTTGCCGGTGGGAGGGCTCCGTTTTTAGAT
C-TTT--TTTCAAGCTTTGTTAGGGTTTGTATCCTGCTCAGGAAGGCGAGACGGTGGCGCCTCCCTGAAGATGGAATAAA
GGTCTTCCCGCCTAGCCCCCGTTCCGGTGATGCGTTTAGCATCATCGATGGGCGTGTGAAGGTGTGTCTCCGGCGGATCT
GTCTTTGATGGATTTGCTCGGATCTGTTCATCGTTTGTGTTCGTTTGTGTGTCCTCAGGTTGGA-CCTTTTGATCTACAC
TCTTCATCTGCGGCGGTTGCTGTTCTGGTGTGTTGGTTCTATGGAGCGTTAGCACGACGACTTTCCGACTGTCTACTACA
ACAATGT-TTGCCCGGCTCCGGCGAGGGAGGGGCGATGACAGCGGCGCGCCTTCGGCTCGCTTCAATGCTTGTAGTCGTC
GCTAGGTGCTCTACGAATCTGGATGTAATTTTTTATTATTTTCAGTATTCGTTGTACTATCATGATTGAAGATGAATAGA
TTAGAAGTTTTTCCCGAAAAAAAAA-------------------------------------------------------
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>chr5B_1
GTCCTGTCTCCGGTGGCCTTAGGGCCATGGAGACGGAGTGGATCTCAACCCTTGCCGGTGGGAGGGCTTCGTTTTTAGAT
C-TCT--TTTCAAGCTTTGTTAGGGTTTGTATCCTGCTCAGGAAGGTGAGACGGCGGCGGCTCCCTGAAGATGGAATAAA
GGTCTCCCCGCCTAGCCCCCGTTCCGGTGATGCGTTTAGCATCATCGGTGGGCGTGTGGAGGTGTGTCTCCGAA-GATCT
GTCTTTGGTGGATTTGCTCGGATCTGTTCGTCGTTCATGTTCGTTTGTTTGTCCTCGGGTTGGATCCTTTTGATCTACAC
TCTTCATCTGCGGCGGTTGCTGTTCTGGTGCGTTGGTTCTATGGAGTCTTAGCATGACGACTTCCCGACTGTCTACTACA
ACAATGT-TTGCCCGGCTCCGGCGAGGGAGGGGCGATGACAGCGGCGCGCCTTCGGCTCGCTTCAGTGCTTGTAGTCGTC
GCTAGGTGGTCTACGGATCTGGATGTAATTTTTTATTATTTTCAGTGTTCGTTGTACTACCATGATTGAAGATGAATAGA
TTGGAAGTTTTTCCCGCAAAAAAGAAGA----------------------------------------------------
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>chr3B_3
--CCG-TCTCCGGTGGCTTTAGGGCCATGGAGACGGAGTGGATCTCAGCCCTTGCCGGTGGGAGGGCTCCGTTTTTAGAT
--TTT--TTTCAACCTTTGTTAGGGTTTGTATCCTGCTCAGGAAGGCGAGACGGCGGCGGCTCCCTGAAGATGGAATAAA
GGTCTCCCCGCCTAGCCGCCGTTCCGGTGATGCGTTTAGCATCATCGGTGGGCGTGTGGAGGTGTGTCTCTGGCGGATCT
GTCTTTGGTGGATTTGCTCGGATCTGTTCGTTGTTCGTGTTCGTTTGTGTGTCCTCAGGTTGGATCCTTTTGATCTACAC
TCTTCATCTGCGGCGGTTGCTGTTCTGGTGTGTTGGTTCTATGGAGCCTTAGCACGACGACTTCCCGACTGTCTACTACA
ACAACGT-TTGCCCGGCTCCGGCGAGGGAGGGACGATGATAGCGGCGCGCCTTCGGCTCGCTTCAGTGCTTGTAGTCGTC
GCTAGGTGGTCTACGGATCTGAATGTAA-TTTTTATTATTTTCAGTGTTCGTTGTACTACCATAATTGAAGATGAATAGA
TTGGAAGTTTTTCCCGCAAAAAAAA-------------------------------------------------------
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>chr1B_3
--CCG-TCTCCGGTGGCCTTAGGGCCATGGAGACGGAGTGGATCTCAGCCCTTGCCGGTGGGAGGGCTCCGTTTTTAGAT
--TTTTTTTTCAACCTTTGTTAGGGTTTGTATCCTGCTCAGGAAGGCGAGACGGCGGCGGCTCCCTGAAGATGTAATAAA
GGTCTCCCCGCCTAGCCGCCGTTCCGGTGATGCGTTTAGCATCACCGGTGGGCGTGTGGAGGTGTGTCTCTGGCGGATCT
ATCTTTGGTGGATTTGCTCGGATCTGTTCGTCGTTCGTGTTCGTTTGTGTGTCCTCAGGTTGGATCCTTTTGATCTACAC
TCTTCATCTGCGGCGGTTGCTGTTCTTGTGTGTTGGTTCTATGGAGCCTTAGCACGACGACTTCCCGACTGTCTACTACA
ACAACGT-TTGCCCGGCTCCGGCGAGGGAGGGGCGATGATAGCGGCGCGCCTTCGGCTCGCTTCAGTGCTTGTAGTCGTC
GCTAGGTGGTCTACGGATCTGGATGTAA-TTTTTATTATTTTCAGTGTTCGTTGTACTACCTTAATTGAAGACGAATAGA
TTGGAAGTTTTTCCCGCAAAAAAAAAAAAA--------------------------------------------------
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-------
>chr4B_3
--CCG-TCTCCGGTGGCCTTAGGGCCATGGAGACGGAGTGGATCTCAGCCCTTGCCGGTGGGAGGGCTCCGTTTTTAGAT
ATTTTTTTTTCAACCTTTGTTAGGGTTTGTATCCTGCTCAGGAAGGCGAGACGGCGGCGGCTCCCTGAAGATGGAATAAA
TGTCTCTCCGCCTAGTCCCCGTTCCGGTGATGCGTTTAGCATCATCGGTGGGTGTGTGGAGGTGTGTCTCCGGCGGATCT
GTCTTTGGTGGATTTGCTC-GATCTGTTCGTCGTTCGTGTTCGTTTGTGTGTCCTCAGGTTGGATCCTTTTGATCTACAC
TCTTCATCTGCGGCGGTTGCTGTTCTGGTGCGTTGGTTCTATGGAGCCTTAGCACGACGACTTCCCGACTGTCTACTACA
ACAACGT-T-GCCCGGCTTCGGCGAGGGAGGGGCGATGACAGCGGCGCGCCTTCGGCTCGCTTCAGTGCTTGTAGTCGTC
GCTAGGTGGTCTACGGATCTAGATGTAATTTTTTATTATTTTCATTGTTCGTTGTACTACCATGATTGAAGATGAATAGA
TTGGAAGTTTTTCCCGCAAAAAAAAG------------------------------------------------------
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>chr7B_3
--CCG-TCTCCGGTGGCCTTAGGGCCATGGAGACGGAGTGGATCTCAGCCCTTGCTGTTGGGAGGGCTTCATTTTTAGAT
C---TTTTTTCAAGCTTTGTTAGGGTTTGTATCCCGTTCAAGAAGGCGAGACGGCGGCGGCTCCCTGAAGATGGAATAAA
GGTCTCCCCACCTAGCCCCCGTTCCGGTGATGCGTTTAGCATCATCGGTGGGCGTGTGGAGGTGTGTCTCCGGCGGATCT
GTCTTTGGTGGATTTGATCGGATCTGTTCGTCGTTCGTGTTCGTTTATGTGTCCTTAGGTTGGATCCTTTTGATCTACAC
TCTTCATTTGCGGCGGTTGCTGTTCTGGTGTGTTGCTTCTATGGAGCCTTAGCACGACGACTTCCCGACTGTCTACTACA
ACAACGT-TTGCCCGGCTCCGGCGAGGGAGGGGCGATGATAGCGGCGCGCCTTCGGCTCGCTTCAGTGCTTGTAGTCGTC
GCTAGGTGGTCTACGGATCTGGATGTAA-TTTTTATTATTTTCAGTGTTCGTTGTACTACCATGATTGAAGATGAATAGA
TTGGAAGTTTTTCCCGCACAAAAAAAAAGAAAGAT---------------------------------------------
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>chr2B_3
--CCG-TCTCCGGTGGCCTTAGGGCTATGGAGACGGAGTGGATCTCAGCCCTTGCCGGTGAGAGGGCTTCATTTTTAGAT
C---TTTTTTCAAGCTTTGTTAGGGTTTGTATCCTGCTCAGGAAGGCGAGACGGCGGCGGCTCCCTGAAGATGGAATAAA
TGTCTCCCCGCCTAGCCCCTGTTCCGGTGATGCGTTTAGCATCATCGGTGGGCGTGTGGAGGTGTGTCTCCGGCGGATCT
GTCTTTGATGGATTTGCTCGGATCTGTTCGTCGTTCGTGTTCGTTTGTGTGTCCTCGGGTTGGATCCTTTTGATCTACAC
TCTTCATCTGCGGCGGTTGCTGTTCTGGTGCGTTGGTTTTATGGAGTCTTAGCACGACGACTTCCCGACTGTCTACTACA
ACAACGTTT-GCCCGGCTCCGGCGAGGGAGGGGCGATGACAGCGGCGTGCCTTCGACTCGCTTCAGTGCTTGTAGTCGTC
GCTAGGTGGTCTAAGGATCTGGATGTAATTTTTTATTATTTTCAGTGTTCGTTGTACTATCATGATTGAAGATGAATAGA
TTGAAAGTTTTTCCGAAAAAAAAA--------------------------------------------------------
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>chr6B_3
--CCG-TCTCCGGTGGCCTTAGGGCCATGGAGACGGAGTGGATCTCAGCCCTTGCCGGTGGGATGGCTCCGTTTTTAGAT
C---TTTTTTCAAGCTTTGTTAGGGTTTGTATCCTACTCAGGAAGGCGAGACGGCGGCGGCTCCCTGAAGATGAAATAAA
TGTCTCCCCGCCTAGCCCCTGTTCCAATGATGCGTTTAGCATCATCGGTGGGCATGTGTAGGTGTGTCTCTGGCGGATCT
GTCTTTGGTGGATTTGCTCGAATCTGTTCGTCGTTCGTGTTCGTTTGTGTGTCCTCAAGTTGGATCCTTTTGATCTACAC
TCTTCATCTACGGCGGTTGCTGTTCTGGTGCGTTGGTTCTATGGAGCCTTAGCACGACGACTTTCCGACTGTCTACTACA
ACAAGGTTT-GCCCGGCTCCGGCGAGGGAGGGGCGATGACAGCGGCGCGCCTTCGGTTCGCTTCAGTGCTTGTAGTCGTC
GCTACGTGGCCTACGGATCTGGATGTAATTTTTTATTATTTTCAGTGTTCGTTGTACTACCATGATTGAATATGAATATA
TTGAAAGTTTTTTCCGCAAAAAAAAGAAGAAG------------------------------------------------
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>chr3B_8
--------TCCGGTGGCCTTAGGGCCATGGAGACGGAGTGGATCTCAGACCTTACCGGTGGGAGGGCTCCGTTTTTAGAT
C---TTTTTTCAAGCTTTGTTAGGGTTTGTATCCTGTTCAGAAAGGTGAGACGGCGGCGGCTCCCTGAAGATGGAATAAA
GGTCTCCCCGCCTAGCCCCCGTTCCGGTGATGCATTTAGCATCATCGGTGGGTGTGTGGAGGTGTGTCTCCGGCGGATCT
GCCTTTGGTGGATTTATTCGGATCTG-TCGTCGTTCGTGTTCGTTTGTGTGTCCTCAGGTTGGATCCTTTTGATCTACAC
TCTTCATCTGCGGCGGGTGCTGTTCTGGTGTGTTGGTTCTATGGAGCCTTAGCACGACGACTTCCCGACTGTCTACTACA
ACAACGTTT-GCCCGGCTCCGGTGAGGGAGGGGCGATGACAACGGCGCGCCTTCGACTCGCTTCAGTGCTTGTAGTCGTC
GCTAGGTGGTCTACAGATCTGGATGTAATTTTTTATTATTTTCAGTGTTCGTTGTACTACCATGATTGAAGATGAATAGA
TTGGAAGTTTTTTCCGCAAAAAAAA-------------------------------------------------------
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>chr5A_718
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---GTTTCTTTTCCGATCGTCCCGCCAAAAATTCATTTTCCTTTTCCGGTCCGCGCCCATAAATCCCGCCATGCCCACCG
ATCCGCGCCCCAACGCATCCCGCCCGTCCATCCAAAGCGGCGCGAACCGCCTCACACCGCTCCACGTCACCGATCCGCGG
CACCAGCCCCTCCACCAATCAGCGCGCACCGCCTC-CCAGCTAT-AAAACCACCG-CCCCCTCCCCCG-CTCTCCCCACC
GCAGC--CCAAATTCCCCAATCTCCTCCCGC-ACTCAACCTCAACCCCAATCC-CCACCTACCCC---AAC--------C
CCATGGCGCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCCGCGGCGGAGAAGGCCGAGAAG
GCGCCCGCCGGGAAGAAGCCCAAGGCCGAGAAGCGTCTCCCGTCGGCGGGCAAGACCTCGGCCAAGGA---CGGCG---A
CAAGAAGTCCAAGAAGAAGAGCAAGAAGAGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTGCACC
CCGACATTGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGGGAG
GCCGCCAAGCTCGCGCGCTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCGGTCCGCCTCGTCCTCCC
CGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAA-GGCCGTCACCAAGTTCACCTCCTCCTAGGTTCGCCCGCCC
CCCCTCCTGGTGACCGCTGTTGATCCCCGCCGTGGATCTGCCTGCCTATCTAGATATATATAGTAGTATTAGTAGTAGCG
CTTGATGGAAATCGTTGGACTGTTGATGGTTCGTGTGTAGTCGTGGTTGGTTTGTAAGAGGATGTCCCCGTGGTGCTACT
TTTGCCTGGTCGATCTGAATATTAATGGAACAAT-ATCTGCTACTCCGAATTTGTCTTGAATCATATCAAGAGTAGTTAT
----------------------------ATTTTGACATCCTGTCTGTGCTATGCTTGATGAATTTGAGATGGTTATTTGA
TTTTGATCCGGCCTGTTGTGCACCGTGCGTGCTAGTTTACCTCATTCTGTTGTTCCTGGCCGCTGTTGTCAATGGTATAA
AAGTAGTCACAAT----------------------------TGAATAAATTTAGACCTAATTGGGGTGTTACAATTGGTT
GATCTGAATGTTAATGAAATCATGTCAGCTACTCTGAATTTGCTATGTCAGGTCAAAATCATATAACCATCCCAAATTCA
TCAACCACAGCCACACAGGATGTCAGATATAA------------------------------------------------
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--------------------------------------------------------------------CTACTCTTAATA
TGATACATAGCAAATTCAGAGTTGACAAGCTGCAAGTAATTTTATATAATTGACAAGCTGCATCCAAGAACAATAAAAAT
AGGTAAATTAGCACACACCAGTGCGAAATATGTCAGGTCAAATCATATAACCATCCAATTCATCAAGCACAGCCACACAG
GATCTCAGATATAAATAATCTTAATATGATACATGA--------------------------------------------
--------------------------------------------------------------------------------
---CTTCCGTCCAATGCTCTGGTTGTTTTGTGACGGTTATATGATTTTGTGTGTGCACCTGAGC-TTGCTACTTTCTCTA
ATTCTCTTGTTTCTCC-------GTGTACATTGTTTAAAATTAGTCTACAACTGAATCAATTAGGCCCTTCCTTATAGTA
TATGGAACCAAATAGGTCTTTTAACTGAAGTGTGC---------------------------------------------
--------------------------------------------------------------------------------
---------AACTTACTGATCCAAGTGGCTGTCGAACACTACAAGTAGTATCAATCTTGCATAGACTGTTGCTAAGACTG
TATTTTTAGTTCAAGGAGCAGGCATTTTCACATCGTAGTATATTTATATTTCCAATTCAAGGAACAAGCATTTTTATCAG
ACCACACTTTGCGGGCTTATTCTTGCCATTGGCAGTACCCATATTAATGGGCTAT--TTGCCCCGTGAGCTTACTGTTGC
TTACCTGCAGGAATACTGGTTTACAGTGGAAAGCCTTTCAGCTTTAGTGCCTATCTCTT--GATTTTGAGTGCCTTCTTC
TTTTGCATGCATACAAACAAAGCAGCCTGTGTTT-----------TGTATGCCACATGTTGATTGCTTGTTACAGAAAGT
TCCATTTTCTTGCAGAATTATTAATACCTACTCCTTGCTAGAAATTGGTTGCATGTGGGATGTGTCTAGTGTTGGATCGT
A------AGTATGATGCAGCATCCGTAGCAGGATGTAAC--------TTG------------------------------
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>chr5D_719
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----TTTCTTTTCCGATCGTCCCGCCAACAATTCATTTTCCTTTTCCGATCC-CGCCCAC-AATCCCGCCATCCCCGCCG
ATCCACGCCCCAACGCATCCCGCCCGTCCATCCAAAAA------------------------------------------
------------------------------------CCAGCTAT-AAATCCACCG-CCCCCTCCTC---CTCTCCCCACC
GCAGC--CCAAATTCCCCAATCTCCTCCCGC-ACTCAACCTCAAGCCCAATCC-CCACCCACCTACCCCAC--------C
CCATGGCGCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGTGGAGGAGGAGCCCGCGGCGGAGAAGGCTGAGAAG
GCGCCCGCCGGGAAGAAGCCCATGGCCGAGAAGCGTCTCCCCGCAGCGGGCAAGACCTCGGCCAAGGA---CGGCG---A
CAAGAAGGCCAAGAAGAAGAGCAAGAAAAGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTGCACC
CCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAATGACATCTTCGAGAAGCTCGCCGGCGAG
GCCGCCAAGCTCGCGCGCTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGTCCGCCTCGTCCTCCC
CGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAAGGCCGTCACCAAGTTCACCTCCTCTTAGGTTCGCCCGCCT
CCCCTCCTGGTGACCGCTGTTGATCCCCGCCGTGGATCTGCCTGCCTATCTAGATATATACAGTACTAGTATTAGTAGTG
CTTGATGGAAATCGTTGGACGGATGATGGTTCGTGTGTAGTCGTGGTTGGTT-GTAAGATGATGTTCCCGTGGTGCTACT
TTTG-CTGGTTGATCTGAATATTAATGGAACAAT-ATCTACTACTCTGAATTTGTGATGAATCATATCAACAGTAGTTAT
----------------------------AT-----------------------------GAGTTTGAGACGGTTATATTA
TTTTGATCGGACCTGTTGTGCACCGTGTTTGTTAGTTTACATCGTTCTGTTGTTCTTGGTCACA----------------
----------AAT----------------------------TGAATCAAGTTAGACCCAATTGGGATGT-----------
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>chr1B_802
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--------CCC----------GCCCGTCCACAGAAAACAGCGCCGAACGCATCGCACGGTTCCACGTCACCGATCCGGGG
CACCCACCCTGCCACCAATCAGCGCGCACCC-CCC-CTCTGTATAAACCCAGCAGCACCGCTCCTC---CTTCCAAA---
--------CAAATTCCCCACCTTCTTCCAGT-TCCAGCGCTCACCACCCACCAGCGAATCCCCCC---AACCCGAAGCAT
CGATGGCCCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCGACGACGGAGAAGGCCGAGAAG
GCCCCGGCGGCGAAGAAGCCCAAGGCCGAGAAGCGGCTGCC---GGCGGGCAAGACCGCCTCCAAGGAGGGCGGCG---A
GAAGAGGGGCCGCAAGAAGGGCAAGAAGAGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTCCACC
CCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAG
GCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCC
CGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGAACCAA-GGCCGTCACCAAGTTCACCTCCTCTTAGATTC--------
--------------------------------------------------------------------------------
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>chr4D_802
--------------------------------------------------------------------------------
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--------CCA----------GCCCGTCCATCCCAAAAGCGGCGAACGGCTGGTAT-CGCTTGACATCATCGATCCGCGG
CACCA-CCCCTCCACCAATCAGCTCTCGCCT-CTC-CCATCTATAAAATTCTCCG-CCCCCTCCCC---GTCTTCCCACA
TCTCATCTGCAATTACCCACCATCTCCTCCATATCCTCCGGCGAAACCCAGCC-CCAGTCCACCC---CACCGTCCGCAT
CCATGGCGCCCAAGGCCGAGAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCCGCGGCGGAGAAGGCCGAGAAG
ACTCCCGCCGGGAAGAAGCCCAAGGCCGAGAAGCGGCTGCC---GGCGGGGAAGTCGGCCGCCAAGGAGGGCGGCG---A
CAAGAAGGGCAAGAAGAAGGCCAAGAAGAGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAGGTGCACC
CCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAG
GCCGCCAAGCTGGCGCGGTACAACAAGAAGCCAACCATCACGTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCC
CGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAA-GGCTGTCACCAAGTTCACCTCCTCTTAGG-----------
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>chr4A_805
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---------------------GCCCGTCCATCCCAACAGCGGCGAACGGCTGATAT-CGATTGACGTCATCGATCCGCGG
CACCA-CCCCTCCGCCAATCAGCTCTCGCCT-CTC-CCATCTATAAAATTCCCCGCCCCCCTCCCC---GTCTTCCCACA
TCTCATCTGCAAT-CCCCACAACTCCCACAC-ATCCTCCGGCGAAACCAAACC-CCAGCCCGCCG---CACCGTCAGCAC
CCATGGCGCCCAAGGCCGAGAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCCGCGGCGGAGAAGGCGGAGAAG
ACGCCCGCCGGGAAGAAGCCCAAGGCGGAGAAGCGGCTGCC---GGCGGGGAAGTCCGCCGCCAAGGAGGGCGGCG---A
CAAGAAGGGCAAGAAGAAGGCCAAGAAGAGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAGGTTCACC
CCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAG
GCCGCCAAGCTGGCGCGGTACAACAAGAAGCCCACCATCACGTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCC
CGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAA-GGCCGTCACCAAGTTCACCTCCTCGTAG------------
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>chr1B_845
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-------------------------------------------------------------CCACGTCACGGATCCGAGC
CACCGAACCCTCCACCAATCAGCGCCCACAC-CTCTCCCTGTATAAACCCATCAGCCCCGCTCCTT---CTTCCCGCACA
TCTCGTTCCAAATCTCCCAATCTT-TCCCGC-ACAAACAAGCCTGCACATTCC-CCCCTCCCTCGG---------AGCAG
CGATGGCGCCCAAGGCGGAGAAGAAGCCGGCGGGGAAGAAGCCCGCGGAGGAGGAGCCCGCGACGGAGAAGGCCGAGAAG
GCCCCCGCCGGGAAGAAGCCCAAGGCCGAGAAGCGGCTGCC---GGCGGGCAAGACCGCCTCCAAGGAGGGCGGCGGCGA
GAAGAGGGGCCGGAAGAAGGGCAAGAAGAGCGTGGAGACCTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTGCACC
CCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGGGAG
GCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCC
CGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAA-GGCCGTCACCAAGTTCACCTCCTCTTAGATTC--------
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>chr5D_1929
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-----------TAATAAAATCATATCAGCTACTCGGAATTTGTGATGTACTCCTATCATATTAAGAGTAGTTATGTACTT
ATGTCTGACATCCTCTTTCAAA--ACTAGTCATATCAGCCACTCGGATTTTGTTAATGACATCATATTACAGTAGTTCTG
TTGTTCTGGGATGCTGCTTGTCAACTGATGAAATCGTAGCAAAGTAGTTTTGTTGTTCTGGGATGCCGCTTGTCAATTGT
ATAAACAAACCTAACTGGCGTGTTATAATTGGCCGTCTAATATATAATTGGCTGTCTAATATGGATGAGATTGCCTGCTC
CTCACGCGTGCGCCCATCTGTTCTCCCGCATACGTGGCTTGATTTGATTGAAACAAAATAAGGCCCGGCCCCACCCCCTT
AAAATCAGGGGGGAGATGATTAGATTAGAAAGAAAAAAGAAAAAAAGACAGCCGTAGGATGAGGTGGGAGCATGGATGGG
AGCATGGGGAGGAAGCAGGCAAGCCAGATCCGTCTAATATATGCACCTTGCTAGTTCCGTTCTTGTCATGGGTGGCTCTC
ATATATTAGCTGGCTAATTGCTATGTTGCCCAATGTTAGTATTAGTTATCTGCAAGCGGCAGCAATACACTTTCAGTTTA
TTTCTCTCTTGATTTTGAATGTCACTTTGCATGCATTGGAACAAATCTACCCATCTGTCTGTAGTATGTCACCGCTGATA
CCTACACCACTGATACCTACTGCCTGTTAGAATTTGGTTATTGGTTTTCACTATATGTTAACTGATCTTATTTGGCTATG
GGTTATCCGTTGTAACTTATAGGTCATCCAAATGATGCATTTTCTGCTATGATACATGACTTCTGCCTAATGGTCTGGTT
GTAGGTTATCCATTTTCTGCTTGATGAATTTACGTTGTTGCTTGATTTTTAACCAAGCTGCTATTGTGCACCTGTGTGCT
AGTTTATCTAGTTGTTCTGGTCCACTCCATGTCAATTGTCAAAACTAGTCTGCAACTGAATCAAATATGCATAAGGGTTT
GAACTAACAAGAACGTATGGCAGTTTAGTACTGATCTTTCTAGTTTATACCTGCCCAGGTTCTTTCACGCCATATGCGGC
ACTGATAGTAGTAAGCTAATTGCCATGTTGCTCTGTTGTACAACTTGTAGTTTTACGAAGGCTGTAGCATACACTTGATA
TTTATGTCTTGAATTTGAATGCCCATCTTTTGCATGCATAGAACAGATGAGCCTGCGATGTTGTAGTATGTCACTATGAA
TACCTACTGCTTGTTAGAATTTGGTTTCTATTCAAATGTGTGCAGTACCAGATTAGAAATAATGATGCATTTCTGCCATA
ATACTTGACTCTTGGTTATTGGTTATCCATTGTAACCTAGTTATATAGTATTATTAGTAGTAGAGCTTGATGGAAATCGT
TGGGCGGATGATGATCAGTGTATAGTCGTGGTTGGTTGTAAGAGGATGTTTCTGTGGTGCTACTTCTGGTCGATCTGATT
ATCAATGTCACTATATCTGCTAGTTATATTTGACATCCTGTGTGGTTGTGCTTGATGAATTAGCCATGTTTTATGATTTT
AAACCGACCTGTTCTGTTTTTCTTGGCGGCTGCTTGTCAATGGTATAGAAGTAGTGGCTACTGAATCAAATAGACGTAAC
TGGGGTGTTATAATTGGCTGTTCAACATCCATCTTGCTAGTTTCATGTTTGCCATGGGTGGAACTGATATATTAGCCAAT
TGCCATGTTGCCAAATGTCAGCTTACAAGTATTAGTTGTTTGTAAGCTGCAGCAATACACTTCTAGTTTGATATTTATGC
CTTGATTTTGAATGTCATATTTTGCTTGCGTTGGAACAAAATCAGTCTGTCATGTTGTAGTATGTCACCGTTAATACCTA
CTGCATGTTAGAATTTGGTTGCTTCTCACCATTAATAGCCCTCCACACATTTCTGCTATGATACTTGGTTATTGGTATCC
GTTCTAACATGACTTTTGGTTACTGTTTATTTGTTCTAACTTGATCATAAGTTATCCAATCTTATTTGGCTCTGCGTTAT
CCACTGTAACTTGGCTTATAGGGCAGGCTTGTAGGTCATCCATGTAATGATGCATTTCTGCTATGACACATGACTTCTCC
CTAATGCGTTGGTTATATGTTGCTTGATGAATTTGCGATTGTTATTTGATTTTGAACCAAGCTGCTGGTGTGCACATGTG
TGTGCTAGTTTATCTAGTTCTGTTGTTTTGATCCACTCGATGTCAAATGTATGAAAGTAGGCTGCAACTGAATCAAATAT
GAATACTGCGGGTTTGAACTAACCAGAGCATACGACTTTTTAGTATTGAATCTTCCTAGTTTACTTGCCCTGGTTCGTTC
CTCCCATATGTGGCACTAATATTAGTTGGCTAATTGCCCTATTCTACAACCTGGTAGTTATCTGCAGGCTACTCTTGATA
CTTATGTCTTGATTTTGGATGTCCCATCTTTTCCATGCATGGAACAAATCAGGCCTGCCATGTTGTAGTATGTCACCACT
AATACCCACTGCTTGTTAGAATTTGGTCTGTATTCAAATGCGCGTTGTATCAGATTAGAAATAATGATGCATTTCTGC--
------------------------TATTATACATGACTATTGGTTGTCAGTTACCCATTGTTACCTGCTATAGGTTATCC
AATCTAACTTGGCTATTGGTTACCCATGTAACTTGGCTATAGGTTATCTAATGTAATGATGCATTTCTGCTATGATACTC
TGACTTCCGTCTAATGGTCTGGTTGTTTTGTGACGGTTATATG-TTTTGTGTCTGTACCTGAGCTTTGCCACTTTCTCTA
GTTCTCTTGTTCTGGGTTACTCGGTGTACATTGTTTAAAATTAGTCTACAACTGAATCAAGTAGGCCCTTTTTTATTGTA
CATGGAATCAAATACTTCCTCCGTAAAAAAAAGAGTAAAACACACTGGAGGTCCTAAAAGTATTCCAAGTATATCAAGTA
GGTCATAATAGTCTGAAATCAATCACCATAGGCCTAATTGACACATTTGGAATAATAAAGTAGTGATCTTTACGGAGGGA
GTAGGTCTTAACTTATTGATCCAAGCGGCTGTCGAACACTCCAAGTAGTATCAATCCTGCATAGACTGTTACTAAGA---
-----TTAGTTTAAGGAACACACATTTTCACAGCGCAGTATATTTATATTTCCAGTTTAAGGAACAAAGCATTTTGACCA
CACG-----TGCGGGCTTATTCTTGCCATTGGCAGT----ATATTAATGGGCTATATTTGCCCATTGAGCTTACTGCTGG
TTACCTGCAGGAATACTGCTATACAGTGGAAAGCCTTTCAGCTTAGCGCT---TATCTC--GATTTTGAGTGC---CTTC
TTTTGCATGCATACAAACAAAGCAGCCTGTCTTTTGTATGCCACATGT-----------TGATTGTTTGTTACAGAAAGT
TCCATTTTCTTGCAGAATTA---ATACATACTCCTTGCTAGAAATTGGTGGCATGTGGGATGTGTGTAGCATCAGATTGT
A------AGTATGAAGTAGCATCCGTAGCACGACGTAAC--------TTGACTATACTGCTAGAAGTAATCATCCTACGG
CCTTGTTCGGTTAAACCCCTCCCAAGGGAACTGAA---------------------------------------------
-------
>SNPs
-----------------------------------S--------------S-----------------------------
----------------------S---------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS-----------------------------------------------------------------------------
---------------------------------------------------------------------S----------
---------------------------------------S---------------------------SS-----------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
------S---------------------SS--------------------------------------------------
--------------------------------------------S-S---------------------------------
-----S-S-------------------------SS--------------S---S--------SS-S--------------
SSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------S--------------------
---------------------------S----------------------------------S--S-SSS-SSSSSS--S
-SSS-S-SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------
--------------------------------------------------------------------------------
--S-----------SS-SS---SS--------------------------------------------------------
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-S--------------------------------S-S------S--S------------SS-----S-------------
----------S---------------------------------------------------------------------
-------S------------------------S-----------------------------------------------
-SSSSSS--------------------------------SSSSSSSS---------S----S------------------
-----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS
>forward_710
--------------------------------------------------------------------------------
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--------------------------------------------------AGAACACTTGCCCGTCCATT----------
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>reverse_5735
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------------------------------------------------------TCCCTCTAAACCGAACAAGCC-----
-------
