>input_sequence_79628
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------------------------------------------ATGGAGCACCGGAAGCAGCAGCGGAGCCCCAGTCCCCG
GAGCGGCGGCAGCTCGGGCAAGCACGGCGGCAAGGGGGCCAGCAAGGCGGGCGGCAGCGGGGGCAAGAAGCCGATCAAGG
TGGTGTACATCTCCAACCCCATGAGGGTCAAGACCAGCGAGGCCGGCTTCCGCGCCCTCGTCCAGGAGCTCACGGGCCGC
CATGCCGACCCCTCCAAGTACAATACCGACGACGGCCGCGCGGCGCAGGAGCTGAGCCCGGAGGGGAGCGCGGCTGGGTC
GACGCCTGACGCGGGCGCCCCCGGCTCCGCCGCCGCTGGAGGGCAGCCGGAGCTCGCCGCGGCCGCGTTCGGCGACGGCG
A---------GGAGGAGGACATCTTCGAATCGCAGCTGCTGGACAACGACTACGCCGTCTTCTCGCCGTCGACGTTCCTC
TACGACTACCCGCACAGCAACAAGGTGTAG--------------------------------------------------
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>chr3B_1_TraesCS3B01G365300
GAGAATTAAATAAATTATAAAAAGCAACCACCTTTTCTTGTTCTTTGTAATGATTATAAAAAGCAACTAGCTTTTCTTGT
TCTTTGTAGTTGAAAAAAGGCAACTTGCTGGTATTCCCTACATTGCAAAATGTGACATGGTTTGGCTGTCCAATTTTGTA
CTTTGGCCATGAAATTTGCGCACATTACTTTGTTGCCCAGTTTTAAAAAGCCAGAATCACAAGAAAGTGATTTTGACATA
ATCAAATGATATCAAGTCCATATAATACAAGCCACGGGTCTAGTAGTTTGGTAGCGTGTGCTTGTAAAAAGACCTTGATT
TATTTAAATGATATCAGAGAGGGCAGCCTCTCTTTTGCTCAAAATATATATACTCTCCCTAATATAAGGCACATATCGTT
CAACTAATTGTGGGTTAAACCATGAAATTTGAGAAAACACAATACGGCATACAGATTTAACCGGAAGAAATACAATTCAG
TGTTTCTATGCATAAAAATGGTCCAACAGTGTTCAAACCAAAACACCATACATACACAATATATTGTATATATATATATG
TGTGTGTGTGTGTAAGAAAATTGTATATATGTATTATATAATTGTTGTGGCCGTAGATATCT--CCTTTTTCCTCTAGGT
CACATGCGTAGCCAGCGGCCCGGGCCTCCTGTATAATCCTCCAATGCGAGCGCCCGCCCGGTCTCCGCGTTGTCTCCATC
GTCCCGTCCATCTATCCAAAGCAGGCTAGCGGCTCCTCCCCCGAGTTACTGCTCTACTCCTTCCAGGACGCCTCGCCAGC
TCCCTCCCAACTCCCATCAAGGACCGCGACCACCGCGTGTTGAGCTAAAAATCCCCCACAATGCCAGTAGCCTTTGTTCG
TACATGGCCAGGACCAGCCGCAGCAGAAGCCCTCGCTCTCCTTGCTTCCTGCTGAGACCAACCAGATCGCCTCGCCGCTC
CCCTTCCTGCCCGCCCATCCGCTAGCGAGCTGAGCTGAGCTGATGGAGCACCGGAAGCAGCAGCGGAGCCCCAGTCCCCG
GAGCGGCGGCAGCTCGGGCAAGCACGGCGGCAAGGGGGCCAGCAAGGCGGGCGGCAGCGGGGGCAAGAAGCCGATCAAGG
TGGTGTACATCTCCAACCCCATGAGGGTCAAGACCAGCGAGGCCGGCTTCCGCGCCCTCGTCCAGGAGCTCACGGGCCGC
CATGCCGACCCCTCCAAGTACAATACCGACGACGGCCGCGCGGCGCAGGAGCTGAGCCCGGAGGGGAGCGCGGCTGGGTC
GACGCCTGACGCGGGCGCCCCCGGCTCCGCCGCCGCTGGAGGGCAGCCGGAGCTCGCCGCGGCCGCGTTCGGCGACGGCG
A---------GGAGGAGGACATCTTCGAATCGCAGCTGCTGGACAACGACTACGCCGTCTTCTCGCCGTCGACGTTCCTC
TACGACTACCCGCACAGCAACAAGGTGTAGTGACCAGTCACCCCCGATCCCTCCCGCACGCTAGCTGCATGTTAGCTGAC
GGCCTGACGCGTGTGCCCCCGCTCCTTATTTGCATGTCATTTGAGGATTTCTCTGTATTGCATGTGTGTGCCGCTATGAT
TTGTGC-----TATGATGATCTGCTAGCTCCAATTTAACCCGTCGCATCCCCATGATCGGCCTCATAATTCCCCTATACA
CATATCTATTTGGGGTCTCCGTGTTCTTCTTTCCCCTTCTCTTGTATGGACAAGGCTGTAGTGATGCAATGTGCTACGTA
GTGTACATGTGTACATATGCCTAGATGTTTCGACAATTGACCTTTTTCCCAT-GCCGGGGTTCGATTATTTCATACTGTT
TCTCTGATTTTATGATCACCTAGTCCACCT----AGTGCTTTCTTTGGCATGCTCAGCGGGCAATTTCTGGGTCACCACC
ACTTGTGGGTGTCACTTTCGGTATGGGGAGCTAGCGTGTGCGTGC-AACTGTACTTGATCATGCCTAGGCAATGTGCCAT
GAAGCAGTATGAACATGTTTCTGAAACCCTCGCGAGACCAGACACG------------------------ATCACACGAC
TGAAACAATTATGAAAATATTAGCGTTTCTTAA----------TATAGCACATTCCTTTTAT--TTCCCCTTCATTGCGT
CTTAGGTGATCAAAGATAGGAACCGAGTCCCAAGAAAACACAAAAGTGCTGCATGCCATGCTGCAGTACCACAATTCGCT
GCATGCTGCTTTTTATC---CTTTTTCGCAATTCTTCAGAATCTACTAGATGTTTAGCATCGTTTGACTTGTTTTTAACC
TAGTCCTTTGGTTCTTCTGATCCTATTTGCTTCATTTTATTGATTTTAGTTGCTGCCATGATTCTTCTGCATCAACCGAA
TGGTTGGGCGTTCCATACTTTGCCTTTTGTTCTTTAATTCCTTTCCACTTTGACTTCCTCGACATTGATTG----ATATA
AAGTACTTTTGTTCCTTGAGCTTTTCTGCTCGATCTGTGGATGT
>chr3A_408
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-------TTGTGGGTTGAGGCATGAATTGGACAAACACGATA---GGCATACAAATTTTAGCAGAAGAAATGCAATTCTG
TGTTTCTCTGCATAAAAACGAGCCAACAGTTTCCAAA-CAAAACACCATACGTACATAATAGTATATGTGATTCCCCGCA
AAAGAAAAAAAATAGTACAGTA------------TATGTGATTGTTGTGGCTGTAGCTGATTACCCTTTTTTCTCTAGGT
CACATGCGTAGCCAGCGGCCCC--------GTATAATCCTCCAATGCGAGCGCCCGCCCGGTCTCCGCGTTGTCTCCATC
GTCCCGTCCATCCATCCAAAGCGGGCTCGCGGCTCCTCCCCCGAGTTACTGCTCTACTCCTTCCAGGACGCCTCGCTAGC
TCCCTCCCAACTCCCATCCGCGTGTA-----------TGTTGAGCTAAAAATCCCCCACAATGCCAGTAGCCTTTGTTCG
TACATGGCCAGGACCAGCCGCAGCAGAAGCCCTCACTCCCCTCTCTTCCTTCTGAGACGAACCAGATCGCCTCGCTGCTC
CCCTTCCTGCCGGCCCATCCACTAGCGAGCTC-----AGCTGATGGATCACCGGAAGCAGCAGCGGAGCCCCAGTCCCCG
GAGCGGCGGCAGCTCGGGCAAGGGGGGCAGCAAGGGGGGCAGCAAGGCGGGCGGCAGCGGGGGCAAGAAGCCGATCAAGG
TGGTGTACATCTCCAACCCCATGAGGGTCAAGACCAACGCGGCGGGCTTCCGCGCGCTCGTCCAGGAGCTCACGGGCCGC
CATGCCGACCCCTCCAAGTACAATACCGACGACGGCGGCGCGGCCCAGGAACTCAGCCCGGAGGGGAGCGCGGCTGGGTC
GACGCCTGACGCGGGCGCCCCCGGCCACGCCGCCGCTGGAGGGCAGCCGGAGCTCGCCGCCGCGGCGTTCGGCGACGGCG
ACCGCGACGAGGAGGAGGACATCTTCGAATCGCAGCTGCTGGACAACGACTACTCCGTCTTCTCGCCGCCGACGCTCCTC
TACGACTACCCGCACAGCAACAAGGTGTAGTGACCAGTCACCCCCGATCCCTTCCGCACGCTAGCTGCATGTTAGCTGAC
GGCCTGACGCGTGTGCGCCCGCTCCTTATTTGCATGTCATTTGAGGATTTCGCTGTATTGCATGTGTGTGCCGCTATGAT
TTGTGCGTGCGTATGATGATCTGCTAGCTCCAATTTAACCCGTCGCATCCCCATGATCGGCCTCATAATTCCCCTATACA
CATATCTATTTGGGGTCTCCGTCTTCTTCTTTCCCCTTCTCTTGTGTGGACAAGGCTGTAGTGATGCAATGTGCTACGTA
GTGTACATGTGTACATATGCCTAGATGTTTCGGCAATTGACCTTTTTCCCCAGGCCGGGGTTCGATTATTTCATACTGTT
TCTCTGATTTTATGATCACTTAGTCCACCTAGCTAGTGCTCTCTTTGGCATGCTCAGCTGGCAATTTCTGGAGCACCACC
ACTTGTGGGTGTTACTTTCGGTATGGGGAGCTAGCGTGGGCGTCCAAACTGTACTTGATCATGCCTAGGCAATGTGCCAT
TAAGCAGTATGAACGTGTCTCTGAAATCCCCGCGAGACACGATCAAAGCCGAGCCTTATACACGAGAGCAATCACACGAC
TGAAACAACTCTGAAAA-ATTAGCGTTTCATTAATTATAGGCTTATAACACATTCCTTAATTTCTTTCCCTTCATTACGT
CTTGGGTGATCAAAGATAGGAGCCGAGTCTCAAGAAAGCACACAAGTGCTGCATGCCATGCTGCAGTACCACAATTCGCT
GCATGCTGCTTTTTACTATTCTTTTTCACAATTCTTCCGAAT---CTAGATGTTTAGCATCGTTTGACTAGTTTTTACCC
TAGTCCTTTGGTTCTTCTGATCCTATTTGCTTCATTTTATTGATTTTAGTTGCTACCATGATTCTTCTAGATCAACCGAA
TGGTTTGGCGCTCCATAGTTTGCCTTTT---CTTTAATTCCTTTCCACTTTGACTTCCTCGACATTGATTGATTGATATA
AAGTACTTTTGTTACTTCAACTTT--------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS---------S-SS------S-SSSSS--S--SSS-SSS--------S----S-S-S--------S------S-
-------S----------S-SS--------S-S----S-------------S----S----SSS-S-S-SSS-SSSSSSS
SSS-SSSSSSSS--SS-S-S-SSSSSSSSSSSSS---S-S-----------S----S-SSS----------S--------
---------------------SSSSSSSSS--------------------------------------------------
------------S---------S----S------------------------------------------------S---
------------------SSS-SSSSSSSSSSSSSSS-------------------------------------------
----------------------------------S---S---SS------S-------S----------------S----
-----------S--------S----------SSSSSS----------S--------------------------------
----------------------SSS---S---------S-----------------------------------------
------------------------------------S--S---S-----------S------------------------
------------------------------------S-------S-----S--S--------------------------
-------------------------SS---------------------------------S--S----------------
-----------------------------------------------------S--------------S-----S-----
----------------------------------------------------S---------------------------
----------------S----------------------------------S----------------------------
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----------------------S----------------------S----------------------------------
--------------------------------S-----------------SS----------------------------
-------------------S--------------------S-----------------S------------SS-------
------------S-------------------------S----S------------------------------------
S-------------S---S-------S--S--------SS--SSSS----------------------------------
--------S-S------S-----------S-S---------------S----------SSS-----S---------S---
---S-----------------S-------S-------S----S-------------------------------------
---------------SS----------S---------S----SSS------------------------S-------S--
------------------------------------------------------S-------------SS----------
-----S----S------S----------SSS-------------------------------------------------
-------------S---S-S----SSSSSSSSSSSSSSSSSSSS
>forward_825
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-----CCCAACTCCCATCAAGGACC-------------------------------------------------------
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>reverse_2019
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------------------TTCTGAAACCCTCGCGAGAC------------------------------------------
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