>input_sequence_79598
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------ATGGCCCC
CAAGGCGGATAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCGACGACGGAGAAGGCCGAGAAGGCCCCGGCGG
CGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACCGCCTCCAAGGAGGGCGGCG---AGAAGAGGGGCCGG
AAGAAGGGCAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTGCACCCCGACATCGGCAT
CTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAGGCTGCCAAGCTCG
CCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCC
AAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------
>chr1A_1_TraesCS1A01G228700
ACATTTTTCAAATATACAAACATTTTTAGATTTGCGAACATTTTGTCAATCCGCGAACATCTTTTCTATTTTGCGTGAAC
-TTTTCAATTCATGAATATTTTTAAGTTCACAGACATTTATTTTTTAGTTTGTCTTTTCTTGAATCCGTGAATATTTTTG
AATTCACGAACATTTTTTATGATTTTTAATGAAACCGGTAAAACCATGAGAGAGGGCCAGGAAAAAAAAAAGATAGACAG
GTGAAAGAAGGTTAAAAAACAAGAATGTTCCCAAAATTAGAAAGGACCAAAAGAGTAAAAACCGAAGTAAAAAAACCAGA
TAATTTTGTTTTAGCGAGCAGTGCAAGGCTTGTGTGCGAGCCGTGGCTGCCTTTTTTTTAGCATCAGTATAAACACAAGC
GCTCATATATACGCGCATACACTTATCCCTATGAACGCACACACGCATACCCTACGTGGCTGCCTTTTTTTTGAGCATCA
GTATAAACACAAGCGCTCATATAGACGCGCATAGACTTATCCCTATGAACACACACACACCCTACGTCTCCTCTCACTGA
AAGCGCATCGCCGAAAATCATGAAATAAATCCAGAAATAATGTAAGCACCAAGATTTAAATCCTAATGAGTTGGGAATAC
CATCGTCCACTTAACCAACTCTACCGCGAGAAATCCAAAACCATTCTAGCGGTCGCGCGCGGTTCCGGCCTTTCCGTTCC
CGCCCCGTATCTTTTCGACAGGAACAGCGATCCGCGCCGAAACGCATCCCGCCCGTCCACAGAAAACAGCGCCGAACGCA
TCGCACGGTTCCACGTCAGAGCGATCCGGGGCACCCACCCTTCCACCAATCAGCGCCCACCTCCCCCTCTGTATAAACCC
AGCAGCCCCGCCCCACCTTTCGTCT-CATCTCCTTCCAAACAAATTCCCCACCTTCTTCCAG-------------TTCCA
GCACTCACAACCCACCAAGGAGGAGAAT----------------CCCCAATCCCG-ATCAGCCTCAGCAGCGATGGCCCC
CAAGGCGGATAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCGACGACGGAGAAGGCCGAGAAGGCCCCGGCGG
CGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACCGCCTCCAAGGAGGGCGGCG---AGAAGAGGGGCCGG
AAGAAGGGCAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTGCACCCCGACATCGGCAT
CTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAGGCTGCCAAGCTCG
CCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCC
AAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGATTGCCATGTTTACATCTCAGAAACT
GTAGTTGGCTGCCGTGTATCTAAAACTAGTGTTTATTGCTCAATGGAAATTGGTGGA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATGCTG-TTAGTTTTTCGTTCGA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TTGCTGATGTTGCCGTGCCATGT--------ACTGATC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGAAATA---GTAAACGATGTGG
TGCGCATATTTTGGGAGGAACCCTCGGTTCTGATTTCTGAATTTGT------------TGCTCGTTTGATGCATGGCCTA
GCTTTCTGACCGAACTGTGTTATGTGACTGTAAGTGATGTATGTTTTCTTTTGGAGACTTGGAGAAATGTCATGTGGTAA
TTTGGCTGAAGAAACCAGGTCGGCTATCCCATTTGTTCGACATTTCTCAGAATCAGCTCCATTGCGTGGAGCT-------
---CAATTGAGGATCTGTACACTGTAGCTCTTGGTGGTTGGGACACGCTTCTCTTGCAGGTTGTTCCCAAAGACAAGTAC
CTGATGAATTTGTACCAAGATCGGACTGAGATCCGGTGCCTTGGCACACACAAGGCACGGATAAACAGTATCGTGCCTTG
AGGGCATCTCCTGGCTGTTGGATCTACAAGCGACGGTCCGATGAACATCAAGAGTCACCGCTACAGGATAATCGCTACAG
GACCAACACACTGTAGCGCGGGGTACTGTTCACTGAAATCTGGAACCTTGATTTCCGATCTAACGGCTGAAAGCTCAAGG
CACGATACTGTTCATCCGTGCCCTGTGTGTGCCAAGGCACTGGATCTCAGTCGACCAAGATCTTTGGAGATAAACCAGCT
ACCAGATATTGTGAAAAAATAACAACGAAGGAGACATATTGGTAATCTTTATGACATCAAGATGCCAAATCTCTTTAAGA
AAATACTATCATTGCAAG-TACATACAAGGGCAACAACTGTGTGAACATCTACAACTTCTTGAATCATGAAGGAGACGTA
TTGGT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------AATACTGCAGCAATTCAGAGATCGTTTGACTTCGTGACTGGCTGGTTAGTTCTTCATTTTCCC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr1D_2
-CATTTTTCAAATGTACAGACATTTTAGAATTTGTGAACATTTTTTCAATCCGCGAACATCTTTTCTATTTTGCATGAAC
TTTTTCAATTCATGAATATTTTTAAGTTCACAGACATTTTGTTTCGAGTTTGCATTTTCTCGAATCCACGAATATTTTTG
AATTCGCGAACATTC-TTACGCTTTTTAATTCAACCGGTAAAACCATGAGAGGAAACCAGGAAAAAGAAAAGATAGAGTG
GTGAAAGAAATCC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------AAACCATTCTCGCGGTCGCGCGCTCTGGCCTTTCCGTTCCC--
-G-CCCGTGTCTTTTCGCCAGGAACAGCGATCCGCGCCGAAACGCATCCCGCCCGTCCACAGAAAACAGCGCCGAACGCA
TCGCACGGTTCCACGTCAC--CGATCCGGGGCACCCACCTATCCACCAATCAGCGCCCACCTCCCCCTCTGTATAAACCT
AGCCCTCCCGCAGCTTGT-TCCGCAACATCTCCTTCCAAACAAATTCCCCATCTTCTTCCAG-------------TTCCA
GCACGCACAACCCACCCAGGCGGAGAAT----------------CCCCCACACCAAATCAACCTCAGCAGCGATGGCCCC
CAAGGCGGAGAAGAAGCTGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCGACGACGGAGAAGGCCGAGAAGGCCCCGGCGG
CCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACCGCCTCCAAGGAGGGCGGCG---AGAAGAGGGGCCGG
AAGAAGGGCAAGAAGAGCGTCGAGACGTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTGCACCCCGACATCGGCAT
CTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAGGCCGCCAAGCTCG
CCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCC
AAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGATTGCCATGTTTGCGTCTCAGGAACT
GTAGTTGGCTGCCGTGTATCTAAAACTGGTG------------------------GA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATGCTGA----TTTTTGGTTTGA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TTGCTGATGTTGCCGTGTCATGT--------ACCGATC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGAAATA---GTAAACGATGTGA
TATGCATCTCTTGGGAACCCTCGT----------TTCTGATTTCTTAACT------AGTACTCGTTTGATGCATGGCCTA
GCTTTCTGACCGAACTGTGCTATGCGATGGTAAGTGATGTATGTTTTCTTTTGGAGACTTGGAGAAATGTCA--TGGCAA
TTTGGCTGAAGAAACCAGATCGGCTGTCCCATTTGTTTGACATTTCTTAGAATCAGCTGCATTGTGGGGAGCT-------
---CAATTGAGGTTCTGTACACTGTTGCTCTTGGTGGTTGGCACACGCTTCTCTTGCAGGTTGCT-CCAAAGACAAGTAC
CTGATGAATTTGTACCAT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GATCTTTGGAGATAAACCAGCG
ACCAGATATTCTGAAAA-ATAACAATGAAGGAGAC--ATTGGTAATCTTTATGACATAAAGATGCCAAATCTCTT-AAGA
AAATACTGGCATTGCAAGCTACATACAAGGGCAACAACTGCGTGAACATCTACAACTTCTTGAACCATCTTTTATCATCC
TGCTCTGC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------AAATACTGCAGCAATTCAGAGATCGTTTGACTTCACGACTGGCTGGTTAGTTCTTTGTTTCCCC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr1A_694
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------GCGCGCGGTTCCGGCTTTTCCGTTCC
CG-CCCGTATCTTTTCGCCAGGAACGGCGATCCGCGCCGAAACGCATCCCGCCCGTCCACAAAAAACAGCGCCGAACGCA
TCGCACGGTTCCACGTCAC--CGATCCGGGGCACCCACCCTTCCACCAATCAGCGCGCACCTCCCC-TCTGTATAAACCC
AGCAGCACCGCCCCTCACTACCTCT-CATCTCGCTCT----AAATTCCCCACCTTCTTCCAGCACTCACGAG--------
----TCACAGCCCACCAGCGAAG--------------------CCCCCAACCCCG-ATCAGCCTCAGCAGCGATGGCCCC
CAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCGACGACGGAGAAGGCCGAGAAGGCCCCGGCGG
CGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACCGCCTCCAAGGAGGGCGGCG---AGAAGAGGGGCCGC
AAGAAGGGCAAGAAGAGCGTCGAGACCTACAAGATATACATCTTCAAGGTTCTCAAGCAGGTCCACCCCGACATCGGCAT
CTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAGGCCGCCAAGCTCG
CCCGCTACAACAAGAAGCCCACCATCGCCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCC
AAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGATCGCTAGTTT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr1D_694
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TTCCC--
-G-CCCGTGTCTTTTCGCCAGGAACAGCGATCCGCGCCGAAACTCATTCTGCCCGTCT--AGGAAACAGCGCCGAACACA
TCACACGGTTCCACGTCAC--CGACCCAGGGCACCCACCCTTCCACCAATCAGCGCCCACCTCCCCCTCTGTATAAACCG
AACAGCACCGCTCCTCCTTTCCTCT-CATCTCCTTCCAAACAAATTCCCCACATTCTTCCAGCAAA--------------
-----CACAACCCACCAGCAAA-------------------TCCACT-AACCCCG-ATC-ACCAAAGTAGCGATGGCCCC
CCAAGCGGAGAAGAAGCTAGTGGCGAAGAAGCCCGCGGAGGAGGAGCCCACGACGGAGAAGGCCGAGAAGGCCCCAACGG
CGAAGAAGCCCAAGGCCGAGAAGCGTCTGCCGGCGGGCAAGA------------------------------AGGGCCGC
AAGAAGGGCAAGAAGAGCGTGGAGACATACAAGATCTACATCTTTAAGGTGCTCAAGCAGGCCCACCCCGACATCGACAT
CTCCTCCAAGGTCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAGGCCG--AAGCTCG
CCCGCTACAACAAGAAGCCCACCATCACCTCCTGGGAGATCCAGACCCCCGCCCGCCTCGTCCTCCCCAACGAGCTCGCC
AAGCATGCCGTCTTCGAGGGCACCAAGGCCGTCACCACGTTCACCTCCTCGTAGATTGCCATGTTTGCATTGCA-GAACT
GTAGCTGGCTGCTGTGTATCTAAAACTAGTGTGCTCATACCCAAGTACTCAATTTTTCCTTCTTTGGCGATGCAGGTGGT
GAAGGGGCACACTTGCTCTCCTTGATGAAATCCAAAAGGATCTCCTTCAGGTCTTTGAATCTTGTGAAGCAAGCATTGTA
TCATGATAGCATTAATTTAACTTCACGCATAATATCCTTGTTTTCTAGTCCCCATGGATTTTTCTTTCCTGCATCACTTT
CACTTGGATTGGAGATGTACAATTGGAGGGTATGTGCAAGCCAGACGTATTCTTAACTCCATAATTGTGAACCAAATTAT
GAAAAGGGTTCCTTTGTAACCAAGGCGAGGGCTTCTTTGGGATAGAGTCCTCTAATGCCTTGAAACCTGAGTGAATTATC
GCCATCTTCAAGGTCCTGGATGAGATGGGGGCAATGGAGATGCTGGCCAGAGTCTCTCGGTCAAACTCCGGTGCTTGAGC
TTTTACGGGGTTCCCCGATTCTTCCTCCAAGGTAACATCCTCCATCAACTCCCTCTCAATATCCTCCTTCAACTTTTGAG
CATCATCTTCAACTTCGTTGGAGGAGGAAGAAGACATGATGAACTTGACCTCGTTACCCTTGCAGAAAATAGCTCAAAAC
GAAAAACAAGAGGAAAACTTGCGATACAAAGGTCAGATCGTCCTCAGGATTTTATAGGATTTTTTTACTTTGCAGGGCAA
GCATACAAGAAGAAAACGGAGAGTCGAGAGGGTGGGGGGGATAGCCCCCACATGGACAGGCGACACGGCGGCGGGGGGGG
GGGGGCAGGGTTCCATGCTGGCCTCTCGGGCACCGCCTCGTCTGTTTATTTTTCCCCAAAATCATTAAATATTCCAAAAC
TAACAAAAACATTTTATGGAATTTTTGGAGTCGCTTTACTTACCGTATCATAT--------ACCTATTCCTTTTGGAGTC
TTCCGAAAGGTTTCTTCTATGTATTCTTCCGGTGTAATTACTTGAATAACATCGGAATCAATGTTAATGGGATTACCTGC
AATATAATGTTTAAGTCTTTGCCCATTAACTATCTTGGATTTATTTCCTTCAACATTATTTATCATTTTTTAGCCATCAA
CGTTATTTAACTTGATAGCTCCAGAATGGAAAACTTTTTCAATGCCATATGGGCCTTCCCATTTAGAAATTGCGAGAAAT
TTGAAAATTAGTGAACCATTTCAATTTTGTGAACATTATTCAAATATGTGATTTTTTTGAATTA---GTGAACATTTCAT
TTTT-------------------T----------TTCTGCTTTTTTAACCTGTGAA------CATTTTTTCTATCTGCGA
ACTATTTTTTTGAATTATTGAACCTTTTCCAAATATGCCAACATTTT---------------------------------
--------------------------------------------------------------------------------
----------------------TAAATC-------------CACAAACATTTTTTGAAATGGCAATCAGTTTT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CATATTCGTGATTTTTTTGAATTAACAATTTTTTAATACATG----
-----------------------------------------------------AACTTTTTGAATCCACGAACAATTTTC
AAATATACAGAAATTTTTGAATTTGTGAACATATTTTCAATCTACAATCTTTTCTATTTTGCGTGAATTGTTAAATTTAT
GAATGTTTTTATGTTCACAAACATTTTTTGAATTCATGATTTTTTTTAGTTTGCCTTTTCCCGAATCCACCAATATGTTT
TGAATTCGCGAACATTTTTATGATTTTTTTTCATTTTTAATAAAACCGGTAAATCCATGAGAGAAAACCAGGGAAAAGAA
AAGATAAACCGGTGAAAGAAGGTTAAAAAGGAAGAATGATCCCAAATTACGAAAGGACCAAAAGAGTAAAAACCAAAGTG
AAAAAACCAGAGATTTTTTTTTTAGCGAGCGGTGCGAGGCTTGTGTGCTCGCTCGTGTGCGAGCGGCGCTCTACCTCGTG
GCTGCCTGTAGCGATACATAGCGCTGCCCGTCAGAAATCCAAAACGATTCTCGCGGTCGCGCGCTCCGTAATCAGCGCGC
GGTTCCGGCCTTTCCGTTCCCGCCCGTGTCTTTTCGCCAGGAACAGCGATCCGCGCCGAAACGCATCCCGCCCGTCCACA
GAAAACAGCGCCGAACGCATCGCAAGGTTCCACGTCACCGATCCGGGGCACCCACCCTTCCACCAATCAGCGCGCACCTC
CCCCTCTGTATAAACCCAGCAGCACCGCTCCTCCTTTC
>chr1B_694
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------GCGCGCGGTTCCGGCCTTTCCGTTCC
CG-CCCGTATCTTTTCGCCAGGAACAGCGATCCGCGCCGAAGCGCATCCCGCCCGTCCACAGAAAACAGCGACGAACGCA
TCGCACGGTCCCACGTCAC--CGATCCGGGGCACCCACCCTGCCACCAATCAGCGCGCACCTCCCCCTCTGTATAAACCC
AGCAGCACCGCTCCTCGTCTCCCCAACATCTCCTTCCAAACAAATTCCCCACCTTCTTCCAG-------------TTCCA
GCGCTCACCACCCACCAGCGAA-------------------TCCCCCCAACCCCG-ATCAGCCGAAGCATCGATGGCCCC
CAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCGACGACGGAGAAGGCCGAGAAGGCCCCGGCGG
CGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACCGCCTCCAAGGAGGGCGGCG---AGAAGAGGGGCCGC
AAGAAGGGCAAGAAGAGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTCCACCCCGACATCGGCAT
CTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAGGCCGCCAAGCTCG
CCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCC
AAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCGTAGATTGCCATGTTCGCATCTCAGAAACT
GTAGTTTGCTGCCGTGTATCTAAAACTAGTGTTTATTGCTGAATGGAAATTCGTGGA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATGCTG-TTAGTTTTTGGTTCGA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TTGCTGGTGTTGCCGTGTCATGT--------ACTGATC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGAAATG---GTAAACGATGTGG
TGCGCATCTCTTGGGAACCTTCGG----------TTCTGATTTCTTAACCAGTTACAGTACTCGTTTGATGCATGGCTTA
GCTTTCTGACCGAGTTGTGTTATACGACGG-AAGTGATGTATGTTTTCTTTTGGAGACTTGGAGAAATGTCATGTGGCAA
TTTGGCTGAAGAAACCAGATCGGCTGTCCCAGTTGTTCGACTTTTCTTCTTAAACTGGCTCAATTGGGACAGCCGATTGT
TTCCAATTGAGGTTCTGCACACTGAAAC-------------CACACGCTTCTTTTGCAGGTTGTT-CCAAAGACAAGTAC
CTGATGAATTTGTACCAC--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GATCTTTGGAGATAAACCAGCG
ACCAGATG------------------------------TTGGTAATCTTTATGACACCAGGATGTCAAATCTCTTG-AGA
AAATACTGTCATTGCAAGCTACATACAAGGGCAACAACTGCATGAACATCTACAACTTCTTGAACCATCTTTTATCATCC
TGCTCTGC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------AAATAGTGCAGCAATTCAGAGATCGTTTGACTTCACGACTGGCTGGTGAGTTCTTTGTTTTTCCC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr1B_712
TCCT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GTTCC
CG-CCCGTATCTTTTCGCCAGGAACGGCGATCCGCGCCGAAACGCATCCCGCCCGTCCACAGAAAACAGCGCCGAACGCA
TCGCACGGTTCCACGTCAC--CGATCCGGGGCACCCACCCTGCCACCAATCAGCGCGCACC-CCCCCTCTGTATAAACCC
AGCAGCACCGCTCCTC----------------CTTCCAAACAAATTCCCCACCTTCTTCCAG-------------TTCCA
GCGCTCACCACCCACCAGCGAA-------------------TCCCCCCAAC----------CCGAAGCATCGATGGCCCC
CAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCGACGACGGAGAAGGCCGAGAAGGCCCCGGCGG
CGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACCGCCTCCAAGGAGGGCGGCG---AGAAGAGGGGCCGC
AAGAAGGGCAAGAAGAGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTCCACCCCGACATCGGCAT
CTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAGGCCGCCAAGCTCG
CCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCC
AAGCACGCCGTCTCCGAGGGAACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGATT-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr2D_746
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GCGATCCGCGCCGAAACGCATCCCGGACGTCCACGTCCAATAGCGCCGAACGCA
TCTGACCGTTCAACATCAC--CGATCCGGGACACGCACCCCTCCACCAATCAGCGCTCGCCTCTCCACCTCTATAAGCCC
ATCACCCCCGTTCTGC----------------TTTCCCCCACATC---------TCCTCCAT-------------CTCCA
AGTCCCAACACCTTCCGGCGGCGAAGCAACCCACCCACTTTTCTCCCCCTC----------CCGAAGCAGCGATGGCCCC
CAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGCAGAGGAGGAGCCCGCGGCGGAGAAGGCCGAGAAGGCCCCGGCGG
CGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACCGCCTCCAAGGAA---GGCGGCGAGAAGAAGGGCAAG
AAGAAGAGCAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTGCACCCCGACATCGGCAT
CTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGGGAGGCCGCCAAGCTCG
CCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGGGAACTCGCC
AAGCACGCCGTCTCTGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGACTGC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr1A_783
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------AAACAGCATCGAACGCT
TCATACCGTTCCACGTCAC--GGATCCGAGCCACCAACCCCTCCACCAATCAGCGCCCACACCTCTCCCTGTATAAACCC
ATCAGCCCCGCTCCTT----------------CTTCCCGCACATC---------TCGTTCCAAATCTCCCAATCTTTCCC
GCACAAACAGACCAGCGCCCCTTCCCTC--------------CCCCCTCCC----------TCGAAGCAGCGATGGCGCC
CAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCCGCGACGGAGAAGGCCGAGAAGCCCCCCGCCG
CGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCCGCGGGCAAGACCGCCTCCAAGGAGGGCGGCGGCGAGAAGAGGGGCCGG
AAGAAGGGCAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTGCACCCCGACATCGGCAT
CTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGGGAGGCCGCCAAGCTCG
CCCGCTACAACAAGAAGCCCACGATCACCTCCCGCGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGAGAGCTCGCC
AAGCACGCCGTCTCTGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGATTCAGTCTCTG--------GCAGCT
GTAGTTGGGTGCTGTTTGCCCAGAATTAGT----GTTGCTCAATGGAAATCGGTGGA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATATCGTTTAGTTTGTAGTTGGG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TTGGTGATGTTACCGTGTCATGT---GACTGATCGATC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGAAATA---GCAATGGTCTGG-
--TGCATCTTTTGGGAAGCCTCTG----------TTCTGAACTAGT------------TACTCGTTTGATGCATGTCCCA
ACTATCTGTCTGATCTCTGTTATGTAATGGTAGTTGATGTTGTGTTTT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>chr1B_994
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------AGCAGCGATGGCGCC
CAAGGCGGAGAAGAAGCCGGCGGGGAAGAAGCCCGCGGAGGAGGAGCCCGCGACGGAGAAGGCCGAGAAGGCCCCCGCCG
GGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACCGCCTCCAAGGAGGGCGGCGGCGAGAAGAGGGGCCGG
AAGAAGGGCAAGAAGAGCGTGGAGACCTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTGCACCCCGACATCGGCAT
CTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGGGAGGCCGCCAAGCTCG
CCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGGGAGCTCGCC
AAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGATTCAGTCTCTG--------GCAGCT
GTAGTTGGGTGCTGTTTACCTAGAATTAGC----ATTGCTCAATGGAAATTGGTGGA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GTATTGTTTAGTTCGTAGTTGGT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TTGGTGATGTTACCGTGTCATCATGGGACTGATCGATC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGAAATACTAGCAATGATCTGG-
--TGCATCTTTTGGGAAGCCTCTG----------TTCTGAACTAGT------------TACTCGTTTGATGCATGTCCCA
ACTATCTGACTGTTCTCTGTCATGTGATCGTAGTTGATGTTATGTTTT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>SNPs
S------------S----S-------SSS-----S---------S-----------------------------S-----
---------------------------------------SS---SS------SS------S------SS-----------
-----S--------SS---S-S--------SS--------------------SSSS----------S----------SS-
---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S--------------------------------
--S--------------S--------------------------------------------------------------
------------------SSS-----------------------------------------------------------
--------------S------S----------------------------------------------------------
--------------------------------------------------S-----------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S--------S-SSS-S-SSSSSSSSSS-------------------------S--------------------
----------------------------S------------------------------------------------S--
------------------S------S---------------------S----------------S-S-------------
------------S----------------------------S-----------------------S--------------
-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S
----------S------S-------S-------------------------------------------------S----
-------S--------------------------------S---------------------------SS-SS-SSSS-S
-SSSS---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S--------------------SS--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>forward_567
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CTCCTCTCACTGA
AAGCGCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
>reverse_3272
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TCGCTACAG
GACCAACACAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------
