>input_sequence_79514
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--------------------------------------------------ATGATACCATGCCTTGGCCCAAGTAGTACT
CCCTCACTCCCAGTCTCACTTGTAGAGAAAAAAACTTGTAGAGAAATCCCCTTTCCTCTGACTCTGAGAAATCCCCCAGA
TCCAAAAATCATGGACGGCGACAGGCCGACTACGGCGGCCGC---GGCCGCGTCGGTGAGGTCGGTGCTCGGCGACGACG
ACCTCTTCCGCGAGATCCTCCTCCGCCTCGGCTTCCCCAACTCCCTCGTCCGCGCCGCCCTCGTCTCCAAGCGGTGGCTC
TTCCACGCGTCCGATCCGGCCTTCCTCCGCCTCTTCCGCGAGCGCCACCCACCCCGCCTCCTCGGCTTCTGCGTCAGCAA
CGACGCCC------------GGTATCAGTTCGTGCAGCTCGAGCAGTCCCCGGAGCTCGCCGCTCTCTCACGCCGTGTGG
CCTCCTCCTGCAACGACGCCTTCCGCTGCCGTGGGTC------GGGTATCTGA---------------------------
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-------------------------------------------------------------------------------
>chr3D_1_TraesCS3D01G456400
GGCCATTCTTGTCTCCCCACTAGAAATCTCTAATTAATTTCTTTTATTTCTCACAAAATCCCATTGACAACAATTTGGCT
CCCGGGCTCAGATGAGCCCAAACATGAATAGTAAAATTGCTAAAAATAGTTTAAAAAAGATGTAC-TTTTTTGCAAGCAA
GATGCTCAAATACGTGATGTCCATGCAAATTTGATGAAGTTTGGACATCCGAGGAGCTCGTGCCCAAAAAGACAAATTCA
GGGTGTTTTGGAAACATTTGAAAAAACACTATTCGGAGCCGGTTGTGCCTTTTTTTGCCATGAGCTCCTCGAATGTCCAA
ACACCCTAAAATTTAGACAGATATCACGCATTTCAGCATCTTGCTTGGAGAAAAGATTTAGATTCTTTTAAAAAAAATAC
TGTTCACCAGGAGCAGATGAGCTCAAACTTAGAATTCAATATTCGAACTGTTAAGACATTCTTTCAAATATAGTCTATAG
GGTGGGAGTGCATATAAGAAATCATTGAAGAGGTCATGCCATAGAAAGAAAGAAAGAAAGAAAAAC---------AGTCC
AAGAGAATGTACGTGTACATATGGATCATGTAAATGATGAGTAATATGTAGGACAATTACAACCATCGATAACACGAACC
AAACCGTATATGAATGTATTACATTGGACCCCGGGAGCATCTAATAAGGTGCTCGAAGTATTTGAGAAGGGCATTAGAGC
CCTGAAACATGGGTGTGGTAACCAAATAGACGTGAATATCTTTGCAAGATGTCCGAAGAAATGTAACCAAATGGTTCGCG
GAAAATGGATGTCCAACGCGGAAAATGGTCGGGATGCCCTGCACCAAGGTGAGCACACTTAAACGTGCAAAATTATTATT
ACCGTCTTTTTTGAACTTCTCTTTTGCAAAGTTTAACCTCTTTCTAGATTTTAGAACAAAGTTGAACTATTCTCGTGCAA
AGTTTAACTACTAGTTTCAACGATACACCATTTGGCGAGCTAATAAAAACATGATACCATGCCTTGGCCCAAGTAGTACT
CCCTCACTCCCAGTCTCACTTGTAGAGAAAAAAACTTGTAGAGAAATCCCCTTTCCTCTGACTCTGAGAAATCCCCCAGA
TCCAAAAATCATGGACGGCGACAGGCCGACTACGGCGGCCGC---GGCCGCGTCGGTGAGGTCGGTGCTCGGCGACGACG
ACCTCTTCCGCGAGATCCTCCTCCGCCTCGGCTTCCCCAACTCCCTCGTCCGCGCCGCCCTCGTCTCCAAGCGGTGGCTC
TTCCACGCGTCCGATCCGGCCTTCCTCCGCCTCTTCCGCGAGCGCCACCCACCCCGCCTCCTCGGCTTCTGCGTCAGCAA
CGACGCCC------------GGTATCAGTTCGTGCAGCTCGAGCAGTCCCCGGAGCTCGCCGCTCTCTCACGCCGTGTGG
CCTCCTCCTGCAACGACGCCTTCCGCTGCCGTGGGTC------GGGTATCTGACACAGCCGGAACGGCCGCCTCATCACC
ACACTCTTCCAC------------------GGCGGAAGGGTCAA------GCGCTCCCTCCTCTCGCCGTTGCTCTCCGG
GGAGTCCGAGGTGGT-----CCT----CCCACCGATCCCGCCGCCCCACATT---GA---------GTCCGCTGGACGGG
TGTCCACTACGATTTTCCTAACCGAGGATGGGAGCCGCGGCGGCATCACCTTGATACATCTGTGGAAGGCCGG-------
------GCGGAAAGTCCGTGCGGAAGTGTACTTGCTGGGATCCGGCTGTTGGGGCGCTCCTACCACCGCCGTGACAG-AG
GTCCCGAATGCTGCAGCCTTCCTTACAAAAACTAGATGACTCGTTGCGCCAATGGCACAAAGGGCGAGAG--AGACAACT
ATTATAAGAATATTCAGACACCCAAGTCTTTACTATTGGTACATAGATGATTAGTTACAATGTGGTACACAAAGGAAGTA
GGTAGGAAGGGATAGATTATTAGCTTACGAAAACCAAACGTGGCCAACACTGCCGCATCCTCTGCTTGGAAGCCGCCTTT
TCTCACCGGATTTAACATAGGTACATGATCACAAAAGGAAGCAAGACCATCATATATAATGGTCTACTTACTTATTCAAG
TTAGTGATCAGGTGGCTGGAACCGCAAAGTATAATGGGGCTTGACGGACAATAAAAATAGGTGTTGCTCCTCGTCTCC--
-TCCTCCTCCTGAGTCTGGATCGAGGCCTCGCTCCTCTCTTCTCCTGAATGACAGCTTGAAGGAAAGGACACACAAAAGC
GCAGTCCTATACATTGACTAATCTGACAGAAAA-TAGAGACAAATGTAGATATGGTTATCTATTATGACGCTAATAAAAA
AGTAAAACACTAAACAG-AGACAAATAGAAGAATAGTGAGGATTGGAGTAACCTCTACATAATAATTCAGATTGCATCAC
TAAACATATGAATGACAGAGAGCCCCAAATAAATTGGCTTTATCAGGTATATGAATGACATTACAGAGAGAATTACCAA
>chr3B_1
GGCCATTCTTGTCTCCCCACCAGAAATCTCTAATTAATTTCTTTTATTTCTCACAAAATCCCATTGACAACAATTTGGCT
CCCGGGCTCAGATGAGCCCAAACATGAATAGTAAAATTGCTAAAAATAGTTTTTAAAATATGTACTTTTTTTGCAAGCAA
GATGCTCAAATGCGTGATGTCCACGCAAATTTGATGAAGTTTGGACATTCGAGGAGCTCGTGCCCAAAAAGACAAATTCA
GGGTGTTTTGGAAACATTTGAAAAAACACTATTCGGAGCCGGTTGTGCCTTTTTTTGCCATGAGCTCCTCGAATGTCCAA
ACACCCTAAAATTTAGACAGACATCACGCATTTCAGCATCTTGCTTGGAGAAAAAATTTAGATTCTTTTAAAAAAATTAC
TGTTCACCAGGAGCAGATGAGCTCAGACTTAGAATTCAATATCCGAACTGTTAAGACATTCTTTCAAATATAGTCTATAG
GGTGGGAGTGCATATAAGAAATCATCGAAGAGGTCATGCCACAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAAAGTCC
AAGAGAATGTACGTGTACATATGAATCATGTAAATGGTGAGTAATATGTAGGACAGTTACAACCATCGATAATACGAACC
AAACCGTATATGAATGTATTACATTGGACCCCGGGAGCATCTAATAAGGTGCTCGAAGTATTTGAGAAGGGCATTAGAGC
CCTGAAACATGGGTGTGGTAACTAAATAGACGTGAATATCTTTGCAAGATGTCCAAAGAAACGTAACCAAATGATTCACG
GAAAATGGATGTCCAACGCGGAAAATGGTCAGGATGCCCTGCACCAAGGTGAGCACACTTAAACGTGCAAAATTATTATT
ACCGTCTTTTTTGAACTTCTCTTTTGCAAAGTTTAACCTCTTTCTAGATTTTAGAACAAAGTTGAACTATTCTCATGCAA
AGTTTGCAAAACATGAT---------ACCATTTGGCGAGCTAATAAAAACATGATACCATGCCTTGGCCCAAGTAGTACT
CCCTCACTCCCAGTCTCACTTGTAGAGAAAAAAACTTGTGGAGAAATCCCCTTTCCTCTGACTCTGAGAAATCCCCCAGA
TCCAAAAATCATGGACGGCGACAGGCCGACTACGGCGGCCGC---GGCCGCGTCGGTGAGGTCGGTGCTCGGCGACGACG
ACCTCTTCCGCGAGATCCTCCTCCGCCTCGGCTTCCCCAACTGCCTCGTCCGCGCCTCCCTCGTCTCCAAGCGGTGGCTC
CTCCACGCCTCCGACCCGGCCTTGCTCCGCCTCTTCCGCGAGCGCCACCCACCCCGCCTCCTTGGCTTCTGCGTCAGCAA
CGACGCCC------------GGTATCAGTTCGTGCAGCTCGAGCAGTCCCCGGAGCTCGCCGCTCTCTCACGCCGTGTGG
CCTCCTCCTGCAACGCCGCCTTCGGCTGCCGTGGGCC------GGGTATCGGACACAGCCGGAACGGCCGCCTCATCACC
ACGCTCTTCCAC------------------GGCGGAAGGGTCAA------GCACTCTCTCCTCGCGCCGCTGCTCTCCGG
GGAGTCCGAGGTGGTCCTCTCCT----CCCACCGATCCCGCCGCCCCACATT---GA---------GTCCGCTGGAGGGG
TGTTCACTATGATTTTCCTAACCGAGGATGGGAGCCGCGGCGGCATCACCTTGGTATATCTGTGGCAGGTCCA-------
------GCGGAAAGTCCGTGCGGAAGTATACGTGCTGGGATCCGGCGGTTGGGGCTTCCCTGCCACCGCAATGACAG-AG
GTCCCGAATCCTGCAGCCTTCCTTACAAAAA-------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr3D_1058
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---------------------------AAAAAAACTTGCAGAGAAATCCCCTTTCT------TCTGAGAAATCCCCCAGA
TCCAAAAATCATGGACGGCGACAGGCCGACTCCGGCGGCCGC---GGCCGCGTCGGTGAGGTCGGTGCTCGGCGACGACG
ACCTCTTCCGCGAGATCCTCCTCCGCCTCGGCTTCCCCAACTGCCTCGTCCGCGCCTCCCTCGTCTCCAAGCGGTGGCTC
TTCCACGTCTCCGACCCGGCCTTCCTCTGCCTCTTCCGCGAGCGCAACCCGCCCCGCCTCCTCGGCTTCTGCGTCAGCAA
CCGCAGTCCCCAGTGCCCCTGGTATGAGTTCGTGCAGCTCCCGCAGTCCCCGGAGCTCGCCGCCCTCGTACGCCGCGGGG
CCTCCTCCTGCAACGACGCCTTCCGCCGCAGCTGCCAATGCCAGGGTATCCAACACGTCCGGAACGGCCGCCTCATCGCC
TGGTTCTCCAAC------------------GACGGAAGGCTCAA------GCACTCCATCCTCGCGCCGCTGCTCGCCGG
GGAGTCCGAAGTGGTCCTCCCGCCGACCCCGCCGATCTCACCGCCCCACCGGGAGGA---------GCCCGCTCTAGGGG
TGTTCAGTAGGATTATCCTACCCGAGGATGGGAGCCGCGGCTTCATCACCTTGGTATATCTGTGGCAGGTCCG-------
------GCGGAATGTCCGTGCGGAAGTGTACGTGCTGAGATCTGGCGGTTGGGGCTTCCCTGCCACCGCAATGACAGGAG
GTCCCGAATGCTGCAGCCTTCCTTACAAAAA-------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr3B_1072
AGAAACCCCCCCT-------------------------------------------------------------------
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------------------------------------------------CCCTGTCT------CTGCAAAAATCCCCCAAA
ACAAC-----ATGGACGGCGATAGGCGGTCTCCGGCGGCGGCCGCGGCGGCATCGGCGGCATCGGTGCTTGACGACGACG
ACCTGCTCCGCGAGATCCTCCTCCGCCTCGGCTTCCCCACCTGCCTCGTTCACGCCGCCCTCGTCTCCAAGCGGTGGCTC
CTCCACGCCTCCGACCCGGTCTTCCTCCGCCGCTTCCGCGAGCGCAACCCGCCCCGCCTCCTCGGCTTCTGCATCCGCGG
CCTCGACG------------GGTATTCTTTCGTGCCGCTGCCACAGCCCCCGGAGCTCGCCGTCCCCATACACCGGGTGA
CCTCCTCCTGCGCAGCCGCCTTCTCCAACATCATCCATCTG------ATCAAGCACTGCCGGAACGGCCGCCTCATCACC
GAGTCCTTCCAC------------------CACAAGGGAACAGA---CAGGCATGCCCTCCTTGCGCCGCTGCTCGCCGG
GGAATCCGCAGCCTTCCCCCCGCCCAACCCG---------CCACCCTCCCGT---GATTGGGACGGGCGCGCTCAAGTCA
GATACATTGAGGTGTTCCTACCCGAGGATGGGGGCCTCGACGGCATCACCTTGGTGCATCTCTGGAATGTCGGTCGGAAA
ATCTATGCGGAG-------------GTGTGCGTCCTGGGGTCCGACGGATGGGGCGTCCCTGCCAGCGCAGAGATGG-AG
CTCCC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr3D_1112
CC------------------------------------------------------------------------------
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------------------------------------------------------------------------------AA
AAATC-----ATGGACGGAGATCGACGGACGCCGGCGG---CCGCGGCCGCATCGGCGGCATCGGTGCTTGACGACGACG
AACTCCTCCGCGAGATCCTCCTCCGCCTCGGCTTCCCCACCTGCCTCGTCCGCGCCGCCCTCGTCTCCAAGCGGTGGCTC
CACCACGCCTCCGACCCGGCCTTCCTCCGCCGCTTCCGCGACCGCAACCCGCCCCGCCTCCTCGGCTTCTGCCTCTGCTT
CTCCGGCC------------GGTACCGGTTCGTGCCGTTCCCGCAGCCCCCGGAGCTCGCCGCTCCCATTCGCCGGGCGA
CCTCCTCCTGCACCGCCGCCTTCGCCCGCAGAATCCTGCCA------ATCAAGCACTGCCGGAACGGCCGCCTCATAATA
GAGTTCTTCAAC------------------GACGGCAGATTCGA------TTACTC---CCTGGCTCCGCTGCTCGCCGG
GGAGCCCGTAGCCGTCCTCCCGACGACCCCG---------CTACCCCACCTT---GACTGGGACAC---CACTCAAGGTA
GATTGGTTCAGATGTTCCTGCCCGAGGATGGGGGTCGCAACGGCATCACCTTGCTGTATCTCTGGGCGGTCCG-------
------GCGAAAAGTGTACGCCGAGGTGTACGTCCTGGGATCCGGCGGATGGGGCGTCCCTGCCACCGC-----------
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-------------------------------------------------------------------------------
>chr3D_1115
AA------------------------------------------------------------------------------
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--AAC-----ATGGACGGCGATGGACCGCCGCCGGCGGCCC---CGGCCCCATCGGTGGCGTCGGTGCTCGGCGACGACG
ACCTCTTCCGCGAAATCCTCCTCTTCCTCGGCTTCCCCAACCTCCTCGTCCGCGCCGCCCTCGTCTCCAAGCGGTGGCTC
CTCCACGCCTCCGATCCGGTCTTCCTCCGCCGCTTCCGCGAGCGCAACCCGCCCCGCCTGCTCGGATTCTACGCCGGCTA
CCCCGGCC------------GGTATCAGTTCGTGCCGCTCCCGCAGCCCCGGGAGCTGGTCGCCCTCTCGCGCCGCCCGG
CCTCCCCCTGCGACGGCGCCTTCGCCCGCGGAGCCGAGCGACTCATC------CACTGCCGGAACGGCCGCCTCCTCACC
GCGTTCCGCAGCCGCTGGCGCCAGCTACGCGGCGGCAGATTCAA------GCACTATCTCCTGGCGCCGCTGCTCGCCGG
GGAGGCCCCAACCGTCCTCCCACCGGCACCG---------CCGCCCACCCAT---GA---------GCGCGCTCAAGCGA
GATTCACCCAGATGTTCCTTCCAGAGGATGGGGCCCGCGACGGCATCACCTTGGTGCATCTCTTGATGGTCAGCCGAAAA
GTCTATGCCGAA-------------ATATACGCCCTGGGATCCGGCGGATGGGGCGTCCCTGGCACCGCGGTGATAG-AG
GT------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr3A_1115
AA------------------------------------------------------------------------------
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--AAT-----ATGGACGGCGATAGGCGGTCTCCGGCGGCGGCCGCGGCCGCATCGGCGGCATCGGTCCTCGGCGACGACG
ACCTGCTCCGCGAGATCCTCCTCCGCCTCGGCTTCCCCACCTGCCTCGTCCGCGCCGCCCTCGTCTGCAAGCGGTGGCTC
CTCCACGCCTCCGACCCGGCCTTCCTCCGCCGATTCCGCGAGCGCAACCCGCCCCGCCTCCTCGGCTTCTGCCTCCGCGG
CCTCGACG------------GCTATTCTTTCGTGCCGCTGCCACAGCCCCCGGAGCTCGCCGTCCCCATACACCGGGCGA
CCTCCTCCTGCGCCGCCGCCTTCGCCAACAACATCCATCTA------ATCAAGCACTGCCGGAACGGCCGCCTCATCACC
GAGTCCTTCCAC------------------AACAAGGCAACAACACGCAGGCACGCCCTCCTTGCGCCGCTGCTCGCCGG
GGAATCCGCAACCTTCCCCCCGCCGAACCCG---------CCACACTCCCGT---GACTGGGACGGGCGCGCTCAAGTCA
GATTCATTGAGGTGTTCCTACCCGAGGATGGGGGCCTCGACGGCATCACCTTGGTGCATCTCTGGAATGTCGGTCGGAAA
ATCTATGCGGAG-------------GTGTGCGTCCTGGGGTCCGACGGCTGGGGCGTCCCTGCCAGCGCAGAGATGG-AG
CTCCC---------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr3A_1142
--------------------------------------------------------------------------------
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-------------------------------ACGGCGG---CCGCGACCGCATCGGTGTCATCGGTGCTCGGCGACGACG
ACCTCTTCCGCGAGATCCTCCTCCGCCTCGGCTTCCCCAATTGCCTCGTCCGCGCCTCCCTCGTCTCCAAGCGGTGGCTC
TTCCACGCGTCCGACCCGGCCTTCCTCCGCCTCTTCCGCGAGCGCCACCCACCCCGCCTCCTCGGCTTCTGCGTCAGCAA
CGACGACC------------GGTACCAGTTGGTGCAGCTCGAGCAGTCCCCGGAGCTTGCCGCTCTCTCACGCCGTGTGG
CCTCCTCCTGCAACGACGCCTTCCGCTGCCGTGGGCT------GGGTATCGGACACAGCCGGAACGGCCGCCTCGTCACT
ACGCTCTTCCAC------------------GGC-----GGTCAA------GCGCTCCCTCCTCGCGCCGCAGCTCTCCGA
GGAGTCCGAGTTGGCCCTCCCACCGATCCCG---------CCGCCCCACCGGGAGGA---------GCCCGCTCTAGGGG
TGTTCAATAGGATTATCCTACCCGAGGATGGGAGCCGCGACTTCATCACCTTGGTATATCTGTGGCAGGTCCG-------
------GCGGAA-------------GTGTACGTGCTGAGATCCGGTGGTTGGGGCTTCCCTGCCACCGCAATGACAG-AC
GTCCCGAATCCTACAGCCTTCCTTACAAAAA-------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr3B_1145
--------------------------------------------------------------------------------
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----------------------------------GCGGCTC---CGGCCCCATCGGTGGCGTCGGTGCTCGGCGATGACG
ACCTCTTCCGCGAGATCCTCCTCTGCCTCGGCTTCCCCAACCTGCTCGTCCGCGCCGCCCTCGTCTCCAAGCGGTGGCTC
CTCCACGCCTCCGATCCGGTCTTCCTCCGCCGCTTCCGCGAGCGCAACCCGCCCCGCCTGCTCGGATTCTACGCCGGCTA
CCCCGGCC------------GGTATCAGTTCGTGCCGCTCCCGCAGCCCCCGGAGCTGGCCGCCCTCTCGCGCCGCCCGG
CCTCCCCCTGCGACGGCACCTTCGCCCGCGGAGCCGAGCGACTCATC------CACTGCCGGAACGGCCGCCTCCTCACC
GCGTTCCGCAGCCGCTGGCGCCAGCTACGCGGCGGCAGATTCAA------GCACTATCTCCTGGCGCCGCTGCTCGCCGG
GGAGTCCCCAACCGTCCTCCCACCGGCACCG---------CCGCCCACCCAT---GA---------GCGCGCTCAAGCGA
GATTCACCCAGATGTTCCTACCCGGGGATGGGGGCCGCGACGGCATCACCTTGGTGCATCTCTTGATGGTCGGCCGAAAA
GTCTATGCGGAA-------------GTGTACGCCCTGGGATCCAGCGGATGGGGCGTCCCTGGCACCGCGGTGA------
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-------------------------------------------------------------------------------
>chr3A_1148
GCCG----------------------------------------------------------------------------
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----------------------------------------C---CGGCCGCATCGGTGGCGTCGGTGCTCGGCGACGACG
ACCTCTTCCGCGAGATCCTCCTCTGCCTCGGCTTCCCCAACCTCCTCGTCCGCGCCGCCCTCGTCTCCAAGCGGTGGCTC
CTCCACGCCTCCGATCCGGTCTTCCTTCGCCGCTTCCGCGAGCGCAACCCGCCCCGCCTGCTCGGATTCTACGCCGGCTA
CCCCGGCC------------GGTATCAGTTCGTGCCGCTCCCGCAGCCCCCGGAGCTGGCCGCCCTCTCGCGCCGCCCGG
CCTCTTCCTGCGACGGCGCCTTCGCCCGCGGAGCCGAGCGACTCATC------CACTGCCGGAACGGCCGCCTCCTCACT
GCGTTCCGCAGCCGCTGGCGCCAGCTACGCGGCGGCAGTTTCAA------GCACTATCTCCTGGCGCCGCTGCTCGCCGG
GGAGGCCCCAACCGTCCTCCCACCGGCACCG---------CCGCCCATCCA------------CGGGCGCGCTCTAGCGA
GATTCACCCAGCTGTTCCTACCCGAGGATGGGGGCCGCGACGGCATCACCTTGGTGAATCTCTTGATGGTCGGCCGAAAA
GTCTATGCGGAA-------------GTGTACACCCTGGGATCCGGCGGATGGG---------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr1D_1775
ACAAAT--------------------------------------------------------------------------
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------------------------------ACTAGATGACTCGTTGCGTCAATGGTGCAAAGGGCGAGAGGGAGACAACT
ATTGTGAGAATATTCAGACACCCAAGTCTTTACTATTGGTACATAGATGATTAGTTACAATGTGGTACACAAAGGAAGTA
GATAGGAAGGGATAGATTATTAGCTTATGAAAACCAAACATGGCCAACACTGCCGCATCCTCTGCTTGGAAGCCGCCTTT
TCTCACCGGATCTAACATAGATACATGATCACAAAAGGAAGCAAGACCATCATATATAATGGTCTACTTACTCATTCAGG
TTAGTGATCAGGTGGCCGGAACCGCAAAGTATAATGGGGCTTGACGGACAATAAAAATAGGTGTTTCTCCTCGTCTCC--
-TCCTCCTCCTGAGTCTGGATCGAGGCCTCGCTCCTCTCTTCTCCTGAATGACAGCTTGAAGGAAAGGACACACAAAAGC
GCAGTCCTATACATTGACTAACCTGACAGAAAA-TAGAGACAAATGTAGATATGGTTATCTATTATGCCGCTGATAAAAA
AGTAAAACACTAAACAG-AGACAAATAGAAGAATAGTGAGGACTGGAGTAACCTCTACATAATAATTCAGATTGCATCAC
TGAACATATGAATGACAGAGAGCCCCAAAGAAATTGGCTTTATCAGGTATATGAATGACATTACAGAGAGAATTACCAA
>chr1D_1779
--------------------------------------------------------------------------------
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----------------------------AAACTAAATGACTCGTTGCGCCAATGGCGCAAAGGGCGAGAGGGAGACAACT
ATTGTGAGAATATTCAGACACCCAAGTCTTTACTACTGGTACATAGATGATTAGTTACAATGTGGTACACAAAGGAAGTA
GATAGGAAGGGGTAGATTATTAGCTTATGAAAACCAAACGTGGCCAACACTGCCGCATCCTCTGCTTGGAAGCCGCCTTT
TCTCACCGGATCTAACAAAGATACATGATCACAAAAGGAAGCAAGACCATCATATATAATGGTCTACTTACTCATTCAGG
TTAGTGATCAGGTGGCTGGAACCGCAAAGTATAATGGGGCTTGACGGACAATAAAAATAGGTGTTGCTCCTCGTCTCC--
-TCCTCCTCCTGAGTCTGGATCGAGGCCTCACTCCTCTCTTCTCCTGAATGACAGCTTGAAGGAAAGGACACACAAAAGC
GCAGTCCTATACATTGACTAACCTGACAGAAAA-TAGAGACAAATGTAGATATGGTTATCTATTATGCCGCTGATAAAAA
AGTAAAACACTAAACAG-AGACAAATAGAAGAATAGTGAGGACTGGAGTAACCTCTACATAATAATTCAGATTGCATCAC
TGAACATATGAATGACAGAGAGCCCCAAAGAAATTGGCTTTATCAGGTATATGAATGACATTATAGAGAGAATTACCAA
>chr7D_1780
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------AACTAGATGACTCGTTGCGCCAATGGCGCAAAGGGCGAGAGGGAGACAACT
ATTGTGAGAATATTCAGACACCCAAGTCTTTACTATTGGTACATAGATGATTAGTTACAATGTGGTACACAAAGGAAGTA
GATAGGAAGGGACAGATTATTAGCTTATGAAAACCAAATGTGGCCAACACTGCCGCATCCTCTGCTTGGAAGCCGCCTTT
TCTCACCGGATCTAACATAGATACATGATCACAAAAGGAAGCAAGACCATCATATATAATGGTCTACTTACTCATTCAGG
TTAGTGATCAGGTGGCTGGAACCGCAAAGTATAATGGGGCTTGACGGACAATAAAAATAGGTGTTGCTCCTCGTCTCC--
-TCCTCCTCCTGAGTCTGGATCGAGGCCTCGCTCCTCTCTTCTCCTGAATGACAGCTTGAAGGAAAGGACACACAAAAGC
GCAGTCCTATACATTGACTAACCTGACAGAAAA-TAGAGACAAATGTAGATATGGTTATCTATTATGCCGCTGATAAAAA
AGTAAAACACTAAACAG-AGACAAACAGAAGAATAGTGAGGACTGGAGTAACCTCTACATAATAATTCAGATTGCATCAC
TGAACATATGAATGACAGAGAGCCCCAAAGAAATTGGCTTTATCAGGTATACGAATGACATTACAGAGAGAATTACCAA
>chr5D_1780
--------------------------------------------------------------------------------
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-----------------------------AACTAGATGACTCGTTGCGCCCATGACGCAAAGGGCGAGAGGGAGACAACT
ATTGTGAGAATATTCAGACACCCAAGTATTTACTATTGATACATAGATGATTAGTTACAATGTGGTACACAAAGAAAGTA
GATAGGAAGGGATAGATTATTAGCTTATGAAAACCAAACGTGGCCAACACTGCCGCATCCTCTGCTTGGAAGCCGCCTTT
TCTCACCGGATCTAACACAGATACATGATCACAAAAGGAAGCAAGACCATCATATATAATGGTCTGCTTACTCATTCAGG
TTAGTGATCAGGTGGCTCGAGCCGCAAAGTATAATGGGGCTTGACGGACAATAAAAATAGGTGTTGCTCCTCGTCTCC--
-TCCTCCTCCTGAGTCTGGATCGAGGCCTCGCTCCTCTCTTCTCCTGAATGACAGCTTGAAGGAAAGGACACACAAAAGC
GCAGTCCTATACATTGACTAACCTGACAGAAAA-TAGAGACAAATGTAGATATGGTTATCTATTATGCCGCTGATAAAAA
AGTAAAACACTAAACAG-AGACAAATAGAAGAATAGTGAGGACTGGAGTAACCTCTACATAATAATTCAGATTGCATCAC
TGAACATATGAATGACAGAGAGCCCCAAAGAAATTGGCTTTATCAGGTATATCAATGACATTACAGAGAGAATTACCAA
>chr7D_1781
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------ACTAGATGACTCGTTGCGCCAATGGCGCAAAGGGCGAGAGGGAGACAACT
ATTGTGAGAATATTCAGACACCCAAGTTTTTACTATTGGTACATAGATGATTAGTTACAACGTGGTACACAAAGGAAGTA
GATAGGAAGGGATAGATTATTAGCTTATGAAAACCAAACGTGGCCAACACTGCCGCATCCTCTGCTTGGAAGCCGCCTTT
TCTCACCGGATCAAACATAGATACATGATCACAAAAGGAAGCAAGACCATCATATATAATGGTCTACTTACTCATTCAGG
TTAGTGATCAGGTGGCTGGAACCGCAAAGTATAATGGGGCTTGACGGACAATAAAAATAGGTGTTGCTCCTCGTCTTCTC
CTCCT---CCTGAGTCTGGATCGAGGCCTCGCTCCTCTCTTCTCCTGA---ACAGCTTGAAGGAAAGGACACACAAAAGC
GCAGTCCTATACATTGACTAACCTGACAGAAAA-TAGAGACAAATGTAGATATGGTTATCTATTATGCCGCTGATAAAAA
AGTAAAACACTAAACAG-AGACAAATAGAAGAATAGTGAGGACTGGAGTAACCTCTACATAATAATTCAGATTGCATCAC
TGAACATATGAATGACAGAGAGCCCCAAAGAAATTGGCTTTATCAGGTATATGAATGACATTACAGAGAGAATTACCAA
>chr7D_1781
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------ACTAGATGACTCGTTGCGCCAATGGCGCAAAGGGCGAGAGGGAGACAACT
ATTGTGAGAATATTCAGACACCCAAGTCTTTACTATTGGTACATAGATGATTAGTTACAATGTGGTACACAAAGGAAGTA
GATAGGAAGGGATAGATTATTAGCTTATGAAAACCAAACGTGGCCAACACTGCCGCATCCTCTGCTTGGAAGCCGCCTTT
TCTCACCGGATCTAACATAGATACATGATCACAAAAGGAAGCAAGACCATCATATATAATGGTCTACTTACTCATTCAGG
TTAGTGATCAGGTGGCTGGAACCGCAAAGTATAATGGGGCTTGATGGACAATAAAAATAGGTGTTGCTCCTCGTCTCCTC
CTCCTCCTCCTGAGTCTGGATCGAGGCCTCGCTCCTCTCTTCTCCTGAATGACAACTTGAAGGAAAGGACACACAAAAGC
GCAGTCCTATACATTGACTAACCTGACAGAAAA-TAGAGACAAATGTAGATATGGTTATCTATTATGCCGCTGATAAAAA
AGTAAAACACTAAACAAAAGACAAATAGAAGAATAGTGAGGACCGGAGTAACCTCTACATAATAATTTAGATTGCATCAC
TGAACATATGAATGACAGAGAGCCCCAAAGAAATTGGCTTTATCAGGTATATGAATGACATTACAGAGAGAATTACCAA
>chr7D_1781
--------------------------------------------------------------------------------
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------------------------------ACTAGATGACTCGTTGCGCCAATGGCGCAAAGGGCGAGAGGGAGACAACT
ATTGTGAGAATATTCAGACACCCAAATCTTTACTATTGGTACATAGATGATTAGTTACAATGTGGTACACAAAGGAAGTA
GATAGGAAGGGATAGATTATTAGCTTATGAAAACCAAACGTGGCCAACACTGCCGCATCCTCTGCTTGGAAGCCGTCGTT
TCTCACCGGATCTAACATAGATACATGATCACAAAAGGAAGCAAGACCATCATATATAATGGTCTACTTACTCATTCAGG
TTAGTGATCAGGTGGCTGGAACCGCAAAGTATAATGGGGCTTGACGGACAATAAAAATAGGTGTTGCTCCTCGTCTCC--
-TCCTCCTCCTGAGTCTGGATCGAGGCCTCGCTCCTCTCTTCTCCTGAATGACAGCTTGAAGGAAAGGACACACAAAATT
GCAGTCCTATACATTGACTAACCTGACAGAAGA-TAGAGACAAATGTAGATATGGTTATCTATTATGCCGCTGATAAAAA
AGTAAAACACTACACAG-AGAAAAATAGAAGAATAGTGAGGACTGGAGTAACCTCTACATAATAATTCAGATTGCATCAC
TGAACATATGAATGACAGAGAGCCCCAAAGAAATTGGCTTTATCGGGTATACGAATGACATTACAGAGAGAATTACCAA
>chrUn_1781
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------------------------------ACTAGATGACTCGTTGCGCCAATGGCGCAAAGGGCGAGAGGGAGAAAACT
ATTGTGAGAATATTCAGACACCCAAGTCTTTACTATTGGTACATAGATGATTAGTTACAATGTGGTACACAAAGGAAGTA
GATAGGAAGGGATAGATTATTAGCTTATGAAAACCAAACGTGGCCAACACTGCCGCATCCTCTGCTTGGAAGCCGCCTTT
TCTCACCGGATCTAACATAGATACATGATCACAAAAGGAAGCAACACCATCATATATAATGGTCTACTTACTCATTCAGG
TTAGTGATCAGGTGGCTGGAACCGCAAAGTATAATGGGGCTTGACGGACAATAAAAACAGGTGTTGCTCCTCGTCTCC--
-TCCTCCTCCTGAGTCTGGATCGAGGCCTCGCTCCTCTCTTCTCCTGAATGACAGCTTGAAGGAAAGGACACACAAAAGC
GCAGTCCTATACATTGACTAACCTGACAGAAAAATAGAGACAAATGTAGATATGGTTATCTATTATGCCGCTGATAAAAA
AGTAAAACACTAAACAG-AGACAAATAGAAGAATAGTGAGGACTGGAGTAACCTCTACATAATAATTCAGATTGCATCAC
TGAACATATGAATGACAGAGAGCCCCAAAGAAATTGGCTTTATCAGGTATATGAATGACATTACAGAGAGAATTACCAA
>chr4D_1781
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------------------------------ACTAGATGACACGTTGCGCCAATGGCGCAAAGGGCGAGAGGGAGACAACT
ATTGTGAGAATATTCAGACACCCAAGTCTTTACTATTGGTATATAGATGATTAGTTACAATGTGGTACACAAAGGAAGTA
GATAGGAAGGGATAGATTATTAGCTTATGAAAACCAAACGTGGCCAACACTGCCGCATCCTCTGCTTGGAAGCCGCCTTT
TCTCACCGGATCTAACATAGATACATGATCACAAAAGGAAGCAAGACCATCATATATAATGGTCTACTTACTCATTCAGG
TTAGTGATCAGGTGGCTGGAACCGCAAAGTATAATGGGGCTTGACGGACAATAAAAATAGGTGTTGCTCCTCGTCTCC--
-TCCTCCTCCTGAGTCTGGATCGAGGCCTCGCTCCTCTCTTCTCCTGAATGACAGCTTGAAGGAAAGGACACACAAAAGC
GCAGTCCTATACATTGACTAACCTGACAGAAAA-TAGAGACAAATGTAGATATGGTTATCTATTATGCCGCTGATAAAAA
ATTAAAACACTAAACAG-AGACAAATAGAAGAATAGTGAGGACTGGATTAACCTCTACATAATAATTCAGATTGCATCAC
TGAACATATGAATGACAGAGAGCCCCAAAGAAATTGGCTTTATCAGGTATATGAATGACATTACAGAGAGAATTACCAA
>SNPs
--------------------S-----------------------------------------------------------
----------------------------------------------------SS----S---------------------
-----------S-----------S------------------------S-------------------------------
--------------------------------------------------------------------------------
---------------------S--------------------------------S---------------------S---
-------------------------S----------------S-------------------------------------
-------------------------S---------------S---------------------S-S--------------
-----------------------S------------S------------------S----------------S-------
--------------------------------------------------------------------------------
----------------------S-------------------------------S------S-----------S---S--
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------S-----
-----SSSS-SS-SSS-SSSSSSSSS------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------S-----------------------------
--S------------------------------------------------------------S-----S----------
----------------------------------------------------------------------------S---
---S-----S-------------------------------------------S---------------S----------
-------------------------------S--------------S---------SS---S-------S----------
--------------------------------------------------------S-----------------------
---S-S--------------------------------------------------------------------------
-S-------------------------S----------------------------------------------------
-----------S--------S---------------------------------------------------S-----S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S---------------------------------------------S----S-------
------------------------------------------S-------------------------------------
-S---------------------------S-------------------------------------------------
>forward_21
-GCCATTCTTGTCTCCCCACT-----------------------------------------------------------
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>reverse_2028
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---------------------------CGAAAACCAAACGTGGCCAA---------------------------------
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-------------------------------------------------------------------------------
