>input_sequence_79481
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--------------------------------------------------------------------------------
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-----------ATGGCCCCCAAGGCAGACAAGAAGCCGGCGGCCGAGAGCAAGGTGGAGAAGGCGGCCGAGAAGACCCCC
GCGGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGGCCGGCGGCGAGGGCAAGAC
CCGGGGCCGCAAGAAGGGCAGCAAGGCGAAGAAGGGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAGG
TGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCC
GGGGAGTCGGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACGTCCCGGGAGATCCAGACCTCCGTCCGCCTCGT
CCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCCTAG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr1A_1_TraesCS1A01G361600
TCGGTTTTTTTCGGTAACCGCATTTCCCACCTCTTAGGCTTAGGATTCGGTAGCCAAAACCTT-GGGTCGTAGTACTTCT
CGTGTTGCTGTGTGGTTGAGCTCCGGAATGAAAGAAGCTGTAAGCCTGTGTATGTACGACATTCGTCAACCCTAAGTACT
ACAATCTCCATTTTTTCGCAAAAG-AAAAACCAAATAAACCTACCCTAAAAAGAATAA---GAAAATCAAGCAAAGCTGG
TTCTTGACCTTAAAAAAAAGG--CTGCCCATCCTATTTCTACATTCCTCAAGAAACAAGTTGGCTTCACCCTTTTCTAGA
AAAAAAGAAGAGAAAAATGCTTATCTCGCAAAAAAAAAAGAGAA-AACAATGCTTGTA---CATATACAGG-----TTTG
GGGTAGGAAAT--------AGTACAACAAAGCAAATATACTCGCAAAAAATAAAAGCAA---------------------
----ATACATTTGCATCACATGCCGCCTTGTTCTACGATGCCTTGGATGTGCTTTGCGGTTCGAGAGCGGGACGATCGAT
ACGAAATATACGGTTAAGATCTGTCCGGCGAGGCAAACAGAACGCGCATCCTATCGGTCCACGTCAGCGATCCGGGGCGC
CAACCCCTCCACCAATCAGCGCCCACCTCCCCCCCTCTATAAATCCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCACCCACCCTCCTCAATTCCCCAC
ACCATCTCAGCCCCCACCTCCCCTGCCTCTCTCCAGCAAACT--CACGCCCCCCACCACCGAAGCTCCCAACCCCACCCG
AAGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCGGCCGAGAGCAAGGTGGAGAAGGCGGCCGAGAAGACCCCC
GCGGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGGCCGGCGGCGAGGGCAAGAC
CCGGGGCCGCAAGAAGGGCAGCAAGGCGAAGAAGGGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAGG
TGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCC
GGGGAGTCGGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACGTCCCGGGAGATCCAGACCTCCGTCCGCCTCGT
CCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCCTAGACTGACG
ACGCGCCGCTTGTTGTGACAGATGTGGCCGTCTGCTGTATCTG-----TAGTCGCTGTTGACTCTGCTTATCT--CCATC
TGCAAGTAGTGGTAGCTGTAGTGCGC---GTGCTGGGTGATGATTGCCAACGCTTTGTTGGCTGGTTGGATG----TAAG
AACTGAACGTGTTGCTTTTGCAAACTGATGAAATCTATCTAGAAAATGTCGCAGTTGTGGTACTAC--------------
--ATGATATTACTAATGCTGTC--ATTTCTACTCTTATAAAC-----------------CGA----------------GC
CTTTTCATTTTATTTGCAC-AAGTAGTGCCATTACTGGTTCGGAAGCGCTGATTGCTTGCCGAATCTTGTTTTGCAAACT
GAGATGGGATTTAGAGTGTTGCATTTCCGCTGCTAGTAATTACGATCAGTCCGACCTGATTTGTACCAGTAGCAAGTGCC
TGTACTAATCTCCGCCATGTGTTTGTA-------GCAACACAAGTTAAGTTTTCAGATGAGATATCGCTTTCAGATTCTT
CTGAAACTGAACGCATCTATGTTT-----------------------------------------------GGCAAACTG
ATGATATGTGTATCTTTGTTGAACTCTGGTTATCTGCAAGTAGCAGTACTCTTCATGGATTGGAGTGGAAATTGCTGCAT
GGTGCTGCAACTTGTGCAAACTGATGATATGTGATTAAGAAATAATGATGCATTTCTGTTGCTGGTGATTTCTTCTGATG
ATAATCGCACTT--------------------------------------------------------------------
-------GTGTGATTATCGTTAACGTTTGCCTTGCCCTGTCCTGTTCTTGGTTCGGTACCCCAATAGTATATCAGTCAGT
TCTGCGCGCTACTCTGAAATTGCCAAACGTAAGTCGTTTTGCATTGCTTGTTGGATAAACAAGACGAGGTTCTAGAGCGA
TGCTTCTTTGCGTTTATTTTCTCGCTGTTTACTGAAGAAAACTTGCATGCCGTTTTGTGCACAAAAGATTGTGGCCGTAG
GTTCAGACTTGGCAGCATCTGAAGATGGATTGGTAACTTTTTTGTGACCGGCCAGCGCCACGGTAGTA
>chr1D_9
TTTCAG-------GTAACCGCATTTCCCAACC------CTTAGGATTCGGTAGCCAAAACCTT-GGGTCGTAGTACATCT
CGTGCTGCTGTGTGGTTGAGCTCCGAAATGGAAGAAGTTGTAAGCCTGTGTATGTACGACATTCGTCCACCCTAAGTACT
ACAATCTCCATTTTTTCGCAAAAG-AAAT--CAAATAAACCTACCCTAAAAA----AA---GTAAATCAAGCGAAGCTTT
TTTTTGACCTTAAA---AAGG--CTGCCCGTCCTATGTCTACATTCCTCAAGAAACAAGGAGGCTTCACCCATTTCTAGA
AAAAAAGATGTGAAAAATGCTTATCTCGCAAGAAAAAG-GAGAA-AAAAATGCTTGTACTTCATATACAGG-----TTTG
GGGTAGGAAAT--------AGCACAACAAAGCAAATATACTCGCAAAAAAGAAAAGCAATGG------------------
-----------------------CGCCTTATTCTACGATGCCTTGGATGTGCTTTGCGGTTCGGGAGCGGGACGATCGAT
ACGAAATATACGGTCGAGATCTGTCCGGCGAGGCAAAGAGAACGCGCATCCTACCGCTCCACGTCAGCGATCCGAGGCGC
TACCCCCTCCACCAATTAGCGCCCACCTCTCCCCCTCTATAAATCCC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------AGCACCCATCCTCCTCCATTCCCCAC
ACCATCCCAGCCCCCACCTCC----CCTCCCTCCAGCAAACT--CACGCATCCCACCACCGAAGCTCCCAACCCCACCCG
AAGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCCGCCGAGAACAAGGTCGAGAAGGCGGCGGAGAAGACCCCC
GCGGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGGCCGGCGGCGAGGGCAAGAC
CCGGGGCCGCAAGAAGGGCAGCAAGGCCAAGAAGGGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAGG
TGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCC
GGGGAGTCGGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGT
CCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCCTAGACTGAAG
ATGCGCCGCTTGTTGTGCCAGATGTGGCTGTCTGATGTATCTC-----T----GCTGTTGACTCTGCTTACCT--GCAAG
TAGAAGTAGTGGTAG------TAGTTCGTGTGGTAGA---AGATTGCCAACGCTTTGTTGGCTTCTTGGTTG----TGAG
AACTGAACGTGTTGCTTTTGCAAAATGA---AATCTATCTAGAAAATGTTGCGGTTGTGGTACTACTACATCTATGTCAC
CGATGTTCGTACTAATGCTGGC--TTTTCTACTCATCTAAGC-----------------TGAATACAGCCATGTTTGTGC
ATCTGTGTTTTAGC------------TGCAAGTAGTAGTTCGGAATGGCTGATTGCTTGCCGAATCTTGTTTTGCAAACT
GAGACGGGATTCAGAGTGACGCATTGCCACCGCTAGTGATTACT-TCATTCCGACCTGATCTGTACCAGTAGTAAGTGCT
TGTACTAATCTCTGCCATGTGTTTGTA-------GCAATGCAAGTTCAGCTTTCAGATGAGATCTCGCTTTCAGATTCTT
CTGAAACTGAACGCATCTATGTTTGCCCATCTGTACTACC--ATCTTTGTGAACTGAACACCGCCATGTTTGGCAATCTG
ATGATATGTGTATCTTTGTTGAACTCTGGTTATCTGCAAGTAGTAGTACTCTTCCTGGATTGGAGTGGAAATTGCTGCAA
CTTG-TGCAAA---------CTGCTGATATGTGATTAAG-AAATATGTGATTAAGAAACT--------------------
-----------------GCTTGTAATGATCTGCCATGTGTTTGCGCT--------GTCACTGAGCGCCCTGCCTACTCAA
TTTCCGCGTGTGATTGCCATTAACGTTTGCCTTGCCCTGTCCTGTTCTTGGTTCGGTACCCCAATAGTATATCAGTCAGT
TGTGCGCGCTACTCTGAAAATGCGAAACGTAAGTCGTTTTGCATTTCTTGTTGGAAAAACAAGATGAGGTTCTAGAGCGA
TGCTTCTTCGTGTTTATTTTCTCGCTGTTTACTGAAGAAAACTTGCTTGCCGTTTTGTGCACA-----------------
--------------------------------------------------------------------
>chr1B_40
---------------------------------------TTAGGATTCAGTAGCCAAAAACTTTGGGTCGTAGTACTTCT
CGTGCCGCTGTGTGGTTGAGCTCCGGAATGGAGGAAGTTGTAAGCCTGTGTATGTACGACATTCGTCCACCCTATGTACT
ACAATCTCCATTTTTTCGCAAAAGAAAAT--CAAATAAACCTACCCTAAAAA----AATAAGTAAATCAAGCGAAGCTTG
TTCTTGACCTTAAA---AAGAGACTGCCCGTCCTATGGCTACATTCCTCAAGAAACGAGGAGGCTTCACCCTTTTCTTAG
AAAAAGAGGA--AAAAATGCTTATCTCGCAAAAAAAAA-GAGAACAAAAATGCTTGTA---CATATACAGTATAGTTTTG
GGGTACTAGGAAATACTCCAGTACAACAAAGCAAATATACTGGCAAAAAGGAAAAGCAAATACACTCGCAAAAAAGAAAA
GCAAATACACTCGCATCACATGCCGCCTTGTTCTGCGACGCCTTGGATGTGCTTTGCGGTTCGGGAGCGGGACGACCGAT
ACGAAATATACGGTCGAGATCTGTCCCACGAGCCAAAGAGGACGCGCATCCTACCGCTCCACGTCACCGATCCGAGGCGC
CAACCCCTCCACCAATCAGCGCGCACCTCTCCCCCTCTATAAATCCC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------AGCACCCACCCTCCTCCATTCCCCAC
ACCATCCCAGCCCCCACCTCC----CCTGCCTCCAGCAAACT--CACAGCCCCCACCACCGAAGCTCCCAACCCCACCCG
AAGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCCGCGGAGAACAAGGTCGAGAAGGCGACGGAGAAGACCCCC
GCGGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGGCCGGCGGCGAGGGCAAGAC
CCGGGGCCGCAAGAAGGGCAGCAAGGCGAAGAAGGGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAGG
TGCACCCTGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCC
GGGGAGTCCGCCAAGCTGGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGT
CCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCCTAGACTGACG
ATGCGTCGCTTGTTGTGACAGATGTGGCTGTCTGATGTATCTGCAA----------------------------------
-----------GTAGAAGTAGTAGTTCGTGTGGTAGA---AGATTGCCAACGCTTTGTTGGCTTCTTGGTTG----TGAG
AACTGAACGTGTTGCTTTTGCAAACTGA---AATCTATCTAAAAAATGTTGCGGTTGTGGTACTACTACATCTGTGACAG
TGATGTTCTTACTAATGCTGGC--TTTTCTACTCATCTTAAGCTGAATACAGCCATGTTCGT----------------GC
ATTTGTGTTTTATCTGCAAGCAGTAGTACCGCTGCTGGTTCTGAATGGCTGATTGCTTGCTGAATCTTGTTTTGCAAATT
GAGATGGGATTTAGAGTGATGCATTCCCGCTGCTAGTGATTAAT-TCAGTCCGACCTGATTTGTACCAGTAGCAAGTGCT
TGTACTAATCTCTGCCATGTGTTTGTACTTTGTAGCAATGCAAGTTCAGCTTTCAGATGAGATCTCGCTTTCAGATTCTT
CTGAAACTGAACGCATCTATGTTTGGCCATTTGTACTAGTATATCTTTCTGAACTGAACACTGCCACGTTTGGCAAACTG
ATGATATGTGTATCTTTGTTGAACTCTGGTTATCTGCAAGTAGTAGTACTCTTCCTGGATTGGAGTGGAAATTGCTGCAT
GGAGCTGCAAC---------CTGCTGATATGCGATTAAG-AATAATGATGAATTTCTGTTGCTAGCGATTTCTTCTGTGA
TGCAATTCACACAGAGGGCTTGTAATAATCTGGCATGTGTTTGCGCTGTGCCGCTGTCACTGAGCGCCCTGCCTACTCAA
TTTCCGCGTGTGATTATCAATAACGTTTGCCTCGCCCTGTCCTGTTCTTGGTTCGGTACCCCAATAGTATATCAGTCAGT
TGTGC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr1A_886
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------AGCACCCACCCCGCTCCATTCCCCAC
ACCATCTCAGTCCCCACCTTT----C--CCCTCCAGCAAACT--CACACAACCCACCACCGAAGCTCCCAACCCCACCCG
AAGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCGGCCGAGAACAAGGTGGAGAAGGCGGCGGAGAAGACCCCC
GCGGGGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGGCCGGCGGCGAGGGGAAGAC
CCGGGGCCGGAAGAAGGGCAGCAAGGCGAAGAAGGGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAGG
TGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCC
GGGGAGTCGGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCAGGGAGATCCAGACCTCCGTCCGCCTCGT
CCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACATCCTCCTAGACTGACG
GCGTGCAGTTGGTTTCTGCAT-------------CTGCATCTG-----T----ACTCTTGACTCTGCTTATCTATCTATC
TGCAAGTAGTGGTGGTGGTAGTAGTACCTGTGCTGGG---TGATTGCCAACGCTTTGTTGGCCCGTTGGTTG----TAAG
AGCTGAAGTTGCTGCTTTGGCAAACTGA---AATCTATCTAGAA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr1D_886
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------AGCCCCCACCCCGCTCCTTTCCCCAC
ACCAACTCAGTCCCTACCTTT----CCCT--TCGAGCAAACTCACACAACCCACACCACCGCAGCCCCCAACCCCACCCG
AAGCAGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCGGCCGAGAACAAGGTCGAGAAGGCGGCGGAGAAGACCCCC
GCGGGGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGGCCGGCGGCGAGGCCAAGAC
CCGGGGCAGGAAGAAGGGCAGCAAGGCCAAGAAGGGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAGG
TGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCC
GGCGAGTCGGCCAAGCTCGCGAGGTACAACAAGAAGCCCACCATCACCTCCAGGGAGATCCAGACCTCCGTCCGCCTCGT
CCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCCTAGACTGACG
GCGTGCAGTTGGTTTCTGCAT-------------CTGCATCTG-----T----ACTGTTGACTCTGCTTATCTATCTATC
CGCAAGTAGTGGTAGCAGTAGTAGCACCTGTGCTGGG---TGATTGCCAACGCTTTGTTGGCCCGTTGGTTG----TAAG
AACTGAAGTTGCTGCTTTGGCATACTGATGAAATCTATCTAGAA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr1B_886
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------AGCACCCAT-CTCCTCCATTCCCCAC
A--ATCTCAGTCCTCATCTTC----CCTGCCTCCAGCAAACT--CACACATCTCACCACCGGAGCTCCCAACCCCACCCG
AAGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCCGTCGCCGAGAACAAGGTCGAGAAGGCGGCGGAGAAGACCCCC
GCGGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGGCCGGCGGCGAGGGGAAGAC
CCGGGGCAGGAAGAAGGGCAGCAAGGCCAAGAAGGGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAGG
TCCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCC
GGCGAGTCCGCCAAGCTCGCGAGGTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGT
GCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACATCCTCCTAGACTGATG
TCGCGTCGCTTGTTGCGACAGATGTAGTTGGCTGCTGTTGTCTCCTGTTAGTGGTCGCTGACTCTGCTTACG----TATC
TGCAAGTAGTGGTAG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr1B_888
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CACCCACCCCGCTCCATTCCCCAC
ACCATCTCAGTCCCCACCTTT----CCCT--TCCAGCAAACTCACGCAACCCCAC---CCGAAGCTCCCAACCCCACCCG
AAGCGGCCGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCCGCCGAGAACAAGGTGGAGAAGGCGGCGGAGAAGACCCCG
GCGGGCAAGAAGCCCAAGGCAGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGGCCGGCGGCGAGGCGAAGAC
GAGGGGCCGGAAGAAGGGCAGCAAGGCCAAGAAGGGCGTGGAGACTTACAAGATCTACATCTTCAAGGTGCTGAAGCAGG
TCCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCC
GGCGAGTCCGCCAAGCTCGCCCGTTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGT
CCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTGACCAAGTTCACATCCTCCTAGACTGACC
CTGCGTCGCTTGCTGT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr1B_893
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ACCCCGCTCCATTCCCCAC
ACCATCTCAGTCCCCACTTCCTG----CT--TCCAACAAACT--CACACAACCCACCACCGAAGATCCCAACTCCACCCG
AAGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCCGCGGCCGAGAACAAGGTCGAGAAGGCGGCGGAGAAGACCCCC
GCGGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGGCCGGCGGCGAGGCGAAGAC
CCGGGGCAGGAAGAAGGGCAGCAAGGCCAAGAAGGGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAGG
TGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCC
GGGGAGTCGGCCAAGCTCGCGAGGTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGT
CCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGTCGTCACCAAGTTCACATCCTCCTAGACTGACG
GCGTGTTGTTGGTTTCTGCAT-------------CTGTAG---------------TGTCGACTCTGCTTATCTATCTATC
TGCAAGTAGTGGTAGCAGTAGTAGTACCTGTGCTGGG---TGATTGCCAACGCTTTGTTGGCTCGTTGGTTGATTGTAAG
AACTGAAGTTGCTGCTCTGGCAAACTGA---AATCTATCTAAGAA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr1B_991
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-AGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCCGCGGCCGAGAACAAGGTCGAGAAGGCGGCGGAGAAGACCCCC
GCGGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACGGCGTCCAAGGAGGCCGGCGGCGAGGGGAAGAC
CCGGGGCCGGAAGAAGGGCAGCAAGGCGAAGAAGGGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAGG
TGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCC
GGCGAGTCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGT
CCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCTGTCACCAAGTTCACCTCCTCCTAGATTGACT
ATGCGTCGCTTGTTGTGATAGATGTAGTTGGCTGCTGTTA-------------GTCGCTGACTCTGCTTATG----TATC
TGCAAGTAGTGGTAGTAGTAGTCGTCTGTGTGCTGGC---TGATTGCCAACGTTTCGTTGGCTAGTTGGTTG----TTAG
AACTGAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr1B_991
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-AGCGGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCCGCCGAGAACAAGGTCGAGAAAGCGGCGGAGAAGACCCCC
GCGGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCAGGCAAGACGGCGTCCAAGGAGGCCGGCGGCGAGGCCAAGAC
GAGGGGCCGGAAGAAGGGCAGCAAGGCCAAGAAGGGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAGG
TGCACCCGGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCC
GGCGAGTCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCAGGGAGATCCAGACCTCCGTTCGCCTGGT
CCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCTGAGGGCACCAAGGCTGTCACCAAGTTCACCTCCTCTTAGACTGACG
CTGCGTCGCTTGTTATGACAGATGTAGTTGGCTGCTGTTTTCTTCTGTTAGTGGTCGCTGACTCTGCTTATG----TATC
TCCGACTAGTGGTAGGAATGGTCCTCTCTGTGCTGGA---TGATTGCCAACGCTTCGTTGGCTCGTTGGTTG----TGAG
AACTGAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr5B_1515
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GTCGCTGTTGACTCTGCTTGTCT--CTATT
TGAAAGTAGTGGTAGCC---GTAGTGCGTGTGCTGAG---TGATTGCCAACGCTTTGTTGGCTGGTTGGATG----TAAG
AACTGAATGCGTTGCTTTTGCAAACTGATT--ATCTATCTAGAAAATGTTGCAGTTGTGGTACTAC--------------
--ATGATCTTACTAATGCTATC-TTTTTTTACTCTTGTAAAC-----------------CGA----------------GC
CCTTGCGTTGCGTCTGCAAGAAGTAGTGCTACTGCTTGTTCATAATGGCTGATTGCTTGTTGAATCTTGTTTTGCAAACT
GAGAA--GATTTAGAATGATGCATTTCCGCTACTAGTGATTTCT-TCAGTCCGACCTGAT---------TAGTAAGTGCT
TGTACTAATCTCTGCCATGTGTTTGTA-------ACAATGCAAGTTTGGCTTCCAGATGAGATCTGGCTTTCAGATTCTT
CTGAAACTGAACGCATCTATGTTTGGCCATTTGTACTA-C--ATCTTTCTAAACCGAACACTACCATGTTTGGCAAACTG
ATGATACGTGTATCTTTGTTGAACTCTGGTTATCTGCAAGTAGTAGTGCTCTTCCTGGATTGGAGTGGAAATTGCTGCAT
GGTGCTGCAACTTGCGCAAACTGATGATATGGGATTAAG-AATAATGATGCATTTCTATTGTTAGCGATTTCTTC-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr2A_1515
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GTCGCTATTGACTCTGCTTGTCT--CTATA
TGAAAGTAGTGGTAGCC---GTAGTGCATGTGTTGAG---TGATTGCCAATGCTTTGTTGGCTGGTTGGATG----TAAG
AACTGAACGCGTTGCTTTTGCAAACTGATT--ATCTATCTAGAAAATGTTGCAGTTGTGGTACTAC--------------
--ATGATCTTACTAATGCTGTG--TTTTTTACTCTTGTAAAC-----------------CGA----------------GC
CCTTGCGTTGCGTCTGCAAGAAGTAGTGCTACTGCTTGTTCATAATGGTTGATTGCTTGTTGAATCTTGTTTTGCAAACT
GAGAA--GATTTAGAATGATGCATTTCCGCTGCTAGTGATTTCT-TCAGTCCGACCTGAT---------TAGTAAGTGCT
TGTACTAATCTCTGCCATGTGTTTGTA-------ACAATGCAAGTTTGGCTTCCAGATGAGATCTGGCTTTCAGATTCTT
CTGAAACTGAACGCATCTGTGTCTGGCCATTTGTACTG-C--ATCTTTCTGAACCGAACACTACCATGTTTGGCAAACTG
ATGATACGTGTATCTTTGTTGAACTCTGGTTATCTGCAAGTAGTAGTGCTCTTCCTGGATTGGAGTGGAAATTGCTACAT
GGTGCTGCAACTTGCGCAAACTGATGATATGGGATTAAG-AATAATGATGCATTTCTGTTGTTAGCGATTTCTTCTGTGA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr7A_1515
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GTCGCTGTTGACTCTGCTTGTCT--CTATC
TGAAAGTAGTGGTAGTC---GTAGTGCGTGTGCTGAG---TGATTGCCAACGCTTTGTTGGCTGGTTGGATG----TAAG
AACTGAACGTGTTGCTTTTGCAAATTGATT--ATCTATCTAGAAAACGTTGCAGTTGTGGTACTAC--------------
--ATGATCTTACTAATGTTGTCTTTCTTTTACTCTTGTAAAC-----------------TGA----------------GC
CCTTGTGTTGTGTCTGCAAGAAGTAGTGCTACTACTTGTTCATAATGGTTGATTGCTTGCTGAATCTTGTTTTGCAAACT
GAGAA--GATTTAGAATGATGCATTTCCTCTGCTAGTGATTTCT-TCAGTCCAACCTGAT---------TAGTAAGTGTT
TGTACTAATCTCTGCCATGTGTTTCTA-------ACAATGCAAGTTTGGCTTCCAGATGAGATCTGGCTTTCAGGTTCTT
CTGAAACTGAACGCATCTATGTTTGGCCATTTGTACTG-C--ATCTTTCTGAACCGAACACTGCCATGTTTGGAAAACTG
ATGATACGTGTATCTTTGTTGAACTCTGGTTATCTGCAAGTAGTAGTGCTCTTCCTGGATTGGAGTGGAAATTGCTACAT
GGTGCTGCATCTTGCGCAAACTGATGATATGGGATTAAG-AATAATGATGCATTTCTGTTGTTAGCGATTTCTTCTGTGA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>SNPs
-SSSSSSSSSSSS----------------S-SSSSSSS------------------------------------------
----S-------------------------S------S-----------------------------S------------
----------------------------SSS---------------------SSSS------S---------S-----S-
--------------SSS------------S------S----------------------SS-------------------
--------S-S---------------------------S--------S--------------------------------
--------------------------------------------------S-----------------------------
---------S-S---------------------------------------------------S----------------
--------------SS---------------------S---------------S--S-----------------S-----
-----------------------------S-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------S---------
---------------------SSSS----S--------------------------------------------------
------------------------------------------------S------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
----------------S-----S-S------------SSS----------------------------------------
-------------------------------------------------S------------------------------
-------S----------------S-----------S-------------------------------------------
----S-S------S----S------------S-------------SS---------------------------------
------------------S------------------S-----SS----------------------------------S
------------S-------------------------SS------S--S-------------S----------------
--------------------------------------------------------------------------------
-------------------------------------------S----------S-------------------------
--------------S------------------------S-----------------------S-S-----------SSS
SSS-SSS---SS--------------------------------------------------------------------
------------------S-------------------------------------------------------------
-S-----------------S---S---------------------S---------S--------S---------------
--------S-S-----------------------------------S----------------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_111
--------------------------------------------------------------------------------
-----------GTGGTTGAGCTCCGGAATGA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>reverse_1872
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------TTACTGGTTCGGAAGCGCTG-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
