>input_sequence_79429
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--------------------------------------ATGGCGCGAATGGCGGTCTCCGTGCTCTTCCTCATCGCCGGC
GTCGTGCTCATGCTCGCGCTGCACGTCCTCGTCATCGTCTGGGCGGTCCGGCGGGGCGCCGTGCTGCGGCTGCGCGGCGT
GGCGCGGGAGCGGGACCGGGAGCAGGGTGAAGCGGCGGGTCTGACGGCCGACGAGCTGGGCGAGCTGCCGTGCCAGGACT
TCAAGGCCGCCTCCGCGGACACGAC---CGCCGGCGAGTGTGCGGTGTGCCTGGAGGCGTTCCAGGGGGGCGACCGGTGC
CGCGTGCTGCCGGGGTGCCACCACGGGTTCCATGCGCAGTGCGTGGACTCGTGGCTGCGGCAGAGCCGCTGGTGCCCTGT
GTGCCGCGCCGAGGTGGCCTGCCGCGGCAAGGCGGCCGGT---GCGCTGGCCGATCAGGCCGCCACCTCGGAGACCGTCG
CTGAAAGACTGGGAGGTGCAGATCGCTAG---------------------------------------------------
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>chr6B_1_TraesCS6B01G321500
CTCTACTGGAAGATTTGCACATTCACACATTAATGATGGCGTCAAACCTCTACAATATCAAATAAACACAATATGAAACT
ATATTACATAACGAGTCTAAAGATATTTCTTTGGCCTTGTAAATGTTGATACTTTTTTCTATAAGTTTGATCAAACTAAA
GATACTTTGATTTCAGACAAAAGTTATATGCAAACTTAAAAAAACGAAGGGAGTATGATACTCAATCCTCTTTTGCTTCA
TTTAATTTTATGTCAACTCGTTAAAACTGCCTAGTTGGTATGCATACCTACGCTACTCCACGCCTTTACGGAGTATACTT
CATTTAACAGTGTTTTTTATACAAAATTTAATCAGA---TTTTCACACTGATGTGTAGTACATTTGGAGGATAATGCATT
TTACACCAGTTTCTACTCCATGTCTT---------------------------GCTACGTGCCCGGAAGACAAATCAAAC
CACCTTGTCATTCGTCAACGC-----------------------------------------------------------
------------------------------------------------------------------GTAGCTGTAGCCGA
AGTTCCAGATCGCGACAA--TGGCAAGTTTATTCAGAACCTGGAGCTGGAAGCCACGCCACGCACTCACATGAACCCAAC
-AAGGGAACGGAAGGGAAACGATTAAACGAGCGTAGCTCGCACTCTCGCCAGTCCGGCATCCCACCGGCGGGTCGCTTTC
TTTCCAATAAACACCATTCACAACGTTGCTCTTGCAAACTGGTTAATCTAATCAGACGCTGCTTCCGCCCGGAAATGGAG
ACGATCTGATAAAGACATGTGGAGGAGCGTACACAACGGCACACGATGTCGCTTTTAAGGGCAGCGGTTTTGTCAAACTG
AGGAACATGATAAGGGTGCAAATATATGGAAGATTGATGGAGAGATGCAGTGTTGCAGTTGAGTGATTGACCTGTCTCCG
AGGAGCAGTGAGAACTGGTTCATTCTACTCGGCAACTTGCGTCTTGGGTCGTCTGCCCACTTGTGCGTAGCCCTTGCTTT
AAACTCTTCTCTCAGCGAAGATCAGTTTGCGCGTCTGCATGGCGCGAATGGCGGTCTCCGTGCTCTTCCTCATCGCCGGC
GTCGTGCTCATGCTCGCGCTGCACGTCCTCGTCATCGTCTGGGCGGTCCGGCGGGGCGCCGTGCTGCGGCTGCGCGGCGT
GGCGCGGGAGCGGGACCGGGAGCAGGGTGAAGCGGCGGGTCTGACGGCCGACGAGCTGGGCGAGCTGCCGTGCCAGGACT
TCAAGGCCGCCTCCGCGGACACGAC---CGCCGGCGAGTGTGCGGTGTGCCTGGAGGCGTTCCAGGGGGGCGACCGGTGC
CGCGTGCTGCCGGGGTGCCACCACGGGTTCCATGCGCAGTGCGTGGACTCGTGGCTGCGGCAGAGCCGCTGGTGCCCTGT
GTGCCGCGCCGAGGTGGCCTGCCGCGGCAAGGCGGCCGGT---GCGCTGGCCGATCAGGCCGCCACCTCGGAGACCGTCG
CTGAAAGACTGGGAGGTGCAGATCGCTAGCGGATTTTGTTTGACCGTGACTCGTGTGCCGTCGTTGATGAGCTTGTGA-T
TATTTTTTAGTACGATTAGCTTATGATTGTACATA-AAGTAATCCATCTAGCATTTGGAGTCGTCCTTTGTAATTTTTCT
GATTCCATTCATTCCGTACATTAATTTCTTGTTTGATACTCCCTTTGTATCGAAATATTTGTCTACGCAGGATTTCTCCG
ACCAGGTGAAAGCGAGGAAACATAACAAACTACCCCCAATTTGAAAATTTACTTGTAGTGGGGGATCGTTGTCTTCCTCC
ATCACTCCTCCCCTCCGCTACAGCTCTGACGTCCGTCCCCGCTGGCCGCAGCTCCCTCGCCAGCCGCCTTCCTCCTCTCC
AATTGAGAGCCCAAGGTATGTCCCTTTCGTACGCATCTCCCTTGCCATCCGCTACAGCCTCCAGCCGCCCACGACTCCTA
CCCATCGCACCGCCCGTGCTCCTCCCCGCATTGACAAGCAGCAGCAGCGCAAACCAACGCCCTCCTCCCGCCTCAGCCTT
CCCCCGACGTTTGTAACCTCCCCCGATATATTAAAGTTTGGCTAGCTGGCGCCCGTGGTCCCCCCCCCCCCTCCTTTGTG
TCCCCTGTTTGTTTTCGTTCTTCGTCGAGTTGATTTGCCTGCCGTATCTCTAACAAAGCCAGTTTGAATTGATCACATAA
ACTTGCTTGATCAACGGTCTGTGTTGGAGTACTCCATAGAAAGCTATGTTGATCAAGTTGTGTTGGAGTACATACTGGAA
TAGGTTCTGTTGTTGTGCTGCCCTGCACAAATCAGCAACGAAATCAGCACTATGAGGACCGTCATCACACTCATAAATCA
GCAAGGAGTACTTATTTGCTAGAGCAGAAAATTGACAAATCAGCAGATCAACAGTAGGTGAGCTACTCCATTTGCTACAA
GAAATTATGTGTACTCATGCTTGTAAATGTACTCTTGCAAAAAAAATACGTTGCTCTGCTCACCAGCTCAC
>chr6D_306
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-----------------------------------------------------------------TTACGGAGTCTACTT
CATTTCACAGTGGTTTTTACATTAAATTTAATTATATGTTTTTCACACTAATATGTACTACATTTGGAGGATAATGCATT
TTACACTAGTTTTTACTTTTTTTTGTGGCCTCATTAAGCCAACCATAGTTACCGCTACGTGTCCGAAAGACAAACCAAAC
CACCTTGTCATTTGTCTAACACGTACTCCTTTTATCCGAAAAAACTTGTCCCTCAAATGAATGTATCTAATATCTAACAT
TAAGTTAGTGTTAAATACATTCATTCGAGAGACAAGTTTAGGACAAGATTTTTTTGGAGGGAGGGGGTAGCTGCAGCCGA
AGTTCCAGATCGCGACCGTT--GCAAGTTTATTCAGAACCTGGAGCTGGAAGCCACGCCACGCAGTCACATGAACCCAAA
TAAGGGATC-GAAGAAAAACGATTAAACGAGCGTAGCTCGCACTCTCGCCAGTCCGGCATCCCACCGGCGCGTCCCTTTC
TTTCCGGTAAACACCATTCACAACGTTGCTCTTGCTAACCGGTTAATCTAATCAGACGCTGCTTCCGCCCCGCAATGGAG
ACGATCTGATAAAGACACATGGAGGAGCGTACACAACGGCACATGATGTCGCTTTTAAGGACAGCGGTTTTGTCAAACTG
AGGAACAAGATAAGCATGCAAATATATGGAAGATTGACGGAGAGATGCAGTATTGCAGTTGAGTGATTGACTTGTCTCCG
AGAAGCAGTGAGAACTGGTTCGTTCTACTTGGCAACTTGCGTCTTGGATCGTCTGCCTACTTGTGTACAGCCTTTGCTTT
AAACTCTACTCTCAGCGAAGATCAGTTTGCGCGTCTGCATGGCGCGGATGGCGGTCTCCGTGCTCTTCCTCATCGCCGGC
GTCGTGCTCATGCTCGCGCTGCACGTCCTCGTCATCGTCTGGGCGGTCCGGCGGGGCGCCGTGCTGCGGCTGCGCGGCGC
GGCGCGGGAGCGGGACCAGGAGCAGGCGGAAGCGGCGGGTCTGACGGCCGACGAGCTGGGCGAGCTGCCTTGCCAGGACT
TCAAGGCCGCCGCCGCCGTGGGGACCGGCGCCGGCGAGTGCGCGGTGTGCCTGGAGGCGTTCCAGGGGGGCGACCGGTGC
CGCGTTCTGCCGGGGTGCCACCATGGGTTCCATGCGCAGTGCGTGGACTCGTGGCTACGCCAGAGCCGCCGGTGCCCGGT
GTGCCGCGCCGAGGTGGCCTGCCGCGGCAAGGCGGCCGAC---GCGGTGGTTGATGAGACCGCCACCTCGGAGATCGTCG
CTGAAAGACTGGGAGGTGCAGATCGCTAGTGGATTTTGTTTGACCGAGACTCGTGTGCCGTCGTTGATTAGCTTGTGA-T
--TTTTTTAGTAAGATTAGCTTGTGATTGTACATACAAGTAATCCATCTAGCATTTGGAGTCGTCCTTTGTGATTTTTCT
GATTTCATTCATTCCATACATAGATTTCCTGTTTGATA------------------------------------------
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>chr6A_424
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-----------------------------------------------------GCTACGTGTCCGGAAGACAAACCAAAC
CACCTTGTCATTCGTCAACAC-----------------------------------------------------------
------------------------------------------------------------------GTAGCTGTACCCGA
AGTTCCAGATCGCGACCATGTGGCAAGCTTATTCAGAACCTGGAGTTGGAAGCCACGCCACGCACTGATATGAAACCAAC
-AAGGGATC-GAAGGAAAACGATTAAACGAGCGTAGCCCGCAGTCTCGCCAA---------------GCGCGTCCCTTTC
TTTCCAGTAAACACCATCCACAACGCTACTCTTGCAAAGCGGTTATTCTAATCAGACGCTGCTTCCGCCCGGCAATGGAG
ACGATATGATAAAGACACATGGAGGAGCGTACACAGCGGCACATGATGTCGCTTTTAAGGACAGCGGTTTTGTCAAACTG
AGGAACATGATAAGGGTGCCAAAATATGGAAGATTGACGGAGAGATGCAGTATTGCAGTTGAGTGATTGACCTTTCTCCG
AGGAGCAGTGAGGACTGGTTCGTTCTACTTGGCAACTTGCGTCTTGGATCATCTGCCCAGTTGTGTACAGCCTTTGCTTT
AAACTCTACTCTCAGCGAAGATCAGTTTGCGCGTCTGCATGGCGCGAATGGCGGTCTCCGTGCTCTTCCTCATCGCCGGC
GTCGTGCTCATGCTCGCGCTGCACGTCCTCGTCATCGTCTGGGCGGTCCGGCGGGGCGCCGTGCTGCGGCTGCGGGGTGC
GGCGCGGGAGCGGGACCAGGAGCAGGGGGAAGCGACGGGTCTGACGGCCGACGAGCTGGGCGAGCTGCCGTGCCAGGACT
TCAAGGCCGCCGCCGCGGTCGGGACGGGCGCCGCCGAGTGCGCGGTGTGCCTGGAGGCGTTCCAGGGGGGCGACCGGTGC
CGCGTGCTGCCGGGGTGCCACCATGGGTTCCACGCGCAGTGCGTGGACTCGTGGCTGCGCCAGAGCCGCCGGTGCCCGGT
GTGCCGCGCCGAGGTGGCCTGCCGCGGCAAGGCGGCCGGCGCGGCGGTTGTCGATGAGGCCGCCACATCGGAGATCGTCG
CTGAAAGACTGGGAGGTGCAGATCGCTAGCGGATTTTGTTTGACCGAGACTCGTGTGCCGTCGTTGATTAGCTTGTGATT
--TTTTTTAGTACGATTAGCTTGTGATTGTACATA-AAGTAATCCATCTAGCATTTGGAGTCCTCCTTTGTAATTTTTCT
GATTTCATTCATTCCGTACATTAATTTCTTGTTTGAT-------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S-----
-----S------S------S-SS---------S-S--------------S--S----S----------------------
------S-----S----SSS-S-SS------------------------------------S------------S-----
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
-------S-S-----S------------------------------------------------------S---S-----
------S--------------------------------S--------------------------------S-------
-----------------SS------------------------S----------------S-------------------
-------------------------------------S-------------S----------------------------
---------------------S-------S-----------------S-----------------SSS----S-------
-------S------------------------------------------------------------------------
-------------------------------------------------------------------------------S
-----------------S---------S----------------------------------------------------
-----------S------S-SS------------------S---------------------------------------
-----------------------S-----------------------------------S---------S-------S--
---------------------------------------S------S---S----S------------------S-----
----------------------------------------------S---------------------S-----------
SS--------------------S---------------------------------------------------------
----S---------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_475
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-------------------------------------------------------TACGTGCCCGGAAGACAAAT-----
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>reverse_1834
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-------------------------------------------------------------------------TTCTCCG
ACCAGGTGAAAGC-------------------------------------------------------------------
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