>input_sequence_79403
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-----------------------------------------------AT-------------------------------
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---------------GGCCCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCCGCGGCGGAGA
AGGCCGAGAAGACCCCTGCCGGGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGAAGACCGCCTCCAAGGAG
GGCGGCGGCGAGAAGAGGGGCCGGAAGAAGGGCAAGAAGAGCGTGGAGACCTACAAGATCTACATCTTCAAGGTGCTGAA
GCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGC
TCGCCGGCGAGGCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCTGTCCGC
CTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr4A_1_TraesCS4A01G030400
TGTGATGTGTATGTGTGTAAAACTTCATAATGAAATACCTTGAGATGCGATCTGTGCAAAAAGAACAAATTCACGATCTT
TTGAGATGAATAGTATCATGTGTTGAAAAGCCATT--------TTTTTTGCACAACCGTCATTTCAACGTATTTCGTCCT
-GAAATTTACACACACATGTGTTATGCCTTCATGTATGTCCGTA--TTTTTCAGTATTTTTTGAAATTGGAAATATATGA
GTTTTGTTCAATTTTGAATTTTT-AGAAACCGGACTCCATGAAAGCCGAGCTCCATAAGCAATTTTCCGCAGCTGACTAT
ACTATTAACCATCTTCTAAGTATAAAGTTTATAAGGAGCGGGAGCTTTTAATATCCACCTCTCTCGCCTTCTTGTTCA--
-TGGCACTCCATTTCCTTTCAGTTTTAATAGTAACAATTTTCAATAATTAAATGGACAGCTATGTAGATTCTTCGTATTT
ACTTTTTATGGGGGAAGCTCAAGTTCATGGTGTCCCCACAGTTTTTTCAATTTTG-TGCCACAAACTCCTTTTGTCATTT
TAGATAAAATACTTTAAAAGTTATATTTAAA-AAAGTACTCAAATGCATAAAATTCAAATAAAAAATACATCTAAACAAC
ATG----------AGTATGCGTATATGGAAAAATATATCATCCGACCCATCCATTCTCCGAAATCCTATTCTGCCGTTCC
GATA-------------TC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CTTTGCTTGTCTTTTT---------
--CAAAACAAAACAAAAGAAATGCCGTACACGGTTTTTGCCACCACAGCCATAG--------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ACG------
--------------------------------------------------------------------------------
----------CACCGCAGCAAATCTGGATCGT---TGCAAGCAATATCGAACGAACGGTTCATACGATGCCATGTCACGG
ATCCGCGGCACCCACGAATCCACCAATCAGCGGTGACCTCTCTCCCACTATAA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--ACCCAGCACCGT-GCTCCGTCTTTCC------CCAATTCCATATCCGCCACCCACCTTCCCCTGCACAC--AACTCTC
CACCG------TAGCCCCCAATCCCCACCCATCTTCCCGGAGCAGCGAT-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GGCCCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCCGCGGCGGAGA
AGGCCGAGAAGACCCCTGCCGGGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGAAGACCGCCTCCAAGGAG
GGCGGCGGCGAGAAGAGGGGCCGGAAGAAGGGCAAGAAGAGCGTGGAGACCTACAAGATCTACATCTTCAAGGTGCTGAA
GCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGC
TCGCCGGCGAGGCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCTGTCCGC
CTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGAT
TCCGTTGCCTGTATCTAGTACCAGATGTGGTTGTTCACTCTGGTTATCGCCAAGTAGAAGTAGTGCTAGTGCTGGATGGG
AGTTGCTGAATGCTTACCGATGCTTCGTTCGCTGTAAGAACAGAATTATGAACCTTATGGTGCCGCTTTTGCAAGCTGAG
ATTTAGCAGCGTTGCTTATGATCTGACTGTTG-TT-------TGCT-TTTCTGCTCTTCTGAACCGAACTGTGCCACTGG
ACTGAACATCTGTATTGTTAATGGTAGGTTTCAGTTCTCTGAAACTTATTGGATTGGTTGCAACAATTCAGGTTATGAGT
TTATGAGTACCGCTGTGTTCATGTCAAGGTAATGATGAACAACACCAACGCCATGATTTTGCCTTGCTCGTGCTTTTGGT
TTGTAACGCTAGAAGTTAGCATTGATTTTCAATTAGTATCATCATCTAGCCAGCATGTTTGCAGCACCTTGTTGACACTA
TT------------------------------------------------------------------------------
--------------AAAATGTCAAGTTTGACAGTTGCTGTAATTTG------CAGCATCAGTATCATCCAGAAGTTGGTT
CCTATAAGCAAATTTGGTTATCTCTAGTACCCT-----TTTACCGAACATAAGTTACAATTCTGAATTTTATGGACTGTT
AGTGAATCCATTCAAGCAATGGTCTGCTACCTGTAGTTGTTGACCTGGCGTGCCGGTATCATGGACTAGTTCTAATTTTT
TATCTAGCGACTGTTCTGCTTGTAGGGTTTGGACTTCAAATGGAATGTGAAATATCCGCACAGAACTGAATAATTCAGAA
GTTTGTGACCTGAGACGGCAGTATTATGTACAGTTCTGCATCTGGGA-------------TAGCAGTAACGAACTAATCT
GTGCACCTCCATCATCACTTCAGAAGTACTGGCACGTCTGTTTAACCGCGGCAATTGTTATAGCCACATTAAAAGAAATT
GCGCAA--TTTTTTAATGATAATCGTGCTAAAATTTCATATCCATGATAGACAATTAAGTATGGGTAGCAAGATATGCAC
AGTTC
>chr7A_3
--TGATGTGTATATGTGTAAAATTTCAGAATGAAATACCTTGAGATGCGATCTGTGCAAAAAGAACAAATTCATGGACTT
TTGGGATGAATAGTATCATGTGTTGAAAAGCCAAAGATTTTTCTTTTTTGCACAGCCCTCATTTCAACATAATTCGTCCT
GGAAATTTACACACACGTGTGTTATGCCTCCATGTATGTCTGTATTTTTTTCAGGATTTTTTGCAATGTGAAAAATATAA
ATTTTGTTGAATTTTGAATTTTTCAGAAACCGGCTTTCATGGAGGCCGAGCTCCAAAAGTAATTTTCGATAACCTAG---
--------------------------------------------------------------------------------
--------------------------------------------------------CAACTATGTGACTTCAGT------
-------------------------------------------------ATTTTGTTT----------------------
--------------------TTGTATATAAA-TTAGTAAACGTATGATCCAACTTCAAATATACCTGCAAGGTTGTAGTA
AGTCTGTATCCGCAGGATAAATGCATGGCATAACAAATTAACAATTCTGTGGTTTGATCACCTATGTTTACTAATTTTAG
GACCAAATAAGAGATAGTC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------TTATTTTTGGCTTTGA---------
--AAAAACAAAAGGC-----------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------GCCCCTGCAATGACAGAATACTATTTGATTTCAAAAAAAT-----------------------------
---------------------------------------------------------------------------CTGAA
AAAATTGCACAAGTACACAAGGATATGATGTGTATATGTGTAAAATTTCAGAATGAAATACCTTGA--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GATGCGATCTGTGCAAAAAGAACAAATTCATGGACTTTTGGGATGAA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TAGTATCATGTGTTGAAAAGCCAAAGATTTTTCTTTTTTGCACAGCC
CTCATTTCAACATATTTCGTCCTGGAAATTTACACACACGTGTGTTATGCCTCCATGTATGTCTGTATTTTTTTCAGGAT
TTTTTGCAATGTGAAAAATATAAATTTTGTTG------------------------------------------------
---------------------------------------------------------AATTTTGAATTTTTCAGAAACCG
GCTTTCATGGAGGCCGAGCTC-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------CAAAAGTAATT
TT------------------------------------------------------------------------------
-----
>chr4D_340
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------TAAGGAGCGGGAGCTTTTAATATCCACCTCTCCCGCCTTCTTCTTCTTC
GTGGCACCCCTTTTCCTTTCAATTTTAATAGTAACAATTTTCATCAATTAAATGAACAACTATGTAGATTATTCGTATTT
ACTTTTTATGGGGGAAGCTCAAGTTCATGGTGTTCCCACAACTTTTTCAATCTTGCTGCCACAAAGTCCTATCGCCATTG
TAGAGAAAATACTTTAAAAATTGTATTTAAACACAGTACTCGCATGCGTAAAATTCAAATAAAAAATACACCTAAACAAC
ATG----------AGTATGAGTATATGGAAAAATATATCATCTGCGGCATCCATTCTCCGAAATCAAATCTTGTCGTTCC
GATA-------------TCTTTGGACGATGATAACTGCCACACATGTGGGCGTTAAGGGGTCTGCCCACATGTTTTGTGT
GGTGTCTAAGAGGACCAATCCACACGCCTATGTGTTGGCAAAACAACTAGCGCCCACATGCCTCTTTTTTTCTTTGCGGT
CCCTCTCACACGCCTACGTGTGGGCAAAATGCATAACGCCCACACGACCTCTCTCAGCCACCTACCTCACGGCCCCGCAC
GCCCCGCGTGACAATCACCACGCGTCCCCGCAGTTGCCATGGTCCGGACCCTCTTCAATGTCCGTTTACCTGCAGTTGAC
ATGTCGCTGAACTACAGTTGTCAAGTCGGACAACTACAGTTGTTATGGTTGCTCAACTGCAGTTGTCATCTCAGGTCAAG
TGCCAGATGCCATTTTGGACAATTGCAGTTGTTGCCATGTATGGTCTGATTTACTATAGTTGCCATGATTTGAAAACTTT
AGAGGTTGCCACCTGCTAACACTAAGCAGTTGCCATGTATGGTCTAGTTGACTACAGTTGCCATGATTTGAAAACCTTAG
AAGTTGCCACCTACTAACACCAGGTAGTTGCCGTGTAGCGCTACAAAGAGACATGGCAAAACAACATGTTTGGGTAAAAG
AGAGAGTTGCCATCTGCTTACAAGAACACTAGGACAGTTGCCGTGTACCCTGCAAAACACATGACAACTGACATGTTTGG
GTAAAAAAAGAGAGAGTTGACATCTGCTTACAAGCACACTAGGGCAGTTGCGATATATACTTCAGAACGCATGGCAACTG
GCAGCTTGGGTGTGGGAGAGGAGACGGATGTGTGGGCGAGATGACAAATGCCCACACACCAGCCCTTGTGCGTGAGTGAA
AACTGGCGTGTGGGCGAACTGCTAAACGCCCACACACCGACCCGCCGTGTGGTAAAACGGACGTGTGGGCGACCAGGTGA
ATGCCCACACATCAACCCAGTCTTACGTGGCACCACAAACATGCCAAGATTCGTGCACCCATAAACGGACGCGGATTCAC
GCGTGTCGACAAGATGCAAACGCCCACACATGTGGGCGTTAGTGTTTCCGATATCTTTTGCTTGTCTTTTT---------
--GAAAACAAAACAAAACAAATGCCGTCCACGTTTTTTGCCACCACAGCTATATACGCACACCCCTA-------------
--------------------------------------------------------------------------------
--------------------------------------------AAAAAGAAGATATAACAAAAAAAAAAAACG------
--------------------------------------------------------------------------------
----------CACCGCAGCAAATCTGGATCGT---TGCAAGCAACAT----CGAACGGTTCATACGACGCCATGTCACGG
ATCCGCGGCACCCACGAATCCACCAATCAGCGCT-ACCTCCCTCTCACTATAA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--ACCTAGCACCGT-GCTCCTTCTTTCC------CCAATTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGGCCCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCGGCGACGGAGA
AGGCCGAGAAGGCCCCGGCCGGGAAGAAGCCCAAGGCGGAGAAGCGGCTGCCGGCGGGCAAGAAAACCGCCTCCAAGGAG
GGCGGCGGCGAGAAGAGGGGCCGGAAGAAGGGCAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTGCTGAA
GCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGC
TCGCCGGCGAGGCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGC
CTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGAT
TCCATTGCCTGTATCC-AATAGC--------TGTTCGCCCTGGTTATCGCCAAGTAGAAGTAGTGCTAGTGCTGGATCGG
AGTTGCTGAATGCTTGCCGATGCCTCGTTCGCTGTAAGAACAGAATTATGAACCT-ATGGTGCCGCTTTTGCAAGCTGAG
ATTTAGTAACGTCGCTTATGATCTGACTGTTG-TT-------TGCT-CTTCTG--------AACTGAACTGTGCCACGGG
ACTGAACATTTGTATTGTTAGTGTCAGGTTTCAGTTCTCTGAGACTTATTGGATTGGTTGCAACGCATCAGGTTATGAGT
CTATGAGTGACGCTGTGTTCATGTCAAGGTAATGATGAACAACATCAACTCCATGATTTTGCCTTGCTCGTGCTTTTGGG
TTGTAACTCTAGAAGTTAGCATTGCTTTTCAATTAGTATCATC---TAGCCAGCCTGTTTGCAGCACCTTGTTCACACTA
TT------------------------------------------------------------------------------
--------------AAAACGTCAAGTTTGACAATTGCTGTAATTTG------CAGTATCAGTATCATCTAGAAGTTGGTT
CCTATAAGCAAATTTGGTTATCTGGAGTACTCTTGCTGTTTATCGAACATAAGTTACAATTCTGAATTTTATGGACTGTT
AGTGAATCTATTCAAGCAATGGTCTGCTGCCTGTAGTTGTTGACTTGGTGTGCCAGTATCATGGACTAG---TAACTTTT
TATCTACCGACTGTTGTGCTTGTAGGGTTTGGACTTCAAATGGAATGTGAA-TATCCGCACTGAACTGAAGAATTCAGAA
CTTTGTGACTTGAGACGACAGTATTATGTATAGTTTTGCATTTGGGATACTGTTAGTGAGTAGCAGTAACGAACTAATCT
GTGCACCTCCATCATCACTTCAGAAGTACTGGCACGCATGTTTAACCGTGGCAATTGTTATAGTCACATCAAAAGAAAAT
TGAGCATGTTTTTTAATGATAATCGTGCTAAAATTTCATATCCGTGATC-ACAATTAAGTATGGGTAGCAAGATATGCAC
AGTTC
>chr4B_465
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
ACTTTTTATG-GGGAAGCTCAAGTTCATGGTGTTCCCACAATTTTTTCAATTTTGTTGCCACAAACTCCTATTGCCATTT
TATAGAAAATACTTTA--AAATGTATTTAAA-ACAGTACTCACATGCATAAAATTCAAATAAAAAATACATCTAAACAAC
ATG----------------AGTATATGGGAAAATATATCATC-GCGCCATCCATTCTCCGAAATCAAATTCTGCCGTTCC
AATG-------------TC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------CCTTGCTTGTCTTTTC---------
--CAAAACAAAACAAAA--AATACCGTACACGGTTTTTGCCACCACAGCTATAG--------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ACG------
--------------------------------------------------------------------------------
----------CACCGCAGCAAATCTGGATCGT---TGCAAGCAATATCGAACGAACGGTTCATACGATGCCATGTCACGG
ATCCACGGCACCCACAATTCCACCAGTCAGCGCTGACCTCTCTCCCACTATAAGGCTGGTCACAATGGGCAAGAACATAG
TCTAGTAACTTACACACTTCCCTAGACTATGTTACTATCTCCACAGTGGGTAGGAACATCTATGTAGTGTCATGCAACAA
TGTATTTATTAGGTTATAGACTCATTGTTTCTTGGAGTGTGTGATGTTCCGGTAACTTAGCTAGTTACCACAAACACCTC
TCTCTTCATTAAATATGTGACACATAAGCAAAGTTGTATTGGAGTGTGTGATGTTACTCCTAAGTTCCTCCCCATTGTGA
CCAGTCACAATGGGGAGGAACTTAGGAGTAACATCACACACTCCAATACAGGTCACAATGGGAAGGAACTTAGGAGTAAC
ATCACACACTCCAATACAACTTTGCTTATGTGTCACATATTTAATGAAGAGAGAGGTGTTTGTGGTAACTAGCTAAGTTA
CCGGAACATCACACACTCCAAGAAACAATGAGTCTATAACCTAATAAATACATTGTTGCATGACACTACATAGATGTTCC
TACCCACTGTGGAGATAGTAACATAGTCTAGGGAAGTGTGTAAGTTACTAGACTATGTTCTTGCCCATTGTGACCAGCCT
AAACCTAGCACCGT-GCTCCTTCTTTCCTCAACTCCAATTCCAAATCCCCCACACACCTTCCCGTGCGCACGCAACTCTC
CACCG------CAGCACCCAATCCCCACCCGTCTTTCCGGAGCAGCGAT-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GGCCCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCCGCGACGGAGA
AGGCCGAAAAGGCCCCGGCCGGAAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCTGGCAAGAAGACCGCCTCCAAGGAG
GGCGGCGGCGAGAAGAGGGGCCGGAAGAAGGGCAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTGCTGAA
GCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGC
TTGCCGGCGAGGCCGCTAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATTCAGACCTCCGTCCGC
CTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGAT
TCCATTGCCTGTATCC-AATAGC--------TGTTCGCCCTGGTTATCGCCAAGTAGAAGCAGTGCTAGTGCTGGATGGG
AGTTGCTGAATGCTTGCCGATGCTTCGTTTGCTGTAAGAAAAGAATTATGAATCT-ATGGTGCCTCTTTTGCAAGCTGAG
ATTTAGTAACGTCGCTTATGATCTGACTGTTGTTTGCTTTTCTGCT-CTTCTG--------AACCGAATTGTGCCACGGG
ACTGAACACTTGTATTGTTAATGTTAGGTTTCAGTTCCTTGAAACTTTTTGGATTGGTTGC-------------ATGAGT
TTATGAGTACCGCTGTGTTCATGTCAAGATAATGATGAGCAACATCAACGCCATGATTTTGCCTTGCTCCTGCTTTTGGT
TTGTAACTCTAGAAGTTAGCATTGCTTTTCAATTAGT---------------------TTGCAGCACCTTGTTGACACTA
TT------------------------------------------------------------------------------
--------------AAATTTTCAAGTTTGACAATTGCTGTAATTTGTATTTGCAGCATCAGTATCATCTAGTAGTTGGTT
--------------------------------------------------------------------------------
-----------------AATAGTCTGCTGCCTGTAGTTGTTGACTTGGTGTGTCAGTATCATGGACTAG---TAATTTTT
TATCTACCGACTGTTGTGCTTGTAGGGTTTGGACTTCAAATGGAATGTGAAATATCCGCACTGAACTGAAGAAGTCAGAA
CTTTGTGACTTGAGACGACAGTATTATGTCAG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr4A_487
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------AGTTCATGGTGTCCCCACGGTTTCTTCAATTTTG-TGCCACAAACTCCTTTTGTCATTT
TAGATAAAATACTTAAAAAAATATATTTAAAAACAGTACTCACATGCATAAAATTCAAATAAAAAATACATCTAAATAAC
ATG----------AGTATGCGTATATGGAAAAATATATCATCCGACCCATCCATTCTCCGAAATCCTATTCTGCCGTTCC
GATA-------------TC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CTTTACTTGTCTTTTTTCAAAACAA
AACAAAACAAAACAAAA--AATGCCGTATATGTTTTTCCCCACCACAGCTATATACGCAAACCCCTGAGGCTAGTCATAG
TGAGGGTAACTTAGATAAAACTTAACACATCTCAAAACAATTTTGTTTATGTGGCAAGTATTTAATAAGGAGAGAGGTGC
TTGAAGTAACATAATATGTTACTGTCACATAGCGCTTCCCGAGTAAAATGAGTCTATAAGACAATAAATGAAACAAACTA
TAACACTACTACTAAGATACTTTGTACTATGAGGGTATGACACTAGTCTAAGTTTCCCCACTATGACCAGCCTAAAAAAA
GCTATATACCCACCGCAGCAAATCTGGATCGT---TGCAAGCAATATCGAACGAACGGTTCATACGATGCCATGTCACGG
ATCCGCGGTACCCACGAATCCACCAATCAGCGGTGACCTCTCTCCCACTATAA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--ACCCAGCACCGT-GCTCCGTCTTTCC------CCAATTCCATATCCGCCACCCACCTTCCCCTGCACAC--AACTCTC
CACCG------TAGCCCCCAATCCCCACCCATCTTCCCGGAGCAGCGAT-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GGCCCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCCGCGGCGGAGA
AGGCCGAGAAGACCCCTGCCGGGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGAAGACCGCCTCCAAGGAG
GGCGGCGGCGAGAAGAGGGGCCGGAAGAAGGGCAAGAAGAGCGTGGAGACCTACAAGATCTACATCTTCAAGGTGCTGAA
GCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGC
TCGCCGGCGAGGCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGC
CTCGTCCTCCCTGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCAGTCACCAAGTTCACCTCCTCTTAGAT
TCCATTGCCTGTATCTAAATAGC--------TGTTCGCCCTGGTTATCACCAAGTAGAAGTAGTGCTAGTGCTTGATGGG
AGTTGCTGAATGTTTGCCGATGCTTCGTTCGCTGTAAGAACAGAATTATGAATCT-ATGGTGCCGCTTTTGCAAGCTGAG
ATTTAGTAACGTCGCTTATGATCTGACTGCTG-TTGCTTTTCTGTTCCTTCTG--------AACCGAACTGTGCCACGGG
ACTGAACATTGGTTTTGTTAGTGTTAGGCTTCAGTTCTCTGAAACTTATTGGGTTGGTTGCACCACTTCAGGTTATGAGT
TTATGAGTACCGCTGTGTTCATGTCAAGGTAATGATGAGCAACACCAACGCCATGATTTTGCCTTGCTCGTGCTTTTGGT
TTGTAATGCTAGAAGTTAGCATTGCTTTTCAATTAGTATCATCATCTAGCCAGCATGTTTGCAGCACCTTGTTGACACTA
TT------------------------------------------------------------------------------
--------------AAAATGTCAAGTTTGACAATTGCTGTAATTTG------CAGCATCGGTATCATCTAGAAGTTGGTT
CCTATAAGCAAATTTGGTTA-CTGGAGTACTCTTGCTGTTTATCGAACATAAGTTACAACTCTGAATTTTATAGACTGTT
AGTGAATCTATTCAAGCAATGGTCTGCTGCCTGTAGTTGTTGACTTGGTGAGCCAGTATCATGGACTGG---TAATTTTT
TATCTACCGACTGTTGTGCTTGTAGGGTTTGGACTTCAAATGGAATGTGAAATATCCGCACTGAGCTGAAGAATTCAGAA
CTTTGTGACTTGAGACGACAGTATTTTGTACAGTTTTGCATTTGGGA-------------TAGCAGTAACGAACTAATCT
GTGTACCTCCATCATCACTTCAGAAGTACTGGCACACCTG-TTAACCGTGGCAAGTTTTATAGCCACAACAAAAGAAATT
GAGCGTGTTTTTTTTATGATAATGGTGCTAAAATTTCATATCCATGACC-ACAA--AAGTATGGGTAGCAAGATATGCAC
AGTTC
>chr1B_767
GACCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CAGCAGCAAATCAGGATCGTCCATGGAAACAGCAT----CGGACGCTTCATACCTTCCCACGTCACGG
ATCCGAGCCACCGAACCCTCCACCAATCAGCGCCCACACCTCTCCCTGTATAA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--ACCCATCAGCCCCGCTCCTTCTTCCCGCACATCTCGTTCCAAATCTCCCAAT--CTTTCCCGCACAAAC--AAGCCTG
CACAT------TCCCCCCTCCCT--------------CGGAGCAGCGAT-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GGCGCCCAAGGCGGAGAAGAAGCCGGCGGGGAAGAAGCCCGCGGAGGAGGAGCCCGCGACGGAGA
AGGCCGAGAAGGCCCCCGCCGGGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGC---AAGACCGCCTCCAAGGAG
GGCGGCGGCGAGAAGAGGGGCCGGAAGAAGGGCAAGAAGAGCGTGGAGACCTACAAGATCTACATCTTCAAGGTGCTCAA
GCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGC
TCGCCGGGGAGGCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGC
CTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGAT
TCAGT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr1A_767
GACCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CCGCAGCAAATCAGGATCGTCCGTGGAAACAGCAT----CGAACGCTTCATACCGTTCCACGTCACGG
ATCCGAGCCACCAACCCCTCCACCAATCAGCGCCCACACCTCTCCCTGTATAA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--ACCCATCAGCCCCGCTCCTTCTTCCCGCACATCTCGTTCCAAATCTCCCAAT--CTTTCCCGCACAAAC--AGACCAG
CGCCCCTTCCCTCCCCCCTCCCT--------------CGAAGCAGCGAT-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GGCGCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCCGCGACGGAGA
AGGCCGAGAAGCCCCCCGCCGCGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCCGCGGGC---AAGACCGCCTCCAAGGAG
GGCGGCGGCGAGAAGAGGGGCCGGAAGAAGGGCAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTGCTCAA
GCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGC
TCGCCGGGGAGGCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACGATCACCTCCCGCGAGATCCAGACCTCCGTCCGC
CTCGTCCTCCCCGGAGAGCTCGCCAAGCACGCCGTCTCTGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGAT
TCAGT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr2B_988
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TCCCGAAGCAGCGAT-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GGCCCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCCGCGGCGGAGA
AGGCCGAGAAGGCCCCGGCGGCGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCAGCCGGC---AAGACCGCCTCCAAGGAG
GGCGGCG---AGAAGAAGGGCAAGAAGAAGAGCAAGAAGAGCGTCGAGACCTACAAAATCTACATCTTCAAGGTGCTGAA
GCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGC
TCGCCGGGGAGGCCTCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGC
CTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCTGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGAT
TGCGTCGCCTGTATCTAGTAGCAAATG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr2D_988
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------TCCCGAAGCAGCGAT-------------------------------
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---------------GGCCCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGCAGAGGAGGAGCCCGCGGCGGAGA
AGGCCGAGAAGGCCCCGGCGGCGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGC---AAGACCGCCTCCAAGGAA
GGCGGCG---AGAAGAAGGGCAAGAAGAAGAGCAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTGCTCAA
GCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGC
TCGCCGGGGAGGCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGC
CTCGTCCTCCCCGGGGAACTCGCCAAGCACGCCGTCTCTGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGAC
TGCGTCGCCTGTATCTAGTAGCAAATGTAGTT------------------------------------------------
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>chr2A_988
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----------------------------------TCCCGAAGCAGCGAT-------------------------------
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---------------GGCCCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCTGCGGAGGAGGAGCCCGCGGCGGAGA
AGGCCGAGAAGGCCCCTGCTGGGAAGAAGCCGAGGGCCGAGAAGCGGGTTCCGGCGGGC---AAGACCGCCTCCAAGGAG
GGCGGCG---AGAAGAGGGGCAGGAAGAAGGGCAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTGCTGAA
GCAGGTGCACCCTGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGC
TCGCCGGGGAGGCTGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCAGGGAGATCCAGACCTCCGTACGC
CTCGTCCTCCCTGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTTACCTCCTCTTAGAT
CGCGTCGCCTGTATCTAGTAGCAAATGTAGTT------------------------------------------------
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-----
>SNPs
SS----------S---------S----S---------------------------------------------S-SS---
---S-----------------------------SS-------------------S--S----------S--S--------
----------------S------------S----------S-------------S--------S---SS----S----S-
S-------S------------------------SS-S----S-S-----------S---S-------SSS-S-SS-SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------S---------S---S--
-------S--S----------S---------------------SS---------S---S---------------------
--------------------------------------------------------------------------------
-------------------S-------------S--------S-------------------------------------
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-----------------S-------------------------------S------------------------------
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-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------S--S----S-------S-S-----------------------------------------
---------------S----------------------------------------------------------------
------S-S---S----------------------------------S-----SSSSSSSS----------------S--
---------S-------------S-----------------------------------------S--------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------S-----------
-----------------------SS-----S-----------S-------------------------------------
--------S-------------------S---------------S---S-----S--------------SSS--------
------S--------S---------------------------------------------S--------S---------
S--------S-------S-----------------S-----S--------------------------------------
------------------------------------S-----------S--------------------S----------
-S--S-------------------------------------------SS------------------------------
-----
>forward_394
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------------------------------------------------------CCACCTCTCTCGCCTTCTTG------
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-----
>reverse_3977
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--------------------------------------------------------TTCTGAACCGAACTGTGCCA----
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-----
