>input_sequence_79395
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----------------------------------------------------------ATGGCAACTCTGGGCGCAGCAA
CAGCGTGCGTCCCGGCCTCCGGCGTCAGGTGCATCCCGACGTTTGCTGCCGCGCCGGCGCCGATCAGGACCGCCCCACGT
CCCACCGCCT-CTCTGAAGCGACCCACGACGGGTGGCGTGAGGCTGTCGGCGAGGTTCAGGACGGCGGCCGCGACGCACA
AGGTGAAGCTCGTCGGGCCCGACGGCGAGGAGACGGAGCTGGAGGTGGCGGAGGACGCCTACATCCTGGACGCGGCGGAG
GAGGCCGGCGTGGAGCTGCCCTACTCGTGCCGGGCCGGGTCGTGCTCGACGTGCGCGGGGAAGCTGGCGTCCGGCGAGGT
GGACCAGTCGGACGGATCGTTCCTCGACGACGCGCAGATGGCCGAGGGGTACGTGCTCACCTGCGTCGCCTACCCCCGGG
CGGACTGCGTCATCTACACCCACAAGGAAGAGGAGGTGCATTAG------------------------------------
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>chr3B_1_TraesCS3B01G406100
ACACTCAGTCTTCAAACTTACATGAATGATTTTTT-AAATGGATGAATACCACTTAAATTATGAAACAAATTGAAATGCA
CAAACACATTTTAATTTACATAATTTTTTTTAGAAAAAAGGCTTGAGCACTTCTCAAAATACATAAATTTTTTTCTGATA
ATGTGCAAATATTTAATAAATTCAATTATGATTCAAAAATTTGTGAACGCTTATTTAAGTTTCTTGGACGTGTTTCAAAA
ATTCCAGTGGAGTTTCTATTTGCATGAAGATTTTAAAATTGATGTGACAGTTTTCTTTACATAAATATTTATTAAGATAC
ATGAACAGTTTTTG--TTAACTTACATGAAAAATATTAGGATATTTTACCCAAAATACATTACTCCCTCCGACCCATATT
AATTGTCGCTGATTTAGCACAAAGTTGTACTAAATCATCGACAATTGATATTGATCGGAGGGAGTAATAATTTTTCCTAG
ACTTACATGAAAAATATTAACATATGTTTACCTACAGTACACTAATATGTGTGAACATAGAAAAATGAACAAAATGTGAT
ATAAAAGAGAACTGAAGAAAAGAAACAGCACTACTTCTTGGGGCCAGCCCAACTTAGGAGGGCGCGTGGGCGAGGCCGCG
TTATAATGTAGACGCACTCCTCTGTCCCACGGAGAGCACGCGAAGCATTGTTTGCTGTCTACACCTGCACGACAGCTCGA
CACCTGTACGGCTGTACCCCTCTGGGATCTGCTTCT----TTCTCTCGATGAAGTAGGATATGTTCTGATGCTTCTACAT
TGCACTAGCACCTTCGTGTCGTCACTCGTCACCA---ATGGCCATTTCCCAAGGACACCAGCCACTAACGCTCCTGGCGA
GGCTGCTACTGGTGCCGCTCAACATCCCACGCCCGTCTATTAATACCGCGCGCGTGCGTGTGCCCTGCCGTTCTCAAGTT
GTGATCGCACGGTA----GTA--CTCGCAAGCGAAGTTCTGC--TTTCTTTTTGAACCATGGCAACTCTGGGCGCAGCAA
CAGCGTGCGTCCCGGCCTCCGGCGTCAGGTGCATCCCGACGTTTGCTGCCGCGCCGGCGCCGATCAGGACCGCCCCACGT
CCCACCGCCT-CTCTGAAGCGACCCACGACGGGTGGCGTGAGGCTGTCGGCGAGGTTCAGGACGGCGGCCGCGACGCACA
AGGTGAAGCTCGTCGGGCCCGACGGCGAGGAGACGGAGCTGGAGGTGGCGGAGGACGCCTACATCCTGGACGCGGCGGAG
GAGGCCGGCGTGGAGCTGCCCTACTCGTGCCGGGCCGGGTCGTGCTCGACGTGCGCGGGGAAGCTGGCGTCCGGCGAGGT
GGACCAGTCGGACGGATCGTTCCTCGACGACGCGCAGATGGCCGAGGGGTACGTGCTCACCTGCGTCGCCTACCCCCGGG
CGGACTGCGTCATCTACACCCACAAGGAAGAGGAGGTGCATTAGCTTATAGCTAGACCAAATCGTGCCAGAGTTTTCGTG
TCGTGTCCGACGGTTTGGTGTCTTGCACATGTAGGGTGCTGTGTAGTGGAGTAGT-------------------------
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--------------------------------------------------------------------ATCGTTTCGAAC
GCTGTATGATTTGTTTGCTCAAAGTGAATAGCATATCGTCAGTTTTGCTAGCTTTTCAACAACTAC-AAGATAAATACAA
TAGATTTCACTAA---GACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGTCCGAAAGGGCGTGGGTTCA
AATCCCACAGCTGTCATATTTTTTGGATGTTTGCCTGGATAATACCCTGACGAGCTCGGCTATGGGTCACCTCCTGCTTT
TATTACCTCTGCGCTCAACAGCCAACACTTCCCTCATCTTTTTCGGATCATGTCATCGCGAAACCACTCTCATCCCTTCT
CAGCAATGTCCAAAAAAAAAT-----------------------------------------------------------
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-----------CATGAAAGCACCATGTTATCTTCAAAACAATCTTGAGCAACAACTATG-TATTTCCAAACAAATTGTTT
AGGACAACAATACAATTGATTATGTTTCT-AGTC---------------------------------AAATTTCCCAAGG
TACACTTGTATGTTTTCTTCAAA---------------------------------------------------------
------------------TATTCTTTACATCGACTAGTATTTTCTCTCTGAAAA--ATATACTTGAGAAAAA-TAAAATA
ATTTTGAAGACAAATATCCAAATCGTATGTTTTCTACAAACATTATTTACAACAACATTGTTTCAGTAATGATCTCTAGA
AC-ATCAAACTAATTATGTAAATCAATAAAGCTAAATGTTATCTTCAAAATATTATTTACAACAACAATTGTGTTTTTT-
-TGTGAATGAGGACAATTATTATT-TTTCTAATAAATTGTTCAGAAAAACCATCCAATTTATTATGTACTGCATTTACAT
ACCCCAAGTTAAATTACCCAATGTTCTCTTGTACT-----TTTTCTTCAAAATGTTCTTTGCACCAAAATATTCTCAAAG
AAAAAACAT-AAATCAAAATATCCTCCTTCAGGCCATGTAGCGGTGACTGATAT
>chr3A_1
ACACTCAATTTTCAAACTTACATGAATGATTTTTTTAAATGGACGAATACCATTTAAATTATGAAAAAAATTGAAATGCA
CAAACACATTTTAGTTTATATATATATTTTT---AAAAAGGCTTGAACACTTTTCAAAATACATGAATATTTTTCTGATA
ATATGCAAATATTTGATACTT-----------------ATTTGTGAACGCTTATTTAAGTTTCTTGGACATGTTTCAAAA
ATTCCGGTGGAATTTCTATTTACATGAAAA----AAAATTGATGTGACAGTTTTCTTTACATAAATATTTATTAAGACAC
ATGAACATTTTTTTATTTAACTTGCATG-AAAATATTAGGATGTTTTACCCAAAATACACTAATCCCTCTGATCCATATT
AATTGTCGCTGATTTAGCACAAAGTTGTACTAAATGAGCGACGATGAATATAGATCGGAGGGAGTAATAATTTTTCCTAA
ACTTACATGAAGAATATTAACATAT-TTTACCTCGAGTACACTAATATGTATGAACACAGAAAAATGAACAAAATGTGAT
ATAAAAGAAAATGGAAGAAAAGAAACAGCACTACTTCTTGGGGCCAGCCCAATTGAGGAGGACGCGTGGGCGAGGCCGCG
CTATAATACAGAAGCACTCCTCTGTCCCGTGGAGAGAACACGCGAAGTATTCTTG---------CTGCACGACACGTCGT
CACCTGTACGGCGGCACCCCTCTGGGATCTTCTTCT----CTCTCTCGATGAAGCAGGATAGGTTCTGATCGTTCTACTT
TGCACTAGCACCTTCGTGTCGTCACTCGTCACCTTCGATGGCCATTTCCCAGGGAGACCAGCCACGTACGCTCCTGGCGA
AGTTGCTACTGGTGCGGCTCAACATCGCACGCACGCCTACTTATAC----CGCGCACGCGTGCTCTGCGATTCTCAAGTT
GTGATCGCCGACCGCACGGTACTCTCGCAAGCGAAGTTCTGT--TTTC-TTTTGAGCTATGGCAACTCTGGGCGCAGCAA
CAGCATGCGTCCCTACCTCCGGCGTCAGGTGCGTGCCAGCGTTTGCCGCCGCGCCGGAGCCGATCAGGACCGCCCCGCGT
CCCGCCGCCT-C-CCGAAGCGACCCGCGACGGGCGGCGCGAGGCTGTCGGCCAGGTTCAGGACGGCGGCGGCGGCGCACA
AGGTGAAGCTCGTCGGGCCCGATGGCGCGGAGACGGAGCTGGAGGTGGCGGAGGACGCCTACATCCTGGACGCGGCGGAG
GAGGCCGGCGTGGAGCTGCCCTACTCGTGCCGGGCCGGGTCGTGCTCGACGTGCGCGGGGAAGCTGGCGTCCGGCGAGGT
---------GGACGGGTCGTTCCTGGACGACGCGCAGATGGCCGAGGGCTACGTGCTCACCTGCGTCGCCTACCCCCGGG
CGGACTGCGTCATCTACACCCACAAGGAAGAGGAGGTGCATTAGATTA--GCTAGACCAATCCGTGCCAGAGTTTTCGTG
TTGTGTCCGACGG-TTCGTGTCTTGCAGATGTACGGTGCTGTGTAGTGTAGTGGAGTAGTATCTGATGGGCTAATAAGCT
ACGGCGACGAAGCCTGATGGGCTAATAAGCTACGGCGACCAAGCCGGGCACGTCGAGCGCGGGTATGGGCGCGCGCTGGA
CTTGCTGGGCGCGTCGGGTCCGAGGACTAGGGCGTGCGTGTGTGCGTGCGTTGGGTGCATGGGCGTGTCCGTGCACCGGG
TAGTGTGTGTGTCTGTTGGCGATCCGTGTGGGGCGATCGGGTCGCCTGGTTGATGCTCAACGCGAGACGCTGGCGCACGC
GCGTGCGTAGCGGGCGCGGCGAGAGCATGCAGGGCGTGGAGTAGATCGCGGGCGAGTGGAGGCGTGGGTGCGTGTCCAGT
GCGCTGGCTCGGGGATATAAAGCCACGGGGTGATCGTTGTAACAGTTGACACGGTCGAGTTCGTGCTTGAGGCAACAAGG
GGGCGAGTGAGCGCCGGAAAAACCTCCGTGTCCACCGTTTTCTGAATTTGTCTGAACTTCTTCTTCTTCTCTCCGGTGAG
CCAGCCACGGCAGCAGTGAGCGAGCAGAGTGCGAGGGAAAGGAGAGCTGCCGTGAGGAGTTGGCGGTTCCAACAATTGGT
ATCAGAGCCGCGTGGAGGAGGGAGCTCGCCGGCGATGTCCATCATGCTGTACGCCGGCGGATCGGGCAGCACGGTGGCGC
ATGCAGCGCCGATGCTCACGGGGGAGAACTACATCACCTGGGCCATCAAGGTGGAGGCCGACCTGGACGCCGCCGGACTA
TGGGAGGCGGTGGTGCCGCCGGAGGACGCCGCGTTGGCGGTGATCGCCAAGAAAGATAAGCCGGCGCGGGCTTACCTGCT
CTGGGCGCTCGCCGATGATTTGCTGCTGCAGGTGGCCGCAAAGAAGACCGCGGCGGAGATACGGAGCAGCCTCAAGGCCC
GGTTCGTCGGGACTGATCGCGTGCGGGCGGCGCGGCTGGGCACGTTGCGCAGGGAGTTCGAGCTCCTGCGCATGGCGAGC
GACGAGTCGCTGGACGCGTTCGCGGGGAAGATCAGCGGCATGGCGGCGCGCTACACCGGGCTGGGAGCGACCCTTGACGA
CGAAGCAATAGTGAGGAAGCTCCTGGACTGTGTCCCGGATCGTCTGTACGCGGCGGTCGCCGGGATGGAGCAGTTCTGCA
ACTTGTCGGAGCTTCTCTTCGAGGACGCGCTCGGGTGCCTGAAGGCGTTCGACGAGCGGCCGCGTCGGCGAGGATAGGCA
GGCGGCGAGCGGGCGGACGGTGAGCAGCTCATGCTCACCGCGGCACAGTGGCGGGCGCGCGAGCGGCACCGGGGCGGTGC
ACGCGGAGAGGACGACGACGACGGCGCGGCCAGCACAGCATCAGGCGGAGGGGACAACCGTCGCGGGAAGTGCTACAAGT
GCGGCGTCAGAGGACATTTCAAGAGGGAGTGCCTCCTGCTGCGGAAGGAGCCGGCCGCGGGGCGTGCGCTGATGGCGGAC
GCCGATGTCGAGGACGCCGTGCTGCTCTGAGCCGCGGCTTAGGGCGTGAATGATGGGCTAATAAGCCACGACGACGAAGC
CGGGCATGTCGAGCGCGGGTATGGGCGCGCGCTGGACTTCCTAGGCGCGTCGGGTCCGAGGACTAGGGCGTGCGTGTGTG
CGTGCGTTGGGTGCATGGGTGTGTCCGTGCATTGGGGTAGTGTGTGTGTGTGTCTGTTGGCGATCCGTCTGGGGCGATCA
AGTCGCCTGGTTGATGCTCAGCGCGAGACGCGGGCGCATGCGCATGCGTAGCGAGCGCGGTGAGAGCATGCAGGGCGTGG
AGTAGATCGCGGGCGAGTGGAGGCGTGGAGTAGATCGCGAGCGAGTGGAGGCGTGGGTGCGTGCCCAGTGCGCTGGCTCA
GGGATATAAAGCCACGGAGTGATCGTTGTAACAGTTGACACGGTCGAGTTCGTGCTCGAGGTAACAAGGGGGCGTTTGAG
CGCCGGAAAAACCTCTGTATCCATCGTTTTTTGAATTTGTCTGAACTTCTCCTTCTTCTCTCCGGTGAGCTAGCCACGGC
AGTAGTGAGCGAGCAAAGTGCGAGGGAGAGGAGAGCTGCCGCGAGGAGTTGTCGGTTCCAACAGTATCATCATTCCGAAC
GTTGTATGATCTGTTTGCTCAAAGTGAATAGCATATCTTCAGTTTTGCTAGCGTTTTGAACGACAGAAAGCTAAATAGAA
GATATTTCAACAA---GACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTATGGTCCGAAAGGGCGTGGGTTCA
AATCCCATAGCTGTCATATTTTTTGGATC------------------TGATGAGCTCCGCTTTTATTATTACCTCTGCGC
TCGACAGCCAACTCTCCCCTGCTCTTTTTCACATCATGTTCTCACGGAACCACCCTCATCCCTTCTCAGCAATGTCAAAA
AAAAGAAAATCGTTGAGGACGACAATACATTTGTTTTTGTATTGCATTCATATATCCATGCCAAAATTTCCAATGTACAG
TTGCATGTTTTCCTCAAAAATGTTGT--TACAACAACTAGTCTTTTTAATGTTCTCTTAAAAAACATTTTTTTCATGTCA
AATATCACAATCCTGTTATTTCTGTAAAATATTATTTACGTCAACAATAGTTAAAAAATAACCCTAGATCAATCAAAGTA
ATTGCAACAATCATGAAATCACCATGTTATCTTCAAAACAATCTTCAGCAACAACTTTG-T-TTTCCAAACAAATTGTTC
AGGGCAACAATCCAATTTAGGGTCTCTTTGATTCAAAGGATTTTCATTGAAGGATTAGAATCCTTAGAAATTTTTCAAGG
TACACTTGTATGTTTTCTTCAAAATAT-----------------------------------------------------
---------------------TCTTTATACCCACTGGTATTTCCTCTCCGAAAA--ATATACTTGAAAAAAAA-------
---TTCAAGACAAACATCCCAATCGTATGTCTTCTACAAATATTATTTACAACGACATTGTTTCAGTAATGATATGTAGA
ACAATCAAAGTAATGATGAAAATCAAGAAATCTAAATGATATCTTCAAAATATTATTTACAACAACAATTTTGTTTTTT-
-TGTGAACGAGGGCAATTAGTTTTCTTTCTAATAAATTGTTCAGAACAACAATCCAATTTATTATGTACTGCATTTACAT
ACCCCAAGTTAAATCACCCAATGTTCTCTTGTA-T-----TTTTCTTCAAAATGTTCTTTGCACCAAAATATTTTCAAAG
AACAAAACACAAATCAACATATCCTCCTTCACGCAACGTAGCGGTGAC------
>chr3D_478
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ACTTATATGAAAAGTATTGGCATAT-TTGACCCAAAACACACTAATATGTATG--CAGAGAAAAATGGACAAAATGTGAT
ATAAATGGAAAAGAAAGAAAAGTGTGGAAGCA--TTCTTGGGGCCAGCCCAGGTGAGGCGGGCGCGTGGGCGACGCTGCT
TTATATAGACCACCCCACATCG-----CACGGAGAGCACGCGAAGCAATC-TTGCTGTCTACACCAGCACGA--------
-----------CTGTACCCCTCTGGGATCTGCTTCTCTCTTTCTCTCGATGAAGCAGGATATGTTCTGATGCTTCTACTT
TGCACTAGCACCTTCGTGTCGTCACTCGTCACCTTCGATGGCCATTTCCCAAGGACACCAGCCACGTACGCTCCTGGCGA
GGTTGCTACTGGTGCAGCTCAACATCTCACGCACGCCTATTAATAC----CGCGCGCGTGTGCTCTGCGATTCTCAAGTT
GTGATCGCCGACCGCACGGTA--CTCACAAGCGAAGTTCTCTGCTTTC-TTTTGAGCTATGGCAGCTCTGGGCGCAGCAC
CAGCGTGCGTCCCTGCCTCCGGCGTCAGGTGCGTGCCGGCGTTTGCTGCCGCGCCGGCGCCGATCAGGACCGCCCCGCGT
CCCGCCGCCCCC-CTGAAGCGACCGACGACGGGCGGCGCGAGGCTGTCGGCGAGGTTCAGGACGGCGGCGGCGACGCACA
AGGTGAAGCTCGTCGGGCCCGACGGCGCGGAGACGGAGCTGGAGGTGGCGGAGGACGCCTACATCCTGGACGCGGCGGAG
GAGGCCGGCGTGGAGCTGCCCTACTCGTGCCGGGCCGGGTCGTGCTCGACGTGCGCGGGGAAGCTGGCGTCCGGCGAGGT
GGACCAGTCGGACGGGTCGTTCCTGGACGACGCGCAGATGGCCGACGGGTACGTGCTCACCTGCGTCGCCTACCCCCGGG
CGGACTGCGTCATCTACACCCACAAGGAAGAGGAGGTGCATTAGG-------TAGACCAAATCGTGGCAGAGCTTTCGTG
TCGTGTCCGAAAG-TTTGTGTCTTGCACATGCATGGTGCTGTGTAGTGGAGTAGT-------------------------
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--------------------------------------------------------------------ATCGTTCTGAAC
GCTGTGTAATTTGTTTGCTCAAAGTGAGTAGC--------------------TTTTCCGAAGTATC-AAGCTGAATACTT
CATCTTTAAACAAAAAGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGTCCGAAAGGGCGTGGGTTCA
AATCCCACAGCTGTCACATTTTTGGATGTTTTGCCTGGGAAATACCATGATGAGCTCTGCTTC---TATTACCTCTGCGC
TCAACAGCCAATACTCCCCTGCTCTTTTCCAGATCATGTTCTCACGAAACCACTCTCAT---------------------
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>chr3D_1901
AATATTCTTTACACCAACTAGTATTTTCTCTTCCAAACATATATACTTGAGAAAAAATAAAATAATTTTCAAGACAAATA
TCCCAATCGTATGTGCTCTACAAATATTCTTACAACAACATTGTTTCAGTAATGATCTGTAGAACAATCAAAGTAATGAT
GAAAATCAAGAAATCTAAATGCTATCTTCAAAATATTATTTACAACAACAATTGTGTTTTTTCGTGTGAGTGAGGACAAT
TAGCTTTCCTTCTAATAAATAGTTCAAATCCCACAGCTGTCA--------------------------------------
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----------------CATTTTTGGATGTTTTGCCTGGAAAATACCATGATGAGCTCTGCTTC---TATTACCTCTGCGC
TCAACAGCCAATACTCCCCTGCTCTTTTCCAGATCATGTTCTCACGAAACCACTCTCAT---------------------
-------------------------------------------GCATTCATATTTCCATGTCAAA---TCCAATGTACAG
TTGCATGTTTTCCTCAAAATGTTATTACTACAACAACTAGTTTTTTTAATGTCCTCTTAAGAAACA-TTTTTTCAGGTCA
AATATCACAATACTAGTATTTCTGTAAAATATTATTTACATCAGCAATTTTCAT--AATAACCATGGATCAATCAAAGTA
ATTGCAACAT-CATGAAAGCACCATGTTATCTTCAAAACAATCTTCAGCAACAACTCCATT-TTCCCGAGCAAATTGTTC
ATGACAACAATCCAATTTATTATATTTCGAAGTC---------------------------------AAATTTCCCAAGG
TACACTTGTATGTTTTCTTTAAAATATTTTTTTGACAAATGGTGGATTTTATTGGCTCAAACTGGAGTATTCAAAATGGA
GTGTCAAGAGGTTCATAATATTCTTTACACCGACTAGTATTTTCTCTTCCAAACATATATACTTGAGAAAAAATAAAATA
ATTTTCAAGATAAATATCCCAATCGTATGTGCTCTACAAATATTCTTACAACA---ATTGTTTCAGTAATGATCTGTAGA
ACAATCAAAGTAATGATGAAAATCAAGAAATCTAAATGCTATCTTCAAAATATTATTTACAACAGCAATTGTGTTTTTTC
GTGTGAGTGGGGACAATTAGCTTTCTTTCTAATAAATAGTTCTGAACAACAATCCAATTTATTATGTACTGCATTTACAT
ACCCCAAGTTAAATTACCAAATGTTCTCTTCTCTTGTATGTTTTCTTCAAAATGTTCTTTGCACCAAAATATTCTCAAAG
AACAAAACACAAATCGGCATATCCTCCTTCAGGCGACGTAGCGGTGAC------
>SNPs
-------S-S------------------------------------------S-------------S-------------
-------------S----S----S-S------S-------------S-----S-----------S---S-----------
--S-----------S----S-SS-SS-SSS-SSS-SS-------------------------------------------
-----S-----S----------------S-SSSS-------------------------------------------S--
-------S-----S---------S----S-------------S----------------S--S------S--S-------
-----------------------------------S-S----S--SS----S---------------------------S
-------------------------S--------S---------------S------S----------------------
--------S--SS---------------------------------------S-S-------------------------
--------S----------------------------------------S------------------------SS---S
------------------------------------------------------S-----------------------S-
---------------------------------S-------------------------------SS-------------
--S------------S----------S-----S--S----------SSSS----S--------S----SS----------
--------SSSSSS---------------------------S------S------S-S----------------------
-------------S------------------S-S---S-------------------------------------S---
---S--------S--------------------S----S------------------------------S----------
---------------------------S----------------------------------------------------
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---------------S--------S-------------------------------------------------------
--------------------------------------------S---SS------------------------------
-------------S--S----------------S----------------------------------------------
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--------------------------------------------------------------------------S-----
-------------------------------------S-------------------S-S-SSS------S---------
S-S------SS---------------------------------------------------------------------
----------------------------S----------S------S---S------S---S-SSS-SSSSS-SSSSSSS
-SSSSSSS-SS-S---SS-S--SSSSSS-SS-S----S--S-SSS--SSSSSS-S--SSSSSSS-S-SSSS--SS-SSSS
S-SSS-SSSS-SSSS-SS-SS-----------------------------------------------------------
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---------------------------------------------S----------S----S-----------------S
-----------S-----S-----S--------------------------------------------------------
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-----------------------------S------------------S-------------------------------
-----S-------------S----------S---------S------------S---------------------S----
---------S----S---S-------S---S-------S-----------------------------------------
-------------------S-S------------------------S---S-----------------------------
---------------------------------S----------------------------------------------
--S---SSS--------S----------------S-S-----------SSSSSS
>forward_935
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-----------------------------------TCTATTAATACCGCGCGCGT-------------------------
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>reverse_3978
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---------------------------------------------------------GCGAAACCACTCTCATCCCT---
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