>input_sequence_79318
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----------------------------------------------------------------ATGGACAACAAGAATG
GCGTCAAGGTCACCTACATCGAGACGCAGTTCGTCACCTCCGACGCCGCGGGCTTCAAGTCCCTCGTGCAGCGCCTCACC
GGCAAGCCATCCGGTGCCGCCGCCGCGCCCGCGCA------CCAGCTCCACAGGCCGCGGCCCCGCCACGCCGACGGGAG
GAGTGCTGCCACCACCGGACCGTCAGGCTATCGCATGCCCGCCACGGCAGGCCCCGTTAGCGCAGCGGCGAATGACGC--
----------------CGGCACCAGATCGTCAAGCTATCTCATTCCCGCCACGGCAGGCCCGGTTGGTGTAGCGGC----
--GAATGACGCGCGGACGGCGACGGCCCATGCCAACTCCGGCGCCGCGCAGTCGTCGTGCCTGGATGAGCTGCACGGCCT
CTGCGATTACACAGAGCTTTTCACCGTCGTCGGCGCGAGCGAACAGCAGCGTCACGGCAGTTACAGTGGTTTCCCCTATT
GA------------------------------------------------------------------------------
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>chr6B_1_TraesCS6B01G304300
TTTTGGCGTCAGTCTTACTATCCTGATACTCTGCCTCTGCGTAGGCTCTGTTGTTACTGTTAGACTTCTTTATCTTTTGG
TGTCGAGAGAACTTGGTGCTCCAGGGTTTTCGCCCCACAGTGGGCGTCTCAATTGCGAGCGTCTACAGTGGGTTTCCCTG
GCGTGCTTGAACTCGTTTTTTTCCTTTCCCTTTTTTCGCTCTCTTGGACATGGCTGTGTTTCCGTTATGTTCTATAATGG
AAAGGGGATTAGCCCGGTTCAAAAAAAAAAAAACAAGAGCACCACATGACGGGAAGGTGAAGATTCCGGAGGAAGCTCAC
AAGTCACAAGAATGCCGATTTGCAGAGGAGTTCACCGGAATGGGACGACGAGTTGAGGGTGGATGCCAGGACCACATAAC
CAGCACGAAGGGGGAGCATGGATGCCGGGGCCACGGAGGATGCATATTTGTTGTGATCTTGTTGTGCTTGCTTGTTATAT
TTGAGATCCGTCAACATCAAAGACAGGGAGAGAAAGAGAGGCGAGGAAGATAACAAGCGCCGTCAAAACCATACTCCC--
-----CCAGGGCCAGGAGCGCTTGACCAACTCTCCCTCCCGTTCTCCAAAAGTTGACCGTTATCTCACAAACTCCCTAGG
ACCGACCAGTCAAACACCTCGACTTGCTACCGCGGCCACAGCCACAGCCACTAGCACCTGCCAGCCTCGTCTCAACTCCC
TCCCACCACCACATGCCCTG--------ACCTGGTCCATCTTACG-CCTGCCAGCATGTCACTCTCTCCTCACTCGTGCC
TCGCAA-----CCCCAGAATACTTCTCACCCCCAGAATCTCAGCGCCGTCTCGTATCGTATATAAATAAACATCCCCGAA
CGGCTAGCATGACACACACAACCCTGAGGCTAGAGCGATCAAGAAACGAGCCAGCCGCACGTACGAGGAGATCGAGAAAA
CCGACCAAAGGC---ACCGCCACTGCACGCGCGCTCGCTCGATCAAGCAAGCAAGCAAGGACTCATGGACAACAAGAATG
GCGTCAAGGTCACCTACATCGAGACGCAGTTCGTCACCTCCGACGCCGCGGGCTTCAAGTCCCTCGTGCAGCGCCTCACC
GGCAAGCCATCCGGTGCCGCCGCCGCGCCCGCGCA------CCAGCTCCACAGGCCGCGGCCCCGCCACGCCGACGGGAG
GAGTGCTGCCACCACCGGACCGTCAGGCTATCGCATGCCCGCCACGGCAGGCCCCGTTAGCGCAGCGGCGAATGACGC--
----------------CGGCACCAGATCGTCAAGCTATCTCATTCCCGCCACGGCAGGCCCGGTTGGTGTAGCGGC----
--GAATGACGCGCGGACGGCGACGGCCCATGCCAACTCCGGCGCCGCGCAGTCGTCGTGCCTGGATGAGCTGCACGGCCT
CTGCGATTACACAGAGCTTTTCACCGTCGTCGGCGCGAGCGAACAGCAGCGTCACGGCAGTTACAGTGGTTTCCCCTATT
GAAGTGCAAGTGTAAATACAGAGCCTAGGGCTTTGTTTGGAATGTCGTTTCATCTCAAATACACCTGTAGAAAAGATACA
GATCTCCGCCCATCCTTTTGATTCCGGCTGAAAATCTACTGGTGGCCGGTAAGATACACGCGTAAACTAAATACGTCTGT
ATTTGATTACACCGCATCCAAGCGCAGCCTAGGTGTTAAAATTCAGTCTTTGTAACCATAGACAGCAGCATTTGTAAGAG
AGATGGCAGAGCAAGCATTTGTGTATGTAAAGTTGTAATCATTCTGGGAATCCACAAGATATATATATATATTCAACGTC
CGGGGCCTGTTTTTACTCGTAAATTCGATCTTGCATGCGTGCTAGAGGAGGCACAAGATATACTCCCTCCGTTCGTAAAT
ATAAGTCTTTTTAGAGATTCTAACAAGCGACTACATACGGAGCAAAATGGATGAATCTACATTTTAAAATATGTCTACAT
ACATCCGTATGTTGTAGTCTATTTGAAACCTCTAAAAAGACTTATATTTAGGAACGGAGGGAGTATTCAGCATTTGCCTG
GGAGGATTTTCCTTTTTCTCAAGACAG-------------------CCGAGTTTTGCG-CTCTTTAATTTGGACCGGTGA
CAGAGAGGTAATGCATGAAACATGCATGATTCGCTTGGCACTCACACTCTCTTATTGCACCGCTAATTTCTGCCCATCTC
TAAAAAGCTACAGCAGCGCAAACCAAAGCTGTGCTCTTAAGCAAGTTCTGCTACACTTAGATTAAGAACCAACTATATAT
TTTCAGTTGGTCGAACGCGTACTGTGAAAGCTGTCTTG--GAACAGGGAAATTCAAGAACAAAAGATCATACACAAGAAA
CATATATTTCCA---CATAATATTTGTAGGGTTGGACAGGGGCATTTTTAATCCATATACCATGATGGAAACATTCTTTC
TGTTTTGTGCAGTGCAACAACGGCAAATGGTCCTATGCAACATTGACTTGTACCGGGCTTTGCCTAT
>chr6D_272
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-------------------------------AACACGAGCACCACATGACGGAAAGGTGAAGATTCCGGAGGAAGCTCAC
AAGTCACAAGAATGCCGATTTGCAGAGGAGTTCACCGGAACGGGACGAAGAGTCGAGCATGGATGCCGGGACCACATAAC
GAGCACGAAGGGGGAGCATGGATGCCGG--------AGGGTGCACATTTGTTGTGATCTTGTTGTGTTTGCTTGTT--AT
TTGAGACCCGTCAGCATCAAAGACAGGGAGAGAAACAGAGGCGAGGAAGACAACAAGCGCCGTCAAAACCATACTCCCCC
AGGGGCCAGGGCCAGGAGCGCTTGACCAGCTCTCCCTCCCGTTCTCCAAAAGTTGACCGTTATCTCACTAACTCCCTAGG
A----CCAGTCAAACACCTCGACTTGCTACCGCTGCCACAGCCACGGCCACTAGCACGTGCCAACCTCGTCTCAACTCCC
ACT-ACCACCACATGCCCTGACGCCCTGACCTGGTCCATCTTACTCCCTGCCAGCATGTCACTCTCTCCTCACTCGTGCC
TCGCAACCCTTCCCCAGAATACTTCTCACCCCCAGAATCTCAGCGCCGTCTCG---------TATATAAACATTGCCGAA
CGGCTAGCATCACACACACGACCCTGAGGCTAGAGCGATCAAGAACCGAGCCAGCCGC----ACGAGGAGATCGAGAAAA
CCGACCAAAGGCGCCACCGCCACTGCCCGCGC------TCGATCGATCACC------------CATGGACAACAAGAATG
GCGTCAAGGTCACCTACATCGAGACGCAGTTCGTCACCTCCGACGCCGCGGGCTTCAAGTCCCTCGTGCAGCGCCTCACC
GGCAACTCAC------CCGCCGCCGCGCCCGCGCCCGCGCCACAGCTCCACAGGCCGCGGCCCCGCCACGCCGACGGGTG
GAGCGCTGCCACTGCTGGACCGTCAAGCTATCGCATGCCCGCCACGGCAGGCCCGGCCAGCGCAGCGGCGAATGACGC--
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-----------GCGGACGGCGGCGGCCGCTGCCCACGCCGGCGCCGCGCAGC---CGTGCCTGGATGAGCTGCACGGCCT
CTGCGATTACACGGAGCTTTTCACCGTCGTCGGCGCGAGCGAACGGCAGCGTGACGGCAGTTACAGTGGTTTCCCCTATT
GAAGTGCAAGTGTAAAT---------------------------------------------------------------
-----------------------------------------------------------------ACTAAATACACAG--
-------------------------AGTCTGGGTGTTAAAGTTCAGCCTTTGCAGCCATAGACAGCAGCATTTGTAAGAG
ACTTGACAGCGCAAACATTTGTGTATGTAAAGTTGTAATCATTGTGGGAGTTCACAAGATATATG----TATTCAACGTC
CGGGGCCTGTTTGTACTCGTGAATTCGATCTTGCATGCGTGCTAGAGGAGAGGAGAGGAGAGGAGGCACGAGATA-----
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---------------------------------------------------------------TATTCGACATTTGCCTG
GGAGCGTTTTCTTTTTCTAAGACAGCCAGGTGATTGATCCTTTTAACCGAGTTTTGCGGCTCTCTAATTTGGACCGGTAA
CAGAAAGGCAATGCATGAAATATGCATGATTCGCTTGGTACTCATACTCTCTTATTGCACTGCTAATTTCTGCCCATCTC
TATAAAACTACAGCATCGCAAACCAAAGCTGCGCTCTTAAGCAAGTTCTGTTACACTTGGATTAAGAACCAACTATATAT
TTTCAGTTGGTCGAAGGCATACCGTGAAAGATGTCTTAGAGAACAAGGAAATTCAGGGGGGAA--ATCACACACAAGAAA
CATATATTTCCTACGCATAATATTTGTAGTGCTGGACAGGGGCATTTTTATTCCATATACTATGATGGAAACATTCTTTC
TGTTTTGTGCAGTGCAACACCGGCAAATGGTCCTATGCAACATTGA---------------------
>chr6A_646
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------------AACACCTCGACTTGCTACCGCGGCCACTAGCACCTATA-------GTACCAACCTCGTCTCAACTACC
TCCCACCACCACATGCCCTGACGCCCTGACCCGGTCCATCTTACACCCTGCCAGCATGTCACTCTCTCCTCACTCGTGCC
TCGCAA-----CCCCAGAATGCTTCTCACCTCCAGAATCTCAGCGCCGTCTCG---------TATATAAACATCCCCGAA
CGGCTAGCATGACACACACAACCCCGACGCTAGAGCGATCAAGAACCGAGCCAGCCGC----ACGAGGAGGTCGAGAAAA
CTGACCAAAGGT------------------GC------TCGATCGATCAAGCGAGGAAGGATCCATGG---ACAGGAATG
GCGTCAAGGTCACCTACATCGAGACGCAGTTCGTCACCTCCGACGCCGCGGGCTTCAAGTCCCTCGTGCAGCGCCTCACC
GGCAACTCAC------CCGTCGCCGCCA---CGCCCGCGCGCCAGCTCCACAGGCCGCGGCCCCGCCACGCCGACGGGTG
GAGCGCTGCCACTGCTGGACCGTCAAGCTATCGCATTCCCGCCACGGCAGGCCCGGTTACCGCAGCGGCGAATGACGCGC
GGACGGCCAACGCCGGCGCCACCGGAGCGTCAAGCTATCTCATTCCCGCCACGGCAGGCCCGGTTAGTGTAGCGGCGATT
GAGAATGACGCGCGGGCGGCGGCGGCCGCTGGGCAGC---------------CGTCGGGCCTGGATGAGCTGCACGGCCT
CTGCGATTACACGGAGCTTTTCACCGTCGTCGGCGCGAGCGAACGGCATCGTGACGGCAGTTACAGTGGTTTCCCCTATT
GAAGTGCAAGTGTAAAT---------------------------------------------------------------
-----------------------------------------------------------------ACA------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S----------------S---------------------------
----------------------------------------S-------S----S---SS--------S------------
S---------------------------SSSSSSSS---S----S---------------------S---------SS--
------S------S---------------------S--------------S-----------------------------
----------------------------S---------------------------------------S-----------
-SSSS----------------------------------------S-----------S-----S----------------
--------------------------------------------S-----------------------------------
-----------------------------------------------------SSSSSSSSS--S---------------
---------------------------------------------S------------SSSS------------------
--------------------------S-----SSSSSS------S-S-----S--S-----SS-----------------
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-----SS--SSSSSSS------------------S-------------------------------------------S-
---S--------SS-S---------S----------------------------S-------------------------
------------------S----S--S--------------------------------------S--------------
---------------------S-----SS----S--S--------------S----------------------------
------------S-------------------------------S-------S---------------------------
-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS--S--S---------S-----S-----S-S-------------------------
-SS--S---S----S----------------------------S-----S-S------------SSSSS-----------
------------S-------S-----------------------------SSSSS--SSSSSSSSS-S-SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----SS----------
----SS-----S----SSSSS-S-SSS------------------------------------S--------------S-
----S---S-----------S-----------------S-----S---------------S-------------------
--S---S--------S---------------S------------------S-------S---------------------
---------------S--S---S-------S------S-------S---------S-SSSS--SS----S----------
-----------S-----------------S-S------------------S---------S-------------------
-------------------S--------------------------SSSSSSSSSSSSSSSSSSSSS
>forward_179
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-------------------------------------------------------------------------------G
GCGTGCTTGAACTCGTTTT-------------------------------------------------------------
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>reverse_1645
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--------------------------------------------GCCGGTAAGATACACGCGTA----------------
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