>input_sequence_79284
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--------------------------ATGGTTCTCATTGGCATGTCAAGCTCAAGCACTCCCATGTCAAGCTCC------
-------------AGCGCCCCCCTTGTTTCTCTTGAGGAGCAGCCACCACTTCCACTCATGGTTTGCCCTTTCTGCAACA
ATGGCAT-----GGTTCAGTGGTGGGTCTCTCGCACGACAAACAATCCAGGCAAGCACTTTTACAAGTGCGAGCACGAGT
GGGTATGTC---ATTTTATTTATCATTTA-TTCAGTACCGTTTTGTTGCGCTCAATTCCGTTCTGTTCCATGAACCCATC
TTCCTGTTTTCTTGATTG-TTTGAAGACTCGTAAATGCAACTTTTGGAAATGGGAGGAGAACTACATCAACGTCATACGT
GCCAAGTGGCCCAGGCTGTTCACTGTTGCATCCCGCGAAGACAGGGAATTCCACCGCATCATCATCGCCCTCCTCCTAGT
CAATCTGCTTGCTCTTTTCTTCGTATGCTGCAAGGTGGCTTGA-------------------------------------
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>chr4A_1_TraesCS4A01G078500
CAGGGACTTTTCTGCAAAATTAGCGCGACGGACCGATAATCGCTTTATTATTACTACTAGTAAGCTTGCA-CGTGCAAGT
GCACGTATAGACTGTCATCAATTAATTACC--AAGATAATAAAATTAGGCATGCAATGGGTGTCTTGACTAATATAAATA
TAAATACATTACAAGCCACTTAATGATAGACACAAAGGAAAAGAATCGATATATCTTTTTACAATATCATTAGGAAACAC
GACATTTAGCGAGCTTGTGCAACTTTAGTGAGAACATAAATCACAAAGAATTAATAAATAAAGCAAACAATCAATCTCAC
AATAACAAGCATCGTGGATCAAGAAGCTTCTCATAGTGAGACTGTATCATGTCCAATAACTCATGGATAGCCTAGATCCT
TAAGCTAGGAGAAAATAATATAAGTGGACGAAAAATGAAAAGATCTCAACATGTGGAAGCATGGCACATCCTAGAAAAAT
GAGAGACGTAAATCTACAAAA-AAGACATTAACAAATAGATAAGATTGTAAGAAGAACATCATAAGTACTCCCTCCGTTT
GAATGTTATTACATTCAATATGCGAGTATATCGGTTGTAATAACCGAAATTGCGTAGGAGCTCTCGGCGACCCCCCTCAC
TGTAATCTATCCCATCCACTAGCATTGGGATTCGCACTCACTATAATAGCGTCGTCATATTCACTGCTTTCCAACTTTAG
TATTCCTG-CGCACAGTGTGGGTATATCACCCGAACAGTACAACGCGTTTTCTCCCATAGTCCAGAAAAATGCATCTCCT
CCTGTCCTTCACCCCCTCTCATCCGCCAACATCCAACCACCCAGCTGAACTTAATGCACACGCTCCTCATTTCCTCA---
-------------------------CAACGGCTCAATCCTCA-GT-ACAACGGTCATCTTCCTCCTCTCCTCAGTTATAA
ACTTCTTGCAGCTTG-------CACATTCCG------------------------GCATATTGCATATCCACCATCTAGC
TCTCTCACTTTCCTCCTCTCTTGTAAATGGTTCTCATTGGCATGTCAAGCTCAAGCACTCCCATGTCAAGCTCC------
-------------AGCGCCCCCCTTGTTTCTCTTGAGGAGCAGCCACCACTTCCACTCATGGTTTGCCCTTTCTGCAACA
ATGGCAT-----GGTTCAGTGGTGGGTCTCTCGCACGACAAACAATCCAGGCAAGCACTTTTACAAGTGCGAGCACGAGT
GGGTATGTC---ATTTTATTTATCATTTA-TTCAGTACCGTTTTGTTGCGCTCAATTCCGTTCTGTTCCATGAACCCATC
TTCCTGTTTTCTTGATTG-TTTGAAGACTCGTAAATGCAACTTTTGGAAATGGGAGGAGAACTACATCAACGTCATACGT
GCCAAGTGGCCCAGGCTGTTCACTGTTGCATCCCGCGAAGACAGGGAATTCCACCGCATCATCATCGCCCTCCTCCTAGT
CAATCTGCTTGCTCTTTTCTTCGTATGCTGCAAGGTGGCTTGAATGCGCCGTTATCTCTCCCGACTTGTGTCTGCAATTC
AAGTTGTAGCCGCTTATGAATGAATCAATATGTTTTTATGTATCGTCCCTAACCACTTGTCATCCAA-------------
----------------------------------TGTAATCATGTATCACAACTTGTACTCCCCTCAGAT-TTCGTAACC
AGATGTATGTTTTAGT--TTTTTCATTATCTACCTTCTCAGTTATTATTTCACTTAACTTATCCGTCCTAAATGTTTATA
ATTTACGTCCAAATGTTGGTCCACGTCACACCGTACCTCTTCGCAATAAATCAACTCCTACCCCTACTGTTCATTTCGTC
CCCTAGTCAACGGTTCCCTGCCCAAAAGCCTGCTCCAACAGTCTTAATTGCCACTGTGTAACCATCAATACAGCCGACCC
GGTGCCCCCACACGCTTGCGTGCTCCCATTATAAACACCACCCCG-----CTGCACCAGTCCATTCCATTGCAAGCACAC
ACATT-TCGGTCCACCCATATCATACGCTACTCGATGCACTCTATGAGCTGGTTCTAACCCAACATCTGATATCTTCATC
ATTCAATCAAGGTATGTCTCAAGCAAGCGCCTATGTTTAGTCATGACAGTGGGCAA---------CCAAAAGCCGGAACG
TCTTAACTTTCGCAATATGTTCATTTTCCAGGATGTCATATTCACGTCCTAGTTCGTCACGCTTGCTCGAAGAGGTGCTA
GATGCAGCTGACCAACTAGATGACAGCTCAGATTCGCACCCAGGAGGTCTAGCCCCAACATCACACACTTCGGTAACAAA
AGTTGTCTCTCTTGTTTCGTCTTTCGACGAGTACAAAAGATTTCTTGTTAATGAAATTGGTTGGGGAGGGATACTTAAGC
TCCCATCACTGGCTCGTCTTAACCTACGTTTTAGCAAGTGGTGCATGAGCCGTCTTGATGGCCCCTCCATGTCTGTAATC
CTAAACGATCATAAAAGCCTGCGTTTCTGGCCTGGAGATGTTCATAAAGTTTTTGGTGTGTCGTGTGG
>chr1A_44
-------------------------------------------TTTTTTAATACTACTAGTAATGTTGCATCGTGCAAAC
GCACATCTAGATTGTCATCAATTAATTATATTAAGATAATAAAATTACGCATGCAATGGGTGTATTGACTAATATAAATA
TAAACACATTACAAGCCACTTAATGATAAATACAAATGAAAAGAATCA--ATATCTTTTTATAGTGTCATTAGGAAATAT
GGCATTTAACGACCCTGTACAACTTTACTGAGATTATAAATCACAAGGAATTAATAAATGGAGCAAACAATCAATCTCAC
AGTAACAAGCATCATGGATCAAGAAGCTTCTCATAGTGAGAC--TATCATGTCCAATAACTCATGGATAGCCTAGATCCT
TAAGCTAGGAGAAAATAATATAAGTGGACC-AAAATGAAAAGATCTCCACATGTGGAAGCATGACACATC-TAGAAAAAT
GGGAGACGTAAATCTGCAAAAGAAAACATTAACAAACAGATAAGATTGTAAGAAGAACATCATAAGTACTTCC-TCGTTC
GAATGTTATTACATCCAATATGCGATTATATCGGTTGTAATAAC------------------------------------
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>chr5A_55
------------------------------------------------------TACTAGTAAGCTTGCA-CGTGCAAGT
GCACGTATAGACTGTCATCAATTAATTACC--AAGATAATAAAATTAGGCATGCAATGGGTGTCTTGACTAATATAAATA
TAAACACATTACAAGCCACTTAATGATAGACACAAAGGAAAAGAATCGATATATCTTTTTACAGTATCATTAGGAAACAC
GACATTTAGTGAGCCTGTGCAACTTTAGTGAGAACATAAATCACAAGGAATTAATAAATGGAGCAAACAATCAATCTCAC
AATAACAAGCATCGTGGATCAAGAAGCTTCTCATAGTGAGACTGTATCATGTCCAATAACTCATGGATAGCCTAGATCCT
TAAGCTAGGAGAAAATAATATAAGTGGACGAAAAATGAAAAGATCTCAACATGTGGAAGCACGGCACATCCTAGAAAAAT
GGGAGACGTAAATCTACAAAA-A-AACATTAACAAACAGATAAGATTGTAAGAAGAACATCATAAGTACTCCCTTCGTTT
GAATGTTATTACATTCAATATGCGAGTATATCGGTTGTAATAAC------------------------------------
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>chr4A_56
-------------------------------------------------------ACTAGTAAGCTTGCA-CGTGCAAGT
GCACGTATAGACTGTCATCAATTAATTACC--AAGATAATAAAATTAGGCATGCAATGGGTGTCTTGACTAATATAAATA
TAAACACATTACAAGCCACTTAATGATAAACACAAAGGAAAAGAATCGATATATCTTTTTACAGTATCATTAGGAAATAC
GACATTTAGCGAGCCTGTGCAACTTTAGTGAGAACATAAATCACAAGGAATTAATAAATGGAGCAAACAATCAATCTCAC
ACTAACAAGCATCGTGGATCAAGAAGCTTCTCATAGTGAGACTGTATCATGTCCAATAACTCATGGATAGCCTAGATCCT
TAAGCTAGGAGAAAATAATATAAGTGGACGAAAAATGAAAAGATCTCAACATGTGGAAGCATGGCACATCCTAGAAAAAT
GGGAGACGTAAATCTACAAAA-AAAACATTAACAAACATATAAGATTGTAAGAAGAACATCGTAAGTACTCCCTCCGTTT
GAATGTTATTACATTCAATATGCGAGTATATCGGTTGTAATAAC------------------------------------
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>chr1A_599
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------------------------------------------ACCGAAATTGCGTAGGAGCTCTCGGCGACCCCCCTCAC
TGTAATCTATCCCATCCACTAGCATTGGAATTCACACTCACTATAATAGCACCGTCGTATTCACTGCTTTCCAACTTTAG
TATTCCTG-TGCACAGTGTGGGTATATCACCCGAACAGTACAACGCGTTTTCTCCCGTAGTCCAGAAAAATGCATCTCCT
CCTGTCCTTCACCCCCTCTCATCCGCCAACATCCAACCACCCAGCTGAACTTAATGCACACGCTCCTCATTTCCTCG---
-------------------------CAACGGCTCAATCCTCA-GT-ACAACGGTCATCTTCCTCCTCTTCTCAGTTATAA
ACTTCTTGCAGCTTG-------CACATTCCG------------------------GCATATTGCATATCCACCATCTAGC
TCTCTCACTTTCCTCCTCTCTTGTAAATGGTTCTCATTGGCATGTCAAGCTCAAGCACTCCCATGTCAAGCTCC------
-------------AGCGCCCCCCTTGTTTCTCTTGAGGAGCAGCCACCACTTCCACTCATGGTTTGCCCTTTCTGCAACA
ATGGCAT-----GGTTCAGTGGTGGCTCTCTCGCATGACAAACAATCCAGGCAAGAACTTTTACAAGTGCGAGCACGAGT
GGGTATGTC---ATTTTATTTGTCATTTATTTCAGTACCGTTTTGTTGCGCTCAATTCCGTTCTGTTCCATGAACCCATC
TTCCTGTTCACTTGATTG-TTTGAAGACTCGTAAATGCAACTTTTGGAAATGGGAGGAGAACTACATCAACGTCATATGT
GCCAAGTGGCCCAGGCTGTTCACTGTTGCATCCCGCGAAGACAGGAAATTCCACCGCATCATCATCGCCCTCCTCCTAGT
CAATCTGCTTGCTCTTTTCTTCGTATGCTGCAAGGTGGCTTGAATGCGCCGTTATCTCTCCCGACTTGTCTCTGCAATTC
AAGCTGTAGCCGCTTATGAATGAATCAATATGTTTTTATGTATCGTCCCTAACCACTTGTCATCCAA-------------
----------------------------------TGTAATCATGTATCACAACTTGTACTCCCCTCAGAT-TTCGTAACC
AGATGTATGTTTTAGT--TTTTTCATTATCTACCTTCTCAGTTATTATTTCACTTAACTTATCCGTCCTAAATGTTTATA
ATTTATGTCCAAACGTTGGTCCACGTCACACCGTACCTCTTCGCAATAAATCAACTCCTACCCCTACTGTTCATTTCGTC
CCCTAGTCAACGGTTCCCTGCCCAAAAGCCTGCTCCAACAGCCTTAATTGCCACTGTGTAACCATCAATACAGCCGACCC
GGTGCTCCCACACGCTTGCGTGCTCCCATTATAAAAACCACCCCG-----CTGCACCAGTCCATTCCATTGCAAGCACAC
ACATT-TCGGTCCACCCATATCATACGCTACTCGATGCACTCTATGAGCTGGTTCTAACCCAACATCTGATATCTTCATC
ATTCAATCAAGGTATGTCTCAAGCAAGCGCCTATGTTTAGTCATGACAGTGGGCAA---------CCAAAAGCCGGAAGG
TTTTAACTTTCACAATATGTTCATTTTCCAGGATGTCATATTCACGTCCTAGTTCGTCACGCTTGCTCGAAGAGGTGCTA
GATGCAGCTGACCAACTAGATGACAGCTCAGATTCGCACCTAGGAGGTGTAGCCCCAACATCACGCACTTCGGTAACAAA
AGTTGTCTCTCTTGTTTCGTCTTTCGACGAGTACAAAAGATTTCTTGTTAATGAAATTGGTTGGGGAGGGATACTTAAGC
TCCCAGCACATGCTCGTCTTAACCTACGTTTTAGCAAGTGGTGCATGAGCCGTCTTGATGGCCCCTCCATGTCTGTAATC
CTAAACGATCATAAAAGCCTGCGTTTCTGGCCTGGAGATGTTCATAAAGTTTTTGGTGTGCCGTGTGG
>chr3B_600
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-------------------------------------------CCGAAAACGCCTAGGAGCTCTCGGCGACTCCCCCAAC
TGGAATCCATCCCATCCACTAGCATTGGGATTCGCATTCACTATATTAGCTCCGTCGTATTCACACCATTTAACGTCTAG
TA-TTCATTTGCACAGT-GAGGTATATCACCTGAACAGTTCAACGCGCTTTCTCCCCTCGTCCAGACAAATTCACATCCT
CCAGTCCTTCTCCCCCTCTCATCCGCCAACTCCCAACTACCCATCTGAATTTAATGCTCACGCTTCACAATTTCTTG---
-------------------------CAACGGCTCAATCCTCA-CT-ACAACGGTCATCTTCCTCCTCTCGTCAGATATAA
AATACTTGCAGCTTG-------CAGCTTCCTCACTACTGCATATCATACCATCAAGAATAGTTCATACCAGCCATCAAAA
ACAGC-------TTCCTCCCTTGTACATGGTTCTCATTGCCATGTCTAGCTCAACCCATCCCATGTCAAGCTCC------
-------------AGCTCCCCCCTTGTTTCTCTTGAGGAGCAGCCACCACTTCCACTAATGATATGCCCTTTCTGCAACA
ATGGGAT-----GGTTCAGTGGTGGGTCTCCCGCACAGCAAACAATCCAGACAAGCACTTCTACAAGTGCGAGCACGAGT
GGGTATGTCCTAATACTTTTT-TCACTTG-TTGT---------------GTACTATCATGTTCTACTGCATGATCCCATC
TTCCTTTTTTCTTCCGTTTTTGCAAGACTCGCAAATGCAACTTTTGGAAATGAGAGGAGAACTACATCAACGTCATACGT
GCCAAGTGGCCGAGGCTGTTCACCGTCCCTTCCCGTGAAGACAGGAAATTACACCGCATCATCATCGCTCTCCTCCTAGT
CAATCTGCTCGCTCTGTTCTTAGTATGCTACAAGGTCGCTTGAAGCCGCCAGGACCTCTCCCGACTCCTGCCTGTCCTTC
AAGTTCAAGCCATTTTTTATTGAATAAATATGTTTATCTGTATTGTCTGTAACCAGTTGTCTTCCA--------------
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>chr1A_601
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--------------------------------------------CGAAATTGCATTGGAGCTCCCGGCGACTACACCCAG
TGTAATCCCTCCCGTCCACTAGCATTGGGATTCCCACTCACTATATTACCTGCTTTGTATTCACACCTTTTCACTTCTAG
TAATCCATTTACACTGC-TTGGTATATCATATAAACAGTGCA-CGCGTTCTCTTTCTCGGTCCAGACAAATGGATGTCCT
CCTGAAGCCGG-----TCTCACCTGCCAACTTCCAACCACCCAAATGTAGTTAATGCACGCGCTACACTCTTCCTCC---
-------------------------CAACGGCACAATGCTCA-CT-ACAATGGTCATCTTCCTCCTCTGA----------
--------------------------------ACAACTGCATATCATACCATCACGATCCTTTCTTATCTTCAAGCTTGC
TCTCTCACCTTGTTCCTCGCTGGTAGATGGTTCTCATTGCCACGTCAAGCTCAAGCATTCCCATGTCAAACTCC------
-------------AGCGTGCCCCTTGTTTCTCTGTAGGAGCAACCACCACTTCCCCTCATGGGTTGCCCTTTCTGCAACA
ATGGAATGGTTCGGTTCAGTGGTGGGTCTCCCGCACTACAAACAATCCAGGCAAACACTTTTACAAGTGCGAGCACGGGT
GGATATGTCCTAATATCTTCAT--AATTT-TTTT---------------GTACTATCTCGTTCTTCTGCTAGATTTGTTC
TTCGCGTTCTCTCCTCTTTTTTGTAGTCGCGCAAGTGCACCTTCTGAAAATGGGAGGAAAACTACATCAACGTCATACGT
GCCAAGTGGCCAAGGCTGTTCATCACCGCTTCCCGTGAAGACAGGAAATTCCACCGCATCATCATCGCTCTTCTCTCAAT
CAATCTGCTCGCCCTGTTGTTCGTATTCTGCAAGGTGGCCTGAAGCCGCCAGTAACTTCAAGATGCT-TGTCTGTGCTTC
AAGTTCCACCCGCATAATAATGAAGAATCATGTT----------------------------------------------
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>chr3A_601
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--------------------------------------------CGAAAATGCCTAGGAGCTCTCGGCGACTCCCCCCAC
TGGAATCCATCCCATCCACTAGCATTGGGATTCGCACTCGCTATATTAGCTCCGTTGTATTCACACCATTTAACATCTAG
TA-TTCATTTGCACAGT-GAGGTATATCACCTGAACAGTTCAACGCGCTTTCTCCCCTCGTCCAGACAAATTCACATCCT
CCTGTCCTTCTCCCCCTCTCATCCGCCAACTCCCAACTACCCATCTGAATTTAATGCTCACGCTTCACAATTTCTCG---
-------------------------CAACGGCTCAATCCTCA-CT-ACAACGGTCATCTTCCTCCTCTCGTCAGATATAA
AATACTTGCAGCTTG-------CAGCTTCCTCACTACTGCATATCATACCATCAAGAACAGTTCATACCAGCCATCAAGT
ACAGC-------TTCCTCCCTTGTACATGGTTTTCATTGCCATGTCTAGCTCAACCCATCCCATGTCAAGCTCC------
-------------AGCTCCCCCCTTGTTTCTCTTGAGGAGCAGCCACCACTTTCACTAATGATATGCCCTTTCTGCAACA
ATGGGAT-----GGTTTAGTGGTGGGTGTCTCGCACGACAAACAATCCAGGAAAGCACTTTTACAAGTGCGAGCACGAGT
GGGTATGTCCTAATACTTTAA-TCAATTT-TTGT---------------GTACTATCCTGTTCTACTGCATGATCCCATC
TTCCTTTTTTCTTCCGTTTTTGCAAGACTCGCAAATGCAACTTTTGGAAATGAGAGGAGAACTACATCAACGTCATACAT
GCCAAGTGGCCGAGGCTGTTCACCGTCCCTTCCCGCGAAGACGGGAAATTACACCGCATCATCATCGCTCTCCTCCTAGT
CAATCTGCTCGCTCTGTTCTTCGTATGCTGCAAGGTCGCTTGAAGCCGCCAGGACCTCTCCCGACTCCTGCCTGTCCTTC
AAGTTCAAGCCGTTTTTTATTGAATAAATATGTTTATCTGTATTGTCTAAAACCAGTTGTC-------------------
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>chr3A_601
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--------------------------------------------CGAAAATGCCTAGGAGCTCTCAGCGACTCCCCCCAC
TGGAATCCATCCCATCCACTAGCATTGGGATTCGCACTCGCTATATTAGCTCCGTTGTATTCACACCGTTTAACATCTAG
TA-TTCATTTGCACAGT-GAGGTATATCACCTGAACAGTTCAACGCGCTTTCTCCCCTCGTCCAGACAAATTCACATCCT
CCTGTCCTTCTCCCCCTCTCATCCGCCAACTCCCAACTACCCATCTGAATTTAATGCTCACGCTTCACAATTTCTCG---
-------------------------CAACGGCTCAATCCTCA-CT-ACAACGGTCATCTTCCTCCTCTCGTCAGATATAA
AATACTTGCAGCTTG-------CAGCTTCCTCACTACTGCATATCATACCATCAAGAACAGTTCATACCAGCCATCAAGT
ACAGC-------TTCCTCCCTTGTACATGGTTCTCATTGCCATGTCTAGCTCAACCCATCCCATGTCAAGCTCC------
-------------AGCTCCCCCCTTGTTTCTCTTGAGGAGCAGCCACCACTTTCACTAATGATATGCCCTTTCTGCAACA
ATGGGAT-----GGTTTAGTGGTGGGTGTCTCGCACGACAAACAATCCAGGAAAGCACTTTTACAAGTGCGAGCACGAGT
GGGTATGTCCTAATACTTTAA-TCAATTT-TTGT---------------GTACTATCCTGTTCTACTGCATGATCCCATC
TTCCTTTTTTCTTCCGTTTTTGCAAGACTCGCAAATGCAACTTTTGGAAATGAGAGGAGAACTACATCAACGTCATACAT
GCCAAGTGGCTGAGGCTGTTCACCGTCCCTTCCCGCGAAGACGGGAAATTACACCGCATCATCATCGCTCTCCTCCTAGT
CAATCTGCTCGCTCTGTTCTTCGTATGCTGCAAGGTCGCTTGAAGCCGCCAGGACCTCTCCCGACTCCTGCCTGTCCTTC
AAGTTCAAGCCGTTTTTTATTGAATAAATATGTTTATCTGTATTGTGTAAAACCAGTTGTC-------------------
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>chr3A_601
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--------------------------------------------CGAAAATGCCTAGGAGCTCTCGGCGACTCCCCCCAC
TGGAATCCATCCCATCCACTAGCATTGGGATTCGCACTCGCTATATTAGCTCCGTTGTATTCACACCATTTAACATCTAG
TA-TTCATTTGCACAGT-GAGGTATATCACCTGAACAGTTCAACGCGCTTTCTCCCCTCGTCCAAACAAATTCACATCCT
CCTGTCCTTCTCCCCCTCTCATCCGCCAACTCCCAACTACCCATCTGAATTTAATGCTCACGCTTCACAATTTCTCG---
-------------------------CAACGGCTCAATCCTCA-CT-ACAACGGTCATCTTCCTCCTCTCGTCAGATATAA
AATACTTGCAGCTTGCAGCTTGCAGCTTCCTCACTACTGCATATCATACCATCAAGAACAGTTCATACCAGCCATCAAGT
ACAGC-------TTCCTCCCTTGTACATGGTTCTCATTGCCATGTCTAGCTCAACCCATCCCATGTCAAGCTCC------
-------------AGCTCCCCCCTTGTTTCTCTTGAGGAGCAGCCACCACTTTCACTAATGATATGCCCTTTCTGCAACA
ATGGGAT-----GGTTTAGTGGTGGGTGTCTCGCACGACAAACAATCCAGGAAAGCACTTTTACAAGTGCGAGCACGAGT
GGGTATGTCCTAATACTTTAA-TCAATTT-TTGT---------------GTACTATCCTGTTCTACTGCATGATCCCATC
TTCCTTTTTTCTTCCGTTTTTGCAAGACTCGCAAATGCAACTTTTGGAAATGAGAGGAGAACTACATCAACGTCATACAT
GCCAAGTGGCCGAGGCTGTTCACCGTCCCTTCCCGCGAAGACGGGAAATTACACCGCATCATCATCGCTCTCCTCCTAGT
CAATCTGCTCGCTCTGTTCTTCGTATGCTGCAAGGTCGCTTGAAGCCGCCAGGACCTCTCCCGACTCCTGCCTGTCCTTC
AAGTTCAAGCCGTTTTTTATTGAATAAATATGTTTATCTGTATTGTCTAAAACCAGTTGTC-------------------
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>chr3B_601
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--------------------------------------------CGAAAATGCCTAGGAGCTCTCGGCGACTCCCCTCAC
TGTAATCCATCCCATCCACTAGCATTGGGATTCGGACTTGCTATATTAGTTGCGTCGTATTCACACCATTTAACGTCTAG
TG-TTCATTTCTACAGC-GTGGTATATCACCTGAACAGTTCAACGCGCTTTCTCCCCTCGTCCAGACAAAGTCACATCCT
CCTGTCCTTCTCCCCCTCTCATCCGCCAACTCACAACTACCCATATGAATTTAATGCACACGCTCCTCAATTTCTCG---
-------------------------CAACGGCTCAATCCTCA-CTAACAACGGTCATCTTCCTCCTCTCGTCAGATATAA
AATACT-------TGCAGCTTGCAGCTTCCTCACTACTGCATATCATACCATCAAGAACAGTTCATATACACCATCAAGA
ACAGC-------TTCCTCCCTTGTACATGGTTCGCATTGCCATGTCTAGCTCAAGCGCTCCCATGTGAAGCTCCAGCTCC
CCCTTGTTTCTCTAGCTCCCCCCTTGTTTCTCTTGAGGAGCAGCCACCACTTCCACTCATGATTTGCCCTTCCTGCAACA
ATGGGAT-----GGTTCAGTGGTGGGTCTCTCGCACGACAAACAATCCAGGCAAGCACTTTTACAAGTGCGAGCACAAAT
GGGTATGTCCTAATACTTTTTTTCAATTT-TTCT---------------GTTCTATCCAGTCCTAGTGCGATATCCCATC
TTCATTTTTTCTTTCGTTTTTGCAAGACTCGCAAGTGCAACTTTTGGAAATGGGAGGAGAACTACATCAACGTCATACGT
GCCAAGTGGCCGAGGCGGTTCACCGTCTCGGCCCGCGAAGACACGAAATTCCACCGCATCATCATCGCTCTCCTCCTAGT
CAATTTGCTCGCTCTGTTCTTCGTATGCTGCAAGGTCGCTTGAAGCCGCCATGACCTCTCCCGACTCGTGCATGTCCTTC
AAGTTCAAGCCGCTTACCAATGAATAAATATGTTTATCTGTATTGTCTATAACCAGTTGTCATCCA--------------
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>chr1A_602
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---------------------------------------------GAAAATGCCTAGGAGCTCTCGGCGACTCCCCCCAC
TGTAATCCATCCCATCCACCGGCATTGGTATTCGCACTCACTATATTAGCTCCGCCGTATTCACATCATTTAACGTGTAC
TA-TTCATTTCTAAAGT-ACGGTATATAAACTGAACAGTGCAATGCGCTTTCTCCT-TTGTCCAGGCAATTTCACATCAT
CTTGTCCTTCTCCCCA-CTCGCCCGCCAACTCCCAACCACCCATCTGGATTTAATGCTCACGCTTCACAATCTCCTGCAA
CGGCTCAATCCAAAGCTACAACGGTCATCGACTCAATCCAAAGCT-ACAACGGTCATCTCCCTCCTCTCGTCAGATATAA
AATGCT-------TGCAGCTAGCAGCTTCCTCACTACTCCATATCATACCGTCAAGAACATTTCATACCACCCATTCAGA
ACAGC-------TTCCTCCCTTGTACATGGTTCTCATTGCCATGTCTAGCTCAACCCATCCCATGTCAAGCTCC------
-------------AGCTCCCCCCTTGTTTCTCTTGAGGAGCAGCCACCACTTCCACTCATGATCTGCCCTTTCTGCAACA
ATGGTAT-----GGTTTAGTGGTGGGTCTCTCGCACGTCAAACAATCCAGGCAAGCACTTTTACAAGTGCGAGCACGAGT
GGGTATGTCCTAATTCTTTTT-CCACTAT-CTCT---------------GTACTATCCTGTTCTAT--CCTGTAACCATC
TTCCTTTTTTCTTCCGATTTTGCCAGACTCACAAATGCAACTTTTGGAAATGGGAAGAGAACTACATCAACATCATATGA
GCCAAGTGGCCGAGGCTGTTCACCGTCCCTTCCCGCGAAGACAGGAAATTCCACCGCATCATCTTCGTTCTCCTTCTGGT
CAATCTGCTCGCTCTGCTCTTTGTATGCTGCAAGGTCGCATGAAGCCGGCGGGAGCTCTCCCGACTAGTGCATGTCCATC
AAGTTCAAGCCGCTCTTTATTGAATAAATTTGTTTATCTGTATTGTCTGTAACCAGCTACCATCCACTTGCAAATTCTAT
TT--TTTATTTTAATCCACCTTATGATTAGATGTTGTAATCATGTATCAGAACTAGTACCCCTTTCACGCATTCGTAATC
AGATTTATGATGTATGAATTTTTAGTTATCCACCTTCTCCATTACC---------------TCTGTCATTATTGTTCATT
ATTTACGTCCATC-------CCACACCACATTGTACCATCTCTCAATAAATAACCTCTCCCCCCAAAGTCAACA------
-------------TTCCCTGCCCAAAAGGCTGCTTCAACAGGCATAAATGCTCCTGTGCAACCATCAATATCGTCCACCG
GCTGTCCCAACACGCTTGCTTCCTCCAATTATAAACCCCCCTACACATATCTGCACAAATGTATTCCATCCCAACCAGAC
ACCCAATCCGTCCACCCACGCCATAGGCTTCACCACGCATAGCAAGACCTGCTTTTATCTAAAGATTCCGTATCTTCATC
ATTTAACCAAGGTATGTCTCAAACAAGCGTACATGCTTTCCCATCGGTTGCATCTTATTTCATCCCTAAAAGGAGAAAAC
TAACTACTTTATCAATTTTTTCATGTTCCAAGATGTCATATTCACGCCCTAGTTCATCACGCTTGATCGAAGAGGTGCTA
GATGCAGCTGACCAACTCGATGACAGCTCAGATTCTCATCCGGGAGGTTTAGCACCAACTTCACGCACGTCCGTAACAAA
AGTTGTTTCTATTGTTTCGTCTTTCAACGAGTACAAAAGATTTCTTGTTAATGAAATTGGTTGGGGAGGGATTCTTAAAC
TCCCAGCACTCGCCCGACTTAATCTACGTTTTAGCAAGTGGTGGATGAGTCGTCTTGATGGGCCTTCCATGTCTGTACAC
CTAAATGCCACTAAAAGGCTTCGTTTCTGGCCTGGAGATGTTCACAAAGTATTTGGTGTGCCATGTGG
>chr1A_873
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-------------------------CATCGGCTCAATCCAAAGCT-ACAATGGTCATCTTCCTCCTCTCGTCAGATATAA
AGTGCT-------TGCAGCTAGCAGCTTCCTCACTACTCAATATCATACCGTCAAGAACATTTCATACCACCCATTCAGA
ACAGC-------TTCCTCCCTTGTACATGGTTCTCATTGCCATGTCTAGCTCAACCCATCCCATGTCAAGCTCC------
-------------AGCTC-CCCCTTGTTTCTCTTGAGGAGCAGCCACCACTTCCACTCACCATCTGCCCTTTCTGCAACA
ATGGTAT-----GGTTCAGTGGTGGGTCTCTCGCACGTCAAACAATCCAGGCAAGCACTTTTACAAGTGCGAGCACGAGT
GGGTATGTCCTAATTCTTTTT-CCACTAT-CTCT---------------GTACTATCCTGTTCTAT--CCTGTAACCATC
TTCCTTTTTTCTTCCGATTTTGCCAGACTCACAAATGCAACTTTTGGAAATGGGAAGAGAACTACATCAACATCATACGA
GCCAAGTGGCCGAGGCTGTTCACCGTCCCTTCCCGCGAAGACAGGAAATTCCACCGCATCATCATCGTTCTCCTTCTGGT
CAATCTACTTGCTCTGCTCTTTGTATGCTGCAAGGTCGCATGAAGCCGCCGGGAGCTCTCCCGACTAATGCATGTCCATC
AAGTTCAAGCCGCTCTTTATTGAATAAATTTGTTTATCTGTATTGTCTGTAACCAGTTGCCATCCACTTGCAAATTCTAT
TTTTTTTATTTTAATCCACCTTATGATTAGATGTTGTAATCATGTATCAGAACTAGTACCCCTTTCACGCATTCATAATC
AGATGTATGATGTATGAATTTTTAATTATCCACCTTCTCCATTACC---------------TCTGTCATTAGTGTTCATT
ATTTACGTCCATC-------CCACACCACATTGTACCATCTCTCAATAAATAACCTCTCCCCCCAAAGTCAACA------
-------------TTCCCTGCCCAAAAGGCTGCTTCAACAGGCATAAATGCTCCTGTGCAACCATCAATATCGTCCACCA
GCTGTCCCAACACGCTTGCTTCCTCCAATTATAAACCCCCCTACACATATCTGCACAAATGTATTCCATCCCAACCAGAC
ACCCAATCCATCCACCCACGCCATAGGCTTCACCACGCATAGCAAGACCTACTTTTATCTAAAGATTTCATATCTTCATC
ATTTAACCAAGGTATGTCTCAAACAAGTGTACATGCTTTCCCATCGATTGCATCTTATTTCATCCCTAAAAGGAGAAAAC
TAACGACTTTATCAAATTTTCCATGTTCCAGGATGTCATATTCACGCCCTAGTTCATCACGCTTGATCGAAGAGGTGCTA
GATGCAGCTGACCAACTCGATGACAGCTCAGATTCTCATCCGGGAGGTTTAGCACCAACTTCACGCACGTCCGTAACAAA
GGTTGTTTCTATTGTTTCGTCTTTCGACGAGTACAAAAGATTTCTTGTTAATGAAATTGGTTGGGGAGGGATTCTTAAAC
TCCCAGCACTCGCCCGACTTAATCTACGTTTTAGCAAGTGGTGCATGAGTCGTCTTGATGGGCCTTCCATGTCTGTACAC
CTAAATGCCACTAAAAGGCTTCGTTTCTGGCCTGGAGATGTTCACAAAGTATTTGGTGTGCCATGTGG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---S-----------------------------
--------------------------------------------------------------------------------
----S----------------------------------------------------------S----------------
--------------S-------------------------------S------------SS-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S----------------------S-----------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------SS----S-----------------------
---------S----------------------------------------------S-----------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
-S---------S--------------------------------------------------------------------
------------------------------------------------S---------------S---------------
--------------------------------------------------------------------------------
-----S----S---------------------------------------------------------------------
------------------------------------------------------------S-------
>forward_30
----------TCTGCAAAATTAGCGCGACG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>reverse_1854
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TGTTGGTCCACGTCACACC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
