>input_sequence_79247
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------------------------------------ATGGCCGCAGCGAAACTCGCCCTTCTCATCCTAGTCGCCGCCGC
GGTCGCCTGCACCGGCA------ACAGCCAGAGTCCGGTGCAACTGTGTGACTACGAGTTTGTTGTCTCAACGTTCAATG
AAAATTGGGCGGGCACGGACTCAGATCTCACATTCACCGTGTTCAGCACGGAGGTCGTGGGCGGCGTCGCCATGAAAACT
CTGCAAAGTGCCGCTGGTTCCAGGTTCGACGTGGGCAGTA-------AGACCAAGTTCACCATCCAGGGCGGGCCGTGCG
TGAAACCATGCGGCCTCCGCCTAGAGGTTCACAAAACCTGGTGGCTGGAGATCGGGAGCGACTGGAAGTGCCGTTCCGTC
GACTTTGTGGTAAAGCGGAACGGGGTGGTGCAGTGGCATGTCTATCTCATTTTC---AATCAGTGGGTGAC---------
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----------------------------------CGACGGCAACCCCGTCGAATA-------------------------
----------------------------------------------------------------------CAAGTCCGGG
CAGTGCCCGATCCTCTAG--------------------------------------------------------------
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>chr1B_1_TraesCS1B01G390200
GCCTGTCAGGCACTGGCGAGTTTATTTCGAGCGGAACTCGGCTAATGTGCTACACTGCCAAGTTTCTTTCTTTCGCCAAG
TCCCTTTTTCTTGGCACACTAGGCAAACGTCGAAGTTTGGCGAGTAGCTCGCCACTGTCAAGTCCAATTATCAAGAAACT
CGGCAGACACATTACTCCGTCGAGCTCCTGATGAATTGAACTCAGCGAAGCCATAGAACTAGGCGAAATCCCAGATTCCA
GTAGTGTGACCTCATGTCCTAGGATGACCTCAGCGCTTACATCAAGTCCTAGGATGACATCATATCTGACCTCACTGTTT
TAGACAAGGTTTAATCCTACGGACTCCAACACAC--TACATGTAATAGAAAAAAAACTCTAATATCTACTGGTTCCGTCC
GCGAATAAGTGTACATCTAGC-TTTGTCCTAAATCAAAGTTTTAAAACTTTGATCAACTTTATAGGGAAAAGTAGCAGCA
TGTATGACACTAAATTAGTATCACTAGATCCTTTTTGAAATGTACTTTCGTAATATACAAACTTGATGTCATATATGCTA
CTACTATTTTTTG--TAAAGTTGGTCAAAATTTTAAGAC-TTTGACTTA--------------------GAACAAAACGT
AGAATTGCACTTATTCACGGACGGAGGCAGTATAG--------GAAAGAAGCAAATTCCAGCAATCACCCCATCACAATG
TGCTCGGCGCCTCGTACTGAGCTTGTCAACTTGGTGCATAGGATTAGCA--------CTAGCTAGCTAG-----------
----CTAGGTTCATGTGGTGTAGTAATGGCTAGGAACGTGATAGATGGTAAAAGTCAGCTCGGGGCGTGTAGGATAGGAG
AAGCATAATCGCACGGTGACCTCCCTGGCCAAGAG--CTATATAAATCCAGCTACCTAGCTGCTCAACATGCATCGAAAG
CCGGAG-----------------AGCAACTCATCTATCTATCCATCGATCCATCCATCTATAGACTACACCGTATTCATA
TTCATATCGGAGGTAAGCTAGCTAGCCACCACGACCATGGCCGCAGCGAAACTCGCCCTTCTCATCCTAGTCGCCGCCGC
GGTCGCCTGCACCGGCA------ACAGCCAGAGTCCGGTGCAACTGTGTGACTACGAGTTTGTTGTCTCAACGTTCAATG
AAAATTGGGCGGGCACGGACTCAGATCTCACATTCACCGTGTTCAGCACGGAGGTCGTGGGCGGCGTCGCCATGAAAACT
CTGCAAAGTGCCGCTGGTTCCAGGTTCGACGTGGGCAGTA-------AGACCAAGTTCACCATCCAGGGCGGGCCGTGCG
TGAAACCATGCGGCCTCCGCCTAGAGGTTCACAAAACCTGGTGGCTGGAGATCGGGAGCGACTGGAAGTGCCGTTCCGTC
GACTTTGTGGTAAAGCGGAACGGGGTGGTGCAGTGGCATGTCTATCTCATTTTC---AATCAGTGGGTGAC---------
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----------------------------------CGACGGCAACCCCGTCGAATA-------------------------
----------------------------------------------------------------------CAAGTCCGGG
CAGTGCCCGATCCTCTAGCACGGCGGCGCC--ATGCATGATCAGGACGCGACGGCCGGCCGGGGTCGCGAGTGCGTGCGT
GT----TGAGGTACGGTACTCGTTTGTGGCCGCGCGTGACTGTTTTGTTTAGTTTCCTTTTCTTCCGGCAGCTCCCATGA
ATAAGGTGTGCCTTGTCATGTGTACGTACGT--------------------------GTCCGGTGTGTGTGTTTGGCTAT
CTACCTATAGGCAGCCGGGCTCCTCGTCTTATTTTCCATCATTGTTGTTCTTGT----TTCCTTTCCTTTCCTCACAATA
TTAATAAAATAAGATCCTGCCTTCATTGTTGTTCTTATTTTCCATGA--------------TCCA---------------
---------------------------------------------------------------------TCCATGCATGA
TTACTCATCTATTTCCCGACGTGCATCCTCTGCCGTGTATGTATATATCCAGTTTGTTGTTTGGTTTAAGTACGCGAGCA
TACTGTGTTCGTTGATTGA---------------------ATGAATACTAAAGCTACCAGCACATCAAA-ACTTACACTC
CCAACAG-------------------------------------------------------------------------
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------------------------------ATGGAAAACTTGTGCGAGCATCGTTTGTTTTCAAG-AAACAAAAATGGAG
AC--CCTCTTCCAAAATTCCTGCACCTTTGG-------------------------------------------------
---------------------------------ATCATATTTTGCCAACTAATCTCATAGGTTTATTTTCTTAACTATCT
GCCCGTAGATG---TAGCAAAAGGTCGACCTTGTCCCCTCATATTGTTGGGCATTGTCTTGGTAATAAAATGGATCCTTT
CTTCTACCTCCTGTGTGCGTCTCGTACACATCGAGGGACTCGTTTGTGGTTTCCCTATTGATCACATAACCGATAACACT
ATCACAACCCTTAACTTTGTATGACTTTGTTGCTTAATCAAAAAATTGCCCATGTTCTAAAGATAACCTTGTTCGTGCGG
ATGGATCTACAGATATTTTTAGATGAATAGCGCAACTTTATTTCATTGTTCAACGAAAAGAGGGATACAAAGATGTCCAG
GGAGGTC-AAAAAACCAAACATGATGCCCCACCGCAAGTGTGGTCGCCATTCTAGCTAGTCTATTTGATTCCCCATTGCT
TTCACG
>chr1B_1
GCCTATCAGGCACCGGCAAGTTTATTTCGGGCGGAACTCCGCTAATGTGCTACACTGCCGAGTTTCTTTCTTTCGCCGAG
TCCCTTTCTCCTGG--CACTAGGCAAACGTCGAAGTTTGGTGAGTTACGCGGTACTGTCAAGTCCAATTATCAAGAAACT
TGGTAGACACATTACCCCGTCGAGCTCCCGATGAATTGAACTCAGCGAAGCCATAGAACTAGGCGATATCCGAGATTCCA
GTAGTGTGACCTCATGTCCTAGGATGACCTCAGCGCTTACATCAAGTTCTAGGATGACACCATATTTGACCTCACTGTTT
TGGACAAGGTTTAATCCTACGGACTCCAACACACTCTACATGTAATAGAAAAAAAACTCTAATATCTACTTGCTCCGTCC
ACGAGTTAGTGTACATCTAACTTTTGTCCTAAATCAAAGTTTTAAAATTTTGATCAACTTCATAAGGAAAAGTAGCAGCA
TGTATGACACTAAATTAGTATCACTGGATCCTTTTTGAAATGTACTTTTGTAATATACCAACTTGATGTCATGTATGCTA
CTACTATTTTTT-TATAAAGTTAGTCAAAATTTTAAGAC-TT-GACTTA--------------------AAATAAAACGT
AGAAGTGCACTTATTCACGGACGGAAGCAGTATAG--------GAAAGAAGCAAATTCGAGCAATCACCCCATCACAATG
TGCTCGGCGCCTCGTACTGAGCTTGTCAACTAGGTGCATAGGATTAATA--------CTATCAAGCTAGCTAGCTAGCTA
GGTACTAGGTTCATGTGGTGTAGTAATGGCTAGAAACGTGATAGATGGTAAAAGTCAGCTCGGGGCGTGTAGGA-----G
AAGCATAATCGCACGGTGACCTCCGTGGCCAAGAG--CTATATAAATGCAGCTACCTAGCTGCTCAACATGCATCGAAAG
CCGGCGAGCAAGCGCAAGTAGCTAGCAACTCATCCATCC--------ATCCATCCATCTATTTACGAGCA----------
--------------AAGCTAGCTAGCCACCACGACCATGGCCGCAACGAAACTCGCCCTCGTCATCCTCGTCGCCGCCAC
GGTAGCCTGCACCTGCA------ACAGC------CAGGTGCAACTGTGTGACTACGAGTTTGTTGCCTCGACGTTCAATG
AAAATTGGGCGGGCACGGACTCAGATCTGACGTTCACCGTGTTCAGCACGGAGGTCGTGGGCGGCGTCGCCATGAAAACT
CTGCAAAGTGCCGCTGGTTCCAGGTTCGACGTGGGCAGTA-------AGACCAAGTTCACCATCCAGGGCGGGCCGTGCG
TGAAGCCATGCGGCCTCCGCCTGGAGGTTCACAAAACCTGGTGGCTAGAGGTCGGGAGCGACTGGAAGTGCCGTTCCGTC
GACCTCTTGGTAAAGCGGAACGGGGCGGTGCAGTGGCATTTCTATATCATCTTC---AATCAGTGGGTGAA---------
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----------------------------------AGACGGCTCCCCCGTGGAATA-------------------------
----------------------------------------------------------------------CAAGCCGGCG
CAGTGCCCGATCCTCTAGCACGGCGACGCC--ATGCATGACCAGGACGTGACGGCCGGCCGGGGTCGCGAGTACGTGCGT
GT----TGAGGT-----------TTGTGGCCGCGTGTGAATGTTTTGTTTAGTTTCCGTTTCTTCCGGCAGCTCCCATGC
ACAAGCTGTATCTTGTCAT-------------------------------------------------------------
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------
>chr1D_1
GCCTGTCAGTCACCGGCGAGTTTATTTCGGGCGGAACTCCGCTAATGTGCTAC-CTGCCGAGTTTCTTTCTTTCGTCGAG
TCCCTTTTCCCTGG--CACTAGGCAAACGTCGAAGTTTGGCGAGTTGTGCGTCACTGACAAGTCCAATTATCAAGAAACT
CGGCTGACACATTACTCCGTCGAGCTCCCGATGAATTGAACTCAGAGAAGCCATAGA-CTAGGCGCTATCCGAGATTCCA
GTAGTGTGACCTCATGTCCTAGGATGACCTCAGCGCTTACATCAAGTCCTGGGATGACATCATATCTGACCTGACTGTTT
TAGACAAGGTTTAATCCTCCGGACTCCAACACACTCTAGATGTAATAGAAA-AAAACTCTAATATTTACTCGTTCCGTCC
GCGAGTAAGTGTACATCTAGCTTTTGTCCTAAATTAAAATTTTAAAACTTTGATCAACTTTGTAGGGAAAAATACCAGCA
TGTATGACACTAAATTAGTATCACTAGATCCTTTTTGAAATATACTTTCGTAATATACCAACTTGATGTCATATATGCTA
CTACTATTTTTT--CTAAAGTTGATCAAAATTTTAAGAATTT-GACTTA--------------------GAAC-AAATGT
AGAAGTGCACTTATTCACGGACGGAGGTAGTACAG--------GAAAGAAGCAAATTCGAGCAATCACCCCATCACAATG
TGCTCGGCGCCTCGTACTGAGCTTGTCAACTTGGTGCATATGATTAACACTAGCTAGCTAGCTAGTTAG-----------
----CTAGGTTCATGTGGTGTAGTAATGGCTAGGAACGTGATAGATGGTAAAAGTCAGCTCGGGGCGTGTAGGA-----G
AAGCATAATCGCACGGTGACCTCCGTGGCCAAGAG--CTATATAAATGCAGCTACCTAGCTGCTCAACATGCATCGAAAG
CGGGAGAGCAAGCGCAAGTAGCTAGCAACTCATCTATCC--------ATCCATCCATCTATAGACCACACCGTATTCATA
TTCACATCGGAGGTAAGCTAGCTAGCCACCACGACCATGGCCGCAGCGAAACTCGCCCTTCTCATCCTAGTCGCCGCCGC
GGTCGCCTGCACGGGCAACAGCCAGAGC------CCGGTGCAACTGTGTGACTACGAGTTTGTTGTCTCGACGTTCAATG
AAAATTGGGCGGGCACGGACTCAGATCTCACCTTCACCGTATTCAGCACGGAGGTCGTGGGCGGCGTCGCCCTGAAAACT
ATACAAAGTGCCGCTGGTTCCAGGTTCGACGTGGGCAGTA-------AGACCAAGTTCACCGTCCAGGGCGGGCCGTGCG
TGAAACCATGCGGCCTCCGCCTAGAGGTTCACAAAACCTGGTGGCTGGAGATCGGGAGCGACTGGAAGTGCCGTTCCGTC
GACTTTTTGGTAAAGCGGAACGGGGTGGTGCAGTGGCATGTGTATCTCATTTTC---AATCAGTGGGTGAC---------
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----------------------------------CGACGGCAACCCCGTCGAATA-------------------------
----------------------------------------------------------------------CAAGTCCGGG
CAGTGCCCGATCCTCTAGCATGGCGACGCC--ATGCATGATCAGGATGCGA----CGGCCGGGGTCGCGAGTGCGTGCGT
GTGTCTTGAGGGACGGTACTCGTTTGTGGCCGCGTGTGACTGTTTTGTTTAGTTTGCTTTTCTTCCGGCAGCTCCCTTGC
ATAAGCTGTATCTTGTCAT-------------------------------------------------------------
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>chr1D_1
GCCTGTCAGGCACTGGCGAGTTTATTTCGGGCGGAACTCGTCTAATGTGCTACACTACCGAGTTTCTTTCTTTCGCCGAG
TCCCTTTTTCCTGG--CACTAGGCAAACGTCGAAGTTTGGCGAGTTGCGCGTCACTGTCAAGTCCAATTATCAAGAAACT
CGGCAGACACATTACTCCGTCGAGCTCCCGATGAAGTGAACTTAGCGAAGTCATAGAACTAGGCGAAATCCCAGATTCCA
GTAGTGTGACCTCATGTCCTAGGATGACCTCAGCGCTTACATCAAGTCCTAGGATGACATCATATCTGACCTCACTGTTT
TAGACGAGCTTTAATCCTACGGATTCCAACACACTCTACATGTAATAGAAAAAAAACTCTAATATCTACTCGCTTCGTCC
GTGAACAAGTGTACATCTAGTTTTTGTCCTAAATCAAAGTTTTAAAACTTTGATCAACTTAATAGGGAAAAGTAGCAACA
TGTATGACACTAAATTAGTATCACTAGATCCTTTTTGAAATGTACTTTCGTAATATAGCAACTTGATGTCATATATGCTA
CTACTATTTTTT--ATAAAGTTGGTCAAAATTTTAAGACTTT-GACTTA--------------------AAATAGAACGT
AGAAGTGCACTTATTCATGGACGGAGGCAGTATGGGAAAGATTGAAAGAAGCAAATTCCAGCAATCACCCCATCGCAATG
TGCTCGGCGCCTCGTACTGAGCTTGTCAACTTGGTGCATAGGATTAACA------------CTAGCAAA-----------
----CTTGGTTCATGTGGTGTAGTAATGGCTAGGAACGTGATAGATGGTAAAAGTCAGCTCGGGGCGTGTAGGA-----G
AAGCATAATCGCACGGTGACCTCCCTGGCCAAGAG--CTATATAAATGCAGCTACCTAGCTGCTCAACATGCATCGAAAG
CGGGAGAGCAAGCGCAAGTAGCTAGCAACTCATCTATCC--------ATCCATCCATCTATAGACTACTCATCCTTCTCA
TCGG---------------AGCTAGCCACCACGACCATGGCCGCACCGAAACTCACCCTTCTCATCCTGGTCGCGGCCGC
GGTCGTCTGCACCGGCAACAGCCAGAGC------CAGGTGCAACTGTGTGACTACGAGTTTGTTGTCTCGACGTTCAATG
AAAATTGGGCGGGCACGGACTCAGATCTCACCTTCACTGTGTTCAGCTCGGAGGTCGTGGGCGGCGTCGCCCTGAAAACT
ATACAAAGTGCCGCTGGCTCCAGGTTCGACGTGGGCAGTA-------AGACCAAGTTCACCATCCAGGGTGGGCCGTGCG
TGAAACCATGCGGCCTCCGCCTAGAGGTTCACAAAACCTGGTGGCTGGAGATCGGGAGCGACTGGAAGTGCCGTTCCGTC
GACCTTTTGGTAAAGCGGAACGGGGCGGTGCAGTGGCATGTCTATCTCATTTTC---AATCAGTGGGTGAC---------
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----------------------------------CGACGGCTCCCCCGTCGAATA-------------------------
----------------------------------------------------------------------CAAGCCGGCG
CAGTGCCCGATCCTCTAGCACGGCGACCCCATATGCATGATCAGGACGCGACGGCCGGCCGGGGTCGCGAGTACGTGCGT
GT----TGTGGTACGGTACTCGTTTGTGGCCGCGTGTGACTGTTTAGTTTAGTTTGCTTTTCTTCCGGCAGCTCCCATGC
ATAAGCTGTACT-------------CTCCCATGCATAAGCTGTGTCTTGTCATGTGTGTCCGGTGTATGCGC--GGCTCT
CTAGCTATAGGCAGCCGGGCTCGTCGTTTGTGTTTCCATCTCTGTTGTGTTTGT----TTC-----CTTTCCTCACATTA
TTAATAAAATAAGACCCTGCCTTC--------------------------------------------------------
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>chr1A_2
-CCTGTCAGGCACCGGCGAGTTTATTTCGGGCGGAACTCCGCTAATGTGCTACACTGCCGAGTTTCTTTCTTTCGCCGAG
TCCCTTTTTCCTGG--CACTAGG-AAACGTCGAAGTTTGGCAAGTTGCGCGTCACTGTCAAGTCCAATTATCAAGAAACT
TGGCAGACACATTACTCCGTCGAGCTCCCAATGAATTGAACTCAGCGAAGCCAAAGAACTAGGCGATATCCGAGATTCCA
GTAGTGTGACCTCATGTCCTAGGATGACCTCAGCGCTTACATCAAGTCCTAGGATGACATCATATCTGACCTCACTGTTT
TAGACAAGGTTTAATCCTACGGACTCCAACACACTCTACATGTAATAGAAAAAAAACTCTAATATCTACTTGCTCCGTCC
GCGTGTAAGTGTCCATCTAGTTTTTGACCTAAATCAAAGTTTTAAAACTTTGATCAACTTTATAGAGAAAAGTAGCGGCA
TGTATGACGCTAAATTAGTATCACTAGATCCTTTTTGAAATGTACTTTCGTAATATATCAACTTGATGTCATATATGCTA
CTACTATTTTTTTTATAAAGTTGATCAAAATTTTAAGACTTGACTTAGAACAAAACGTAGAACCATCGCAAAAAAAACGT
AGAAGTGCACTTATTCACGGACGGAGGCAGTATAG--------GAAAGAAGCAAATTCCAGCAATCACCCCATCACAATG
TGCTCGGCGCCTCGTACTGAGCTTGTCAACTTGGTGCATAGGATTAACACTAGCTAGCTAGCTAGCTAG-----------
----CTAGGTTCATGTGGTGTAGTAATGGCTAGGAACGTGATAGATGGTAAAAGTCAGCTCGGGGCGTGTAGGA-----G
AAGCATAATCGCACGGTGACCTCCCTGGCAAAGAGCTCTATATAAATGCAGCTACCTAGCTGCTCAACATGCATCGAAAG
CGGGAGAGCAAGCGCAAGTAACTAGCAACTCATCTAT------------CCATCCATCTATAGACTACACCGTTTTCATA
TTCATATCGGAGGTAAGCTAGCTAGCCACCGCGGCCATGGCCGCAGCGAAACTCGCCCTTGTCATCCTAGTCGCCGCCGC
GGTCGCCTGCACCGGCAACAGCCAGAGC------CCGGTGCAACTGTGTGACTACGAGTTTGTTGTGTCGACGTTCAATG
AAAATTGGGCGGGCACGGACTCAGATCTCACCTTCACTGTGTTCAGCACGGAGGTCGTGGGCGGCGTCGCCCTGAAAACT
ATACAAAGTGCCGCTGGTTCCAGGTTCGACGTGGGCAGTA-------AGACCAAGTTCACCATCCAGGGCGGGCCGTGCG
TGAAACCATGCGGCCTCCGCCTAGAGGTTCACAAGACCTGGTGGCTGGAGATCGGGAGCGACTGGAAGTGCCGTTCCGTC
GACCTTTTGGTAAAGAGGAACGGGGCGGTGCAGTGGCATTTCTATCTCATTTTC---AATCAGTGGGTGAA---------
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----------------------------------AGACGGCTCCCCCGTCGAATA-------------------------
----------------------------------------------------------------------CAAGCCGGCG
CAGTGCCCGATCCTCTAGCACGGCGACGCC--ATGCATGATCAGGACGCGACGGCCGGCCGGGGTCGCGAGTGCGTGCGT
GT----TGAGGTACGGTACTCGTTTGTGGCCGCGTGTGACTGTTTTGTTTAGTTTGCTTTTCTTCCGGCAGCTCCCATGC
ATAAACTGTATCTTGTCATCAGCAGCTCCCATGCATAAGCTGTGTCTTGTCATGTGTGTCCGGTGTATGCGC--GGCTCT
CTAGCTATAGGCAGCCGGGCTCGTCGTTTGTGTTTTCATCAGTGTTGTGTTTGT----TTC-----CTTTCCTCACATTA
TTAATAAAATAAGACCCTGCCTTCCTGTTTAATTTATTTGTTTTCGGCTCATTGTTTGCGGTCCA---------------
---------------------------------------------------------------------TCCATGCATGA
TGACTCGTTTATTTCCCGCCGTGCATCCTTCGCCATGCATGCACATAGCCAATTTTCTGTTTGGT---------------
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>chr1B_984
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-------------------AGCTAGCCACCACGACCATGGCCGCAGCGAAGCTCGCCCTTCTCATCCTAGCTGCCCCTGC
GGTTGCCTGCACCGGCAACAGCCACAGC------CAGGTGCAACTGTGTGACTACGAGTTCGTTGTGTGGACATAAAATG
AAAATTGGGCGGGCACAGACTCAGAGCTCACGTTCACTGTGTTCAGCGCGGAGCTCGTGGGCGGCGTCACCCTGAAAACT
CTGCAATGTGCCGTTAGTTCCAGGTTCGGCATCGGCAGTA-------AGGACAAGTTCATCGTCCAGAGTGAGTCGTGCA
TGAAACCATGCGGCCTTCGCCTAGAGGTTCACAAAACCTGGTGGCTGGAGGTCGGGAGTGAGTGGAAGTGCCGTTCCATC
GACTTTTT-----------------------------------------TTTTC---AAACGGAGGTAAAAGATTTGCCT
CTTCTATTATATAAGAGAGAAGCAAAGTTTAGAGTTTTACAAAAGCA---CCCAATTACACGCCTGGCAATTACTCACGT
-AAAAAAATATTCCATAGTCTTCTAGCACTGGTGGTAATCCAAAGCTTTGCCTCCTCCAAGATGGTGCTAAGTAGGATAG
GCGGCGACACACACTTGTGACGGAACACCTTAGCATTTCGCTCATTCCAAATGGTCCAAGAGACAAGCATAGTGAGGGAG
GTCATAGC------------------------------------------------------------------------
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----------GCTCCGGTTG------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GGGATGTGATTGT----TCT-----CTTGTCCCACCATT
CACG------------------------------GATGAAATTGTTAAGGTGCCAATCTGTGATGCCCATGTGAGCAAGA
C-----CAAGCTTTTCGATGATAGTCCTCCAAAGCTGGAGGGTGTAGCGGTACTTGAAGAAGAGGTGTGTCCATGCATGA
TGAC--------------------------------ATATGTATATGTCCAGTTTGGTGTTGAGTGCGC-----------
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-----------------------------------------------ACTAATCTCATAGGTTAATTTTCATAACTATCT
GCCCGTAGATGTACTAGG-AAAGGTCGACCTTGTCCCCTCATATTGTTGGGCATTGTCTTGGTAATAAAATAGATCCTTT
CTTCTACCTCCTGCCTGCATCTCGTATGCATGGAGGGACACGTTTGTGGCTTCCCTGTTGAACAGGTAACCGGTAACACT
ATCACAACCCTTGACTTTGTATGACTTTGTTGCTTAATCAATAAATTGCCCATGTTCTAAAGATAACCTTGTTCGTGCGG
ATGGATCTCTAGATATTTTTAGATGAATAGCGCAATTTTATTTCATTGTGCAACAAAAAGAGGGATACAAAGATGCTCAG
GGAGGTC-AAAAAACCAAACATGATGCCCCACCGTAAGTGTGGCCGCCATTCTAGCTAGTCTATGAGATTCCCCATTGCT
TTC---
>chr1B_995
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------------------------------ACGACCATGGCCGCAGCGAAGCTCGCCCTTCTCATCCTAGCTGCCCCCGC
GGTCGCCTGCACCGGCAACAGCCAGAGC------CAGGTGCAACTGTGTGACTACGAGTTCGTTGTCTCGACATACAATT
AAAAATGGGCGGGCACAGACTCAGAGCTCACGTTCACTGTGTTCAGCACGGAGGTCGTGGGCGGCGTCGCCGTGAAAACT
CTGCAATGTGCCGCTGGTTCCAGGTTCGACGTCGGCAGTA-------AGGACAAGTTCATCGTCCAGAGCGGGCCGTGCG
TGAAACCATGCGGCCTCTGCCTAGAGGTTCACAAAACCTGGTGGCTGGAGGTCGGGAGCGGGTGGAAGTGCCGTTCCGTT
GACTTTTT-----------------------------------------TTTTCTCAAAACGGAGGTAAAC-ATTTGCCT
CTTCTATTAAATAAGGGAGGAGCAAATTTTAGAGTTTTATACAAGAGCACCCACA-TACATGCATGTCAATTACTCGTGC
AAAAAAAAAAATCCATAGTCTTTTAGCACTGGTGGTAGTCCAAAGCTTTGCCTCCTCCAAGATGGTGCTGAGTAGGATAG
GCGGTGACGCGCATTTGTGTTGGAACACCCTAGCATTTCGCTCATTCCAAATGGTCCAAGAGATAAGCATAGTGAGAGAG
GTCATAGC------------------------------------------------------------------------
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----------GCTCCGGTTG------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GGAATGTGATTGTCAGCTCT-----CTTATTCCACCATT
TGCG------------------------------GATGAAATTGTCAAGGTGCCAATCTGTGATGTCCATGTGAGCAAGA
CAAGACCAAGCTTTTCGATGATAGCCCTCCAAAGCCGGAGCGTGTAGCGGTACTTGAAGAAGAGGTGTGTCCATGCATGA
TGAC--------------------------------GTATGTATATATCCAGTTTGGTGTTGAGTGCGTACTCAGGTTTT
CTTACAATAGGAACCATTGGTTCCGATATTGTTCTAGTATATGTATTCAAAAGATGCTAGTACATCAAT-ACTTACACCG
GCAACACATGGAAAATTTGTGCAACGTAAGGAGGACTACGTAGGCACAATTTTCCAAACGATTCCCTTGAATATTCAGTT
CAGACGCGCGTTAGTTGGTGAGCGATGGAATGCCTGGATGCCTTGGTTCGGAGATTGATAGATGTTCAACTCTCCGACCA
ACCGGATTCGACGCATTGGAAATTAGCTAAAAATGGTGTTTTTACGGTGAAATCCTTCTATATGAATTTGATTAACTCTG
GTCCAATCTCAAGATCCTTACATATTTGGAAGATTAAATTTCCCTTGCGTATTAAATTTTTTATGTGTGGTTTGTCCACA
AGCAAGTAATACTCATCAAGGACAACTTGATCAAGCGGCGATGGGTAGGTAGTTCATGTTGTTGTTTTTGTGATCATGAT
GAAATAATACAACATTTATTTCTTGAATGCCCACTCACCAAATTGCTTTGGAGAACGATACATCCTTCAACATTCATCCT
TCAGTTGACATTGAATCTTTATTTGGAACGTGGTTAGCTGGGGTTCAACATACTACAGCGGCTCGTATTCAGATTGGAAT
ATGTGCGCTTCTGTGGGCTATATGGAACTGTAGGAATGATTTGATTTTTAACAGACAACACACTTTAACTTTCTAGCATG
TCATCTTCAAAGCTACCGCATGGATCCGTACGTGGTCCTTACTCACTCCTATGGACTCCAGGGAGCCTTTGGTTACTGGG
TGCAACCAGTGGAAGATGGTAGCACGGGCTATATTCAACCGGTTCGGATAATGGTCGCATAACAGGATAGGAGTCTAGGG
AGCTTATCTTTCATACTGTCGTACCGGTGCTGATCGTCAGCATGTATTTCTCTTTTATTTTTTTGCTTCGCTCCGCTTGT
GAGCTGTAACACTTTCAAGACTTTGTGATACTTCGTGGATTGTTTAATAAGATGGCTGCATGCATCATCATGATGCAGAG
GCCGGGGGCACGCCTCCATTTCCAAAAAAAATGGAAAACGTGTGCGAGCATCGTTTGTTTTCAAGGAAACAAAAATG--G
AC--CCTCTTCTAAAAATCTTGCACCTTCGAAAGATACTTAGGGTTTAGGGGTTTAGACTTAATTCATTAATCTGTCACC
CCCTGAATTTTGTGGTGGGCTACATCCCCTCTAATCAGATTTCGCCAACTAATCTCATAGGTTAATTTTCATAACTATCT
GCCCGTAGATG---TAGC-AAAGGTCGACCTTGTCCCGTCATATTGTTGGGCATTGTCTTGGTAATAAAATAGATCCTTT
CTTCTACCTCCTGCCTGCATCTCGTACGCATGGAGGGACACGTTTGTGGCTTCCCTGTTGAACACGTAATCGGTAACACT
ATCACAAGCCTTGACTTTGTATAACTTTGTTGCTTAATCAATAAATCACCAATGTTCTAAAGATAACCTTGTACGTGCGG
ATGGATCTCTAGATATTTTTAGATGAATAGCGCAACTTTAATTCATTGTGCAACAAAAAGAGGGATACAAAGATTCTCAC
GGAGGTC-AAAAAACCAAACATGATGCCCCACCGTAAGTGTGGCCGCCATTCTAGCTAGTCTATGAGATTCCCCATTGCT
TTC---
>chr1D_995
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------------------------------ACGACCATGGCCGCAGCGAAGCTCGCGCTTCTCATCCTAGCTGCCGCCGC
GGTCGCCTGCACCGGCAACAGCCAGAGC------CAGGTGCAACTGTGTGACTACGAGTTCGTTGTCTGGACATGCAATG
AAAATTGGGCGGGCAGAGGCTCAGACCTCACGTTCCCTGTGTTCAGCGCGGAGGTCGTGGGCGGCGTCGCCCTGAAAACT
CTGCAACGTGCCGCTGGTTCCAGGTTCGACGTCGGCACTCGGCAGTTAGGACAAGTTCATCGTCCAGAGCGGGCCGTGCG
TGAAACCATGCGGCCTCCGCCTAGAGGTTCACAAAACCTGGTGGCTAGAGGTCGGGAGCGAGTGGAAGTGCCGTTCCGTC
GACTTTTT-----------------------------------------TTTCGAACT----------------------
----TATTAAATAAGGGAGAAGCAAAGTTTAGAGTTTTACAAAAGCA---CCACA-TACACGCATGGCAATTACTCACGC
AAAAAAAATAATTCACAGTCTTTTGGCACTGGTGGTAATCCAAAGCTTTGCCTCCTCCAAGATGGTGCTAAGTAGGATAG
GCGGCGATGCGCACTTGTGACGGAACATCCTAGCATTTCGCTCATTCTAAATGGTCCAAGAGATAAGTATAGTGAGGGAG
GTCATAATGCTCCGATTCTTTTTTTTTTAAAAGGAGGATGACCCCCGGCCTCTGCATCTGGGCGATGCATACGGCCACTT
TATTAATTATACTCACAAGACCTTACAAAGTCATATAACAGTAAGACTAAAGCCGTCGTCTAAGCAACAAACTGTCGCTA
CACCTATCCAGTTGATGAAGGGGCGCAGATAGCCTGAGCCTAATACCAAACAGACATCGCAGCCAAGCCTAACATCTAAG
ACCTGAGACCCCAACCTAGCCACTTGCCGGGTCTGGGGCACACACTGGTCCGGCGTGCTCTCAGAGACCGCCGCCGCCAA
CTGCCACCGCTCCATCTTCAAAACTGTACTGATGCATCAACCTTGCTCGGTCCAGCTATCGTCGACGCCACCACGGCGCC
CAACGACACCTCTTCCCTGCGCGCAAACAGCTGAACACGTCGCGGTCGCCACTGATACACCTCAGCGCCTTGCTGCCAAG
TACCACCAGCCGACACAGCTTGAAGTCCTTGGAGGATCTGTCGTGCGTAGCACCTGCCGACCAGGCATGACAAAGCGTAG
CACCTGTCGGTCAGGCATGACTTGACATCTCCACCGAAACTCCGTGCAAGACGAAGCCGCTCCACCTCCTGCCTCTAACT
TCCAGCGCTGCTCCACAAACGATGCTCCCAAGAGAGAAACGACACCGCAGTGCCACCATCGTCCGATCTGGAACACCAGA
TCCTAGGGTTTCCCCCGGAGCAGCACGAGTGGGTCGACAGTAGTTACACGACGATGCCTTCATCAAGGTAACGGCGTAGT
ACGCCGCCATCGCCTGCCGTCGGCTCGGTTTTCACCGGCAACCATGTCTCCCCAACTCGCAGCCGGGACTAGATGATGGA
TTTCGAGATCACCAAGCTTCTGGCCGGCCACCGCCGACGAAGAAGATGACCACCACCACTGGCTACACCGGTCAGAACAG
ATCTGCCATGGGTGCCGCCAAGCAGTCCACCAGGCCCTCGACGCCGCCGCCGATCTAAAGCCAGATGGCATGCTGCCGAA
GACCGCATCGCGCCGCCGCCCGATCTAGGCCAGCCGCCGCAACAGCCGCCCGATCTAGGCCAGCCGCCGCCGCAGCCGCC
CGTGGCCCGAGGCAGGGTCGACCGCCGCCGCCGTCGAAGCCAACGCCGTCGCTTCTAGATCGGCCGCACGTCCACGCATG
TTGGGGCCCCGCCACCCCTGAGACGCGGGAGGGAGGAAGAGCCCCCGCCACCGCCGTCGGCCTCCGGGCGCAAGCCGGCG
----------------------------------GCGTCCTCCGGCGGCGGCGGGAGGAGGGGAGGAAGATGGGCTAGGC
CCCGGCGGCGGCTAGGGTTG------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GGGAGCCACCCGAGTCGCCCGAGCGGGGGGACGACGCGG
GGGCCTCCGACTGTATTTTCGGTTGGCTGCCGCAGATGAAATTGTCAAGGTACCAACCTGTGATGTCCATGTGAG-----
CAAGACCAAGTTTTCCGATGATAGTCCTCTAA------AGCGTGTAGCGGCACTTGAAGAAGAGGTGT--CCATGCATGA
TGAC--------------------------------GTATGTACATATCCAGTTTGGTGTTGAGTGCGTACTCAGGTTTT
CTTATAATGGGAACCACTGGTTCTGATATTTTTCTAGTATATGTATTCAAAAGATGCCAGCACATCAAATACTTACACCG
GCAACAC-------------------------------------------------------------------------
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------------------------------ATGGAAAACTTGTACGAGCATCGTTTGTTTTCAAGGAAACAAAAATG--G
AGATCCTCTTCTAAAAATCCTGCACCTTCGAAAGATACTTAGGG--------TTTAGACTTAATTAATTAATCTGTCGCC
CCCTGAATTTCAGGGTGGGCTCCATCCCCTCTAATCAGATTTCGCCAACTAATCTCATAGGTTAATTTTCATAACTATCT
GCCCGTAGATG---TAGC-AAAGGTCGACCTTGTCCC-TCATATTGTTGGGCATTCTCTTGGTAATAAAATGGATCATTT
CTTCTACCTCCTGCCTGCATCTCGTACGCATGGAGGGACACGTTTGTGGCTTCCCTGTTGAACACGTAACCGGTAACACT
ATCATAACCCTTGACTTTGTATGACTTTGTCGCTTAATCAATAAATTGCCCATGTTCTAAAGATAACCTTGTTCGTGCGG
ATGGATCTCTAAATATTTTTAGATGAATAGCGCAACTTTATTTCATTGTGCAACAAAAAGAGGGATACAAAGATGCTCAG
GGAGGTAAAAAAAACCAAACATGATGCCCCACCGTAAGTGTGGCTGCCATTCTAGCTAGTCTATGAGATTCCCCATTGCT
TTCACG
>SNPs
-----------------------------S-----------------------------S-----------------S--
----------S---SS-----------------------------S--S--S----------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
------------S-----------------------------S-------------------------------------
----S---------------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------SSSSS-
-----------------------------------------------S--------------------------------
--------------------------------------SSSSSSSSS---------------------------------
--------------------------------------------------------------------------------
----------------------------SSSSSS-----------------------------------S----------
-------------------------------S------------------------------------------------
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------S-------------------------------------------------------------------------
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-------------------------S------------------------------------------------------
----------------------------------S--------------------------------------------S
-----S---S---------SS-S-SS-S-SS-----------------------------------S--S-SSS----S-
---S------------------S----S-SSS---------S------S------------SSSSS--------------
--------------S---------S-SS--SS-S-SS--S-SSS------------------------------------
--------------------------------------------------------------------------------
-S----S-S---------S----------SS---S---------------------S--------SSSSSSS-SS-SSSS
SSSSSSS-SS-SSSSS-SS------------------------S--S-S----S-S----------------------SS
S-----S-------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------------SS-
-----------S----S-----------S-S-------------------------------------------------
-------------------------------------S----S--------------------S------S---------
------------------S-------------------------------------------------------------
-------------SS---S--------S---S-------S---------S------S----S---S------S-------
------------S----------------------------S--------------------------------------
--------SS---------------------------------------S----S--------------------SS---
----------------------------------S--------S--------------------SS--------------
------
>forward_126
--------------------------------------------------------------------------------
--------------------------ACGTCGAAGTTTGGCGAGTA----------------------------------
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>reverse_3230
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-----------------------------GTGTCCGGTGTGTGTGTTTG-------------------------------
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------
