>input_sequence_79237
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----------------------------------------------------------------------ATGAGGA---
---TAGGGAACAGAACAGAGTCTTGCTGCAATATGGACCACCGACAAGGCAGGGATGACCATGTAAGTACATTGATCGCT
TTCTTTCTTTTCTAAATTGCTGTCT--ATCATGTTTGTATATATGATG---GGTGGTTAACATGCATAA------CATGG
GTGCAGGAAGGGGTGCAAGTTGTTGGATTCGAAGTCCCATCATCACCAGACTCAAGCTACAGCAACCCTATTCCCGGAAA
CGAAGACGAAGCTCGAGAGCCCCCATTGGTTCCTCCTCACCTGCAGCACACACTGCTGAGCTTCCCGCCAAGCCATGACG
ACGGGAGCAGCCTCCCTCTGCCGCAGCCTGTGGTGCTCAACCACCTCTACATAGAGAAGGAGAACTCAAGATCTGTGGTC
GCCCTGGGGATCACCCACCGGTTCAAGGCCAAGTATGTGACCGTCGTGCTCTACAAGCCGGTACAGAGGCGGTAG-----
--------------------------------------------------------------------------------
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----------------------------------------------------
>chr1A_1_TraesCS1A01G004200
GCTTTGACATGAAGAAGCAGCAGCCAAACCACGCGCTGATGCTACCAATCTGGTGGTCTGTTCTGATCCAACAGGCCTAA
GTACCTGCTACACTACAGTATGGGGAAATTGGGAGGCCAAATGAGCACAAATGTTCAGGCTGTATGGAGAGGCGGGATGT
ACCT-----------------------------GTGA-TTTGCTATTAAGAAATGGACAATGCAACACAACCTGATGTAG
TATATGCAAG-GAAGATATTGATTCATTGTCTGCAGAACCAGATCAGAGTGAAAACAATCGAAGCAACTTTGGCTTTCTT
ACCAACAAAATAAACTGGTTATGGC---GATCTCTTTGTCATGCTAATCCAGTAAAGTGTAGGAGGAAAAGAGTTTGCTA
AGGCAGCATGCTA-GGTGGAAATTAGGAGTTTTCTTGAGTTTATATCTGAATGTATAATATCGTTAAGAGTGAGTTCCTA
ACCGTTTATTGTTGTTAATAATTTTGCAGCAACAAAG---------------TTGCCTTGTTTCGTTTTCTG----CTTG
CATTGATTCCGTTGTAGTTGCAACTATTTACCTCGGGCAGAGTTACTCTGTTTGAATTCATTTTTGTAGTTGAAACTTTT
GCCACTTTGCCAG--TATAATCAATCGTACCCTTCGTAAGTACAG-------------GGAAACTATTGGATTCCTGTGT
TACACTGAAATCGGTTAGCAACTTAGCATACAAGC---------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------ATGCTCTCTCACTCTCTGTTGGAGCAGAGCA
GTTTGAATACAAATCTACTTGCTGGGAAAATTCCATTGATTAAATGTGTAATTAGTTTACTGCTAGATTTTGTTTTCTAT
GGTGTCTCAGATCGATTTGGTTCATGCAAAAACCAGAAGTTTCTTTTGCATGTAGTGCATGATAGAAATACATAATGTGC
AAATTATATTCAATGAATGATTCTTTTATGTGATTTAGAGTTATTATCTGTGATATTTATGTCAGCTCTTG--ATT----
-----------------TA----GTTACTAAAATTCATTACTCACGTCAGCATTTTTCATATACTTGTTTATGAGGA---
---TAGGGAACAGAACAGAGTCTTGCTGCAATATGGACCACCGACAAGGCAGGGATGACCATGTAAGTACATTGATCGCT
TTCTTTCTTTTCTAAATTGCTGTCT--ATCATGTTTGTATATATGATG---GGTGGTTAACATGCATAA------CATGG
GTGCAGGAAGGGGTGCAAGTTGTTGGATTCGAAGTCCCATCATCACCAGACTCAAGCTACAGCAACCCTATTCCCGGAAA
CGAAGACGAAGCTCGAGAGCCCCCATTGGTTCCTCCTCACCTGCAGCACACACTGCTGAGCTTCCCGCCAAGCCATGACG
ACGGGAGCAGCCTCCCTCTGCCGCAGCCTGTGGTGCTCAACCACCTCTACATAGAGAAGGAGAACTCAAGATCTGTGGTC
GCCCTGGGGATCACCCACCGGTTCAAGGCCAAGTATGTGACCGTCGTGCTCTACAAGCCGGTACAGAGGCGGTAGTGTGG
CGGCAAACATCTCTGAGGGTTTCTTCCCATTGGGGTTGTGGCGACCTACCAAACCGGATGGAATGTGTCTGTTGTAGTCC
TGGAGAAATAGAGATGCCCTTCATTTTCG-ATGATTTGGTCATGTACTTAATTGACTGTGACTGCTGGTCGTGATGATGA
AGATGG---TCGTCTAGTCTGATGTTTGTGCGTCTTTGGACTCAACTTGTTGGTGACAAATGTTGAACAGTGTGGTCTGT
GTCCGAAACCCTCGTAGCGAATCGACGAGGCTTGATCATG-AAATCGGACAATACCACCGTGAGTCGAGCTAATAAAAGT
GAGTGTTTGGTCATGTTAAGAAACTGAGAATCTGTTTAGTTTATGCAGGCAGTGGTATGCTAGTTCAGATTGTAGTTTAA
AAATTGGCGACGCTATCAAGTTGCTTTTGTTTGTACATCTTCAGTAAAATTGTGTTGTAGTCTAAAACTACATTCTAACT
ATTACAGATAGGACGAATTGGAGGTATTAGTAAAAA-----------GCAGACAGTGGGCACATTTTTTGAAAGATTTGA
ATTTTGTACTTTCTTAAATTTCAAAATTCTGATTTTTTTTCC-ACATGTAAGTATACTTGTGCTCTGTGTGTGTGAAATT
TCAGGAACGTTGTTGAAATAACTTCTTTACCTCCCGTAAAATCCTTTATGCCTGATTTCAGTACTAATAATAAATGGCTA
AAAACATCCTATTCTATAATTAGCTTTTCGGGAAATTTCCAAACGAACAATTTCAACGAAATTTTTCAGTTTCTCATTTT
ATTCCCCGCTGCCAGGCTCAAACCAGAGACAGATCCAATTTCCGTTTTTCTAGAATAAAAAAAGGAAAAATTGGGTCTAT
GTTCAACGGAAAAAAAATTCTCAAGAGCAAAAGGGCTGACCACTACGTAGGAGCGCTGGAAGCCAAGCCGTCAAAAGGAA
AGGCGAGCAGCCCTTATTGCAATAGCAAACGACCTACTTATAACCCTATTTA
>chr1B_1
GCTTTGACAT---GAAGCAGCAGCCAAACCATGCGCTCGTGCTATCAATCTAGTGCTCTGTTCTGATCCAACAGGCCTAA
GTACCTGCTACACTACAGTATGGGGAAATTGGGAGACCAAATGAGCACAAATGTTCAGGCTGTGTGGAGAGGCGGGATGT
ACCTTGATTTCCATCGCACGTTAAATTTTACCAGTGATTTTTTTATTAAGAAATGGACAATTCAACACAACCTGATGTAG
TATAGGCAAG-GAAGATATTAATTCATTGTTTGCAGAACCAGATCAGAGTGAAAACAATCAAAGCAACTTTGGCTTTCTT
ACCAACAAAATAAACCGGCTATGACG--GATCTCTTTGTCATGCTAATCCAGTGAAGTATAGGAGGAAAAGAGTTTGATA
AGGCAGCATGCTGCGGTGGAAATTAGGAGTTTTCTTTAGTTTATATCTGAATGTATAATATCGTTAAGAGTGAGTTCCTA
ACCGTTTATTATTGTTAATAATTTTGCAGAAACAAAG---------------TTGTCTTGTTTCATTTTCTG----CCTG
CATTGACTACGTTGTAGTTCCAACTATTTACCTTGGGCCGAGTTACTCCGTTTGAATTCATTTTTGTAGTTGAAACCTTT
GCCACTTTGCCAG--TATAATCAATTGTACCCTTCGTAAGTACAGAGCAGTTTTGAAGCGAAACTATTGGATTCCTGTTT
TACACTGAAATCGGTTAGCAACTTAGCATACCAGC---------------------------------------------
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-------------------------------------------------ATGCTCTCCCACTCTCTGTTGGAGCAGAGCA
GTTTGAATACAAATCTACTTACTGGGAAAATTCCATTGATTAAATGTGTAATTAGTTTACTGCTAGATTTTGTTTTCTAT
GGTGACTCAGATCGATTTAGTTCATGCAAAAATCAGAAGTTTCTTCTGCATGTAGTGCATTATAGAAATACATAATGTGC
AAATTTCATTCAATGAATGATTCTTGTATGCGATTTAGAGTCATTATCTGTGATATTTATTTCAGCTCTTG--ATT----
-----------------TATTTAGTTACTAAAATTCATTACTCACGTCAACATTTTTCATATACTCGTTTATGAGGA---
---TAGGCAACAGAACAGAGTCTTGCTGCAATATGGACCACCGACAAGGCAGGGATGACCATGTAAGTACATTGATCGCT
TTCTTTCTTTTCTAAACTGCTGTCTCTATCATGTTTGTACAT---ATGATGGGTGGTTAACATACATAACTTGGGTATGG
GTGCAGGAAGGGGTGCAAGTTGTTGGATTCGAAGTCCCATCATCACCAGACTCAAGCTACAGCAACCCTATCCCTGGAAA
CGAAGACGAAGCTCGAGAGCCCCCATTGGTTCCTCCTCACCTGCAGCATACACTGCTGAGCTTCCCGCCGAGCCATGACG
ATGGGAGCAGCCTCCCTCTGCCCCAACCCGTGGTGCTCAACCACCTCTACATAGAGAAGGAGAACTCGAGATCCGTGGTT
GCCCTGGGGATCACCCACCGTTTCAAGGCCAAGTATGTGACCGTCGTGCTCTACAAGCCGGTACAGAGGCGGTAGCGTGG
TGGCGAACATCTATGAGGGTTTCTTCCCATTGGGGTTGTGGCGACCTACCAAACCGGATGGAATGTGTCTGTTGTAGTCC
TGGAGAAATAGAGATGCCCTTCATTCTCAAATGATTTGGTCATGTACTTAATTGACTGTGACTGCTGGTCGTGATGATGA
AGATGG---TCGTCTAGTCTGATGTTTGTGCGTCTTTGGACTCAACTTGTTGGTGACAAATGTTGAACAGTGTGGTCTGT
GTCCGAAACCCTCATAGCGAATCGACGAGGCTTGATCATGAAAATCGGACAATACCACCGTGAGTCGAGCTAATAAAATT
GAGTGTTTGGTCATGTTAAGAAACTGAGAATCTGTTTAGTTTATGCAGGCAATGGTATGCTAGTTCAGATTGTAGTTCAA
AAATTTGCGACGCTATCAAGTTGCTTTTGTTTGTACATCTTCAGTAAAACTGTGTTGGAGTCTAAAGCTACATTCTAACT
ATTACAGATAGGCTGAATTAGAGGTATTAGTAAAAA-AGAACATCAAGCGGATTGTGGACATATTTTTTGAAAAAATTGA
ATTTTGTACTTTCTTAAATTTCAAAATTCTGATTTTT----C-ACATGTAAGTATACGTGTGCTCTCTGTGTGTGAAATG
TCATGAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr1D_1
GCTTTGACAT---GAAGCAGCAGCCAAACCTCGTGCTGATGCTACCAATCTGGTGGTCTGTTCTGATCCAACAGGCCTAA
GTACGTGCTACACTACAGTATGGGGAAATTGGGAGGCCAAATGAGCACAAACGTTCAGGCTGCATGGAGAGGCGGGATGT
ACCTTGATTTCCATAGCATGCTACATTTTAACAGTGA-TTTTTTATCAAGATATGGACAGTTCAACACAACCTGATCTAG
TATAGGCAAG-GAAGATATTGATTCATTGTTTGCAGAACCAGATCAGAGTGAAAACAATCAAAGCAACTTTGGCTTTCTT
ACCAACAAAATAAACCGGTTATGG--GAGATCTCTTTGTCATGCTAATCCAGTAAAGTATAGGAGGAAAAGAGTTTGATA
AGGTAGCATGCTACGGTGGAAATTAGGAGTTTTCTTTAGTTTATATCTGAATGTATTA----GTTAAGAGTGAGTTCCTA
ACAGTTTATTATTGTTAATAATTTTCCAGCAACAAAG---------------TTGTCTTGTTTCATTTTCTG----CTTG
CATTCACTCCGTTGTAGTTGCAACTATTTACCTTGGGCCGAGTTAATCTGTTTGAATTCATTTTTGTAGTTGAAACCTTT
GCCACTTTACCAGTATATAATCAATCGTACCCTTCGTAAGTACAGAGCAGTTTT-AAGGGAAACTATTGGATTCCTGTGT
TACACTGAAATCGGTTAGCAACTTAGCATACCAGC---------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------ATGCTCTCCCACTCTCTGTCGGAGCAGAGCA
GTTTGAAAACAAATCTACTTACTGGGAAAATTCCATTGGTTAAATGTGTAATTAGTTTACTGCTAGATTTTGTTTCCTAT
GGTGTGAAAGATCGATTTGGTTCATGCAAAAATCAGAAGTTTCTTTTGCATGTAGTGCATGATAGAAATACATTATGTGC
AAATTTCATTCAATGAATGATTCTTATATGCGATTTAGAGTTATTATCTGTGATATTTATGTCAGCTCTTG--ATT----
-----------------TA----GTTTCTAAAATTCATTACTCACGTCAACATTTTTCATATACTCGTTTATGAGGA---
---TAGGCAACAGAACAGAGTCTTGCTGCAATATGGACCACCGACAAGGCAGGGATGACCATGTAAGTAGTTTGGTCG--
--CTTTCTTTCCTAAGCTGCTGTCTCTATCATGTTTGTATAT---ATGATGGGTGGTTAACATATATAA------CATGG
GTGCAGGAAGGGGTGCAAGTTGTTGGATTCGAAGTCCCATCGTCACCAGACTCAAGCTACAGCAACCCTATCCCTGGAAA
CGAAGACGAAGCTCGAGAGCCCCCATTGGTTCCTCCTCACCTGCAGCACACACTGCTGAGCTTCCCGCCGAGCCATGACG
ACGGGAGCAGCCTCCCTCTGCCGCAGCCCGTGGTGCTCAACCACCTCTACATAGAGAAGGAGAACTCGAGATCCGTGGTC
GCCCTGGGGATCACCCACCGGTTCAAGGCCAAGTATGTGACCGTCGTGCTCTACAAGCCGGTACAGAGGCGGTAGTGTGG
CGGCGAACATCTATGAGGGTTACTTCCCATTGGGGTTGTGGCGACCTACCAAACCGGATGGAATGTGTCTGTTGTAGTCC
TGGAGAAATAGAGATGCCCTTCATTCTCAAATGATTTGGTCATGTGCTTAATTGACTGTGACTGCTGGTCGTGATGATGA
AGATGGTCGTCGTCTAGTCTGATGTTTGTGCGTCTTTGGACTCAACTTGTTGGTGACAAATGTTGAACAGTGTGGTGCGT
GTCCGAAACCCTCATAGCGAATCGACGAGGCTTGATCATG-AAACCGGACAATAGCACCGTGAGTTGAGCTAATAAAAGT
GAGTGTTTGGTCATGTTAAGAAACTGAGAATCTGTTTAGTTTATGCAGGCAGTGGTATGCTAGTTCAGATTGTACCTCAA
AAATTTGCGACGCTATCAAGTTGCTTTTGTTTGTATATCTTCAGTAAAATTGCGTTGGAGTCTCAAAATACATTCTAACT
ACTACAGATAGGCTGAATTAGAGGTATTAGTAAAAAAAGAACATCAAGCAGAC--TGGGCATATTTTTTGAAAAAATTGA
ATTTCGTACTTTCTTAAATTTCAAAATTCTGATTTTT----CCACATGTAAGTATACGTGTGCTCTGTGTGTGTGAAATT
TCATGAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr6B_155
GGAGTACCGGTGATC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TTTTTTATTAGGAAATGGACAATTCAACACAGATGGATGTAG
TATTATGCAATGAAGATATCGATTCATTGTTTGCAGAACCAGATCAGAGCAAAAATATTCATAGCAAGTTTGGCTTTCTT
ACCAACAAAATAAATAGGTTATGGTAGATATCTCTATGCCATGCTAAGCCAGT-AAGGATAGGAGGAAAAGAGTTTGATA
AGGCGGCATGCCACTGTGGAAGTTAGGGGTTTTC-TTAGTTTATATCTGAATGAATAATATCGTTAAGAGTGAGTTTTAA
CAGT----TTATTGTTAATTATTTTTGCTGCAACAATAATCAAGTTGCCTTCTTGTATTGTTTCATTTTCTGTTGACTTG
CATTGATTCCGTTGTAGTTGCAACTATTTACCTCAGGCCGAGCTACTCTGTTTGAAATCATTTATGTAGTTGAGATCTTT
GCCACTTTGTCAG--TATAATCATTTGT----------------------------------------------------
TATACTGAAATCGT--------TTAGCATACCGTC---------------------------------------------
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-------------------------------------------------ATGCTCTCTCACTCTCTGTTGGAGCAGAGCA
GTTTGATAACAAATCTACTTGCTGGGAAAATTCCGTCGGTTAAATGTGTAATTACTTTACTGCTAGCTTTTGTTTTCTAT
GGTATCTCATATCCATTTGGTTCATGCAAAAATCAACAGTTTCTTTTGCATGTAGTGCATGATACAAATACAAAATATGC
AAACTTCGTTCAGTGAATGATTCTTATATGTGATTTATAGTTGTTATCTGTAAG--TTACGACAGCTCTTGTTTTTTTTT
CAACTTGCACTGCACACAA----GCTACTAAAATTAATTACTCACGCCAACGTTTTTCATATACTCGTTTATGAGGA---
---TAGGCAACAGAACAGAGTCTTGCAGCAATATGGAGCACCGACAAGGCAGGGATGACCATGTAAGTACATTGACCGCT
TTCTTTCTTTTCTAAACTGCTGTCTCTATCATGTTTGTATTTATGATGATGGGTGGTTAACATACATAA------TATGG
GTGCAGGAAGGGGTGCAGGTTGTTGGATTTGAAGTCCCATCATCACCAGACTCAAGCTACAGCAACCCTATCCCTGGAAA
CAAAGACGAAGCTCGAGAGCCCCCATTGGTTCCTCCTCACCTACAGCATATACTGCTGAGCTTCCCGCCGAGCCATGACG
ACGGGAGAAGCCTCCATCTGCC----------------------------------------------------------
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----------------------------------------------------
>chr3D_174
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-------------------------------------------TATTAGGAAATGGACAGTTCAACACAGATGGATGTAG
TATTATACAATGAAGATATCGATTCGTTGTTTGCAGAACCAGATCAGAGC-AAAATATTCATAGCAAGTTCGGCTTTCTT
ACCAACAAAATAAATAGGTTATGGTAGATATCTCTATGCCATGCTAAGCCAGT-AAGGATAGGAGGAATAGAGTTTGATA
AGGCGGCATGCCACTGTGGAAGTTAGGAGTTTTC-TTAGTTTATATCCGAATGAATAATATCGTTAAGAGTGAGTTTTAA
CAGT----TTATTGTTAATTATTTTCGCTGCAACAATAATCAAGTTGTCTTCTTGTCTTGTTTCATTTTCTGTTGACTTG
CATTGATTCCGTTGTAGTTGCAACTATTTACCTCAGGACGAGCTACT-TGTTTGAAATCATTTATGTAGTTGAGATCTTT
GCCACTTTGTCAG--TATAATCATTTGT----------------------------------------------------
TATACTGAAATCGT--------TTAGCATACCATCATGCTTGAAGGAAATATGCCCTAGAGGCAATAATAAAGTTATTGT
TTATTTCCTCATATCATGATAAATGTTTATTATTCATGCTAGAATTGTATTAACTGGAAACATAATACATGTGTGAATAC
ATAGACAAACATAGTGTCACTAGTATGCCTCTACTTGACTAGCTCGTTAATCAAAGATGGTTGAGTTTCCTAACCATAGA
CATGAGTTGTCATTTGATTAACGGGATCACATCATTAGGAGAATGATGTGATTGACTTGACCCATTCCGTTAGCTTAGCA
CCTGATCGTTTAGTTTACTGCTATTGCTTTCTTCATGACTTATACATGTTCCTATGACTATGAGATTATGCAACTTCCGA
TTACCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTGACTGGGTGATTATAAAGGTGCTCTACAGGTGTCTCAG
ATGGTACTTGTTGAGTTGGCATAGATCGAGATTAGGATTTGTCACTCCGATTGTCTGAGAGGTATCTCTGGGCCCTCTCG
GTAATGCACATCACTATAAGCCTTGCAAGCAATGTGACTAATGAGTTAGTTGCGGGATGATGCATTACGGAACGAGTAAA
GAGACTTGCCGGTAACGAGATTGAGCTAGGTATTGAGATACCGACGATTGAATCTCGGGCAAGTAACATACCGATGACAA
AGGGAACAACGTATGTTGTTATGCGGTTTGACCGATAAAGATCTTCGTAGAATATGTAGGAGCCAATATGAGCATCCAGG
TTCCGCTATTGGTTATTGACCGGAGACATGTCTCGGTCATGTCTACATAGTTCTCGAACCCGTAGGGTCCGCACGCTTAA
AGTTCTGTGACGATCGGTATTATGAGTTTTTGTGTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATATGATCACGGA
CATGACGGGGAGTCTCGAAATGATCGAGACGTAAAGATCGATATATTGGACGACTATGTTCGGACACCGGAAGTGTTTCG
GGAGGTTTCGGACATATACCGGAGTACCGGGGGTTACCGGAAACCCCCCGGGGAGTATATTGGGCCTAATGGGCCTTAGT
GGGAGAAGAGGAGGGGCGGCCAGGGCAGCCGCGCACCCCCTCCCCTCTAGTCCGAATTGGACAAGGAGGGGCGGCGGCGC
CCCCCTTTTACCTTCTCTTCCTCTCTCCCTTCCTTCCCTTCTCCTTCTCCTACTAGGAAAGGAGGAGTCCTACTCCCGGT
GGGAGTAGGACTCCCCCCCTTGGTGAGCCCTCCTCCTGGCCGGCCGCCTCTCCCCTAGCTCCTTTATATACGGGGGCAAG
GGGGCACCCCATAGAGACAACAATTGATCATTGATCTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCACCATAATCCACCTCGGTCATATCATAGCGGTGCTTAGGCGAAGCCCTATGACGGTAGCTTCATCAACA
TCATCACCACGCCGTCGTGTTGACGAAACTCTCCCTCGAGCTCTATTGGATCGTGAGTTCGCGGGACGTCACTGAGCTGA
ACGTGTGCTGAACGTGGAGGTGCCGTACGTTCGGTACTGAGGATCGGTCGATCGTGAAGACGTACGACTACATCAACCGC
GTTGTCATAACGCTTCCGCTTAACGGTCTACGAGGGTACGTGATCGACACTCTCCCCTCTCGTTGCTATACATCACCATG
ATCTTGCGTGTGCGTAGGAATTTTTTTGAAATTACTACGTTCCCCAACAATGCTCTCTCACTCTCTGTTGTAGCAGAGCA
GTTTGATAACAAATCTACTTGCTGGGAAAATTCCATCGGTTAAATGTGTAATTAGTTTACTGCTAGCTTTTGTTTTCTAT
GGTATCTCATATCCATTTGGTTCATGCAAAAATCAACAGTTTCTTTTGCATGCAGTGCATGATAGAGATACAAAATATGC
ATACTTCGTTCAGTGAATGATTGTTATATGTGATTTATAGTTGTTATCTGTAAG--TTACGACAGCTCTTG--TTTTTTT
CAACTTGCACTGCACACAA----GCTACTAAAATTAATTACTCACGCCAACGTTTTTCATATACTCGTTTATGAGGATCA
GGATAGGCAACAGAACAGAGTCTTGCAGCAATATGGAGCACCGACAAGGTAGGGATGACCATGTAAGTACATTAACCGCT
TTCTTTCTTTTCTAAACTGCTGTCTCTATCATGTTTGTATTTATGATGATCGGTGGTTAACATACATAA------TATGG
GTGTAGGAAGGGGTGCAGGTTGTTGGATTTGAAGTCCCATCATCACCAGACTCAAGCTACAGCTACCCTATCCCTGGAAA
CAAAGACGAAGCTCGAGAGCCCCCATTGGTTTCTCCTCACCTGCAGCATATACTGCTGAGCTTCCCACCAAGCCATGACG
ATGGGAGAAGCCTCCCTCTGCC----------------------------------------------------------
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----------------------------------------------------
>chr1D_674
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----------------------TTAGCATACCATC---------------------------------------------
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-------------------------------------------------ATGCTCTCTCACTCTCTGTTTTAGCAGAGCA
GTTTGATAACAAATCGAATTGCTGGGAAAATTCCATCGATTAAATGTGTAATTAGTTTACTGCTAGATTTTGTTTTCTGT
GGTGTCTCAGATCCATTTGGTTCATGCAAAAATCAACAGTTTCTTTTGCATGTAGTGCATGATAGAAATACAAAATATGC
AAACTTCGCTCAGTCGATGATTCTTATATGCGATTTATAGTTCTTATCTGTAAG--TTACGACAGCTCTTG--ATTTTTA
TA----GCACTGCACACTA----GTTACTAAAATTAATTACTCATGCCAACGTTTTTCATATACTCGTTTATGAGGA---
---TAGGCA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GCCCCCATTGGTTCCTCCTCACCAACAGCATACACTACTGAGCTTCCCGCCGAGCCATGAA-
ACGGGAGCAGCCTCCCTCTGCCGCAGCCCGTTGTGCTCAACCACCTCTACATAGAGAAGGAGAACTCAAGATCCGTGGTC
GCCCTAGGGATCATCCACCGGTTCAAGGCCAAGTATGTGACTGTCGTGCTCTACAAGCCGGTA-----------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>SNPs
----------SS--------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------SS------------------S------------------
----S-------------------------S-----------------------------S-------------------
---------------S------------------------------------------S------------------S--
------------------------------------S-------------------------------------------
----------S--------------------------------------------S--------S---------------
--------------------------------------S-------------------------------------S---
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
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--------------------------------S-----------------------------------------------
-----SS------------------S------------------------------------------------------
-------------------------------------------------S---------------S--------------
-------S------------------------------------------------------------------------
----------------S----------------------------------------------S----------------
-----------------------------------------------------------------------S--S-----
--------------------------------------------------------------------------------
----------------------------S--------------------------------------------S------
--------------------------------------------------------------------------------
----S-------S-------------------------------------------------------------------
-------------------------S--S---------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-----S---------------------------------------------------S----------------------
------------SS-----S---------------------------------S-------S-----------S-S----
-------------------------------------SSSS----------------S----------------------
---S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_599
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------TGCAACTATTTACCTCGGGCA-----------------------------------------
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----------------------------------------------------
>reverse_4523
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------------------------------------------CTACGTAGGAGCGCTGGAAG------------------
----------------------------------------------------
