>input_sequence_79231
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CGCAGCAAGGCAG
CATATAAGAT-----------GTGTCACCTTCCATTCACCTCACCTCATCTCACCTAGCTAGCAACAGAGACCAAATCTC
TGCATCTTGCGGCGAGCTTTCTTTCACCAGAAGCGGGGGGGCGATGGAGCCGATGGCGATCATGACGGTTACCGGCGGCG
TGCTCGGGCCGGTCTTCGTGCTGCTGTCGCGGATCCAGCCGGTCGTCGACTTCTTCCGGCGGCTCTGCGACTGTCTCCGC
CACCCTAGCCGCCGCCCCGCCAGGCCGGTCGTAGCGCCGTGGAAACGTCAGGCTGCACAGGAGTGATATTTTTCTATGGA
A-TTTTCTGTTCTAACAGAAAGAGAGAGATAGGTGTTCACTG----TGGATGGATGGATGATTGAGCCATATGCAGTATG
TACGTGACTGCATGTTCTTGTTTTACCGGGTGTACGTAT--ATA-----TACATATGCTTATTATGGAAACAAAATTAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr5A_1_TraesCS5A01G169900
CCATCCAGCCATGATACATGATACACTGGCGAG-TTTCTGATTAAAACCCACTGTATTTGCTGGCAATCGCGCAGGTTAT
GGACTACGCGTCACTCCCGCACTTCTGCAAGAGGGAAGGGTCCGGTTCAGGCTCGTCGTCGGATGAAGTCGACTGCTACT
CGTACGACCATCCATTCCACCAGGAGCTGTACAACTATGTGAAGCAGCAAGCTCTGAGGAACCAGGACAGCGTCGGCCCC
GCGAAGCAAGGGTCGATGCATGTGAGGGTGCCGACGCCGGACCTGGAAGAGGCCAAGATCATGGAGACGATCCAGTCGGA
GCTCCACAGCCTCAAGGGAGGCGACGGCATTTCCCGCTCCTTCAGCAGGATCACCATCGAAGGACCATGATGGTATTATT
TCCTGCTCATATCCAAGATCGCCATGGATGTGACCCATGATGATCGGAGTGCCTCGAGATGCGCGGAGCAGGTAATCGCT
TATTTTATCTTATTTGACGCCAGGAAATTATTCTGGGGTTTATAGCAGTTCTTGCTTGCATTGTAACCGCTGGCTGAAAA
GCTCGACTAGG-----ATCATATCGGTAGAGGAAGCAGCAGTAGTAGTAATAGTAGTAGTAAAACAACGGATTCTAATAA
CCGAGTGAGTCTGTATCGTGTTGTCGAGGATGGTAGTAATTAGTT-TGATTAACCTGGCTAATGGATG----TACCATTT
GCGTTTTACTGTTTCCATCCATGCTTCTCATGGCAGGGAAATTACCATGCTCCCAGACATGAGTAGCACCATCTCTATGT
ATCGTATCAATCATCAGTATATAGTATATGTATGTATATGTAATCGCCCTCTGATGTTGCAACTGGTATTACCATTATGT
ATTTGGT-----GTTTACCTG-----------AAAAAGAATCTGCTGTCTGTTTCAACTTGCATGCACTGAGTCGGATCT
TGGCCAAGCACTGATAACTGCTCCCTGCCTCCATAAATAGACTTGCGTTTTGGTTGCCCGCGGTTACCGCAGCAAGGCAG
CATATAAGAT-----------GTGTCACCTTCCATTCACCTCACCTCATCTCACCTAGCTAGCAACAGAGACCAAATCTC
TGCATCTTGCGGCGAGCTTTCTTTCACCAGAAGCGGGGGGGCGATGGAGCCGATGGCGATCATGACGGTTACCGGCGGCG
TGCTCGGGCCGGTCTTCGTGCTGCTGTCGCGGATCCAGCCGGTCGTCGACTTCTTCCGGCGGCTCTGCGACTGTCTCCGC
CACCCTAGCCGCCGCCCCGCCAGGCCGGTCGTAGCGCCGTGGAAACGTCAGGCTGCACAGGAGTGATATTTTTCTATGGA
A-TTTTCTGTTCTAACAGAAAGAGAGAGATAGGTGTTCACTG----TGGATGGATGGATGATTGAGCCATATGCAGTATG
TACGTGACTGCATGTTCTTGTTTTACCGGGTGTACGTAT--ATA-----TACATATGCTTATTATGGAAACAAAATTAAT
ATTCCTACTATCAGCTTGTACAAACAAATTACGGAAACAGTGTCTAATTCACATCTAGATGTTTTTTAAGGATGTCACAT
CTAACCTTCCACAAGTATATAATGCATCAACAAGAAACAAAAAAAACTAGGACAAAAAAAATAGACCACAAACAGAGTGA
AAATCAGTTTAGATGTGGCATAACTATGTCACATCTATATGTGTCCTAGACAGACCCTTACGGAAATGTTCTCCCTGAGA
ATCTTGATCTTGAGGTTAATGATTTAGTTAGCACACCTGTGAGTGCTTCTTTCTGTAAGCCAGTGGGCACTGCTAATGCT
TGCAGAAGAACACCCACCGTACTGACTAAGGCCAAGACTTGTGGCTTATCTCACCCTTCTAAAATTTCTTAGTT-ATGAT
AGGTCTAATTTGGAATATTAGGGGCCTTGGACAACCTGGGAAAATTCAGTGCCTATGTGATACTATTGCCAAAACTAACC
CTGACTTTATTGGGTTC-CAAGAAACTAAAAGAGAAGTTATTGCTGAGGGTTTCTTCAAAACTATTGACAAATTTAATGA
CTATGCTTGGCACTTTTTACCTGCTGATAATACTGCTGGTGGGATCCTTTTGGGCTTTAAAGAAAATG-TTTTTGAGATT
ATTGGTTTTATTAACCAAAGATTTTCTATTGTAGCTACTATCAAAAATAAGACTGATGGATTTATTTGGCAGATGGTGTT
GGTTTATGGTTCTGCTTACTTAGAATTTAAGATGGATTTTATAGCTGAGTTGCATGATACTTTGAATGTTGCTTCTTATC
CTATTATGATGTGTGGGGATTTCAATTTAGTTAGGAATGAAACTGAGAAAAGCAGTGGGCATGTTAATCAACAAACTACC
TTCCTCTTTAATGATTGGGTCAATAGATGGGCCCTGATGGAAATTTCTATTTCTAATAGAGTCTTCACCTGGTCTAATAA
TCAGAGCTCTCCAATTTTTGCTGTCCTTGATAGAGTGTTCAC
>chr5B_17
----------------CATGACACATTGGCGAG-TTTCTGATTGAAACCTACTGTATTTGCTGGCCAT--CGCAGGTTAT
GGACTACGCGTCACTCCCGCACTTCTGCAAGAGGGAAGGGTCCGGTTCGGGTTCGTCGTCGGACGAAGTCGACTGCTACT
CGTACGACCATCCTTTCCACCAGGAGCTGTACAACTATGTGAAGCAGCAAGCTCTGAGGAACCAGGACAGCGTCGGCCCC
GCGAAGCAAGGGTCGATGCATGTGAGGGTGCCGACGCCGGACCTGGAGGAGGCCAAGATCATGGAGACGATCCAGTCGGA
GCTCCACAGCCTCAAGGCAGGCGACGGCATTTCCCGCTCCTTCAGCAGGATCACGATCGAAGGTCCATGATGACCTTGTT
TCCTGCTCATATCGAAGATCGTCATGGATATGATCCATGATGATCGGAGTGGCTCGAGATGCGCGGAGCAGGTAATCGA-
----TTATCTTATTTGACGCCAGGAAATTATTCTGGGGTTTATAGCAGTTCTTGCTTGCATTGTAACCGCTGGCTGCATA
GCTCGAGTAGGATCATATCATATCGGTAGAGGAAG------TAGTAGTAGTAGGAGCAGCAAAACATCGGATTCTAATAA
CC----GAGTCTGTATCGTGTTGTCGAAGATGGTAGTAACTAGCTCTGATTAACCTGGCTAATGGATGGATGTACCATTT
GCGCGTTACTGTTTCCAT----GCTTCTCATGGCAGGGAAATTACCGTGCTCCCAGACATGAGCAGCACGAGCTCTATGT
ATCTTATCAATCAGTA-TATATAGTATATGTATGTATATGTAATCGCCCCCTGATGTTGCAACTGGTATAT-CATTATGT
ATTTGAT-----GTTACCTGAACCACGACTTG-AAAGAAATCTCCCGTATGTTTCAACTTGCATGCACTGAATCAGATCT
TGGCCAAGCACTGATAACTGCTCCCTCCCTCCATAAATAGACGTGCGTTTTGGTTGCCCGCGGTTACCGCAGCAAGGCAG
CATATAAGATCTGCATCTCCTGTGTCACCTTCCAT---------------TCACCTAGCTAGCAACAGAGACCAAATCTC
TGCGTCTTGCGGCCATCTTTCTTTCACCAGAAGC-GGGGGGCGATGGAGCCGATGGCGATCATGACGGTGACCGGCGGCG
TGCTGGGGCCGGTCTTCGTGCTGCTGTCGCGGATCCAGCCGGTCGTCGACTTCTTCCGGCGGCTCTGCGACTGTCTCCGC
CACCCTAGCCGCCGCCCCGCCAGGCCGGTCGTAGCGCCGTGGAAACGTCAGGCTACACAGGAGTGATATTTTTCTGTGGA
A--TTTCTGTTCTAACAGAAAGAAAGAGATAGGCGTTAACTG----TGGATGGATGGATGATTGAACCATATGCAGTATG
TACGTGACTGCATGTTCTTCTTTTACCGGGTGTACGTAT--ATAGTACATACATACGCTTA-TATGGAAACAAAATTGCT
ATTCCTACTCTCAACTTGTGCAAACAAATTACGGAAA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr5D_17
----------------CATGACACATTGGCGAGGTTTCTGATTTGAACCTACTGTATTTGCTGGCCAT--CGCAGGTTAT
GGACTACGCGTCACTCCCGCACTTCTGCAAGAGGGAAGGGTCCGGTTCGGGTTCGTCGTCGGATGAAGTCGACTGCTACT
CGTATGATCATCCATTCCACCAGGAGCTGTACAACTATGTGAAGCAGCAAGCTCTGAGGAACCAGGACAGCGTCGGCCCC
GCGAAGCAAGGGTCGATGCATGTGAGGGTGCCGACGCCGGACCTGGAGGAGGCCAAGATCATGGAGACGATCCAGTCGGA
GCTCCACAACCTCAAGGGGGGCGACGGCATTTCCCGCTCCTTCAGCAGGATCACCATCGAAGGTCCATGATATC-TTATT
TCCTGCTCGTATCCAAGATCGTCGTGGATGTGATCCATGATGATCGGAGTGCCTCGAGATGCGCGGAGCAGGTAATCGCT
TATTTTATCTTATTTGACGCCAGAAGATTATTCTGGGGTTTATAACGGTTCTTGCTTGCGTTGTAACCGCTGGCTGCAAA
GCTCGAGTAGG-----ATCATATCAGTAGAGGAAG------TAGCAGCAGTAG-----------CATCGGATTCTAATAA
CCGAGTGAGTCTGTATCGTGGTGTCGAAGATGGTAGTAATTAGTT-TGATTAACCTGTCTAAT----GGATGTACCATTT
GCGAGTTACTGTTTCCAT----GCTTCTCATGGCAGGGAAATTGCCATGCTCCCAGACATGAGTAACACCAGCACTATGT
ATCGGACCA---ATCAGTATATAGTATATGTATGTATATGTAATCGCCTTCTGATGTTGCAACTGGTATAT-CATTATGT
ATTTGATTTGATGTTACCTGAACCACGACTTAAAAAGAAATCTGCTGTCTGTTTCAACCTGCATGCACTGAATCAGATCT
TGGCCAAGCACTGATAACTGCTCCCTCCCTCCATAAATAGACGTGCGTTTTGGTTGCCCGCGGTTACCGCAGCAAGGCAG
CATATAAGATCTGCGTCTCCTGTGTCACCTTCTATTCACCTTATCTCACCTCACCTAGCTAGCAACAGAGACCAAATCTC
TGCGTCTTGCGGCGATCTTTCTTTCACCAGAAGC-GGGGGGCGATGGAGCCGATGGCGATCATGACGGTGACCGGCGGCG
TGCTCGGGCCGGTCTTCGTGCTGCTGTCGCGGATCCAGCCGGTCGTCGACTTCTTCCGGCGGCTCTGCGACTGTCTCCGC
CACCCTAGCCGCCGCCCCGCCAGGCCGGTCGTAGCACCGTGGAAACGTCAGGCTGCACAAGAGTGATATTTT-CTATGGA
ATTTTTCTGTTCTAACAGAAAGAGAGAGATAGGTGTTAACTGTGGATGGATGGATGGATGATTGAACCACATATATGC-G
TACGTGACTGCATGTTCTTGCTTTACCGGGTGTACGTATATATC-----TACATATGCT---TATGGGAACAAAATTGCT
ATTCCTACTCTTAACTTGTGCAAACAAATTACGGAAACA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr1D_1693
GAAATA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------GTTCTCCCTGGGA
ATCTTGATCTTGAAGTTAATGATCTAGTTAGCACACCTGTGAGTGCTTCTTTTTGTAAGCCAGTTGGCACTGCTGATGCT
TGTAGAAGAACACCCATTGTACTAACTAAGGCCAAGCCTTGTGGCTTATCTCATCCTTTTAAAATTGCTTAG-T-ATGAT
AGGTCTTATTTGGAATATTAGGGGCCTTGGACAACCTGGGAAAATTCAGTGCCTATGTGATACTATTGCCAAAGCTAACC
CTAACTTTATTGGGTTC-CAAGAAACTAAAAGAGAGGTTATTGCTGAGGGTTTCCTCAGAACTATTGACAGATTTAATGA
GTATGCTTGGCACTTCTTGCCTGCTGATAATACTGCTGGTGGGATTCTTTTGGGCTTTAAGGAGAATG-TTTTTGAGATT
ATTGGTTTTATTAACCAAAGATTTTCTATTGTGGCTACTATCAAAAATAAGACTGATGGATTTGCTTGGCAGATGGTGTT
GGTTTATGGTTCTGCTTATTTAGAATTCAAAATGGATTTTATAGCTGAATTGCATGACACTTTGAATATTGTTGCTTATC
TTATTATGGTTTGTGGGGATTTCAATTTAGTTAGAAATGAAACTGAGAAAAGCAGTGGGAAAATTAACCAACAAACTACC
TTCCTCTTTAATGATTGGGTCAATAGATGGGCCCTGATGGAAATTTCTATTTCCAATAGAGTCTTCACCTGGTATAATAA
TCAGAGCTCTCCAATTTTTGCTGTTCTTGATAGAGTGTTCAC
>chr2D_1693
GAAATA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------GTACTCCCTGAGA
ATCTTGATTTTGAAGTTAATGATCTAGTTAGCACACCTTTGAGTGCTTCTTTCTGTAAGCCAGTTGGCACTGTTGATGCT
TGCAGAAGAACACCCATTGTTCTAACTAAGGCCAAGCCTTGTGGCTTATCTCATCCTTTTAAAATTGCTTAG-TTATGAT
AGGTATTATTTGGAATATTAGGGGCCTTGGACAACCTGGGAAAATTCAGTGCCTATGTGATACTATTGCCAAAGCTAACC
CTGACTTTATTGGGTTC-CAAGAAACTAAAAGAGAGGTTATTTCTGAGGGTTTCCTCAAAACTATTGACAGATTTAATGA
TTATGTTTGGCACTTCTTGCCCGCTGATAATACTGCTGGTGGGATTCTTTTGGGTTTTAAGGAAAATG-TTTTTGAGATT
ATTGGCTTTATTAACCAAAGATTTTCTATTGTGGCTACTATCAAAAATAAGATTGATGGCTTTATTTGGCAGATGGTGTT
GGTTTATGGTTTTGCTTATTTAGAATTCAAAATGGATTTTATAGCTGAACTTCATGACACTTTGAATATTGCTTCTTATC
CTATTATGGTTTGTGGGGATTTCAATTTAGTTAGAAATGAAGCTGAGAAAAGCAGTGGACAAATTAACCAACAAACTACC
TTCCTCTTTAATGATTGGGTCAATAGATGGGCCCTGATGGAAATTTCTATTTCCAATAGAGTCTTCACCGGGTCTAATAA
TCAGAGCTCTCCGATTTTTGCTGTTCTTGATAGAGTGTTCAC
>chr1B_1693
GAAATA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------GCTCTACCTGAGA
ATCTTGATTTTGAAATTAATGATCTAGCTAGCACACATGTGAGTGCTTCTTTCTGTAAGCCAGTTGGCACTGCTGATGCT
TGCATAAGAACACCCACTGTTCTAACTAAGGCTAAGCCTTGTAGCTTATCTCATCCTTTTAAAATTTCTTAG-TTATGAT
AGGTCTTATTTGGAATATTAGGGGTCTTGGACAACCTGGGAAAAATCAGTGCCTATGTGATACTATTGCCAAAGCTAAAC
CTGACTTTATTGGATTC-CAAGAAACTAAAAGAGAGGTTATTTCTGAGGGTTTCCTCAAAACTATTGATAGATTTAATGA
GTATGTTTGGCACTTCTTGCCTGTTGATAATACTGCTGGTGGGATTCTTTTGGGCTTTAAGGAAAATA-TCTTTGAGGTT
ATTGGCTTTATTAACCAAAGATTTTCTATTGTGGCCACTGGCAAAAATAAGGTTGATGGCTTTATTTGGCAGATGGTGTT
GGTTTATGGTTCTGCTTACTCAGAATTCAAATTGGATTTTATAGCTGAACTTCATGACACTTTGAATATTGCTTCTTATC
CTATTATGGTTTGTGGGGACTTCAATTTAATTAGAAATGAAGCTGAGAAAAGCAGTGGACAAATTAACCCACAAACTACC
TTCCTCTTTAACGATTGGGTCAATAGATGGGCCCTGATGGAAATTTCTATTTCCAATAGAGTCTTCACCTGGTCTAATAA
TCAGAACTCCCTGATTTTTGCTGTTCTTGATAGAGTGTTCAC
>chr7D_1693
GAAATA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------GTTCTTCATGAGA
ACCTTGATATTGAAGTCAATGAATTAGTTAGCACACCTGTGAGTGATTCTTCCTGTAAGCCAGTTGAAACTGCTGGTGCT
TGCAGGAAAACACCCACTGTTCTAACTAAGGCCAAGCCTTGTGGCTTATCCCATCCTTTTAAAATTGCTTAG-TTATGAT
AGGTCTTATATGGAATATTAGGGGCATTGGACAACCTGGACAAATACAGTGCCTTTGTGATACTATTGCCAAAGCTAATC
CTGACTTTATTGGGTTTTCAAGAGAGTAAAAGAGAGATTATTTCTGAGGGTTTCCTCAAAACTATTGATAAATTTAATAA
TTTTGTTTGGCACTTCTTGCCTGCTGATAATACTGCTGGTGGGATCCTTTTGGCTTTTAAGGAAAGTG-TTTTTGAGGTT
ATTGGCTTTATTAACCAATGATTTTCTATTGTGGCTACTATCAAAAATAAAAGTGATGGCTTTGTTTGGCAGATGGTGTT
GGTTTATGGTGCTGCTTATTTGGAATTCAAAATGGATTTTGTGGCTGAACTTCATGATACTTTGGATAATGCTTCTTATC
CTATTATGGTTTGTGGGGATTTCAATTTGGTTAGAAGTGAAGTTGAGAAAGGTAGTGGGCAAATTAACCAACAAACTACT
TTTTTCTTTAATGATTGGATCAATAGATGGGCCCTGATGGAGATTTCTATTTCCAATAGAGTCTTTACCTTGTCTAGTAA
CCAGAGTTCCCCAATTTTTGCCGTTCTTGATAGAGTGTTCAC
>chr1A_1693
GAAATA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------GTTCTTCCTGAGA
ACCTTGATATTGAAGTAAATGATTTAGTTAGCACACATGTGAGTGATTCTTCCTGTAAGCCAGTTGGCATTGCTGGTACT
TGTAGGAAAACACCCATTGTTCTAACTAAGGCCAACCCTTGTGGCTTATCCCATCCTTTTAAAATTGCTTAG-TTATGAT
AGGTCTTATATGGAATATTAGGGGCCTTGGATAACCTGGGAAAATACAGTGCCTATGTGATACTATTGCCAAAGCTAATC
CTGACTTTATTGGGT-TTCAAGAGACTAAAAGAGAGATTATTTCTGAGGGTTTCCTCAAAACTATTGATAAATTTAATAA
TTTTGTTTGGCATTTCTTGCCTGCTGATAATACTGCTGGTGGGATCCTTTTGG-TTTTAAGGAAAATGTTTTTTGAGGTT
ATTGGCATTATTAACCAAAGATTTTCTATTGTGGCAACTATCAAAAATAAAAGTGATGGCTTCGTTTGGCAGATGGTGTT
GGTCTATGGTTCTGCTTATTTGGAATTCGAAATGGATTTTGTGGCTGAACTTCATGATACTTTGAATAATGCTTCTTATC
CTATTATGGTTTGTGGGGATTTCAGTTTGGTTTGAAGTGAAGCTGAGAAAAGCAGTGGGCAAATTAACCAGCAAACTAAT
TTCATCTTTAATGATTGGATCAATAGATGGGCCCTGATGGAGATTTCTATTTCCAAAAGAGTCTTTACCTGGTCTAATAG
CCAGAGTTCTCTGATTTTTGCCGTTCTTGATAGAGTGTTCAC
>chr5B_1697
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TGTTCTCCCTGAGA
ATCTTGATATTGAAGTTGATGAGTTAGTTAGTACTCCTGTGAGTGTTTCTTCTTGTAAGCCAGTTGGCACTGCTGTTGCT
TGCAGAAGAACACCCACTGTTCTAACTAAGGCCAAGCCTTGTGGCTTATCTCACCCTTTTAAAATTACTTAA---ATGAT
AGGTCTTATTTGGAATATTAGGGGTCTTGGGCAACCTGGGAAAATTCAGTGCCTTTGTGATACTATTGCTAAAGCTAATC
CTGACTTTATTGGGTTT-CAAGAAACTAAAAGGGAGGTTATTTCTGAGGGTTTCCTCAAATCTATTGACAAATTTAATGA
ATTTGTTTGCCATTTATTGCCTGCTGATAATACTGCTGGTGGGATTCTTCTGGGTTTTAAGGACAGTG-TTTTTGAGGTT
ATTGGCTTTATTAACCAGAGGTTTTCTATTGTGGCTACTGTCAAGAATAAGAATGATAGCTTTACTTGGCAGATGCTAGT
GGTGTATGGTTCTGCATACCTAGAATATAAGTTGGATTTTATAGATGAACTGCATGATACCCTGAATGTAGCTACCTACC
CTGTTATGATTTGTGGGGACTTCAATTTAGTCAGAAATGATGCTGAGAAAAGTAGTGGGCAAATTAACCACCAGACTACC
TTCTTATTTAATGATTGGGTCAATAGATGGGCCCTGATGGAAATTTCTATTTCCAATAGAGTCTTCACATGGTCTAATAA
TCAGAGTTCTCCCATTTTTGCTGTTCTTGATAGAGTGTTCAC
>chrUn_1698
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------GTTCTCCCTGAGA
ATCTTGATGTTGAAGTTAATGATCTAGTTAGCACACCTGTGAGTGCTTCTTTCTGTGAGCCAGTTGGCACTGCTGATGCT
TGCAGAAGAACACCCATTGTTCTAACTAAGGCCAAGCCTTGTGGCTTATCCCACCCCTTTAAAATTGCTTAG-TTATGAT
AGGTCGTATTTGGAATATTAGGGGCCTTGGACAACCTGGGAAAATTCAGTGCCTTTGTGATACTATTGCCAAAGCTAACC
CTGACTTTATTGGGTTC-CAAGAAACCAAAAGAGAGGTTATTTCTGAGGGTTTCCTCAAATCTATTGATAGATTTAATGA
GTATGTTTGGCACTTTTTGCCTGCTGATAATACTGCTGGTGGGATTCTTTTGGGTTTTAAGGAAAATG-TTTTTGAGATT
ATTGGCTTCATTAATCAAAAAAATTCTATTGTGGCTACTATCAAAAATAAGATTGATGGCTTTATTTGGCAGATGATGTT
AGTTTATGGTTCTGCTTACTTAGAATACAAAATGGATTTTATAGCTGAACTTCATGACACTTTGAATGTAGCTACTTATC
CTATTATGGTTTGTGGGGACTTCAATTTAGTTAGGAATGAAGCTGAGAAGAGAAGTGGACAGATTAACCAACAAATTACC
TTCCTCTTTAATGATTGGGTCAATAGATGGGCCCTGATGGAA-TTTCTATTTCCAATAGAGTCTTCACCTGGTCTAATAA
CCAGAGCTCTCCCATTTTTGCTATTCTTGATAGAGTGTTCAC
>chr1B_1698
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------GTTCTCCCTGAGA
ATCTTGATGTTGAAGTTAATGATCTAGTTAGCACACCTGTGAGTGCTTCTTTCTGTGAGCCAGTTGGCACTGCTGATGCT
TGCAGAAGAACACCCATTGTTCTAACTAAGGCCAAGCCTTGTGGCTTATCCCACCCCTTTAAAATTGCTTAG-TTATGAT
AGGTCGTATTTGGAATATTAGGGGCCTTGGACAACCTGGGAAAATTCAGTGCCTTTGTGATACTATTGCCAAAGCTAACC
CTGACTTTATTGGGTTC-CAAGAAACCAAAAGAGAGGTTATTTCTGAGGGTTTCCTCAAATCTATTGATAGATTTAATGA
GTATGTTTGGCACTTTTTGCCTGCTGATAATACTGCTGGTGGGATTCTTTTGGGTTTTAAGGAAAATG-TTTTTGAGATT
ATTGGCTTCATTAATCAAAAAAATTCTATTGTGGCTACTATCAAAAATAAGATTGATGGCTTTATTTGGCAGATGATGTT
AGTTTATGGTTCTGCTTACTTAGAATACAAAATGGATTTTATAGCTGAACTTCATGACACTTTGAATGTAGCTACTTATC
CTATTATGGTTTGTGGGGACTTCAATTTAGTTAGGAATGAAGCTGAGAAGAGAAGTGGACAGATTAACCAACAAATTACC
TTCCTCTTTAATGATTGGGTCAATAGATGGGCCCTGATGGAA-TTTCTATTTCCAATAGAGTCTTCACCTGGTCTAATAA
CCAGAGCTCTCCCATTTTTGCTATTCTTGATAGAGTGTTCAC
>chr4B_1698
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------GTTCTCCCTGAGA
ATCTTGATATTGAAGCTGATGATCTAGTTAGTACACCTGTGAGTGCCTCTTCTTGTAAGCCAGTTGGCACTGCTGATGCT
TACAGAAGAACACCCATTGTTCTAACTAAGGCCAAGCCTTGTGGCTTACCTCACCCTTTTAAAATTGCTTAG-ATATGAT
AGGTCTTATTTGGAATATTAGGGGTCTTGGACAACCTGGCAAAATTCAGTGCCTATGTGATACTATTGCTAAAGCTAACC
CTGACTTTATTGGGTTC-CAAGAAACTAAAAGGGAGATTATCTCTGAGGGTTTCCTCAAATCTATTGATAGATTTAATGA
GTTTGTTTGGCACTTTTTGCCTGCTGATAATACTGCTGGTGGGATTCTTTTGGGCTTTAAGGATAGTG-TTTTTGAGGTG
ATTGGCTTTATTAATCAAAGGTTCTCTATTGTGGCTACTGTCAAAAATAAGAGTGATGGCTTTACTTGGCAGATGATGGT
GGTTTATGATTCTACTTACTTAGAATATAAAATGGATTTTATAGCTGAACTTCATGATACCTTGAATGTAGCTACCTATC
CTATTATGATTTGTGGAGACTTCAATTTAGTCAGGAATGATGCTAAGAAAAGCAGTGGGCAAATTAACCAACAAACTACC
TTCCTCTTTAATGATTGGGTCAATAGATGGGCCCTGATGGAAATTTCTATTTCCAATAGAGTTTTCACATGGTCTAATAA
TCAGAGTTCCCCCATTTTTGCTGTTCTTGATAGAGTGTTCAC
>SNPs
SS-SSSSSSSSSSSSS-----S---S-----------------S-----S---------------S--SS----------
------------------------------------------------S--S----------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
---------------------------------------------------------------S--------SSS-----
---------------------S-----------S----------------------------------------------
----------------------------------------------------------------------------S---
------S----------------------------SSSSSS--------S---S--S--S------S-------------
---------------------------S----------------------------------------------------
---SS-------------SSSS-------------------------------------------------S--------
---------------------------------------------------------------------SSS--------
-----S---------SS-SSS---------------SS---------------------------------S--S-----
--------------------------S---------------S-------------------------------------
-----------------------------------------S-S----S-------------------------------
---S-----------S------------------S----------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S---------------------------S--------------
-------------------------------------------------------------S---------------SS-
---------S---S-----S-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
-------------S--------------------------------------------------S---------S-----
-----------------S-----S------------S---------------------S-------------S-------
------S------------------------------------------------------------------S------
-----------------------------------S------------------S-------------------------
S-----------------S-----------------------------------------S-------------------
--------------------------------S-----------------------------------------------
------------------------------------------------S-------------------------------
----------S--------------------------------------------------SS----S------------
-----------------------------------------------------S--------------------------
------------------------S-----------------
>forward_66
----------------------------------------------ACCCACTGTATTTGCTGGCA--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_1124
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---ATCTTGCGGCGAGCTTTCTT---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>forward_384
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------GCAGGATCACCATCGAAGGA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_1825
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------GGGCACTGCTAATGCT
TGC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
