>input_sequence_79222
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---------------------------------------------------------------AGCGAGAAAAACCAACC
TAAATCA----------TCGCCACCACAACTTTGGAAGCCCCGCGCACGCAAAGCCCTAGCTAGGTGGTAGCGAACTCAG
CGAGGGAAGGATAGTGCCGATGGCCGAGGAGGATCGGACGGTGCTGGTACGGTGCGAGGACCTCGTCCGGGTCGAGCTGC
CGGCGTTGCTGGCGCAGCGGGCGGGGCGCGTCGCGGCGGCGCTGGAAGCCGGGGAGCGCGTGGTGGAGCTGCCGCGAGGG
GTCTCCGGCAAGGGCCTGGCGACGGCGGCGGCGTACTACGAGGCCCGCGCGGAGGCGGAGGCCTGCGGCGTGGACGGCGG
CGAGTTCGACGGCGAGTTCGTCCGCGGGCTGACGCACGACGCGGCCATCGACCTCATCCACGCCGCCCACCACCTCGGCG
ACCAGGCGCTCTTCAACCTCTTCGCAGGCTACAGGGCTAATCAC----TTCTAAGTACAGTAGTAAA-------------
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-----------------------------------
>chr5A_1_TraesCS5A01G192200
TGAACGAACATCGTTGGACGGGCTAAAATAAATTCATAAAAATGGAAACACCAATGCCAAATCTAGGAATTAAACCTTGT
GGCCAGGTTACATCAAAAGAACCTAACAATTTGAGATAGACTCAGTTACTTTAGTTAACAAAGAGGAGGAATCGTTATAA
GGAAGTGGGAACTTTTGTTTTCTTTTCAGGGAAAATCTAGCTTTTTCCATTAGCGGTGGAAAATCCAAATTGCCCACCAA
AAACAGATGAAAAAGGTGTGGCTGCCCCTCCAGGGGCAGGTGCATCCGCATGAGCAGTAACTTCAGAAAAGAAAAATACA
AAAAGAAAATTGAAAAAATAAATCTGGTTTTGTCTTTTTACATCAAACAAGATCAAAAGTTTTTAGCTTCTTACAAAATT
TCGTGAACAAATACCATTCAAGGAGCCCTCACAGAAAAAACAAAACCACTTCTCAAAAGTGAACAAAACATTGAACACTG
ATTTTGTTATTTCTGGTGAGGGCGCCTCGAATGTTATTTGTGTACGAAACTTTGCAAAAAGCTAAAAGTTGGGATCATGT
TTGATATCCAAAAAATTCAGAATTTTCCGATTCTGTTTTGTATTGTTTTCTTCTTCTAAATCCACTCAGTGTAGGTGCAC
CCGGGAGTATAGAGAATCCAATCTCCAAATGAATACAAAGGCACGCGTTTCAATCATCATCCTATATCGTCAACGGCCAT
ACCATGGGCGAAACAGAAACTTTTTTGTATTATATCTCGCAAAAGAAAACTTTTTTGTATTGGAAGTAGCGAAACAGACG
GGGCTTCATGTTCTTGCTGCAAAAGAAATCGACTCAGAGCCGTCCCTTTT-CCGATCATGCCAAGGAACGGGACCACAG-
---------------CTCGATCGATCCGAGCATCACACGTACTACGTTCTCTTCCCACAGGCCGAGTCGGACCTGATCC-
CGTGTCGTGTGTGGCGCGCACCCATATATACATACGCGCACC---ACCCCTCGTGGC--GCCCAGCGAGAAAAACCAACC
TAAATCA----------TCGCCACCACAACTTTGGAAGCCCCGCGCACGCAAAGCCCTAGCTAGGTGGTAGCGAACTCAG
CGAGGGAAGGATAGTGCCGATGGCCGAGGAGGATCGGACGGTGCTGGTACGGTGCGAGGACCTCGTCCGGGTCGAGCTGC
CGGCGTTGCTGGCGCAGCGGGCGGGGCGCGTCGCGGCGGCGCTGGAAGCCGGGGAGCGCGTGGTGGAGCTGCCGCGAGGG
GTCTCCGGCAAGGGCCTGGCGACGGCGGCGGCGTACTACGAGGCCCGCGCGGAGGCGGAGGCCTGCGGCGTGGACGGCGG
CGAGTTCGACGGCGAGTTCGTCCGCGGGCTGACGCACGACGCGGCCATCGACCTCATCCACGCCGCCCACCACCTCGGCG
ACCAGGCGCTCTTCAACCTCTTCGCAGGCTACAGGGCTAATCAC----TTCTAAGTACAGTAGTAAAGCTTTTTATAGAG
TCAGTTTATGTTTTTTTTTGTAGGGAATTCGGTTATGTTGATCGGCTGAATTTGACTTGTATTGATGCTACCTTGATTAA
TCATTATGCGATATATGTGGGCTTGGAAGAAACAAATGATCCGTAGTACATTGTTTTTCTTTTTGTGAAACAGTTCACAT
TGTCTTGGTTTTAAGGTCGTGTTTTCATGCACATATACCATG--------------------------------------
--------------------------------------------------ACAAAACTGACAACAAAGCTTTATATAGCA
GCTCGATCAGTTTCGTTGTTAAATATAAGAAGACGACACACATCCAACGACAAAAATTTGAAGCAAGTCTTGCGATGCAC
AAGGACGCCCAAGCACCAGCCAAGGCGAATCTTCCAAACAACGGAACACCGAACACGCAGGGAGCAAAAACATAAGACTC
ACGAAAAACACATCCTAGCACGCACGCGAATTTCCTGATGCGACCCAAACTGTACTACACAATAGAACAAGGAAAGAAGA
TGTGCATAGCAATCGGCCGGCAGAAATTATGGATGCACAAAGGGCGTGAATCATGCCGTCATCTCTTTTAAAAACGACTT
TGCAGCGCCAAACATTTTTTCGAGGCAAAAAACTTTTTTTTTGCGAGGAACAAAGGAAAAAACTTTGCCAGCCCATTTTT
TTTACGCAACTAAGGAGTTTTATTCATGAATCAAAGGGTTACAATCGAGTGGCAATAGATCCTCACAACATGGAGGACAT
CTGCTCATCCACACCGCAGTACACGACTCGGCTCGGCTATAATTTGCCATACAATCTGCTACCCTATTTTGAGCTCTACT
GATTTTCTGAGGAATAAACTCCCTACCAATCATCATCGCCTTGATTTCAACAACTAAGTGTCCATAAGCTGAACGAGACC
AATTATCACCTACGAGTATTGAGAGAACCTCTAAGGAATCCGCTTGTACCATCACTGAACAATCCGTATGTTGTGCAGCA
AGGGCCATACCTTGCAAAAGTGCATGTATCTCCGC
>chr5B_132
--------------------------------------------------------------------------------
---------------------------------------------------TAGTTAATAAAGAGGAGATATAACTATAA
GGAAGTGGGAACTTTTGTTTTCTTTTCAGGGAAAGTTTAGGTTTTTCCATAAGCGCTGGGAAATTCAAATCGCCCACCAA
AAACAGATGAGAAAGGTGTAGCTGCTTCAGGGTGTAAA--TGCACCCACATAAATAACAACTTCAGAAAAGAAAAAAAAT
--------------------AATCTAATTTTGTCTTTTTACATCAAACAAGACCAAAAGTTTTTAGCTTCTTGCACATTT
TTGTGAGCAAATAACATTG-AGGAGCCCTAATAGAAAAAACAAAATCATTGCTCAAAAGTGAACAAAACTTCGAACACTG
ATTTTGTTATTTTTGGCGAGGGCTCCTCGAATGTTATTTGTGTCCAAAAATTTGCAAGGAAATA----------------
-----------------------------ATTCTGTTTTGTATTTTTTTCTTATGATTTTACT-----------GTTCAT
CCGGGAGTAGAAAATTAAACC---CCAAATGAATACAAAGGCACGCGTTTCAATCACCATCT--TATCGTGAACGGCCAC
ACCATGGGCGAAACAGAAACTTTT---------------------------TTTGTGTTTGGGAAGTAGCGAAACAGACG
GGGCTTCATGTTCTTGCTGCAAAAGAAATCGATTCAGAGCCGTCCCTTTTTCCGATCATACCAAGAAACGGGACCACAG-
---------------CTCGATCGATCCGAGCATCACACGTACAACGTTCTCTTCCCACAGGCCGAGTCGGACCTGATCCC
CGTGTCGTGTGTGGTGCGCACCCATATATACATACGCGCACC---ACCCCTCGTAGC--ACCCAGAA-------------
-AAATCAACCTAAACCATCGCCATCGCAACTTTGGAAGCCCCGCGCACGCAAAGCCCTAGCTAGGT---AGCAAACTCAG
CGAGAGAAGGATAGTGTCGATGGCGGAGGAGAATCAGACGGTGCTGGTACGGTGCGCGGACCTCGTCCGGGTCCAGCTGC
CGGCGTCGCTGGCGCAGCGGGCGGGGCGCGTCGCGGCGGCGCTGGAAGCCGGGGAGCGCGTGGTGGAGCTGCCGCGAGGG
GTCTCCGGCAAGGGCCTGGCGACGGCGACGGCGTACTACGAGGCGCGCGCGGAGGCGGAGGCGTGCGGCGTGGATGGTGC
CGAGTTCGACGGCGAGTTCGTTCAAGGGCTGACGCACGACGCGGCCATCGACCTCATCTACGCCGCCCACCACCTCGGCG
ACCAGGCGCTCTTCAACCTCTTTGTGGGCTACAGGGCTAATTGC----TTCTAAGTAGTAAATC------TTTTATAGAA
TTAGTTTATGTTTTTTTTCAT--GGAATTCGGTTATGTTGATCGGCTGAATTTGACTTGTATTGATGCTACCTTGATTAA
TCATTATGCGATATATGTGTGCCTGGAAGGAACAAATGATCCGTAGTACATTGTTTTTCTTTTTGTGAAACAGTTCGCAT
TGTCTTGGTTTTAAGATCGTGTTTTCATGCACATACCATGTCCACATCCTCTCCCGCGTGTCAGGTGTTGAACCAGAA--
--ACATCGAAGCACAGCACAACAATGGAGACCAAACCAAGGACAAAAGTCACAAAACCGACAACGAAGCTTTATATAGCA
GCTCGATCAGTTTTGTCATTAAATATAGGAAGACGACACACATCCAACGACAAAAATTTGAAGCGAGTCCTGCGATGCAC
AA-GACGCCCAAGCACCAGCCACGGCGAATCTTCCAAACAACGCAACACCGAACACGCAGGGAGCAAAATCATAA-ACTC
ACGAAAAACACATCCTAGCACGCACACGAATTTCCTGATGCCACCCAAACTGTGCTACACAATAGAACAAGGAAAGAAGA
TGCGCATAGCAATCGGCCGGCAGAAATTATGGATGCACAAAGGGCGTGA-------------------------------
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>chr5D_787
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------------------------------------------------------------------TAGCGAAACAGACG
GGGCTTAATGTTCTTGCTGCAAAAGAAATCGATTCGGAGCCGTCCCTATT-CCGATCATGCCAAGAAACGGGACCACATC
TCAGCACTGCCACATCTCTATCGATCCGAGCATCACACGTACTACGTGT-------------------------------
CGTGTCGTGTGTGGTGCGCACCCATATATACGCGCGCGCACC---ACCCCTCGTGGC--ACCCAGAA-------------
-AAATCA----------TCGCCATTGCAACTTTGGAAGCCCCGCGCACGCAAAGCCCTAGCTAGGT---AGCAAACTCAG
CGAGAGAAGGATAGTGTCGATGGCGGAGGAGGATCAGACGGTGGTGGTACGGTGCGCGGACCTCGTCCGGGTCGAGCTGC
CGGCGTCGCTGGCGCAGCGGGCGGGACGCGTCGCGGCGGCGCTCGAAGAAGGGGAGCGCGTGGTGGAGCTGCCGCGAGGG
GTCTCCGGCAAGGGCCTGGCGACGGCGGCGGCGTACTACGAGGCCCGCGCGGAGGCGGAGGCGTGCGGCGTGGACGGCGG
CGAGTTCGACGGCGAGTTCGTGCGCGGGCTGACGCACGACGCGGCCATCGACCTCATCCACGCCGCCCACCACCTTGGCG
ACCAGGCGCTCTTCAACCTCTTTGTGGGCTACAGGGCTAATTAC----TTCTAAAGC---------------TTATATAA
TTAGTTTATGTTTCTAGCG---GGGAATTAGTTTATGTTGATCCGCTGAATTTAACTTGTATTGATGCTACCTTGATTAA
TCATTATGCGATATATGTGTGCCTGGAAGAAACAAATGATCCGTAGTACATTGTTTTTCTTGTTGTCAA--------CAT
TCTCTTGGTTTTAAGATGGTGTTTTCATGCACATACCATGTCCACATCCTCTCCCGCGTGTCCGGTGTTGAACCAGGAAC
ATACATCGAAGCACAGCAGAACAATGGAGACAAAACCAAGGA---------CAAAACTGACAAGAAAACTTTATATAGCA
GCTCGATCAGTTTAT------AATATAAGAAGACGACACACATCCAACGACAAAAATTTGAAGCGAGTCTTGCGATGCAC
AA-GACGCCCAAGCACCAGCCACGGCGAATCTTCCAAACAACGGAACACCGAACACGCAGGGAGCAAGATCATAA-ACTC
ACGAAAAACACATCCTAGCACGCACACGAATGTCCTGATGCCACCCAAACTGTACTACACAATAGAACAAGGAAAGTTT-
TGCGCATAGCAAT----CGGCAGAAATTATGGATGCACAAAGGGCGTGA-------------------------------
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-----------------------------------
>chr5A_822
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---------------------AAAGAAATCGTCTCAGAGCTGCCGCTTTT-CCGATCACGCCACGAAACGGAGCCTAACC
TTTACAACACCTT---------GATCCGAACACATGACACG-TACGTCCTCTTCCCACCAACCGAGTCGGGCTCGATCC-
------GTGTGGCCGGCGCACCCATATATACGCGCGCGCGCC---GCCCCTCGTGGC--ACCCAGCGAGAAAAACCAACC
ATCGT------------------------CTTTGGAAGCCCGGCGCACGCAGAGCTCTAGCGAA-------CGAACTCG-
---GCGAGGGATGGCGGCGATGGCGGGGGAGGAGCAGACGGTGCTGGTGCGGTGCGCGGACCTGGCCAAGTTCAAGGTGC
CGGCGTCGGTGGCGCGGCGGGCGGGGAGCGTCGCGGCGGCGCTGGAGGCGGGGCAGAGCGTGGTGGAGCTGCCGCGGGGG
GTCTCCGGCAAGGGCCTCGCCACGGCGGTCGCGTACTACCAGGCCCGCGCGGAGGCGGAGGCGCGCGGCGCGGACGGTGG
CGAGTTCGACGGCGAGTTCGTCCGCGGGCTGACGCACGACGCCGCCATCGACCTCATCTACGCCGCGCACCACCTCGGCG
ACGAGGCGCTCTTCAACCTCTTTGCAGGCTACAGGGCT------------------------------------------
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-----------------------------------
>chr5B_822
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---------------------AAAGAAATCAACTCAGAACTGCCGCTTTT-CCGATCACGCCACGAAACGGAGCCTAACC
TTTACAACACCTT---------GATCCGAAC-CATGACACG-TACGTCCTCTTCCCACCAACCGAGTCGGGCTTGATCC-
------GTGTGGCCGGTGCACGCATATATACGCGCGCGCGCCCCCTCCCCTCGTGGCACACCCAGCGAGAAAAACCAACC
ATCGT------------------------CTTTGGAAGCCCCGCGCACGCACAGCACTAGCGAA-------CGAACTCG-
------AGGGATCGTCGCGATGACGGGGGAGGAGCAGACGGTGCTGGTGCGGTGCGCGGACCTCGCCAAGTTCGCGGTGC
CGGCGTCGGTGGCGCAGCGGGCGGGGAGCGTCGCGGCGGCGCTGGAGGCGGGGCAGAGCGTGGTGGAGCTGCCGCGGGGG
GTCTCCGGCAAGGGCCTCGCCACGGCGGTCGCCTACTACCAGGCCCGGGCCGAGGCGGAGGAGCGCGGCGCGGACGGTGG
CGAGTTCGACGGCGAGTTCGTCCGCGGGCTGACGCACGACGCCGCCATCGACCTCATCTACGCCGCGCACCACCTCGGCG
ACGAGGCGCTCTTCAACCTCTTTGCAGGCTACAGGGCTAATTAGTTCATTATAAGTAGT---------------------
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-----------------------------------
>chr5D_822
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---------------------AAAGAAATCGACTCAGAACCGCCGCTCTT-CCGATCACGCCACGAAACGGAGCCTAACC
TTTACAGCACCTT---------GATCCGAAC-CATGACACG-TACGTCCTCTTCCCACCAACCGAGTCGGGCTTGATCC-
------GTGCGGCCGGCGCACCCATATATACGCGCGCGCGCC---TCCCCACGTGGG-CACCCAGCGAGAGAAACCCAAC
CGTCGTCGTGCA------------CACAGCTTTGCAAGCCCCGCGCACGCGAAGCTCCGGCGAA-------CGAACTCG-
---GCGAGGGATCGTATCGATGGCGGGGGAGGAGCAGACGGTGCTGGTGCGGTGCGCGGACCTCGCCAAGTTCGCGGTGC
CGGCGTCGGTGGCGCGGCGGGCGGGGAGCGTCGCGGCGGCGCTGGAGGCGGGGCAGAGCGTGGTGGAGCTGCCGCGGGGG
GTCTCCGGCAAGGGCCTCGCCACGGCGGTCGCGTACTACCAGGCCCGCGCCGAGGCGGAGGCGCGCGGCGCGGACGGCGG
CGAGTTCGACGGCGAGTTCGTCCGCGGGCTGACGCACGACGCCGCCATCGACCTCATCTACGCCGCGCACCACCTCGGCG
ACGAGGCGCTCTTCAACCTCTTTGCAGGCTACAGGGCTAATTAGTTTAAGTA----------------------------
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-----------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S---------SS--SSS-----
----------------------------------S-S---S---------S----S---S----S-----S---------
----------S--------S-----SS-SSSSS-SSS-SS----S--S---S-SS-SS------------------S-SS
SSSSSSSSSSSSSSSSSSSS-----SS-------------------------S-------------------S--S-S--
-S----S------S----SS---------S-S-------------S--S-S------------------S-S--------
------------S---S------S-------------------S-S---S-------SS-SS--SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S-------S-SS-SSSS-SSSSSSSSSSSS--S--S
---------S-S-SSSSSSSSSSS--------------------------------S----SSS------S--------S
------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS---S---S-S-------------------
-----------------------------------------------------------------S--------------
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--------------S--------------------------------------------S--------------------
S----------------------S------------------------------------------SSS-----------
----S-----------S-------S----------S--------------------S-----------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
----------------------S------------------S---------------SSSS-SSSSSSSS---------S
-S----------------SS-S----------------------------------------------------------
-------------------S--S-----------------------------------------------------S---
---------------S-------------------SSSSS-S--------------------------------------
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-------------S--SS----------------------------------------------S---------------
--S-------------------S----------------------------------------------S-----S----
-------------------------S---------------S--------------------------------------
--S----------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_25
-----GAACATCGTTGGACGGGCTA-------------------------------------------------------
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>reverse_2026
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-------------------------GCGAATTTCCTGATGCGACC-----------------------------------
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-----------------------------------
