>input_sequence_79094
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---------------------------ATGAGGAGCGGCGGCGACGTCAAGTCCTTCTTCCGGCAGCAGAAGGCCCACTC
CAGCGCAGCGGCCGCCA---AGCCCACCAGCGGCGTCTCCAAGA---AGCCGGCGCACCACCACCACCAGAAGCAAGCGG
CGGCG---------------CGCCCGACGCCAGGTACGCCGCCGTACGCCCAATCCGAG------------CTCCGCCGA
TTCATACGCCCAACGCGGATTTGACCGCTCGATCGATCGATCTGGTGTTTATTTA-----TTTTCAATCTACTGTTGCTT
TTGCGGCAGATCACGGTGACGGCGCCGACGCG---AGGAG---GGAGGAGGCGGAGAACGCGGAGAGGAAGGCCAGGGAG
TTCGACATGGACATGCGCTACGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAGCGCGCCGCCGCGCTGGGCCT
CGCCCCGCCGCCGCACGCGCTCTGCTCCGACGACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAG----------------
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--------------------------------------------------------
>chr5D_1_TraesCS5D01G080100
GAGCCTGGCTAAGAAAAAACGACATTGTAAGGTAGTTTGATTGCTTGCATATGGGATATTGTCATCGTGAATGCAATTTT
CACCCGACAATTTGGTTGCATACATGCATGGGTATTAGGAGTTAACCACTACAATTAAACCACACACCTCAGAGCTTGTT
GCGATATGGCAGAAGCAGAGCACGTCGTCCGCGCGCGTCCATCCTGTCTCTGAAGCATAGACGAGCTGACACTGGTGACC
TTCGACCTAGCCGCGGCGCAAGCAAGAGCAAAGGACACTGGCGAGGAGAAGAAGAAGACGATGCCCTGTCAGGACAGAGG
CAACCGCGACAACAGTTAGAAGGCCAACAGTACCGTTTCATTTGTCCAGGGGTTTATCAACCGTCGATCTGCGATCCTAC
GGCTCCAGCGAGTGTACCGCTTCACGCTAAAGTGACTCACTCTCCGCCGTAGATCTCGAGATGTGCGGCTCCTGCCGTTG
TAACGTCTTTTCAAACTTTACCTCAGTGCTGTAAACTGAACCTGTCGCTGTCTTTGCTTTTCACATGCTCCATTCCCTTT
TTAACCCTCCTCCGGCTTGTGGAGAGGGCATTCTGAATAATTCGAGTAAATTGCACAGAAGTACCACAATTGGGGCATTG
GAAGCAGATTGGTACCAAGTTTGGTAATTTTTACATGTCAGTACCAAGTCTGGGGCTAGACGTTACAAAAAGGTCTAAAT
CGCGTATAAACGCGTATTGACAGTGTATCTGACCGGCAGGGCCCGCCTGTCAGCTGCTGACGTGGCATTTTTTT-TTGCA
GAAA------CCCCCCACGGTG------------TCGCTCCGCGCCCGCCTCGCC------GCCCTCGCCCTCTCCCCAT
GGCGGCCTCCTACCTCAGCCGGCGCGCGCACGACCCCAGCGCGCCGGTGGTGCTGACCCCGCC-----------------
--GGCGAGAGATCGCGCCGCCGGCGAGAG-------------------AGAGAAATGAAATACAACAGAGAGATCGCGCC
GCCGGCGA--GAGAGAGA--GAGAGCCATGAGGAGCGGCGGCGACGTCAAGTCCTTCTTCCGGCAGCAGAAGGCCCACTC
CAGCGCAGCGGCCGCCA---AGCCCACCAGCGGCGTCTCCAAGA---AGCCGGCGCACCACCACCACCAGAAGCAAGCGG
CGGCG---------------CGCCCGACGCCAGGTACGCCGCCGTACGCCCAATCCGAG------------CTCCGCCGA
TTCATACGCCCAACGCGGATTTGACCGCTCGATCGATCGATCTGGTGTTTATTTA-----TTTTCAATCTACTGTTGCTT
TTGCGGCAGATCACGGTGACGGCGCCGACGCG---AGGAG---GGAGGAGGCGGAGAACGCGGAGAGGAAGGCCAGGGAG
TTCGACATGGACATGCGCTACGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAGCGCGCCGCCGCGCTGGGCCT
CGCCCCGCCGCCGCACGCGCTCTGCTCCGACGACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAGACTAGGGCATCG-CCC
CAGGGCCCCG-----------TCGTATCACCGATCC------------------GCCA---CTCCTCGTGGTTCTGCCTA
CTGCTTCTTCTGTAGCCA----------TCAGTCTTCGTGTTGTCTTCAGTC----TTCGTCTGTACGTTTGT-------
---GTCGATCCTGCTGGGTGCGTGC----GATGCCGTGTGATCCGATGCGATGCTGTATTAATC------------TCAG
TATAATCTTTGCTGCATCTG------------------------------------------------------------
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----------------------------------GTGTGTTGC-------------------------------------
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---AAATCTCTCTATATCCCATTACAGTTGAGGTTTTTTGAGCAATGTTATTTGGGAATGCACGCG--------------
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-----------------GATGACCCTGATTGAAAATTAGAATGAACGTTCTATATGACC--GCAC-TTGATCCAATACGA
ACGCTCTCAAATCAAATCAGAAGAAAAATGCAGTTTTCTGCTACACTCAAAAAGACCAAGTCGGATTCGATTCAAATTAT
CAATGCCTGTGCAGGACAAGATATAGAATTTGGGGTGAAGCTTT-GGCTATCTATAGT----GTTTCATCTTGGCTGGGA
TGATAGATTGATAGGATCGGCTGAATTTATACACTATGCCTGTGATACAAGTGAGGTAGCTCATTCTTTAGCGAAATTTG
CTTATGACGATAATGCTTCTTGTAATT---GGGTCGATGAACCCCCAGCTTTCCTGGTGAATGCCATTGTAAACGATGTA
ACCATATTACCAATTCAATAT-------------------------------------------------------AGTG
GCCATGATGGCATTTCTTAAAAAAA-CATTCTCAAATATATCAGAGCTCATGTAGATTACAACGGACAAAATAAATACAT
ATTGAGATCTCAGTTTCATCCTTCATCCAGAGCCATTGCTCATGACAGCACCCACCAGAACACAAAGTTACAACAGCCAA
CA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------GGCAAGGCCCCCAACTGCTTTGATGCACCTG
TCCTGCTCTTCAGGACAAGTGATTTCGAAGGCAGGGAGACCATGAAGCCTCCTTGATTGATTCCAGCGAGCCTATCATCC
AGCTGCTGTCGGCTGCCTTCTTTTTGGGCGTGAAGAAGTGTCAAACCAAAATACCC
>chr5D_603
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------------------------------------------CGAGTTAATTACACAGAAGTACCACAATTGGGGCATCA
CATGCAGATTGGTATCACGATTGCTAATTTTTGCGTGTCAGTACCAACATTGCTCTAGATTTTTGCAAATAGGTCTAAAC
TGCGTATAAACACGTATTGACGGTGTATCTGACTAGCGGGGCCCGCCCGTCAGGTGCCGACGTGGCATG-TTTT-TTGCA
GAAA------ACCCCCGCCCTCGCCCTCGCCCTCTCGCTCCGCGCCCGCCTCGCCGCCCTCGCCCTCGCCCTCGCCCCGT
GGCGGCCTCCTACCTCAGCCGGCGCGCGCACGACCCCAGCGCGCCGGTGGTGCTGACCCCG-------------------
-------------------CCGGCGAGAG-------------------AGAGAAATGAAATACAACAGAGAGATCGCGCC
GCCGGCGA--GAGAGAGA--GAGAGCCATGAGGAGCGGCGGCAACGTCAAGTCCTTCTTCTGGCAGCAGAAGGCCCACTC
CGGCGCAGCGGCCGCCA---AGCCCACCAGCGGCGTCTCCAAGA---AGCCGGCGCACCACCACCACCAGAAGCAAGCGG
CGGCG---------------CGCCCGACGCCAGGTACGCCGCCGTACGCCCAATCCGAG------------CTCCGCCGA
TTCATACGCCCAACGCGGATTTGACCGATCGATCGATCGATCTGGTGTTTATTTA-----TTTTCAATCTGCTGTTGCTT
TTGCGGCAGATCACGGCGACGGCGCCGACGCG---AGGAG---GGAGGAGGCGGAGAACGCGGAGAGGAAGGCCAGGGAG
TTCGACATGGACATGCGCTACGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAGCGCGCCGCCGCGCTGGGCCT
CGCCCCGCCGCCGCACGCGCTCTGCTCCGACGACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAGACTAGGGCATCG-CCC
CAGGGCCCCG-----------TCGTATCACCGATCC------------------GCCA---CTCCTCGTGGTTCTGCCTA
CTGCTTCTTCTGTAGCCA----------TCAGTCTTCGTGTTGTCTTCAGTC----TTCGTCTGTACGTTTGT-------
---GTCGATCCTGCTGGGTGCGTGC----GATGCCGTGTGATCCGATGCGATGCTGTATTAATC------------TCAG
TATAATCTTTGCTGCATCTG------------------------------------------------------------
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----------------------------------GTGTGTTGC-------------------------------------
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---AAATCTCTCTATATACCATTACAGTTGAGGTTTTTTGAGCAATGTTATTTGGGAATGCACGCG--------------
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-----------------GATGACCCTGATTGAAAATTAGAATGAACGTTCTATATGACC--ACAC-TTGATCCAATACGA
ACGCTCTCAAATCAAATCAGAAGAAAAATGCAGTTTTCTGCTACACTCAATAAGACCAAGTCGGATTCGATTCAAATTAT
CAATGCCTGTGCAGGACAAGATATAGAATTTGGGGTGAAGCTTT-GGCTATCTATAGT----GTTTCATCTTGGCTGGGA
TGATAGATTGATAGGATCGGCTGAATTTATACACTATGCCTGTGATACAAGTGAGGTAGCTCATTCTTTAGCGAAATTTG
CTTATGACGATAATGCTTCTTGTAATT---GGGTCGATGAACCCCCAGCTTTCCTGGTGAATGCCATTGTAAACGATGTA
ACCATATTACCAATTCAATAT-------------------------------------------------------AGTG
GCCATGATGGCATTTCTT--AAAAA-CATTCTCAAATATATCAGAGCTCATGTAGATTACAACGGACAAAATAAATACAT
ATTGAGATCTCAGTTTCATCCTTCATCCAGAGCCATTGCTCATGACAGCACCCACCAGAACACAAAGTTACAACAGCCAA
CA------------------------------------------------------------------------------
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-------------------------------------------------GGCAAGGCCCCCAACTGGTTTGATGCACCTG
TGCTGCTCTTCAGGACAAGTGATTTCGAAGGCAGGGAGACCATGAAGCCTCCTTGATTGATTCCAGCGAGCCTATCATCC
AGCTGCTGTCGGTGC-----------------------------------------
>chr5D_604
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-------------------------------------------GAGTAAATTGCACAGAAGTACCACAATTGAGGCATTG
GAAGCAGATTGATACCAAGTTTGGTAATTTTTACATGTCAGTACCAAGTCTGGGGCTAGACGTTACAAAAAGGTCTAAAT
CGCGTATAAACACATATTGACAGTGTATCTGACTGGCAGGGCCCGCCTGTCAGCTGCTGACGTGGCATTTTTTTTTTGCA
GAACCCCCCTCCCCCCACGGTG------------TCGCTCCGCGCCCGCCTCGCCGCCCTCGCCCTCGCCCTCTCCCCGT
GGCGGCCTCCTACCTCAGCCGGCGCGCGCACGACCCCGGCGCGCCGGTGGTGCTGACCCCG-------------------
-------------------CCGGCGAGAGATCGCGCCGCCGGCGAGAAAGAGAAATGAAATACAACAGAGAGATCGCGCC
GCCGGCGAGAGAGAGAGA--GAGAGCCATGAGGAGCGGCGGCGACGTCAAGTCCTTCTTCCGGCAGCAGAAGGCCCACTC
CGGCGCAGCGGCCGCCA---AGCCCACCAGCGGCGTCTCCAAGA---AGCAAGCGCACCACCACCACCAGAAGCAAGCGG
CGGCG---------------CGCCCGACGCCAGGTACGCCGCCGTACGCCCAATCCGAG------------CTCCGCCGA
TTCATACGCCCAACGCGGATTTGACCGCTCGATCGATCGATCTGGTGTTTATTTA-----TTTTCAATCTGCTGTTGCTT
TTGTGGCAGATCACGGCGATGGCGCCGACGCG---AGGAG---GGAGGAGGCGGAGAACGTGGAGAGGAAGGCCAGGGAG
TTCGACATGGACATGCGCTATGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAGCGCGCCGACGCGCTGGGCCT
CGCCCCGCCGCCGCACGCGCTCTGCTCCGACGACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAGACTAGGGCATCG-CCC
CAGGGCCCCG-----------TCGTATCACCGATCC------------------GCCA---CTCCTCGTGGTTCTGCCTA
CTGCTTCTTCTGTAGCCA----------TCAGTCTTCGTGTTGTCTTCAGTC----TTCGTCTGTACGTTTGT-------
---GTTGATCCTGCTGGGTGCGTGC----GATGCCGTGTGATCCGATGCGATGCTGTATTAATC------------TCAG
TATAATCTTTGCTGCATCTG------------------------------------------------------------
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----------------------------------GTGTGTTGC-------------------------------------
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---AAATCTCTCTATATCCCATTACAGTTGAGGTTTTTTGAGCAATGTTATTTGGGAATGCACGCG--------------
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-----------------GATGACCCTGATTGAAAATTAGAATGAATGTTCTATATGACC--GCAC-TTGATCCAATACGA
ACGCTCTCAAATCAAATCAGAAGAAAAATGCAGTTTTCTGCTACACTCAATAAGACCAAGTCGGATTCGATTCAAATTAT
CAATGCCTATACAGGACAAGATATAGAATTTGGGGTGAAGCTTT-GGCTATCTATAGT----GTTTCATCTTGGCTGGGA
TGATAGATTGATAGGATCGGCTGAATTTATACACTATGCCTGTGATACAAGTGAGGTAGCTCATTCTTTAGCGAAATTTG
CTTATGACGATAATGCTTCTTGTAATT---GGGTTGATGAACCCCCAGCTTTCCTGGTGAATGCCATTGTAAACGATGTA
ACCATATTACCAATTCAATAT-------------------------------------------------------AGTG
GCCATGATGGCATTTCTT-AAAAAA-CATTCTCAAATATATCAGAGCTCATGTAGATTACAACGGACAAAATAAATACAT
ATTGAGATCTCAGTTTCATCCTTCATCCAGAGCCATTGCTCATGACAGCACCCACCAGAACACAAAGTTACAACAGCCAA
CA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------GGCAAGGCCCCCAACTGGTTTGATGCACCTG
TGCTGCTCTTCAGGACAAGTGATTTCGAAGGCAGGGAGACCATGAAGCCTCCTTGATTGATTCCAGCGAGCCTATCATCC
AGCTGCTGTCGGTGC-----------------------------------------
>chr5D_837
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-------------------------------------------------------------GCCCTCGCCCTCTCCCCGT
GGCGGCCTCCTACCTCAGCCGGCGCGCGCACGACCCCAGCGCGCCGGTGGTGCTGACCCCGCCGGCGAGAGATCGCGCCG
CTGGCGAGAGATCGCGCCGCCGGCGAGAG-------------------AGAGAAATGAAATACAACAGAGAGATCGCGCC
GCCGGCGAGAGAGATAGA--GAGAGCCATGAGGAGCGGCGGCGACGTCAAGTCCTTCTTCCGGCAGCGGAAGGCCCACTC
CGGCGCAGCGGCCGCCA---AGCCCACCAGCGGCGTCTCCAAGA---AGCCGGCGCACCACCACCACCAGAAGCAAGCGG
CGGCG---------------CGCCCGACGCCAGGTACGCCGCCGTACGCCCAATTCGAG------------CTCCGCCGA
TTCATACGCCCAACGCGGATTTGACCGCTCGATCGATCGATCTGGTGTTTATTTA-----TTTTCAATCTGCTGTTGCTT
TTGCGGCAGATCACGGCGACGGCGCCGACGCG---AGGAG---GGAGGAGGCGGAGAACGCGGAGAGGAAGGCCAGGGAG
TTCGACATGGACATGCGCTACGGGCCCTGCCTCGGCGTCACCCCCGCCCAGCGCTGGCAGCGCGCCGCCGCGCTGGGCCT
CGCCCCGCCGCCGCACGCGCTCTGCTCCGACGACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAGACTAGGGCATCG-CCC
CAGGGCCCCG-----------TCGTATCACCGATCC------------------GCCA---CTCCTCGTGGTTCTGCCTA
CTGCTTCTTTTGTAGCCA----------TCAGTCTTCGTGTTGTCTTCAGTC----TTCGTCTGTACGTTTGT-------
---GTCGATCTTGCTGGGTGCGTGC----GATGCCGTGTGATCCGATGCGATGCTGTATTAATC------------TCAG
TATAATCTTTGCTGCATCTG------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------GTGTGTTGC-------------------------------------
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---AAATCTCTCTATATCCCATTACAGTTGAGGTTTTTTGAGCAATGTTATTTGGGAATGCACGCG--------------
--------------------------------------------------------------------------------
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-----------------GATGACCCTGATTGAAAATTAGAATGAACGTTCTATATGACC--GCAC-TTGATCCAATACGA
ACGCTCTCAAATCAAATCAGAAGAAAAATGCAGTTTTCTGCTACACTCAATAAGACCAAGTCGGATTCGATTCAAATTAT
CAATGCCTGTGCAGGACAAGATATAGAATTTGGGGTGAAGCTTT-GGCTATCTATAGT----GTTTCATCTTGGCTGGGA
TGATAGATTGATAGGATCGGCTGAATTTATACACTATGCCTGTGATACAAGTGAGGTAGCTCATTCTTTAGCGAAATTTG
CTTATGACGATAATGCTTCTTGTAATT---GGGTCGATGAACCCCCAGCTTTCCTGGTGAATGCCATTGTAAACGATGTA
ACCATATTACCAATTCAATAT-------------------------------------------------------AGTG
GCCATGATGGCATTTCTT-AAAAAAACATTCTCAAATATATCAGAGCTCATGTAGATTACAACGGACAAAATAAATACAT
ATTGAGATCTCAGTTTCATCCTTCATCCAGAGCCATTGCTCATGACAGCACCCACCAGAACACAAAGTTACAACAGCCAA
CA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------GGCAAGGCCCCCAACTGGTTTGATGCACCTG
TCCTGCTCTTCAGGACAAGTGATTTCGAAGGCAGGGAGACCATGAAGCCTCCTTGATTGATTCCAGCGAGCCTATCATCC
AGCTGCTGTCGGTGC-----------------------------------------
>chr1B_956
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----------------------------------------------------------AATACAACAGAGAGATCGCACC
ACCGGGGA----GAGAGAGCGAGAGCCATGAGGAGCGGCGGCGACGTCAAGTCCTTCTTCCGGCAGCAGAAGGCCCACTC
CGGCGCGGCGGCCACCA---AGCCCACCGGCGGCGTCTCCAAGA---AGGCGGCGCACCACCACG---AGAAGCAAGCGG
CGGCG---------------CGCCCGACGCCAGGTACCCCGCCGCACGCCCAATCCCAA------------CCCCGCCGA
TTCGTACGCCCGGCGCGGATTTGACCGCTCGATCGATCGATCTGGTGTTT------TTTTTTTTCAATCTGTTGTTGCAT
CTGCTGCAGACCACGGCGGCGGCGCCGACGCG---GGGAG---GGAGGAGCTGGAGGACGCGGAGAGGAAGGCCAGGGAG
TTCGACATGGACACGCGCTACGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAGCGCGCCGCCGCGCTGGGCCT
CGCCCCGCCGCCGTACGCGCTCTGCTCCGACGACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAGACTAGAGCATCACC-A
CAGGGCCCCG-----------TCGAGTCACCGATCCCCGCCGCCGTCTCCACCCGCCA---CTACTCGTGGTTCTGCGTA
CTGCTTCTTCTGTAGCCTTGTGCCCTCTTCAGTCTCCGTGTTGTCTTCAGTC----TTCCTCTGTACGTTA---------
----------------------TGC----GATGCCGTGTGATCCGATCCGATGCTGTATTAATCGCCGTATTAATCTCAG
TATAACCATTGCTGCATCCG------------------------------------------------------------
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----------------------------------GTGTGTTGC-------------------------------------
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---AAATCTATCTACATCCAATTACAGTCGA-GTTTTTTGACCAATATTAGTTGGGAATGCACGCG--------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------GATAACCCTGATTGAAAATTAGAATGAACGTTCTAT--GACT--ACAC-TTGATCCAATACGA
ACGCTCTCAGATCAAATCAGAAGAAAAATGCAGTTTTCTGCTACACACAATACAATCGAATTGGATTTGATTGAAATTAT
CAATGCCTGTGCAGGGCAAGATATAGGATTTGGGGTGAAGCTTTCGGCTATCTATGTGGAGAGTTTCATCTTGGCTGGGA
TGATAGATTGATAGTATCGGCTGAATTTATGCACTGTGTCGGTGAAACAAGTGAGGTAACCTGTTCTTTAGCGAAATTTG
CTTATGACAATAATGCTTCTTGTAA-T---GGGTCGATGAACCCTCAGGTTTCCTTGTGAATGCCATTGTAAACGATGTA
ACCATATTACCAATTCAATAACCGTATGGGACATGTGGTTAGCAAAATCAGAATTCATATATTACCAATTCAATAAAGTG
GCCATGATGGCATTTCTT-AACAAAATATTGTCAAATATATAAGAGCTCATGTAGATTGCAACAGACAAAATAAATACAT
ATTGAGATCTCAGTTTCGTCCTTCATCTAGAGCCATTGCTCATGACAGCACCCACCAGAACACAAAGTTACAACGGCTGC
CCACATCTTAGCAGATCATAACATGAACGTGAAAAA-TTGCACATTCGTAACTGTTACATCACCAAAGAAAAGAAAAGAA
AAGAAAAATCCACTTCTCCGAATTCTCTCGAGTTTCGCTGCCGAACCTTTGGCACACAAACAAACTCGCTCACAACCACA
TCCACCACCGTGCGAACACTCATCACATAACAGATTTGACATGGTAGGTTGAAGGTATATCATTGGTCCACAGGCTGGCG
AACTAGATGCCGAATATCAAGTCCATCACATTCGTTACAATAGATTTCGCTGGAGCAGCAACGCTGCCTGTTGTACGACG
CCCTGCGTCTCTGATAACGTTTGTGGAGGACTTTGGGTCATATGGGCGCGGCAAGGCTCCCAACTGGTTTGATGCACCTG
TGCTGCTCTTCAGGACAAGTGATTTCGAAGGCAGGGAGACCATGAAGCCTCCTTGCTTGATTCCAGCGAGCCTATCATCC
AGCTGCTG------------------------------------------------
>chr1A_956
--------------------------------------------------------------------------------
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----------------------------------------------------------AATACAACAGAGAGATCGCGCC
GCCGGGGG----GAGAGA--GAGAGCCATGAGGAGCGGCGGCGACGTCAGGTCCTTCTTCCGGCAGCAGAAGGCCCACTC
CGGCGCGGCGGCCACCA---AGCCCACCGGCGGCGTGTCCAAGA---AGGCGGCGCACCACCACC---AGAAGCAAGCGG
CGACG---------------CGCCCGACGCCAGGTACTCCGCCGTACGCCCAATCCCAA------------CTCCGCCGA
TTCGTACGCCCTGCGCGGA-TTGACTGCTCGATCGATCGATCTGGTGTTTATTTGTTTTTTTTTCAATCTGTTGTTGCTT
CTGCGGCAGATCACGGCGGCGGCGCCGACGCG---GGGAG---GGAGGAGGCGGAGGACGCGGAGAGGAAGGCCAGGGAG
TTCGACATGGACATGCGCTACGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAGCGCGCCGCCGCGCTGGGCCT
CGCCCCGCCGCCGCACGCGCTCTGCTCCGACGACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAGACTAGAGCATCGCC-C
CAGGGCCCCG-----------TCGAGTCACCGATCCCCGCCGCTGTCTCCACCTGCCA---TTCCTCGTGGTTCTGCCTA
CTGCTTCTTCTGTAGCCTTGTGGCTTCTTCAGTCTTCCTGTTGTCTTCAGTCGAGTTTCCTCTGTAC-----------TT
TGGGTCGATCCTGCTGGGTGCGTGC----GATGCCTTGTGATCCGACGCGATGATGTATTAATC------------TCAG
TATAATCTTTGCTGCATCTTTTTTTGAGCATAAGTACAGACACAAGCGCTCATATACACGCGCATACACTCACCCTTATA
AACGCACACACACACCCTACCCCTATGAGCACCTCCGAGAGACTGAGCCGGCATATCATCTTGAGATTTACGAAGTCACC
GTAGGCGTCTCGTCGTCGACGGGAACGTCTCCTTCCACTGAAAGCGTATCGCCGGAAATCCTGAAATAAATTCGAAAGAA
GTCCACATCACCCCCTGTGGTTTCAGAAACCGGCTAACCCACCCCCAACTCTGAAACCAGTTAACTAATCCCCTACCAAC
CAAGGCACCCCCTAATCCCAATTAAAGTGGTATCTGCCGATGGTTTTGCTTGCGTGGCTGTACAGGATGGCCACGTCGGC
TTGGTAGGGTGGGTCCGAGACTTAACTGCTCCTCCGATTTGTTTGGGCATCGTCTCCCTTATTTCCTTTCGACGAGACGG
CGGCGGGGCAAGACGGGATGATCGCCGCTTGAAGGTAGCAGCGCGACGACTCCAGAAGTCCAGGTTAGGCGCTCATCTCT
TTCATGCCCAGCACACACGTACTTCTCTGTGTTAACTACAGATTGAAACTTGCACACCTGCAAGGCTGCAACGACCCTTT
CTGAATTTAGATGTCAGACGCCAACTATATAGTCCTCGATCAGTCCGGTGATTAGTACTAACGCACCATAGTTTCACCCG
AGTAGTGTTTGCTGAGTTAATGTGAGAAGTACGTGTGTGCTGGGCATGAAAGAGATGAGCGCCTAACCTGGACTCCTGGA
GTCGTCGCGCTGCTACCTTCAAGCGGCGATCATCCCGCCTTGCCCCGCCGCCGTCTCGTCCAAAGGAAATAAGGGAGACG
ATGCCCAAACAAACCGGAAGAGCAGTTAAGTCTCAGACCCACCCTACCAAGCCGACGTGGCCATCCTGTACAGCCACGCA
AGCAAAACCATCGGCAGATACCACTTTAATTGGGATTAGGGGGTGCCTTGGCTGGTATTAGATATCTCAGGGGATTAGTT
AACTGGTTTCAGAGTTGGGGGGTGGGTTAGCCGGTTTCTGAAACCACAGGGGGTGATGTGGACTTCTTTCAATAAATTCA
GGAATAATGCGAGCACCAGGATTTGAACCCTGATGGGTTAGGGATACCACTGTCCACCTAACCAACTCAACCACAGGTTG
AGTAAATCTATCTAT-TCCCATTACAGTCGA-GTTTTTTGAGCAATATTAGTTGGAAATGCACACG--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GATGACCCTGATTGAAAATTAGACTGAACGTTCTAT--GACCACACTAGTAGATCCAATACGA
ACGCTCTCAAATCAAGTCAGAAGAAAAATGCAGTTTTCTGCCACACTCAATACGAACGACTCGGATTCGATTGAAATTAT
TAATGCTTCTGCAGGACAAGATATAAGATTTGGGGTGAAGCTTTTGGCTATCTATGTGGAGAG-TTCATCTTGGCTGGGA
TGATAGATTGATAGGATCGGCTGAATTTATACACCATGTCTGTCAAACAACTGAGGTAGCTCATTCTTCAGCGAAATTTG
CTTATGACAATAATGCTTCTTGTAA-TACAGGGTCAATGAACCCCCTGCATTCCTGGCGAATGCCATTGTAAACGATGTA
ACCACATTACCAATTCAATAT-------------------------------------------------------AGTG
GCTATGATGGCATTTCTT-AAAAAAATACTGTCAAATATATCAGAGTTCATGTAGATTGCAGCGGACAAAATAAATACTA
ATTGAGATCTCAGTTTCGTCATTCATCCAGAGCCATTGCTCATGACAGCACCCACAAGAACACAAAGTTACAACAGCCGC
CCACATCTTAGCAGATCATAACATAAACGTGAAAATTTTGCACATTCATAACTGTTACATCACCAAAGAAAAGAAAAGG-
--------TCCACTTCTCCGGATTCTCTCAAATTTCGCTCCCGAACCCTTTGGCGG---ACAAACTCACTTGCTACAGCA
TCAATCACCGTGACAG-----ATCACACAACAGATGAGACATGCTAGGCTGGAGGTATATCATTGGTCCACAGGCTGGCG
AACTAGATGCCGAATATCAAGTCCATCACATTGGTTACAATAGATTTCGCTGGCGCGGCGACACTGCCTGTTGTACGACG
CCCTGCGTCTCTGATAACGTTTGTGGAAGACTTCGGATCATACGGGCGCGGCAAGGCTCCCAACTGGTTTGATGCTCCTG
TGTTGCTCTTCAGGACAAGTGATTTCGAAGGAAGGGAGACCATGAAGCCTCCTTGGTTGATTCCAGCGAGCCTATCATCC
AGCTGCTGCCGGTGC-----------------------------------------
>chr1D_956
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------AATACAACAGAGAGATCGCACC
ACCGGGGAGAGAGAGAGA--GAGAGACATGAGGAGCGGCGGCGACGTCAAGTCCTTCTTCCGGCAGCAGAAGGCCCACTC
CGGCGCGGCGGCCACCA---AGCCCACCGGCGGCGTCTCCAAGA---AGGCGGCGCACCACCACC---AGAAGCAAGCGG
CGGCG---------------CGCCCGACGCCAGGTACGCCGCCGTACGCCCAATCCCAA------------CTCCGCCGA
TTCGTACGCCCGGCGCGGA-TCGACTGGTCGATCTG-------GTGTTTTTTTTA-----TTTTCAACCTGTTGTTGCTT
CTGCGGCAGATCACGGCGGCGGCGCCGACGCG---GGGAG---GGAGGACGCGGAGGACGCGGAGAGGAAGGCCAGGGAG
TTCGACATGGACATGCGCTACGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAGCGCGCCGCCGCGCTGGGCCT
CGCCCCGCCGCCGCACGCGCTCTGCTCCGACGACCAGCCGTGCATCTGGGAGGGCCGCGTCTAGACTAGAGCATCACCCC
CAGGGCCCCG-----------TCGAATCACCGATCC------------------GCCA---CTCCTCGTGGTTCTGTCTA
CTGCTTCTTCTGTATCATTGTGGCCTCTTCAGTCTTCGTGTTGTCTTCAGTC----TTCGTCTGTACGTTTG--------
----------------GGTGCGTGC----TATGCCTTGTGATCCGATGAGATGCTGTATTAATC------------CCAG
TTTAACCTTCGGTGCATCTG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GTGTGTTGTGC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CAATCTATATCCCACTACGATTGA-TTGTTTTGAGCATTATTAGTTGGGAATACATGCGGCATGTATATCTGA
TGATATTTCTGTCAACTTGTTGGATGAACTTTCTTTGGAACTTGTTGGATGAACTTTCTATGATCATCGGGAATGCTATT
CAGCAAACATTTGCTGGGGGAGTGACATTTGCGAACGTTTTTCACGGCAATTATGTTGTACAGAGCATCGCAATTTCTTT
AAGCAAACACAACAAATTTTTAAAGCAAATTCTTGCTTTGCCAGAAATCGTCAGAGTTTCTGACGTTTTTGCAGGAAAAA
AGATTCGCAAATACGAACGTCCCCTCACTATAGGGGTCCATGATTATTGTCTTGAATGCATCCAGCGTAAGGAAGCTCGT
CTCCAGGAATGCACGCCGATGACCCTGATTGAAAATTAGAATGAACGTTCTAT--TACTGCACTC-TAGATCCAATACAA
ACGATTTCAAATCAAATCAGAAGAAAAATGCCGTTTTCTGTTAAGCTAATTGTTGTCAAA--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------TCAAATATATAAGACCTCATGTAGATTGTAACGGACAAAATAAATACAT
ATTGAGATCTCAGGTTCAGCCTTCGT--------ATAGGTCATGATAGTACCCACCAGCACACAAAGTTACAGCAGCTGC
CCACATCTTAGCAGATCATAACATGAACGTGAAAAAC-TGCACATTCATAACTGTTACATCACCAAAGAAAAGAAAAGAA
AAA-----TCAACTTCTCCGGATTCTCTCGAGTTTCGCTGCCGAACCTTTGGCACACAAACAAACTCGCTCACAACCACA
TCCACCACCATGCGAACACTCATCACATAACAGATTTGACATGGTAGGTCTAAGGTATATCATTGGTCCACAGGCTGGCG
AACTAGATGCCGAATATCAAGTCCATCACATTCGTTACAATAGATTTCGCTGGCGCGGCAACGCTGCCTGTTGTACGACG
CCCTGCGTCTCTGATAACGTTTGTGGAAGACTTCGGATCATACGGGCGCGGCAAGGCTCCCAACTGGTTTGATGCACCTG
TGCTGCTCTTCAGGACAAGTGATTTCGAAGGCAGTGAGACCATGAAGCCTCCTTGATTAATTCCAGCGAGCCTATCATCC
AGCTGCTGCCGGTGC-----------------------------------------
>chr2A_992
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----------------GA--GAGAGCCATGAGGAGCGGCGGCGACGTCAAATCCTTCTTCCGGCAGCAGAAGGCCCACTC
CGGCGCGGCGGCCGCCACCAAGCCCGCCGGCGGCGTCTCCAAGA---AGGCGGCGCACCACCACC---AGAAGCAAGCGG
CGGCGGCGGCGCATCTCCTCCGCCCGATACGAGGTATGCCGCCGCATGCCCAATCCCACGCAGTCGCCGTCCGATCCC--
-------------AGCGGA-TTGACTGATCGATCTATCGATCTGTTTTTTTTTTC-----TTTAATTCTT-TGGCTGCAG
CTGCGGCAGATCACCGCGACGGCGCTGACGCGGCGAGGAG---GGAGGAGGAGGAGGACGCGGAGAGGACGGCCCGGTAG
TTCGACATGGACACGCGCTACGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAACGCGCCGCCGCGCTCGGCCT
CGCCCCGCCGCCGCACGCGCCCTGCTCCGACCACCAGCCGTGCCTCTGGGAAGGCCGCGTCTAGAGCGTCGCATCGCC-C
TGCGGCCAAAGGCCCATCGAATCGAATCGTCGATCC------------------GCGCCACCTCCTCGTGGTTCTACCAA
CTGCTT--------------------------TCTTCGTGTTGTCTTCAGTC----TTCCTCTGTACGTCTGTCTGCCTC
TGGATCGATGCTGCTGCGTGCGTGTGATGGATGCCTTGTGATCCGG--------TGTGTTATTT------------TAAG
CTTAATCTTTGCTGCATCCG------------------------------------------------------------
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----------------------------------GTGTGCTG--------------------------------------
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>chr2D_992
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----------------GA--GAGAGCCATGAGGAGCGGCGGCGACGTCAAATCCTTCTTCCGGCAGCAGAAGGCCCACTC
CGGCGCGGCGGCGGCCACCAAACCCGCCGGCGGCGTCTCCAAGAAGCAGGCGGCGCACCACCACC---AGAAGCAGGCGT
CGGCGGCG---CATCTCCTCCACCCGGCACGAGGTATGCCGCCGCATGCCCAAATCCCA------------CGATCCC--
-------------CGCGGA-TTGACTGATCGATCGATC----TGGTATTC------TCTTTTTA-----T-TTGCTGCAG
CTGCGGTGGATCACCGCGGCGGCGCTGACGGG---ACGAGCGAGGAGAAGGAGGAGGACGCGGAGAGGAAGGCCCGGGAG
TTCGACACGGACGTGCGCTACGGGCCCTGCCTCGGCCTCACCCGCGCC------------------GCCGCGCTCGGGCT
CGCCTCGCCGCCGCACGCGCTCTGCTCCGACCACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAGAGCGTCGCATCGCC-C
TGCGGCCAAAGGCCCACTGAATCGAATCGTCGATCCGCG---------CCACCTGCCG---CTCCTCGTGGTTCTACCGA
CTGCTT--------------------------TCTTCGTGTTGTCTTCAGTC----TTCCTCTGTACGTCTTTCTGGGTC
TGGATCGATGCTGCTGCTTGCGTGTGATGGATGCCTTGTGATCCGGTGCCATGCTGTATTATTT------------TCAG
CTTAATCTTTGCTGCATCTG------------------------------------------------------------
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----------------------------------GTGTGCTGAGC-----------------------------------
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-------CAATCTACATCCCATTAC-------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------
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-----------S---------------------S----------------------------------------------
------------------------------------------------------------------------------S-
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-S------------------------------------------------------------------------------
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----------------------------------------------------------------------S---------
----------------S---------------------------------------------------------------
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--------------------------------------------------S-----------------------------
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------------------S-------------------------------------------------------------
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------------------------------------------------------------------S-------------
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------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_594
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--------------GCTTGTGGAGAGGGCATTCT----------------------------------------------
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>reverse_4584
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-----------------------TTGGGCGTGAAGAAGTGTCA-------------
