>input_sequence_79073
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-----------------------ATGGCTTCGCAGGCGATCGAGGAGCACCGGTCGGGCGCGGAGGTGCACACGGAGCTG
TGCGAGGCCAGGGCCCGCGAGTTCCTCGTCGAGCTGGGCCTCCCCGACGGGCTCCTCCCGCTGCCGTCCCTCGTGGAGGT
GGGCTACAACCGCGCCACCGGCTTCGTGTGGCTCCGCCAGGGCCAGTCCGGCGGCCTCACCCACACCTTCGACGCCATCG
GCAAGCAGGTCTGGTACGCGCCCGAGGTGACGGCCGTGGTGGAGCGCGGCCGGATGCACAGCATGACCGGGGTCAAGAGC
AAGGAGCTGCTCATCTGGGTCACCATCTCCGAGATCGTCATCAGCCCCTCCGGCTCCAAGATCGTCTTCCGCACCCCCGC
CGGCCTCGGCCGCGCCTTCCCCGTCTCCGCCTTCCAGCTCAACCCGCCGGCGCCCGAGGCCGAGGCCAAGGCCGCCGAGG
AGGCCGCCGCCAACTGA---------------------------------------------------------------
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>chr7A_1_TraesCS7A01G346000
GCAGACTCCCCCGCGCCAGCACTGCCTGCGCCGGCACAGCCCTACATGACGGCGCTCTGGAATACGGCGTTCGCCTGGGC
CGGGCCGACGCCAACGCTCATCGACCTCACGGACCTCGAGGACGACGACGCCTAGGGCAGCGCGCCGCCTCGTAGTTTAG
GCCGTCTTTATTTTTTTTAAATGCAAATGTGAACGCGTGGACTCTCGCCGGCCTTCGTGGCCGGCTTTAATGTTTAATTA
ATATTGTTTCTCTTTTTTAATATACACGCATTCATTTCTTTCTAGCGCTATCAAAATGGGTTCAGATCAGTGTTGGGCAC
ACATGTCAACCCAAACGTGAAAGCGTACATCCGTGTTCGTTGGCCGATCCAAACAGACAAAAAAGAACAAAACTGCCGTC
CGTTTGGGTCGCTCCGTTGGAATTGCTCTTACTGCCTTCCGCGTGAACCGACAGGCAGTCACCGTGCCGCAACGACGTCT
GTGCTGAATCCTTATCCGATGAGGAGCAAGCAGACGAGAACCCCGTCCGTCCTCGAAGAAAAAACTAAGGCCACTTGCCC
TGGCCTACGACCATAATACTCGCAACTGTGCGTGTGGTTGGGGCCGTTGGGATCTGCTGCCCATTTCGTGTCAACTACGG
TGCAAAACATTATGACGATTGATGTATGTACTACTACTAATGACGAATACTCCTAGAAAACCAACTGCGCGACTGATATA
GCACCAACGGCGAT------------------------------------------------------------------
--------------------------------------------------------------TGACGAGCGAGAGGCGTC
CACCGTCCTCTCTGGGTCTGGCTGGGATGGCACCCGATTCCCCAACATAAAATTCCGGGTGACAGCGCGTGGACAGGAAC
CAATCCCCTTCTCAA-CCCCGAACCCAAGCGGCCAACCAAACGCGCATAAAAGCAGCCCCCCGATCTCCTCCAACGGCAG
CAGAGAACGCGTCGCACTCG----CAAGAAACAGAGCCCAGCAAGGAAAGCAAAACCAACCCCGGCGAG----------A
GAAGGAACCCCCGACATCCGGCGATGGCTTCGCAGGCGATCGAGGAGCACCGGTCGGGCGCGGAGGTGCACACGGAGCTG
TGCGAGGCCAGGGCCCGCGAGTTCCTCGTCGAGCTGGGCCTCCCCGACGGGCTCCTCCCGCTGCCGTCCCTCGTGGAGGT
GGGCTACAACCGCGCCACCGGCTTCGTGTGGCTCCGCCAGGGCCAGTCCGGCGGCCTCACCCACACCTTCGACGCCATCG
GCAAGCAGGTCTGGTACGCGCCCGAGGTGACGGCCGTGGTGGAGCGCGGCCGGATGCACAGCATGACCGGGGTCAAGAGC
AAGGAGCTGCTCATCTGGGTCACCATCTCCGAGATCGTCATCAGCCCCTCCGGCTCCAAGATCGTCTTCCGCACCCCCGC
CGGCCTCGGCCGCGCCTTCCCCGTCTCCGCCTTCCAGCTCAACCCGCCGGCGCCCGAGGCCGAGGCCAAGGCCGCCGAGG
AGGCCGCCGCCAACTGATCGATCTGCTCGCGAGTCAAGTCAGCGGTAAGCGGTTAGATTTGGTCGCCAGATCCGGTGCTC
ATCGCGGTGTCGCTGTGCCAACTTG--TGCCAGTCCGTGGCTTTCTTCTTGTGTATCACTATCAGCTCAGTGGCCGGTGT
GCTGCCGACGGATGGCGCTGAAATAAG-CTTGTGCTCTTGTATGATTTGAGATCTGAGTTGGTTGGTACTGTGTTCTACT
AGTATTCTTGTTTCAA-------------------------TTAGATGCATTTCTGCCGCTTTTGAAACTAGATCTGTGA
ACT---GCTGCTGCTGTGCGACCTGTAATGTCATCATCTTTCT--------------ATAATGTCACCATCTTAAGGTGT
GATCTCGAGTATGATCTATAGTAGAATGAGTGGAGTGAATGGACTGGAACTGGCTCCTCTAACTTCGCTCCCGTGAAGTT
AGGGAAACAGTACCCTAACTTAGTCTGTGAACCATCAGATGGGAAATAGATGGCCAAGATTCTGCACTGTTCATATGGGG
TTGTAGTATACTGTTTGGACGAGCACTGTAGCTAAAATCACTGTTTGTTACCTGTAGCAATTGACACTGTTTAAGAACTG
TAGCGATAGATCTCAGCCATTTATTCTAGACCCAACGGATGAAATGTGGCTAAGTTAGGCTCCTAACTTCACAATAGCTA
AGTTAGAGGAGCCGGTTCCGCATAGTCCATACTCGAGATCACACCTTAAGATGATGACATTATAGATCCCTAACCTCACT
GATCCCGGTTGTTTTTGACCTTAGGCATTTTTAGGAGTGGATTTGATGATGTGGCACGGTGTGGCAGGGATTTTGACTTT
TGACCAAATAAATGAGTGCTATGTCAGCACTCAACACGGGTGTCGTTTTCTTCCCCGCGAGCAGTGGCTTGGCCTTTGCC
GCTGATGAGGTCTCCTATTACAGGTATGGTCAAGGACCTATCATTTGGGACCCGCATGGGGCCCATAACCAACGTGTGTA
GGTCCCTGGATCATACCAGTAT
>chr7B_428
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---------------------------CTTACTGCCTTCCGTGTGAAC-GACAGGCAGATATCGTGCCGCAATGACGTCT
GTGCTGAATCCTTATCCGTTGAGGAGCAAGCAGACAAGAACCCCGTCCTTGAA-GAAAAAAAAAACAAAGCCACTTGCCC
TGTCCTACGACCATAATACTCCCAACTGTGCGTGTGGTTGGGGCCGTTGG-ATCTGCAGCCCATTCGGTGTCAACTACAG
TGCAAATCATTAAAT-----------------------------------------TAAACCAACTGTGCGACTGATGAC
TTTCCCGGCCTCCACCAACAAGTTCTGAATGGCTAGCGTCTTCGCCCTGACGGCGCTTCTGTGATTTCCATCTTAATACG
AAG--CTACCCGAAAACTGTACCCTCCATTGAGATGTCATACTAACAAAACCGAGCTACTGATGACGAGAGAGAGACGTC
AAACGTACCCTTTGCCTT----TGGGATGGCACCCGATTCCCCAACATAA--TTCCGGCTGACAGCGCGGGGACGGGAAT
CAATCCCCTTCTCAACTCCCGAACCCAAGTGGGCAGCCAAACGCACATAAAAGCAGG-CCCCGATCTCCTCCTC---CAA
CAGAGAACGCGTCGCACTCGCTTCCAAGAAACAGAGCCCAGCAAGGAAAGCAAAACCAAGCCGGCGAGAGAGAAAACCAA
GAAGAAACCCCCGACATCCGGCGATGGCTTCGCAGGCGATCGAGGAGCACCGGTCGGGCGCGGATGTGCACACGGAGCTG
TGCGAGGCCAGGGCCCGCGAGTTCCTGGTGGAACTGGGCCTCCCCGACGGGCTCCTCCCTCTGCCGTCCCTCGTGGAGGT
GGGCTACAACCGCGCCACCGGCTTCGTGTGGCTCCGCCAGGGCCAGTCCGGCGGCCTCACCCACACCTTCGACGCCATCG
GCAAGCAGGTCTGGTACGCCCCCGAGGTGACGGCCGTGGTGGAGCGCGGCCGGATGCACAGCATGACCGGGGTCAAGAGC
AAGGAGCTGCTCATCTGGGTCACCATCTCCGAGATCGTCATCAGCCCCTCCGGCTCCAAGATCGTCTTCCGCACCCCCGC
CGGCCTCGGTCGGGCCTTCCCCGTCTCCGCCTTCCAGCTCAGCCCGCCGGCGCCCGAGGGCGAGGCCAAGGCCGCCGAGG
AGGCCGCCGCCAACTGATCGATCTGCTCGCGAGTCAAGTCAGCGGTAAGCTGTTAGATTTGGTCGCCAGATCCGGTGGTC
ATCGCGGTGTCGCTGTGCCAACTTG--TGCCTGTCCGTGGCTTTCTTCTTGTGTATCACTATCGGTTCAGTGGCCGGTGT
GGTGCCGACGGATGGCGCAGAAATAAGCCTTGTGCTCTTGTATGATTTGAGATCTGAGTTGGTTG---------------
----------TTACTGTCTGCTACTAGTATTCTTGTTTCAGTTCGATGCATTTCTGCCGCTTTTCAAACTAGATCTGTTA
ACT---GCTGCTGCTGTGCGACCTGTAATGTCATCATCTTTCT--------------ATTATGTCATCATCTTAAGGTGT
GATCTCGAGTTTGATCTA--------------------------------------------------------------
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>chr7D_553
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------------------------------------------------------------------------ACTTGCCC
TGGCCTACGACCATAATACTCGCAACTGTGCATGTGGTTGGGGCCGTTGG-ATCTGCAGCCCATTCCGTGTCAACTACAG
TGCAAAACATTAAAT-----------------------------------------AAAACCAACGGTGTGAGTGATGAC
TTTCCCGGCCTCAACCCACAAGTTCTGAATGGCTAGCGTCTTCGCGCTGACGGCGCTTCTGTGATTTCCATCTTCCATCT
TAATACTACCCGAAAACTGTACACTGCATTGAGATGGCATACCAGCAAAACCGAGCTACTGATGACGAGAGAGAGACGTC
CAACGTACCCTTTGTCTT----TGGGATGGCACCCGATTCCCCAACATAA--TTCCGGCTGACAGCGCGGGGACGGGAAT
CAATCCCCTTCTCAACCCCCGAACCCAAGTGGGCAACCAAACGCGCATAAAAGCAG-CCCCCGATCTCCTCCAA---CAG
CAGAGAACGCGTCGCACTCGCAAC----AAACAGAGCCCAGCAAGGAAAGCAAAACCAAACCGGCG--------------
--AGAAACCCCCGACATCCGGCGATGGCTTCGCAGGCGATCGAGGAGCACCGGTCGGGCGCGGATGTGCACACGGAGCTG
TGCGAGGCCAGGGCCCGCGAGTTCCTGGTGGAGCTGGGCCTCCCCGACGGGCTCCTCCCGCTGCCGTCCCTCGTGGAGGT
GGGCTACAACCGCGCCACGGGGTTCGTGTGGCTCCGCCAGGGCCAGTCCGGCGGCCTCACCCACACCTTCAACGCCATCG
GCAAGCAGGTCTGGTACGCCCCCGAGGTGACGGCCGTGGTGGAGCGCGGCCGGATGCACAGCATGACCGGGGTCAAGAGC
AAGGAGCTGCTCATCTGGGTCACCATCTCCGAGATCGTCATCAGCCCCTCCGGCTCCAAGATCGTCTTCCGCACCCCTGC
CGGCCTCGGCCGCGCCTTCCCCGTCTCCGCCTTCCAGCTCAGCCCGCCGGCGACGGAGGGCGACGCCAAGGCCGCCGAGG
AGGCCGCCGCCAACTGATCGATCTGCGCGCAAGTCAAGTCAACGGTAAGCAGTTTA----GGTCGCCAGATCCGGTGGTC
ATCGCGGTGTCGCTGTGCCTGCCAACTTGTCAGTCCATGGCTTTCCTCT--TGTATCACTATCAGTTCAGTGGCCGGTGT
GGTGCCAATGGTTGGCGCAGAAATAAGCCTTGTGCTCTTGTATGATTTGAGATCTGAGTTGGTTG---------------
----------TTTCAA-------------------------TTCGATGCATTTCTGCCGCTTTTGAAACTAGATCTGTTA
ACTGCGGCTGCTGCTGTGCGACCTGTAATGTCATCATCTTTTTTTCTTTTGAACACAATAATGTCATCATCTTAAGGTGT
GATCTCGAGTTTGATCTA--------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S------S---------SS-S----------S-------
------------------S----------------S------------S-SSSS---S------SS--S-----------
--------------------------------------------------S------S-------S------------S-
------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S---------SSS
SSS--SSSSSSS-S------------------------------------------------------------------
---------------------------------------------------------------------S-----S----
--S---S-S--S--SS-SSSSS----------------------------SS------S----------S----S----S
-----------------------------S--S-----------------------S-----------------SSS---
-----------------------------------------------------------S--S-SSSSS-----------
----S-----------------------------------------------------------S---------------
--------------------------S--S--------------------------------------------------
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-------------------S------------------------------------------------------------
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-----------------------------------------S-----------------S--------------------
--------------------------------------------------S--------------------------S--
-----------------------------------------------------------------S--------------
-S----------------S----------------------------------------------SSSSSSSSSSSSSSS
SSSSSSSSSS---------------------------------S----------------------------------S-
------------------------------------------------------------------S-------------
----------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS
>forward_331
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-----------------------------------------------------------------------GTTGGGCAC
ACATGTCAACC---------------------------------------------------------------------
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>reverse_2052
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---------------------------------------------------GGCTCCTCTAACTTCGCTCC---------
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