>input_sequence_79051
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----------------------------------------------------ATGACGGGACAACAAATACTGAATGTCG
ATGCATCCTACTCAAAAGACGATTTCACAGGAGCTTGTGGAGCTGTTCTTCGCGATAACAGAGGAGGCTTCATCTGTGCA
GCTATGGCGAGACTTGACCACGTCCCAGATGTGGTTTCAGCAGAAGCAACAGCACTGTTGGAGGGACTAAAACTAGCACA
GAGCACTGGCTGCAACAATCTTTTAGTACGTATGGACAACCTGATAGTGGTGCAAGCGCTACATAATAATGAAGGACACT
C-GATGATGGCGGCTCCTATTTTGCAAGATTGTCGAGTGATGTTGAGAGAATTCGGGAAGGCTGTGGTAGAACATTGTAT
AAGAGAGTCTAATATGGTTGCGCACGAGCTAGCTCAGTGGGGCGGTGCCAATACTCCTACCTTTTGGGTGGAGGCTCCGC
CGGATTTCCTTTTTAAATTTTTAGCTGATGATGTAACTGTCATTTGA---------------------------------
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>chr4A_1_TraesCS4A01G022300
GACTCTCTCTGTGCAAAGGTTTTGAGATCAAGGTACTATCCCACAGGTGATATTCTAAATTGCGAGTTGAAAAGGG-TTC
ATCTTTCGTATGGCAAAGTATATGGGCGGGAATTCAAACTTTCAAGAAGGGTAGTATATGGAAAGTTGGAGATGGAGCAA
AAATAAATATTTGGGGTGATTGCTGGATACCGAATAGCTCTTCAAGGAAAATAGTGACAGTTCGGGCGAATCAAGTGCTT
ACTAGAGTTCATGAATTAATAGA-CCCAGTCTCGGGGGAATGGGA--TGAACTGCTTATTCGTGATAATTTCTGGCCTAT
TGATGTGGACCACATTCTTCAAATCCCAATCCATTATCAGGAGACGGAATACTACATCGCGTGGCACATCATGAAGAGTG
GCGTTTT-----TACGGTAAGGTCAACATATTATAAACAATGGGAAGTGTGTTATGCGGCAACCTTGGGTGCACTTCAGT
CAGGTGGATCTT-CATCACATCCGGTGTGGAAAAGATTATGGAACCTTAAGCTACCAGGGAAGATCAAAAAATTTCTATG
GAGGTGTTTGCACAATGCTATCCCATGTCTTTGTGTCCTTGCAAACCGCCATATTGGCAGTAACTCTCAGTGTCCAGTAT
GTTCTTCGGGAGCAGAAGACATAATGCATGCCCTTTTTAAATGCCCCCAAGTAATGCAAATTTGGGAAGCTCTTGGAATA
GCAAAGGAAGTAGC-GGATGCGACGCTAGTGGATCGTGCTGGTTCAACATTGATTGAATTTATGCTATGTGATCAAGACT
CTCAGCGCATGTATATGGACCCAGTTGAACTTCCAGAGTTGTTTGCAACGGCATGTTGGTACATATGGTGGCAACGTAGG
CAATTGGTCCGGGGTGAGCAAGTTCAGTGTCCAGTTCGGACTGCTCCAGCAATCTACGCTTTAACCTTGAATTTTGTTAG
AGGAAAAGGGATTTTGA-CCAAGTTCCACGTATAAACAGATGGTCTCCTGGCATGACGGGACAACAAATACTGAATGTCG
ATGCATCCTACTCAAAAGACGATTTCACAGGAGCTTGTGGAGCTGTTCTTCGCGATAACAGAGGAGGCTTCATCTGTGCA
GCTATGGCGAGACTTGACCACGTCCCAGATGTGGTTTCAGCAGAAGCAACAGCACTGTTGGAGGGACTAAAACTAGCACA
GAGCACTGGCTGCAACAATCTTTTAGTACGTATGGACAACCTGATAGTGGTGCAAGCGCTACATAATAATGAAGGACACT
C-GATGATGGCGGCTCCTATTTTGCAAGATTGTCGAGTGATGTTGAGAGAATTCGGGAAGGCTGTGGTAGAACATTGTAT
AAGAGAGTCTAATATGGTTGCGCACGAGCTAGCTCAGTGGGGCGGTGCCAATACTCCTACCTTTTGGGTGGAGGCTCCGC
CGGATTTCCTTTTTAAATTTTTAGCTGATGATGTAACTGTCATTTGAGTCTTAATAAAGCTAGCCATGGTGGCCTTTCGT
AAAAAAAAGGCCAACTAGTCGGGAGTGAATCATTCAAGAGAATAGTTTAATAATAAGTTTAGACACGCTTTCTATTGCAG
GCTGATTTGTAGAAAAACGTGTTT-------AAAAAAATGAGATCAACACTTAAAAGCTCACAGATTTGAAAATAAAACA
TGAACTAAAAGAAGTTCATGTAATAAAGAAAGTTCGTG------------------AATTAGAAAAAAGTTCATCGATTT
TTAAAAAATCATAAA-----------------------------------------------------------------
----------------------------------------TTTGAAAAAAGTTCATCAGTTCTGAAAAATGTTCGCAATT
TTTTAAAAAGTTCATTGATTTTGGCCAAAAATCAATGGTTTGAAAAGAGTTCACGGATTTTGAAAATTTTCATTGAATAT
GAAAAAATAGTTAACCGATTTGAAAAAAAATCATCAATTTTTTTTAAAAGTCACCAATTTGAAAGGAATTCATCGATTTT
GGAATTATTTTTGTGCATATTTGAACAAAAGTTCATGGTGGGAAAAATGGTTCATGAAATTTTAAGAAAAATGTTCATGA
ATTTGTGAATAATCCACGCATCAATGAAAAAAGAAAAAGGAAAATGATAAAAAGGAAAATCAAATAAAAAACGTCCAAAA
GAAAACCAGGAACTGAAGAAGGAATAAAAGAGTGAAAAAGAAAGTGTTTCGCAATGACTGCGATGGTGTGGTGGTTCGTT
TGAGCAGAGTGGTCGGGAGTACGAAGTTGCTTGCTTCACATTTTTTACGGGTCTTAGTCTGTTTGCCTCCTCTTCTTGGA
GAGGCGTGTCTTGCCACATCATTCTTCGGTCGTAATTTAGCTCTTTTTTTTGCATGTGTCTATTATGGCTGGCTTGCTAT
GCGTTTTACCTAAGCTGGGTCGACATTTAATATGCTCATGCCGCTGATTATGGTTGTATTGTTATTTCTCTTTATCGTTA
TAGTCTTACTTGGTGCATGTGTATGGTCTTCGTGGTGAATAAAGGTGTCGGGTCATG
>chr3D_1
GACTCTCTCTGTGCAAAGGTTTTGAGATCAAGGTACTATCCCACGGGTGATATTCTAAATTGCGAGTTGAAAAAGGGCTC
ATCTTTCGTATGGGAAAGTATATGGGCGGGAATTCAAACTTTCAAGAAGGGTAGTATATGGAGAGTTGGAGATGGAGCAG
AGATAAATATTTGGGATGATTGCTCGATACCGAATAGCTCTTCAAGGAAAATAGTGACAGTTCGGGCGAATCAAGTGATT
ACTAAAGTTCATGAATTAATAGA-CCCAGTCTCGGGGGAATGGGAGATGAACTGCTTATTCGTGAGAATTTCTGGCCTAT
TGATGTGGACCGCATTCTTCAAATCCCAATCCATCATCAGGAGACGGAAGACTACATCGCGTGGCACCTCACGAAGAGTG
GCGTTTT-----TACGGTACGGTCGGCATATTATAAACAGTGGGAAGTGTGTTATGCGGCAACCCTGGGTGCACTTCAGT
CATGTGGATCTT-CATCACATCCGGTGTGGAAAAGATTATGGAACCTCAAGCTACCAGGGAAGATAATTTTTTTTCTATG
GAGGTGTTTGCACAATGCTATCCCATGTCTTTATGTCCTTGCAAACCGCCATATTTGCAGTAACTCTCTGTGTCCAGTAT
GTTCTTCGGGAGCAGAAGACATAATGCATGCCCTTTTTAAATGCCCCCGAGTAATGCAAATTTGGGAAGCTCTTGGAATA
ACAAAGGAAGTAGC-GGATGCAGCGCCAGTGGATCGTGCTGGTTCAACATTGATTGAATTTATGCTATGTGATCAAGCCT
CTCAGCGCATGTATATGGACCCAGTTGAACTACCAGAGTTGTTTGCAACGGCATGTTGGTACATATGGTGGCAACGCAGA
CAATTGGTCCGGGGTGAACAAGTTCAGTGTCCAGTTCAGACTGCTCCAACAATATACGCTTTAACCTTGAATATTGTTAG
AGCAAGAGCGATTTTGACCCATGTTCCACGTAGAAACAGATGGTCTCCTGGCATGACCGGACAGCAAATACTGAATGTCG
ACGCATCCTACTCAGAAGACGATTTCACAGAAGCTTGTGGAGTTGTGCTTCGCGATAACAGAGGAGGCTTCATCAGGGCA
GCTACGGCGAGACTGGACCACGTCCCAGATGTGGTTTCAGCAGAAGCAACAGCGCTGTTGGAGGGACTAAAACTAGCACA
GAGCACTGGATGCAACAATCTTTTAGTACATATGGACAACCTGATAGTGGTGCAGGCGCTAAATAATAATGAAGGACACA
C-GATGGTGGCGGCTCCTATTTTGCAAGATTGT-GAGTGATGTTGAGAGAATTCGGGAAGGCTGTGGTAGAACATTGTAT
TAGAGAGTCTAATATGGTTGCGCATGAGCTAGCTCAGTGGGGCGGTGCCAATACTCCTACCTTTTGGGTGGAGGCTCCGC
CGGATTTCCTCATTAAATTTTTAGCTGATGATGTAAGTCTCATTTGAGTTTTAATAAAGCTAGCCATGATGGCCTTCT--
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------------------------------------------------------------------------GTCCAAAA
AAAA----------------------------------------------------------------------------
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>chr7A_1
GACTCTATCTGTGCAAAGGTTTTGAGATCAAGGTACTATCCCACGGGTGATATTCTAAATTGCGAGTTGAAAAAGGGCTC
ATCTTTCGTATGGCAAAGTATATGGGTGGGAATTCAAACTTTCAAGAAGGGTAGTATATAGAGAGTTGGAGATGGAGCAA
AAATAAATATTTGGGATGATTGCTGGATACCGAATAGCTCTTCAAGGAAAATAGTGACAGTTCGGGCGAATCAAGTGCTT
ACTAAAGTTCATGAATTAATAGA-CCCAGTCTCGGGGGAATG---GATGAACTGCTTATTCGTGAGAATTTCTGGCCTAT
TGATGTGGACCGCATTCTTCAAATCCCAATCCATCATCAGGAGATGGAAATCTACATCACATGGCACCTCACGAAGAGTG
GCGTTTT-----TACGGTACGGTCAGCTTATTATAAGCAGTGGGAAGTGTGTTATGCGACAACCCCGGGTGCACTTCAGT
CAGGTGGATCTT-CATCACATCCGGGGTGGAAAAGATTATGGAACCTCAAGCTACCAGGGAAGATCAAAAAATGTCCATG
GAGGTGTTTGCACAATGCTATCCCATGTCTTTGTGTCCTTGCAAACCGCCATATTGGCAGTAACTCTCAGCGTCCAGTAT
GTTCTTCGGGAGCAGAAGACATAATGCATGCCCTTTTTAAATGCCCCCGAGTAATGCAAATTTGGGAAGCCCTTGGAATA
GCAAAGGAAGTAGC-GGATGCAACGCTAGTGGATCATGCTGGTTCAACATTGATTGAATTTATGCTATGTGATCAAGCCT
CTCAGCACATGTATATGGACCCAGTTAAACTACCAGAGTTGTTTGCAACAGCATGTTGGTACATATGGTGGCAACGCAGG
CAATTGGTCCGGGGTGAACAAGTTCAGTGTCCAATTCAGACTGCTCCAGCAAAATACGCTTTAACCTTGAATTTTGTTAG
AGCAAGAGGAATTTTGACCCAAGTTCCACATGCAAACAGATGGTCTCCTGGCATGACC-GACAGCAAATACTGAATGTCG
ACGCATCCTACTCAGAAGACGATTTCACAGGAGCTTGTGGAGCTGTGCTTCGCGATAACAGAGGAGGCTTCATCAGGGCA
GCTACAGCAAGACTTGACCATGTCCCAGATGTGGTTTCAGCAGAAGCAGCAGCGCTATTGGAGGGACTAAAACTAGCACA
GAGCACTGGATGCAACAATCTTTTAGTACGTATGGACAACCTGATAGTGGTGCAGGCGCTACATAATAATGAAGGACACT
CTGATGGTGGCGGCTCCTATTTTGCAAGATTGTCGAGTGATGTTGAGAGAACTCAGGAAGGCTGTGGTAGAACATTGTAT
TAGAGAGTCTAATATGGTTGCCCATGACCTAGCTCAGTGGGGCGGTGCCAATACTCCTACCTTTTGGGTGGAGGTTCCGC
CGGATTTCCTCTTTAAATTTTTAGCTGATGATGTAAGTGTCATTTGAGTTTTAATAAAGCTAGTGATGATGGCCTTCTCG
TCAAAAAAAA----------------------------------------------------------------------
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>chr3B_1
GACTCTCTCTGTGCAAAGGTTTTGAGATCAAGGTACTATCCCACGGGTGATATTCTAAATTGCGAGTTGAAAAAGGGCTC
ATCTTTCGTATGGCACAATATATGGGCAGGAATTCAAATTTTCAAGAAGGGTAGTATATGGAGAGTTGGAGATGGAGCAA
AAATAAATATTTGGGATGATTGCTGGATATCGAGTAGCTCTTCAAGGAAAATAGTGACAGTTCGGGCGAATCAAGTGCTT
ACGAGAGTTCATGAATTAATAGA-CCCAATCTCGGGGGAATGG--GATGAACTGCTTATTCGTGAGAATTTCTGGCCTAT
TGATGCGGACCGCATTCTTCAAATCCCAATCCATCATTAGGAGATGGAAGACTACATCGCGTGGCATCTCACGAAGAGTT
GCGTTTT-----TACGGTACGATCAGCATATTATAAACAGTGGGAAGTGTGTTATGCGGCAACCCCGGGTGCACTTCAGT
CAGGTGGATCTT-CATCACATCCGGTGTGGAAAAGATTATGGAACC-CAAGCTACCAGGGAAGATAAAAATTTTTCTATG
GAGGTGTTTGCACAATGCTATCCCATGTCTTTGTGTCCTTGCAAACCGCCATATTGGCATTAACTCTCAATGTCCAGTAT
GTTCTTCGGGAGCAGAAGACATAATGCATGCCCTTTTTAAATGCCCCCGAGTAATGCAAATTTGGGAAGCTCTTGGAATA
GCAAAGGAAGTAGC-GGATGCAGCGCTAGTGGATTGTGCTGGTTCAACATTGATTGAATTTATGCTATGTGATCAAGCCT
CTCAGCGCATATATAGGGACCCAGTTGAACTACCAGAGTTGTTTGCAATGGCATGTTGGTACATATGGTGGCAACGCAGA
CAATTGGTCCCGGGTGAACAAGTTTAGTGTCCAGTTCGGACTGCTCCAGCAATATACGCTTTAACCTTGAATTTTGTTAG
AGCAAGAGGGATTTTGACCCAAGTTCCACGTACAAATAGATGGTCTCCTGGCATGATGGGACAACAAATACTGCATGTTG
ACGCATCCTACTCAGAAGACAATTTCAC-AGAGCTTGTGGAGCAGTGCTTCGTGATAACAGAGGAGGCTTCATCAGGGCA
GCTACGGCGAGACTTGACCACGTCCCAGATGTGGTTTCAGCAGAAGCAGCATCGCTGTTGGAGGGACTAAAACTAACACA
GAGCGCTGGATGCAACAATCTTTTAGTACGTATGGACAACCTGATAGTGGTGCAGGCGCTACATAATAATGAAGGACACT
C-GATGGTGGCGGCTCTTATTTTGCAAGATTGCCGAGTGATGTTGAGATAATTCGGGAAGGCTGTGGTAGAACATTGTAT
TAGAGAGTCTAATATGGTTGCACATGAGCTAGCTCAGTGGGGTGGTGCCAATACTCCTATCTTTTGGCTGGAGGCTCCGC
CGGATTTCCTCTTTAAATTTTTAGCTGATGATGTAAGTGTCATTTGAGTTTTAATAAAGCTACCCATGATGGCCTTCCTG
TCAAAAAAA-----------------------------------------------------------------------
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---------------------------------------------------------
>chr3D_2
-ACTCTCTTTGTGCAAAGGTCTTGAGATCAGGGTACTATCCCACGGGTGATATTCTAAACTGTGAGTTGAAAAAGGGCTC
ATCTTTCATATGGCAAAGTATATGGGCGGGAATTCATACTTTCAAAAAGGGTAGTATATGGAGAGTTGGAGATGGAGCAA
AAATAAATATTTGGGATGATTGTTGGATTCCGAATAGCTCTTCAAGGAAAATAGTGACAGTTTGGGCGAATCAAGTGCTT
ACTAGAGCACATGAATTAAAAGA-CCCAGTCTCCGAGGAATGG--GATGAACTGCTTATCGGTGATAACTTTTGGCCTAT
TGATGTGGACCACATTCTCCAAATCCCAATCCATCACTAGGAGACGGAAGACTACATCGCATGGCACATCACGAAGAATG
GCATTTT-----TACGC-----TCAGCACATTATAAACAGTGGGAAGTGTGTTATGCGGTAAACCCTGGTGCACTTCAGT
CAGGTGGATCTT-CCTCACACCCGGTATGGAAAAGATTATGGAATCTCAAGCTACCAGGGAAGGTCAAATTTTTTCTATG
GAGGTGTTTACACAATGCTATTCCGTGTCTTTGTGTCCTCGCAAACCGCCATAGTGGCAGTAACTCTCAGTGTCCAGTAT
GTTCTTCGGGAGCAGAAGACATAATGCATTCCCTTCTTAAATGCCCCCGAGCAATGCAAATTTGGGAAGCTCTTGGACTA
GCAAAGGTAGTGGC-GGATGCCACACTAGGGGATCTTGCTCATTCAACTTTGATTGAATTTATGCTATGTGATCAAGCCT
C-------------------------------------------------------------------------------
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>chr3B_15
--------------AAAGGTCTTGAGATCAGGGTACTATCCCATGGGTGATATA--------TGAGTTGAAGAAGGGCTC
ATCTTTCGTATGGCAAAGTATATGGGCAGGAATTCAAACTTTCG-AAAGGGTAGTATATGGAGAGTGGGAGATGGAGCAT
AAATAAATATTTCGGATGATTGTTGGATTCCGAATAGCTCTTCAAGGAAAATAGTGACAATTTGGGAAAGTCAAGTGCTT
ACTAGAGCACATGACTTAAAAGA-GC-AATCTCTTAGGAATGG--GATGAACTAGTTATCGGTGATAAATTTTGGCCTAT
TGATGTGGACCACATTCTCCAAATCCCAATCCATCACGAGGAGACAGAAGACTACATTGCATGGCACCTTACAAAGAACG
ATGTTTTTATGGTACGT-----TCAACACATTATAAATAGTTGGAAGTGTGTTATGCGGCAACCCCTAGTGCACTTCAGT
CAGGTGGATCTT-CCCCATACCCTGTATGGAAAAGAGTATGGAATATCAAGCTACGAGGGAAGATCAAAAAAATTCTATG
AAGGTGTTTGTACAACGCTATTCCGTGTCTTTGTGTCCTCGCAAACCGCCATATTGGCAGTAACTCTTAGTGTCCAATAT
GTTCTTC-GGAGCAGAAGAAATAATGCATGCCCTTCTTAAATGCCCCTGAGTAATGCAAATTTGGGAATCTCTTTGACTA
GCAATGGTAGTGGC-GGATGCCACGCTAGGGTATCGTGCTCATTCAACTTTGATTGAATTTATGCTATGTGATCAAGCCT
CTCCGCGCATGTATATGGACCCAGCTGAAGTACCAGAGTTGTTTGTGATGGTGTGCTGGTACATATGGTGACAGCGCAGG
CAATGGGTCCATGGTGAACAAGTTAAGTGCCCAGTTCAGAGTGCTCTAGCAATATACCCTTTAACCTTGAATTTTGTTAG
AGCAAGAGGGAATACGTCACAAGTTCCACGGACCAACAAATGGTCTCCTGGCATGACTAGACAACAAATATTGAATGTCG
ACGCGTCCTACTCAAAAGACGACTTCACGGGAGCTTGTGGTGCTATGCTTTGCAATAACCGAGGAGGTTTCATCAGGGCA
GCTACGGCGAGACTTGACCATGTTCCAGATGCGGTTCT---AGAAGCAGCAACACTGTTGTAGGGAATAAAACAAGCACA
TAGCACTGGATGCAACAATCTTTTAGTTCGTATGGACAACCTGATAGTGGTGGAGGCGCTACATAATAATGAGGGACAAT
C-GATGGTGGCAGCTCCTATTTTGCAAGATTGTCGAGAGATGTTGTGAGAATTCGGGAAGGTTGTGGTAGAACATTGTAT
TAGAGAGTCTAATATGGTTGCGCATGAGCTAGCTCTGTGGGGCGTTGTCAATACTCCTACTTTTTGGGTGGAGGCTCCGC
CAGATTTTCTCTTTAACTTTTTAGCTGATGATGCAAGTGTCATTTGAGTTTTAATAAAGCTAGCTATGATGGCTTTCCGG
TCAAAAAA------------------------------------------------------------------------
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---------------------------------------------------------
>chr7A_19
------------------GTTTTGAGATCAAGGTACTATCCCACGGGTGATATTCTAAATTGCGAGTTGAAAAATGGTTC
ATCTTTTGTATGGCAAAGTATATGGGCGGGAATTTAAACTTTCAAGAAGGGTAGTATATGGAGAGTTGGAGATGGAGCAA
AAATAAATATTTGGGATGATTGCTGGATACCGAATAGCTCTTCAAGGAAAATAGTGACAGTTCGGGCGAATCAAGTGCTT
ACTAGAGTTCATGAATTAATAGA-CCCAGTCTCGGGGGAATGG--GATGAACTGCTTATTCGTGATAATTTCTGGCCTAT
TGATGTGGACCGCATTCTTCAAATCCCAATCCATCATCAGGAAAGGGAAGACTACATCGCGTGGCACCTCACGAAGAGTG
GCGTTTT-----TACGGTAAGGTCAGCATATTATAAACAGTGGGAAGTGTGTTATGCGGCAACCTTGGGTGCACTTCAGT
CAGGTGGATCTT-CATCACATCCGGTGTGGAAAAGATTATGGAACCTTAAGCTACCAGGGAAGATCAAAAAATTTCTATG
GAGGTGTTTGCACAATGCCATCCCATGTCTTTGTGTCCTTGCAAACCGACATATTGGCAGTAACTCTCAGTGTCCAGTAT
GTTCTTCAGGAGCAGAAGATATAATGCACGCCCTTTTTAAATGCCCCCGAGTAATGAAAAATTGGGAAGCTCTTGGAATA
GCAAAGGAAGTAGC-GGATGCAACGCTAGTGGATCGTGATGGTTCAACATTGATTGAATTTATGCTATGTGATCAAGACT
CTCAGCGCATGTATATGGACCCAGTTGAACTACCAGAGTTGTTTGCAACGGCATGTTGGTACATATGTTGGCAACGCAGG
CAATTGGTCCGGGGTGAGCAAGTTCAGTGTCCAGTTCGGACTGCTCCAGCAATCTAGGCTTTAACCTTGAATTTTGTTAG
AGCAAAAGGGATTTTGACCCAAGTTCCACGTACAAACAGATGGTCTCCTGGCATGACGAGACAGCAAATACTGAATGTCG
ACGCATCCTACTCAGAAGACGATTTCACAAGAGCTTGTGGAGCTGTTCTTCGCGATAACAGAGGAGCCTTCATCTGTGAA
GCTACGGCGAGACTTGACCACGTCCAAGATGTGGTTTCAGCAGAAGCAGCAGCATTGTTGGAGGGACTAAAACTAGCACA
GAGCACTGGATGCAACAATCTTTTAGTACGTATGGATAACCTTGATAGGGG-----------------------------
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---------------------------------------------------------
>chr5B_125
--------------------------------------------------------------------------------
---------------------------------------------GAAAGGTAGTATATGGAGAGTTGGGGACGGAGCAA
ACTTAAACATTTGGAATAATTGCTGGATTTCGAATTGCTCTTCAAGGAAAATAGTGACAGTTCGGGTGAATCAAGTGCTT
ACTAGTGTTCATGAATTAATAGA-CC-AGTCTCGGGGAAATGA--GATGAAGTGCTTATTCGTGAGAATTTCTGGCCTAT
TGGTGTGGACCGCCTTTTTCGAATCCCAATCCATCATCAGGAGACGGAAGACTACATAGCATGGCACCTCACGAAGAGTG
TCCTTTT-----TACAATACGGTCATCATATTATAAACAGTCAGAAGTGTGTTATGCAGCAACTGTTGGTGCACTTCAGT
CAGGTGGATCTT-CATCATATCCAGTATGGAAAAGATTATGAAATCTAAAGCTACCAGGGAATATCA-AAAAATTCTATG
CAGGTGTTTACACAATGCTATTCCGTGTCTTTGTGTCCTTGCAAACCGCCATATTGGCAGTAACTCTCAGTGTCCAGTAT
GTTCTTCGGGAGCAGAAGACATAATGCATGCCCTCTTTAAATGCCCCCGATTAATGCAAATTTAGGAAGCTCTTGGAATA
GGAAAGTTAGTGGCAGGATGTCACGCTAGTGGATCATGTTGGTTCAACACTGGTTGAATTTATGCTATGTGATCAAGCCT
CTAGGCGCATGTATATGGACCCAGTTGAATTACCAGAGTTGTTTGCGACGGCGTGTTGGTACATATGGTGGCAGCGCAGA
CAATTTGTCCGTGGTGAACCAGCTAAGTGTCCAGTTCAGACTGCTCTTG-----TACGCTTTAACCTTGAATTTTGTTAG
AGCAAGAGGGAATATGGCCCAAGTTCCACGTACAAACAGATGGTCTAGTGGCATGACGGGAC-----ATACTGAATGTTC
ACGCGCCCTACTTAGAAGATGATTTCACAGGAGCTTGTGGTGTTGTGCTTCGCAATAAC-GAGGAGGCTTCATCAGGGCA
AGTACAGCGAGACTTGACCACGTCCCAGATGTGGTTTCAGCAGAAGCAGCAACTCTGTTGGAGGGACTAAAACTAGCACA
GAGCACTGTATGCAACAATCTTTTAGTACATATGGACAATCTGATAGTGGTAGAGACGCTACATAATAATGAAGGACACT
C-AATGCTGGCAGCTCCTATTTTGCAAGACTGTCGAGAGATGTAGAGAGAATCCAGGAAAGCTGTGGTAGAACATTATAT
TATAGAATCTAGTATGATTGCGCATGAGCGAGCTCAGCGGGGTGGTGCCAATACTCCTGTTTTTTGGGTGGAGGCTCTGC
CAGATTTCTTCTTTAAATTTTTAGCTGATGATGTAGATGTTATTTGAGTTTTAATAAAGCCAGCCATGCTGGCCTTCTCG
TAAAAAAA------------------------------------------------------------------------
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---------------------------------------------------------
>chr1D_140
GA------------------------------------------------------------------------------
-------------------------------------------------------------AGAGTTGGAGATGGAGCAA
AAATAAATATTTGGGATGATTGTTGGATACCGAATAGCTCTTCAAGGAAAATAGTGACAATTCGGGCGAATCAAGTGCTT
ACTAGAGTTCATGAATTAATATACCC-AGTCTCGGGGGAATGG--GATGAACTGCTTATTCATGAGAATTTCTGGCCTAT
TGCTGTGGACCGCATTCTTCAAATCCCAATCCATCATCAGGAGACGGAAGACTACATCACGTGGCACCTCACGAAGAGTG
GCGTTTT-----TACGGTACGGTCGGCATATTGTAAACAGTGGGAAGTGTGTTATGCGGCAACCCCGGGTGCACTTCAGT
CAGTTGGATCTTTCATCATATCCGGTGTGGAAAAGATTATGGAACCTCAAGCTATCAGGGAAGATCAAATTTTTTCTATG
AAGGTGTTTCCACAATGCTATCCCATGTCTTTGTGTCCTTGCAAACCGCCATATTGGCAACAACTCTCAGTGTCCAGTAT
GTTCTTCAGGA---------------------------------------------------------------------
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>chr3B_621
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------TGTCCAGTAT
GTTCTTCGGGAGCAGAAGACATAATGCATGCCCTTTTTAAATGCCCCCGAGTAATGCAAATTTGGGAAGCTTTTGGAATA
ACAAAGGAAGTAGC-GGATGCAGCGCTAGTGGATCGTGATGGTTCAACATTGATTGAATTTATGCTATGTGATCAAGCCT
CTCAGCGCATGTATATGGACCCAGTTGAACTACTAGAGTTGTTAGCAACGGCATGTTGGTACATATGATGGCAACGCAGG
CAATTGGTCTGGGGTGAACAAGTTCAGTGTCCAGTTCGGACTGCTCCAGCAATATACGCTTTAACCTTGAATTTTGTTAG
AGCAAGAGGGATTTTGACCCAAGTTCCACGTACAAATAGATGGTCTCCTGACATGACGGGACAACAAATACTGCATGTCG
ACGCATCCTACTCAGAAGACGATTTCACATGAGCTTGTGGAGCTGTGCTTCGCGATAACAGAGGAGGCTTCATCAGGGCA
GCTACGGCGAGACTTGACCACATTCCAGATGTGGTTTCAGCAGAAGCAGCAGCGCTGTTGGAGGGACTAAAACTAGCACA
GAGCGCTGGATACAACAATCTTTTAGTACGTATGGACAACCTAATAGTGGTGCAGGCGCTACATAATAATGAAGGACAGT
C-GATGGTGGCGGCTCCTATTTTGCAAGATTGTCGAGTGATGTTGAGAGAATTCGGGAAGGCTGTGGTAGAACATTGTAT
TAGAGAGTCTAATATGATTGCGCATGAGCTAGCTCAGTGGGGTGGTGCCAATACTCCTACCTTTTGGACGGAGGCTCCGC
CGGATTTCCTCTTTAAATTTTTAGCTGATGATGTAAGTGTCAATTGAGTTTTAATAAAGCTAGTCAGTATGGCCTTTCTG
TCAAAAAAA-----------------------------------------------------------------------
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---------------------------------------------------------
>chr5D_680
--------------------------------------------------------------------------------
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-------------------------------------------------AGTAATGCAAATTTGGGAAGCTCTTGGAATA
GCAAAGGAAGTAGC-GGATGCAGCGCTAGTGGATTGTGCTGGTTCAACATTGATTGAATTTATGCTATGTGATCAAGCCT
CTCAGCGTATGTATATGGACCCAGTTGAACTACCAGAGTTGTTTGCAACGGCATGTTGGTACATATGGTGGCAACGCAGG
CAATTAGTCCG-GGTGAACAAGTTCAGTGTCCAGCTTGGACTGCTCCAGCAATATACGCTTTAACCTTGAATTTTGTTAG
AGCAAGAGGGATTTTGACCCAAGTTCCACATACAAACAGATGGTCTCCTGGCATGACGGGACAACAAATACTGAATGTCG
ACGCATCCTACTCAGAAGACGATTTCACAGGAGCTTGTGGAGCTGTGCTTCGCGATAACAGAGGAGGCTTCATCAGGGCA
GCTACGGCGAGACTTGACCACGTCCCATATGTGGTTTCAGCAGAAGCAGCAGCGCTGTTGGAGGGACTAAAACTAGCACA
GAGCACTGGATGCAACAATCTTTTAGTATGTATGGACAACCTGATAGTGGTGCAGGCGCTACATAGTAATGAAGGACACT
C-GGTGGTGGCGGCTCCTATTTTGCAAGATTGTCGAGTGATGTTGAGAGAATTCGGGAAGGCTGTGGTAGAACATTGTAT
TAGAAAGTCTAATATGGTTGCGCATGAGCTAGCGCAGTGGGGCGGTGCCAATGCTCCTGCCTTTTGGGTGGAGGCTCTGC
CGGATTTCCTCTTTAAATTTTTAGCTGATGATGTAAGTGTCATTTGGGTTTTAATAAAGCTAGCCATAATGGTCTTTCCG
TTAAAAAAAA----------------------------------------------------------------------
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---------------------------------------------------------
>chr4D_754
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------CAACATTGATTGAATTTATGCTGTGTGATCAAGCCT
CTCAGCGCATGTATATGGACCCAGTTGAACTACCAGAGTTGTTTGCAACGACATGTTGGTACATATGGTGGCAATGCAGG
CAATTGGTCCGGGGTGAACAAGTTCAGTGCCCAGTTCCGACTGCTCCAGCAATATACGCTTTAACCTTGAATTTTGTTAG
AGCAAGAGGGATTTTGACCCAAGTCCCATGTACAAACATATGGTCTCCTGGCCTGACCGGACAGCAAATACTGAATGTCG
ATGCATCCTACTCAGAAGACGATTTCACAGGAGCTTGTGGAGCTGTGCTTCGCGATAACAGAGGAGGCTACATCAAGGCA
GCTACGGCGAGACTTGACCACGTCCCAGATGTGGTTTCAGCAGAAGCAGCAGCGCTGTTGGAGGGACT-AAACTAGCACA
GAGCACTGGATGCAACAATCTTTTAGTACGTATGGACAACCTGATAGTGGTGCAGGCGCTACATAATAATGAAGGACACT
C-GATGGTGGCGGCTCCTATTTTGCAAGATTGTTGAGTGATGTTGAGAGAATTCAGGAAGGCTGTGGTAGAACTTTGTAT
TAGAGAGTCTAATATGGTTGCACATGAGCTAGCTCAGTGGGGCGGTGCCAATACTCCTACCTTTTGGGTGTAGGCTCTGC
CGGATTTCCTCTTTAAATTTTTAGCTGATGATGTAAGTGTCATTTGAGTTTTAATAAAGCTAGCCATGATGGCCTTTCCG
TAAAAAAAACACCAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr4D_754
--------------------------------------------------------------------------------
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--------------------------------------------CAACATTGATTGAATTTATGCTATGTGATCAAGCCT
CTCAACGCATGTATATGGACCCAGTTGAACTACCAGAGTTGTTTGCAACGACATGTTGGTACATATGGTGGCAACGCAGG
CAATTGGTCCGGGGTGAACAAGTTCAGTGCCCAGTTCCGACTGCTCCAGCAATATACGCTTTAACCTTGAATTTTGTTAG
AGCAAGAGGGAATTTGACCCAAGTCCCATGTACAAACATATGGTCTCCTGGCCTGACCGGACAGCAAATACTGAATGTCG
ATGCATCCTACTTAGAAGACGATTTCACAGGAGCTTGTGGAGCTGTGCTTCGCGATAACAGAGGAGGCTACATCAAGGCA
GCTACGGCGAGACTTGACCACGTCCCAGATGTGGTTTCAGCAGAAGCAGCAGCGCTGTTGGAGGGACT-AAACTAGCACA
GAGCACTGGATGCAACAATCTTTTAGTACGTATGGACAACCTGATAGTGGTGCAGGCGCTACATAATAATGAAGGACACT
C-GATGGTGGCGGCTCCTATTTTGCAAGATTATCGAGTGATGTTGAGAGAATTCAGGAAGGCTGTGGTAGAACTTTGTAT
TAGAGAGTCTAATATGGTTGCACATGAGCTAGCTCAGTGGGGCGGTGCCAATACTCCTACCTTTTGGGTGGAGGCTTCAC
CGGATTTCCTCTTTAAATTTTTAGCTGATGATGTAAGTGTCATTTGAGTTTGTAAAAAA---------------------
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>chr4D_1512
AAC-----------------------------------------------------------------------------
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-------AGGCCAACTAGTCGGGAGTGAATCATTCAAGCGAATAGTTTAAGAATAAGTTTAGACGCGCTTTCTATTGCAG
ACTGATTTGTAGAAAAACGTGATTGTTTTGAAAAAAAATGAGATAAAAACTTAAAAGCTCACAGATTTGAAAACAAAACA
CGAACTAAAAGAAGTTCATGTAATCAAAAAAGTTCATGAATTCAAAAAAGTTCACAAATTAGGAAAAAGTTCATTGATTT
TCAAAAAAGTTCACAAATTTTCAAAAAAGGTTCATTGATTTTGAAAAACAGTTCATCAATTTTCAAAAAAGTTCATCGAT
TTTAAAAAAAAATCCCAAATTTTAAAAAAAGATCATCGACTTTGAAAAAAGGTCATCAATTCTGAAAAAGGTTCACAAAT
TTTTAAAAAGTTCATCGATTTTGGTCAAAAATCAATGATTTGAAAAGACTTCATGGATTTTGAAAAAGTTCATTGAATAC
GAAAAAATAGTTAACCAATTTGAAAAAAGTTCATC---TTTTTTTAAAAGTCACCAATTTGAAAAGAATTCATCGATTTT
GGATTTTTT----TGCATATTCGAATAAAAGTTCATGGTGGAAAAAATGGTTCATGAAATTTTAAGAAAAATGTTCATGA
ATTTGTGAATAATCCACACATTAATGAAAAAAGAAAAAGTAAAATGATAAAAAGGAATTG--AATAAAAAACGTCCAAAA
GAAATCCAAGAACTGAAGAAGGAATAAAAGAGTGAAAAAGAAAGTGTTTCACATCGATTGTGATGGCGTGGTGGTTCGTT
TGAGCGGAGTGGTCGGGAGTTCGAAGCTGCTTGCTTCACATTTTTTATGGGTTTTAGTATGTTTGCCTCCTCTTCTTGGA
GAGGCGTGTCTTGCCACGTCATTCTTCGGTCGTAATTTAGCTCTTTTTT--GCATGTGTCTATTATGGCTGGCTTGCTAT
GCGTTTTACCTAAGCTGGGTCGGCATTTAATATGGTCATGCCGCTGATTATGGTTGTATTGTTATTTCTCTTTATCGATA
TAGTCTTACTTGTTGCAGGCGTATGGTCTTCGTGGTGAATAAAGGTGTTGGGT----
>SNPs
--------------------------------------------S----------------------------S------
--------------------------------------------------------------S-----------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S--------------S---------------------S--------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
---------------------S----------------------------------------------------------
-------------------------------S--------------------------------------------S---
--------------------------------------------------------------------------------
--S-----------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
---------S--------------------------------------------S-------------------------
------S-------------------------------------------------------------------------
S-----------------------S-------------------------------------------------------
----------S-------------------------S------------S------------------S----------S
S-------------------------------------S-----------S-------------S---------------
S--------------------S----------------------S--S-------------------------S------
S-----------------------S--S-------S--------------------------S-----------S-----
-S------SSSS-S------------------------------------------------------------------
---------------------------------------------------S------S----------S----S---S-
---------------S--------S------------S----------S----S------------SS-----------S
----------------S-----------SS-----SSS--------------------------S---------------
---S--S--SSSS--------S---S---------------S--------------------------------------
-----------------S---S-----------------S-----------------SSSSS------------------
----S---S-----------------------------------------S--SS--S--S-----S-------------
-----S--------------S-----S--------------------S----S-----S---------------------
-----------------S-------------------------------SS-----------------------------
----------------------S-----------S------------------------------------------S--
------------S----S-S----------------------------S----SSSS
>forward_392
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------TACATCGCGTGGCACATCAT--------
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>reverse_2326
--------------------------------------------------------------------------------
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-----AGAGTGGTCGGGAGTACGAA-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
