>input_sequence_79029
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---------------------------------------------------ATGAGATCCTCCCTGGCCCTGCTCCT---
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--------------------------------------CCTTCTCGGAGCAGCCATCGCCCCTATCCTCGCAACGGGTGT
CTCCCCTGCCGTCAACACAAGCGTGCTCTCGCCTGGCCCGACGGCCGGCTCCGCGAACGACACGCTGCAGCGCGG--CAT
CATCGCCACCAACCAGATCGCGCATAACGTGACGGCCACGCTGGGCATCATCTCCGACCTGGTGCGCGATCTCAACACCT
GCACCAGACTCTACATGACCATGGCCAAGGAGGTGGCCGCCGCCCTGGACGACCTTCACGCCGGACGCGTCGACAACGCG
GCCGATAAGCTGAACGACGCCGTGGGTGCGCCTAGTGACTGCGACATTGTGCTGATGGGCATTGGAGAGATCGAGAAGGT
CCCTCGTGATCCCATTGAAAGCGAGAATGACGAGAACGATCGACTAATCCAATTAGCCATCGACATCTTGGACCCGCCGA
GTAGCTAG------------------------------------------------------------------------
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-------------------------------
>chr1D_1_TraesCS1D01G424000
GAACTGGTGTTGCATGACCTTGTATGTAAAGCACATGGGGTGGGTAGCTCCTCGGACCCAAGTTGTAGCATGTCGGACGT
C-GGATGTCATCACGATCCGATGGCGTGTATAATCGCACGAGTCGTTATTCTTGGCTAGTCAAGCCAGGTATCCCGCCTG
TCCAATAGGTGGGAGCTCCCTGAATCCGTAAATCGATTGGGATGGGGCGATCGGCTTCAAACTAACTTTGTCCACAGATC
ATATGTTTTCCGAGGTGGAAGTTGACCTTTCCCGTGACGTTGGGGTATTTCGTGAGGATTGTTATGCCCACCTGCTGTCC
TATCTCAGCCCCAAGGAGGGCAGTCATGCTTCTTGGCCCATTCGCGCTATAACAGTATGCTGACGTCAACCTCCACGTCA
AATGTTGGAAGTAGG-TTTTTTCACAGGTAATATTGGTTGGTCTCTGCGAGTCTATTCCTTTGGCACGGTAGATTTGGAA
GATTTATTTACCAGATTGATTTTTATTAACACAATACAGACGCAAGCGCTCGTCAACCTCCACG-TCAAATGCTGAAAAT
AGGTTTTTTCGCAGGTAATATTGGTTGGTCTCTGCGAGTCTATTGCTTTGGCACGGTAGATTTTT---------------
-----------TTAACACAGTACAA-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------ACAGGTTGGTTCGAGCACTTATCCGGATTGA
TATGAAGCATTATTTCATGACAGCTTTTCCAAGTTTGCAAAATCTTGCATATTTTGGGGAGGATTAATGACG--------
-------AGAATCCATCAGCACCATAATGTTGATTAACGACCTCAAATAAAGGGAAATTGCCTAAGACAGAAACAGTACA
---------------------ATGTTCTTCAAAAGGAAGTATATCATATC------------------------------
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--------------------------------------ATAATGAACAAATCCCGTTCATGCAGGATTGCATTACCTTCT
--TTTCTAA-AATATAAAAGGCTCATCCGCTAGT-------ATAAATCCCAGAGGATACACGACTTGGAACGACGCCGCC
GATGAACCTCGCCGCCGTTGAACTTGAACCT-CGCACATAACATCAC---CATGAGATCCTCCCTGGCCCTGCTCCT---
--------------------------------------------------------------------------------
--------------------------------------CCTTCTCGGAGCAGCCATCGCCCCTATCCTCGCAACGGGTGT
CTCCCCTGCCGTCAACACAAGCGTGCTCTCGCCTGGCCCGACGGCCGGCTCCGCGAACGACACGCTGCAGCGCGG--CAT
CATCGCCACCAACCAGATCGCGCATAACGTGACGGCCACGCTGGGCATCATCTCCGACCTGGTGCGCGATCTCAACACCT
GCACCAGACTCTACATGACCATGGCCAAGGAGGTGGCCGCCGCCCTGGACGACCTTCACGCCGGACGCGTCGACAACGCG
GCCGATAAGCTGAACGACGCCGTGGGTGCGCCTAGTGACTGCGACATTGTGCTGATGGGCATTGGAGAGATCGAGAAGGT
CCCTCGTGATCCCATTGAAAGCGAGAATGACGAGAACGATCGACTAATCCAATTAGCCATCGACATCTTGGACCCGCCGA
GTAGCTAGAAGGAT---G--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GATTGTATGCATGGGCGGCCAAATAAA
TTGGATGTTTCTTCCATGGAAAAGTGTTCGTTTCAATCGGCTGATTTCACAGCTTGTAAACCGCGTCCTGCGCGCACCAC
GTGTCCTGTGCGCACCACGTGTCCTGTGCGGGACCACCACCACTCCATCCCAGCCTTATCTACTCGCTGTGTGTTTTCTC
CACCCGTTTTCTTCTTTTCCCCTTTTCATCCTCACGCGACACTGCTAGA--------GAAGAGGCCATCGATCCCATGGC
GAGCACCACCAACCAA--------GGAACCAGAAGTGGCTGCCGCCGCCGACCTTATAATGCTACTCTGCCCCAACACCA
CCCTTGTTGCAAACATAGGGCGAAGCAGCCACCCTACTGTCATAACT--CAAGAGTC--GTAGCCGCCATTGATGCAAGC
AAGCGAAGGTCGACACCGACAATGCTACGACGCGGTTGCGGCAAGGTCG-GGGGGAGGGCATCTCTGGCCAGCACGGCTG
TAAGGTTCCCGCTCGCCACTCTCACTCCATGCTGCAATCCATGTG-TTTTGCAGCAGCACCATTGCTGTGACGGGCCATC
TCCCTCAACTCCGGCCGTCGTCAC-CGGCGGTGCTGCGTTGCAACACGACCA--GCTACTAGTGGAAGAGGCTGCGGTGT
CGCGGCCGCTGCATCGCAGCTCTGGCGGCGTTGACGAGCACTGCATGTCAGCTTCGCAGCGTCATGGCCGCTGCATCGCA
ACTCCGGCGGCGTCAGCAACCGCTGCATCGCAGCTCCGGCGGTCGACGACCGCTGCATCGCACCTCCGGTGGCGTCGGCG
ACCGCTGCATCGCAGCTCCGGCGGCGTCGGCGACCGCTGCATCGCAGCTCTGCGTCATCATGGCCGCTGCATCGCAGCTC
CGGTGGCATCGGCGTCCGCTTCATCGTAGCTCCGGCGGCTGCTGCATCACAACTCCGGCGCCTACAAGGCCGCTGCTGCC
GTGCTGGGCATGCTTGGAGCGGACAGTGGGC
>chr1D_1
GAACTGGTGTTGCATGACCTTGTATGTAAAGCACATGGGGTGGGTAGCTCCCCGGACCCAAGTTGTAGCATGTCGGACGT
C-GGATGTCATCACGATCCAATGGCGTGTATAATCGCACGAGTCGTTATTCTTGGCTAGTCAAGCCAGGTATCCCGCCTG
TCCAATAGGTGGGAGCTCCCTGAATCCGTAAATCGATTAGGATGGGGCGGTCGGCTTCAAACTAACTTTGTCCACAGATC
ATATGTTTTCCGAGGTGGAAGTTGACCTTTCCCGTGACGTTGGGGTATTTCGTGAGGATTGTTATGCCCACCTGCTGTCC
TATCTCAGCCCCAAGGAGGGCAGTCATGCTTCTTGGCCCATTCGCGCTATGACTGTATGCTGCCGTCAACCTCCACGTCA
AATGTTGGAAGTAGG-TTTTTTCACAGGTAATATTGGTTGGTCTCTGCGAGTCTATTCCTTTGGCACGGTAGATTTGGAA
GATTTACTTACCAGATTGATTTTTATTAATACAATACAGACGCAAGCGCTCGTCAACCTCCACG-TCAAATGCTGGAAAT
AGGTTTTTTCGCGGGTAATATTGGTTGGTCTCTGCGAGTCTATTGCTTTGGCACGGTAGATTTTT---------------
-----------TTAACACAGTACAA-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------ACAGGTTGGTTC--ACACTTATCCGGATTGA
TATGAAGGATTATTTCATGACAGCTGTTCCAGGTTTGCAAAATCTTGCATATTTTGGGGAGGATTAATGACG--------
-------AGAATCCATCAGCAGCATAATGTTGATTAACGACCTCAAATAAAGGGAAATTGCCTAAGACAGAAACAGTACA
---------------------ATGTTCTTCAAAAGGAAGTATATCATATC------------------------------
--------------------------------------------------------------------------------
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--------------------------------------ATAATGAACAAATCCCGTTCATGCAGGATTGCACTACCTTCT
--TTCCTAA-AATATAAAAGGCTCATCCGCTAGT-------ATAAATTCCAGAGGATACACGACTTGGAACGACGCCGCC
GATGAACCTCGCCGCCGTTGAACTTGAACCT-CGCACATAACATCAC---CATGAGATCCTCCCTGGCCCTGCTCCT---
--------------------------------------------------------------------------------
--------------------------------------CCTTCTCGGAGCAGCCATCGCCCCTATCCTCGCAACGGGTGT
CTCCCCTGCCGTCAACACAAGCGTGCTCTCGCCTGGCCCGACGGCCGGCTCCGTGAACGACACGCTGCAGCGCGG--CAT
CATCGCCACCAACCAGATCGCGCATAACGTGACGGCCACGCTGAGCATCATCTCCGACCTGGTGCGCGACCTCAACACCT
GCACCAGACTCTACATGACCATGGCCAAGACGGTGGCCGCCGCCCTAGACGACCTTCACGCCGGACGCGTCGACAACGCG
GCCGATAAGCTGAACGACACCTTCGGTGCGCCTAGTGACTGCGACATTGTGCTGTTGGGCGTGGGAGAG---GAGAAGGT
CCCTCGTGATCCCATTGAAAACGAGAATGTCGAGAACGAACGACTCATCCAATCAGCCATCGACATCTTGGACCCGCCGA
GTAGCTAGAAGGAT---G--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AATTGTATGCATGGGCGGCCAAATAAA
TTGGATGTTTCTTCCAT---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>chr1D_1
GAACTGGTGTTGCATGACCTTGTCTGTAAAGCACATGGGGTGGGTAGCTCCTTGGACCAAAGTTGTCGCATGTCGGGCGT
CGGGATGTCATCACGATCGAGTCGCGTGTATAATCGCGTGAGTCGTTATTCTTGGCTAGTCACGCCAAGTATCCCGCCTG
TCCAACAGGTGGGCGCTCCCTGAATCCGTAAATCGATTGGGATGGAGCGGCCGGCTTCAA-CTAGCTTTGTCCGCAGATA
ATATGTTTTCTGAGGTGGAAGTTGACCTTTGCCGTGACGTTGGGGTATTTCGCGAGGATTGTTATGCTCACCTGCTGTCC
TATCTCGGCCCCAAGGAGGGCAGTCGTGCTTCTTGGCCCATTCGCGCTATGACAGTATGCTGCCGTCAACCTCCACGTCA
AATGTTGGAAGTAGGTTTTTTTCGCAGGTAATATTGGTTGGTCTCTGCGAGTCTATTTCTTTGGCACGGTAGATTTGAAA
GATTTACTTACCAGATTGA-TTTTATTAACATAGTACAGATGCAAGCGCTCGTCAACCTCGACGATCAAATACTGGAAGT
AGGTTTTTTCACGGGTAATATTGGTTGGTCTCTGTAAGTCTATTGCTTTGGCACAGTAGATTTGGAAGATTTACTTACCG
GATTGATTTTCTTAACACAGTATAGACGCAAGCGCTCGTACATATGCGCATACACTCATCCCTATGAATTTCACACACGC
ACACCCTATCCCTATGGGCATCTTCGAGAGACCGAGCCGACATATCATTTTGAGATTTATGAAGTCACCGTAGCCGCCAT
TGTCATCGACGGGAACTTCTCCTACCACTAAAAGCGCATCGCCGGAAAATCTGAAATAAATTCAGGAATAATGTGAGCAT
CAGAAACCTGGTGGGCTGGGAATACCATTGTCCCTCTAACCATCCATCCACAGGTTGGTTC--GCACTTACCCGGATTGA
TATGAAGGATTATTTCATGACAGCTTTTCCAAGTTTGCAAAATCTTGCATATTTTGGGGATGATTAATGACG--------
-------AGAATCCATCAGCACCATAATGTTGATTAATGACCTCAAATAAAGGGAAATTGCCTAAGACAGAAACAGTACA
---------------------ATGTTCTTCAAAAGGAAGTATATCATATC------------------------------
--------------------------------------------------------------------------------
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--------------------------------------ATAATGAACAAATCCCGTTCATGCAGGATTGCATTACCTTCT
--TTTCTAA-AATG--AAAGGCTCATCCGCTAGT-------ATAAATCCCAGAGGATACACGGCTTTGTACGA-------
---------CGCCGCCGTTGAACTTGAACCT-CGCACATAACATCAC---CATGAGATCCTCCCTGGCCCTGCTCCT---
--------------------------------------------------------------------------------
--------------------------------------CCTGTTCGGAGCAGCCATCGCCCCTATCCTCACAACCGGTGT
CTCCCCTGCCGTCAACACGAGCGTGCTCTCGCCTGGCCCGACGCCCGGCTCCGCGAACGACACGCTGCAGCGCGGCACAT
CATCGCCACCAACCAGATCGCGCATAACGTGACGGCTACGCTGGGCATCATCTC------------CGACCTCAACACCT
GCACCAGACTCTACATGACCATGGCCAAGAAGGTGGCCGCCGCCCTGGACGACCTTCACGCCGGACGCGTCGACAACGCG
GCCCATAAGCTGACCGACACCGTGGGTGCGCCTATTGACTGCGACATGGTGCTGATGGGCATTGGAGAGATCGAGAAGGT
CCCTCGTGATCCCATTGAAAGCGAGAATGACGAGAACGATCGACTAATCCAATTAGCCATCGACATCTTGGACCCGCCGA
GTAGCTAGAAGGAT---G--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GATTGTATGCATGGGCGGCCAAATAAA
TTGGATGTTTCTTCCAT---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------
>chr1D_1
GAACTGGTGTTGCATGACCTTGTCTGTAAAGCACATGGGGTGGGTAGCTCCTTGGACCAAAGTTGTCGCATGTCGGGCGT
CGGGATGTCATCACGATCGAGTCGCGTGTATAATCGCGTGAGTCGTTATTCTTGGCTAGTCACGCCAAGTATCCCGCCTG
TCCAACAGGTGGGCGCTCCCTGAATCCGCAAATCGATTGGGATGGAGCGGCCGGCTTCAA-CTAACTTTGTCCGCAGATA
ATATGTTTTCTGAGGTGGAAGTTGACCTTTGCCGTGACGTTGGGGTATTTCGCGAGGAATGTTATGCTCACCTCCTGTCC
TATCTCGGCCCCAAGGAGGGCAGTCGTGCTTCTTGGCCCATTCGTGCTATGACAGTATGCTGCCGTCAACCTCCACGTCA
AATGTTGGAAGTAGGTTTTTTTCGCAGGTAATATTGGTTGGTCTCTGCGAGTCTATTTCTTTGGCACTGTAGATTTGAAA
GATTTACTTACCAGATTGA-TTTTATTAACATAGTACAGATGCAAGCGTTCGTCAACCTCCAT-ATCAAATGCTGGAAGT
AGGTTTTTTCACGGGTAATATTGGTTGGTCTCTGTGAGTCTATTGCTTTGGCACAGTAGATT-GGAAGATTTACTTACCA
GATTGATTTTCTTAACACAGTATAGACGCAAGCGCTCGTACATACGCGCATACACTCATC--------------------
--------------------------------------------------------------------------------
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--------------CCTATGAATTTCACACA-CGCACACGCTATCCC---TATGGGCATCTTCGAGAGACCGAGCCGACT
TATCATTTTGAGATTATTGAAGTCACCGTAGCCGCCTTCAACGGAAACTTCTCCTACCACTAAAAGCGCATCGCCGAAAA
ATTTGAAATAAATTCAGGAATAATGTGAGCATCAGAAACCTCTCCGGAGCAGCCATCGCCCCTATCCTCACAACCGGTGT
CTCCCCTGCCGTCAACACGAGCGTGCTCTCGCCTGGCCCGACGCCCGGCTCCGCGAACGACACGCTGCAGCGCGGCA--T
CATCGCCACCAACCAGATCGCGCATAACGTGACGGCTACGCTGGGCATCATCTCCGACCTGGTGCGCGACCTCAACACCT
GCACCAGACTCTACATGACCATGGCCAAGAAGGTGGCCGCCGCCCTGGACGACCTTCACGCCGGACGCGTCGACAACGCG
GCCGATGAGCTGACCGACACCGTGGGTGCGCCTATTGACTGCGACATGGTGCTGATGGGCATTGGAGAGATCGAGAAGGT
CCCTCGTGATCCCATTGAAAGCGAGAATGACGAGAACGATCGACTAATCCAATTAGCCATCGACATCTTGGACCCGCCGA
GTAGCTAGAAGGAT---G--------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------GATTGTATGCATGGGCGGCC-------
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-------------------------------
>chr1D_653
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-----------------------------------------------------------------ACTTACCCGGATTGA
CAGGAAGGACTATTTCCGGACACCTTTTCCAAGTCTGCAAAATCTTGCATATTTTGGAGAGTATTAATGACGAGATCTTG
CCAACTAAGAATCCATCATCACCATAATGTTGATTAACGACCTCAAATAAAGGGAAATCACCCAAGACAGAAAAGAGATT
ATGTAGACAGTACTACTACTTATGTTCTTCAAAAGGAAGTATATCATATTTTTTTATTTTTTTAGAAAA--GGAGGATGA
CCCCCGACCTCTGCATCTGGGAGATGCATGCGGCACTTTATTAATTATTCTCACAAGACCTTACAAAGTCATACAACAGT
AAGACTAAAGCCACCGTCTAAGCAACAACTGGCGCTACACCTATCCAATTGATGAAGGGGCGCTGATAGCCTGGGCCTAA
TACCAAACAGACATCGCAGCCACACCTAACATCTAAGACCTGAGATCCCAACCAGGACGCCTACCGGGTATGGGCACCCA
CCAGTCCG-GCGTGCTCCTCAACCAGGACGCCTGCCGGGTATGAGGCCGCCTCAACCACTTGCCACCAATCCATCTTTAG
AGCTGTACTGCTGCATCTACCTTCCACGGTCTAGCTACCGTCGACGCCACCACGACGCCAGACAGCTTCCTCCTCCTGCG
CGAGTCCATCTCCGCGCATCGGACGCAGAGTCTCCACTGCGCCATGCCGCCGAGGCCCACCCTCGATGATACTGTTGATG
CCACACCGCCCCACATACATGCCATCTCGTGTCGACTCCGAACTACCAACAACTCCACCACCCTGAGCAGTCCCCGGCCA
ACGCCTTCAGGAAGGAACACGACACCAAAGTGCGATCATCGGCCAAACAGAGGAACCGAAGCTTTTGCCTGCGCTCATGG
CAGAGGTGG-GGGCGTATGATCCACACCGAAGCCTCCAGGAAGGAATCGGCGCCGAGGGCGTCAAATTTGGTGCGGCCAC
CACGCTGGCCTGGAGTTTCCCCCGGCTCCATGCCCACCCGCCAGATCCATCCAGGCAGTATTGGCGTCGACCGTAGTCGC
TACCGTAGCCAGCACGAACCGGAGTAGATCGAGTCGGAGACGACGCCTCCCATGGAACTCCGGTCGGCCATCGAGGAGCC
CCCGTAGCGCCGCCGCCTCCACGCCACCCACGCAGCCGTGGAAGGCCCCCCATCTGCACCCGCGGATGCCGCCCGCCAGG
CAGGCCACACCGCGCGCCACCGATCGAGGCCGCCGCCACGAGATCCCCACGCCGCCCGAGGCACCGGCGGTCAAATCTGA
AACAGATCGACCACGGCCACCATAGGAGTGCCCCGAACGGCCCCCCACGCGACCACCGGGGGAAGTAGCTCTTGCCGTCG
CCCCC-TGAGTACTCGCCGGTGCGCCCCGTCGCCAACGCGCCGCCAACCGCCG-CGAACGCCACCCGCGCCATGTTCAGC
CGCTGCGGGGAGGAGAGATCCTGCCGCCGCCGCCGCCAACCGGGCTTTGCCCGGCGGCGCGCCCCGGCAGCGACGGGCAG
GAGAGGTGGGAGAGGGAGCCAAGGGCTTAGCGGCGGTAGGGTTCCCCCCTGGTCGCCGTGCAGGGGCGACGCAGGGGAGA
GGGGCATGCGTAATACTACTAGCCAAGCATATCATATTATAATGAACAAATCCCGTTCATGCAGGATTGTACTACCTTCT
--TTTCTACTAAAATAAAAGGCTCACCCGCTAGT-------ATAAATCCCAGAGGATACACGACTTGGAACGACGCTGCC
GATGATCCTCGCCGCCGTTGAACTTGAACCT-CGCACATAACATCAC---CATGAGATCCTCCCTGGCCTTGCTCCT---
--------------------------------------------------------------------------------
--------------------------------------CCTCCTCGGAGCAGCCATCGCCCCTATCCTCACAACCGGCGT
CTCCCCTGCCGTCAACACGAGCGTGCTCTCGCCTGGCTCGACGCCCGGCTCCGCGAACGACACGCTGCAGCGCGGCA--T
CATCGTCACCAACCAGATCGCGCATAACGTGACGGCTACGCTGGGCATCATCTCCGACCTGGTGCGCGACCTCAACACCT
GCACCAGACTCTACATGACCATGGCCAAGAAGGTGGCCGCCGCCCTGGACGACCTTCACGCCGGATGCGTCGACAACGCG
GCCGATAAGCTGACCGACACCGTGGGTGCGCCTATTGACTGCGACATGGTGCTGATGGGCATTGGAGAGATCGAGAAGGT
CCCTCGTGATCCCATTCAAAGCGAGAATGTCGAGAACGATCGACTCATCCAATTAGCCATCGACATCTTGGACCCGCCGA
GTAGCTAGAAGGAT---G--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GATTGTATGCATGTGCGGCCAAATAAA
TTGGATGTTTCTTC------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>chr1D_653
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-----------------------------------------------------------------ACTTACCCGGATTGA
TAGGAAGGATGATTTCCGGACACCTTTTCCAAGTCTGCAAAATCTTGCATATTTTGGAGAGTATTAATGACGAGATCTTG
CCAACTAAGAATCCATCAACACCATAATGTTGATTAACGACCTCAAATAAAGGGAAATCACCCAAGACAGAAAAGAGATT
ATGTAGACAATACTACTACTTATGTTCTTCAAAAGGAAGTATATCATATA--TTTTTTTATTTAAAAAAAAGGAGGATGA
CCCCCGACCTCTGCATCTGGGAGATGCATGCCGCACTTTATTAGTTATTCTCACAAGACCTTACAAAGTCATACAACAGT
ATGACTAAAACCACCGTCTAATCAACAACAATCGCTACACCTATCCAATTGATGAAGGGGCGCTGATAGCCTGGGCCTAA
TACCAAACAGACATCGCAGCCACACCTAACATCTAAGACCTGAGGTCCCAACCAGGACGCCTGCCTGGTATGGGCACCCA
CCAGTCCGCGCGTGCTCCTCAACCAGGATGCCTGCCGGGTATGAGGCCGCCGCAACCACTTGCCACCAATCCATCTTCAG
AGCTGTACTGCTGCATCTACCTTGCACGGTCTAGCTACCGTCGACGCCACCATGACGCCAGACAGCTTCCTCCTCCTGCG
AGAGTCCATCTCCGCGCATCGGACGCCGAGTCTCCACTGCGCCATGCCGCCGAGGCCCACCGTCGATGATACTGTTGATG
CCACACCGCCCCACCTACATGCCATCTCGTGTCGACTCCGAACTACCAGCAACTCCACCACCCTGAGCAGTCCTCGGCCA
ACGCCTTCAGGAAGGAACACGACACCAAAGTGCCATCGTCGGCCAAACAGAGGAACCGAAGCTTTTGCCTGCGCTCATGG
CAGAGGTGGGGGGCGTATGATCCACACCGAAGCCTCCAGGAAGGAATCGGCGCCGATGGCGTCGACTTTGGTGTGGCCGC
CACGCTGGCCTGGAGTTTCCCCCGGATCCATGCCCACCCGCCAGATCCATCCAGGCAGTATTGGCGTCGACCGTAGTCAC
TACCGTAGCCAGCATGAACCGGAGTAGATCGAGTCTGAGACGATGCCTCCCATGGAACTCCGGTCGGCCATCGAGGAGCC
GCCGTAGCGCCGCCGCCTCCACGCCACCCACGTAGCCGTGGAAGGCCCCCCATCTGCACCCGCGGATGCCGCCCGCCAGG
CAGGCCACACCGCGCGCCACCGATCGAGGCCGCCGCCCCGAGATCCCCGCGCCGCCCGAGGCACCGGCGGTCAAATCTGA
AACAGATCGACCACGGCCACCATAGGAGCGCCCCGAACGGCCCCCCACGCGACCACCGGGGGAAGCAGCTCTTGCCGTCG
CCCCCCTGAGTACTCGCCGGCGCGCCCCGTCGCCAACGCGCCGCCAAACGCCGCCGAACGCCACCCGCGCCAGGTCCGGC
CGCTGCAGGGAGGAGAGATCCCGCCACCGCCGACGCCAACCGGGCTTTGCCCGGCGGCGCGCCCCGGCAGCGGCGGGCAG
GAGAGGTGGGAGAGGGAGCCAAGGGCTTAGCGGCGCTAGGGTTTCCCCCTAGTCGCCGTGCAGGG-CGACCCAGGGGAGA
GGGGCAAGCGTAATACTACTAGCCAAGTATATCACATTATAATGAACAAATCCCGTTCATGCAGGATTGTACAACCTTCT
--TTTCTACTAAAATAAAAGGCTCACCCGCTAGT-------ATAAATCCCAGAGGATACACGACTTGGAACGACGCTGCC
GATGATCCTCGCCGCCGTTGAACTTGAACCT-CGCACATAACATCAC---CATGAGATCCTCCCTGGCCTTGCTCCT---
--------------------------------------------------------------------------------
--------------------------------------CCTCCTCGGAGCAGCCATCGCCCCTATCCTCACAACCGGCGT
CTCCCCTGCCGTCAACACGAGCGTGCTCTCGCCTGGCTCGACGCCCGGCTCCGCGAACGACACGCTGCAGCGCGGCA--T
CATCGTCACCAACCATATCGCGCATAACGTAACGGCTACGCTGGGCATCATCTCCGACCTGGTGCGCGACCTCAACACCT
GCACCAGACTCTACATGACCATGGCCAAGAA-------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------CGATCGACTCATCCAATTAGCCATCGACATCTTGGACCCGCCGA
GTAGCTAGAAGGAT---G--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GATTGTATGCATGTGCGGCCAAATAAA
TTGGATGTTTCTTC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr1A_676
--------------------------------------------------------------------------------
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--------ATTATTTCCGGACACCTTTTCCAAGTCTGCAAAATCTTGCATATTTTGGAGAGGATTAATGACG--------
-------GGATCCCATCAGCACCATAATGTT-ATTGACGACTTCAAATAAAGGGAAATCGCCCAAGACAGAAAAGAGATT
ATGTAGACAG---TACTTCTTATGTTCTTCAAAAGGAAGTATGTCAT---------------------------------
--------------------------------------------------------------------------------
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-----------------------------------ATTATAATGAACAAATCCCGTTCATGCAGGATTGTACTACCTTTT
--TTTCTACTAAAATAAAAGGCTCACCAGCTAGTGCCTAGTATAAATCTCAGAGGATACACAGCTTGGATCGACGCAGCC
GATGAACCTCGCCGCCGTTGAACTTGAACCT-CGCACATAACATCACCAGCATGAGATCTTCACTGGCCCTGCTCCT---
--------------------------------------------------------------------------------
--------------------------------------CCTCCTCGGAGCAGCCATCGCCCCTATCCTCACAACCGGCGT
CTCCCCTGCCGTCAACACGAGCGTGCTCTCGCCTGGCCCGACGCCCGGCTCTGCGAACGACACGCTGCAGCGCGGCA--T
CATCGCCACCAACCAGATCGCGCATAACGTGACGGCTACGCTGGGCATCATCTCCGACCTGGTGCGCGACCTCAACACCT
GCACCAGACTCTACATGACCATGGCCAAGAAGGTGGCCGCCGCCCTGGACGACCTTCACGCCGGACGCGTCGACAACGCG
GCCGATAAGCTGACCGACACCGTGGGTGCGCCTATTGACTGCGACATGGTGCTGATGGGCATTGGAGAGATCGAGAAGGT
CCCTCGTGATCCCATTCAAAGCGAGAATGTCGAGAACGATCGACTCATCCAATCAGCCATCGACATCTTGGACCCGCCGA
GTAGCTAGAAGGAT---GTCTTGTATGCATGGGCGGCCATATAAATTGGATGTTTCTTCTGTTTGCTTCTGTTTGCTTCT
GTAACACAATGGACTGATTCCTCGATGATTAGTGCTTCTCCCTTTTTTTGTACTAATGGTTTCTTTCTCTTCATGGTATG
AACGAATTCTTGGCTCAGTTATGATGATCTCAACATGAGTACGATCCTTGCGCAAGCAAGTCACCACGGCGACCTACATA
GCCTGGAATCTTTGGAAGGAGCGCAACCGACGCACCTTCGAGGGGAAGAGATGAATTGTATGCATGGGCGGCCAAATAAA
TTGGATGTTTCTTCCAT---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr1A_813
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------ATGTTCTTTAGAAGGAAGTACATCAA---------------------------------
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-----------------------------------ATCATAA--AATAAATCCCGTTTATGCAGGATTGTATTCGTGCAT
TCTTTCTAA-AAT---AGAGGCCTCTCCGCTTGT-------ATAAATCCCA-AGGATACACGGCTTGGAACGATGCAGCC
ATTGAA-----------------TTGAACCTCCGCACGTAAAT----CACCATGAGTTCCTCCCTGGCCCTGCTCGT---
--------------------------------------------------------------------------------
--------------------------------------CCTCCTCGCAGCAGCCAGCGCCCCTATCCTCGCAGTCGGCGT
CTCCCCTGCCGTCAACCCGAGAGTGCTCCCGG---------CGGCCGCCTCCTCAAACGATACGCTGCAGCGCGGCA--T
CGTCGCCACCAACCAGACCGCGAACAGCGTGACGTCCACGCTGCACATCATCTCAGACCTCGTGCGCGACCTCAACACCT
GCACCGGGTACTACACGACCATGGCCGAGACGGTGGCCGCCGCCCTCGACGACCTTCACGCCGGACGTGTCGTCAACGCG
ACCGATAAGCTTAACGACGCCCTGGGCGCGCCTAGTGACTGCGACATCTTGCTGAGCGGCGTAGGAGTGATCGGGAAGGT
CGATCGTAATCCCATTCGGAAGGAAAACGGGGAGAACGAGAAGCTTGTCAAGTTAGCCATCAACATCTTGAACCCGCCGC
GAAGCTAGAGGACATACG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GATTGTATGCATGGGCGGCCAAATAAA
TTAGATGTT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr1B_963
--------------------------------------------------------------------------------
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---------CGCAGCCGTTGAA-TTGAACCT-CGCACGTAAAT----CACCATGAGTTCGTCCCTGGCCCTGCTCCT---
--------------------------------------------------------------------------------
--------------------------------------CCTCCTCGCGGCAGCCACCGCCCCTATCCTTGCCGCCGGCGT
CTCCCCTGCCGTCAGCACAATCGTGCTCCCGG---------CGGCCACCTCCGCAAACGACACGCTGCAGCGCGGCA--T
CGTCGCCACCAACCAGATCGCGCACAACGTGACGTCCACGCTGCACATCATCTCGGACCTGGTGCGCGACCTCAACACCT
GCACCGGGTACTACACTACAATGGCCACGACGGTGGCCGCCGCCCTCGTCGACCTTCACGCCGGACGCGTCGTCAACGCC
ACGGACAAGCTGAGCGACGCCCTGGGTGCGCCCAGTGACTGCGACATTGTGCTGAGCGGCGTGGGCATGATTGGGAAGGT
CGCCCGTGATCCCATTCGGCAGGAGAACGACGAGAACGAGAAGCTTGTCCAGGCAGCCATCAACATCTTGAATCCGCCGA
GAAGCTAGAGCACATACG--------------------------------------------------------------
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-----------------------------------------------------GATTGTATGCATGGGCGGCCAAATAAA
TTAGATGTT-----------------------------------------------------------------------
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>chr5B_1588
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-------------------------------------------------------------------------------C
GTGTCCTGTGCACGCCACGTGTCCTCAC--------CCACCGCTCCATCCCAGCCTTATCTTCTCGCAAGCTCTTTTCTC
CACACGTTCTCTCCTTTTCCTCAATTGTCCTCATTAGTTACAGC--AGA--------GAAGAGGCCGTTGACCCCATGGC
GAGCACCACCAACCAGCACAGCTGGGAACGGAAACGGGCCGCCGCCGACGGCCGCATGATTCTACTCTGCCCCAACACCA
TCCCTGTTGCAAACATTGGGTGGAGCAGCCACTCTGCTGCTGCATTCGCGCCATGGCCAGTAGCCGCCATTGACGCAAGC
AGGCCAAAATCTGAACCGGCAACACAAACGGCGAGGTGACAAAAAGTTCAGGGGGAGGGCGACTCTGGCCAGCACCGCTG
TAAGGTTCCTGCTCGCCATTGCCACTCCATGCTTAAATCCATGTTTTTTTGCAGCACCACCATTGCTGCGACGTTCCATC
TCCCTCAACTCCGGCCGTCGTCACACGGCAGTGCTACGTTGCAACGCCACCGGTGCTACCAGTGGAGGAGGTTGCGGTG-
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>chr1A_1592
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---TCCTATGCGCACCACGTGTCCCCTGTGTGGCCACCACCACTCCATCCCAGCCTTATCTACTTGCCGTGTGTCTTCTG
CATCCCTTTTCTTCTTTTCCCCTTTTCATCCTCACGCGACACTACCAGAGAAGAGCTGAAGAGGCCATCCATCCCATGGC
GAGCACCACCAACAAAC----CTGGGAACCGGAAGTGGACGCCGTCGATGGCCTTATAATGCTACTCTGTTTCAACACCG
CCCCTGTTGCAAACATAGGGCAAAGCAGCCACCCTACTACCATGGCTCGCAGGAGTC--GCAACCGCTATTGATGCAAGC
AA-CGAAGGTCGACACTGGCAACGCTACGACACGGTTGCAGCAAGGTCG-GCGGGAGGGCATCTCTGGCCAGCACGGCTG
TAAGGTTCCCGCTCGCCACTGCCACTCCACGCTGCAATCCATGTG-TTTTGCAGCCGCACCATTGCCGTGACGGACCATC
TCCCTCAACTCCGGCCGTCGTCAC-CGGCGGTGCTGCGTTGCAACGTGACTGGCGCTACCAGTGAAAGAGGCTCCGGTG-
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-------------------------------
>SNPs
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-------------------S------------------------------------------------------------
-------------------------------------------------S------------------------------
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--------------------------------------------------S-----------S-----------------
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------S--------------------------------------------------------------------S----
------------S-------------------------------------------------------------------
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-------------------------------------------------------------SS-----------------
-------S------------------------------------------------------------------------
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---------------------------------------------------------------------S----------
-----------------------------S--------------------------------------------------
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-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
-------------------------S--S-S-S----------------------------------S------------
-------------------------------------------S-S----------------------------------
------------------------------S--------S-------S--S-----------------------------
---S-----------------------------------S----S------S----------------------------
------------------S---S--------S-------S----------------------------------------
--------------------SS----------------------------------------------------S-----
---------------------------------------------S-----S-------S-------------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_556
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--------------------------------------------------------ACCTCCACGTCAAATGCTGA----
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>reverse_3728
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-----------------------------------------------CACAGCTTGTAAACCGCGTC-------------
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-------------------------------
