>input_sequence_79028
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----------------------ATGGAGCATTTGGTCGAATTATACAGCGGGTGGGAAATCCAACTTCTTGTACTGCTCA
GCTTCACATTGCAGTCGTTCCTCTTCTTTGCTGGCAGACTGCGGCGCCGAAGCAGCAACAGCTTTCTCAGGCTCTGCCTC
TGGGCAGTTTATTTGGGGGCAGACTTGGTAGCAGTGTATGCACTGGGCTATCTCTCTAAGCG---CCAGGATGTCACCAT
---TGAAACGAACGTACTTACAAGAACCCAACCACTAGCTTTCTTTTGGGCACCATTCCTCCTCATCCATCTTGGTGGGC
AGGATACCATCACTGCTTTCGCCATGGAGGACAACAACTTGTGGTTGAGGCATCTGTTGAATCTGGTGATGCAAGTTTCC
CTGGCTTTATATGTTTTTTGGAAGTCCATTGGTAA---ACACAGTGCGAACCTTCTGCTTGCGGGTAGCTTTGTGTTTGT
TACTGGAATTATCAAGTATGGATAA-------------------------------------------------------
--------------------------------------------------------------------------------
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--------
>chr1D_1_TraesCS1D01G351900
GCATTACTCCCCCACCAGGCACCCCCTCCGTCCTCGCCTTCTCACCGGCCGCCGACCGTCGCGCCGTCGCTAGTCTCGCG
GCTCTCGCCGTACACAAGG-AAGGAGAGAGGACCAGATCGCCAGAGGAGCCGACCCCCGACCATCCGGCGTC--------
CGCC----AGCCTGCGAGTCTTCGA-CTTCGACAGCATCCAGCTCTCCACATCGCCAAGCAACTCAGCAGCGACCGTCGG
TCCATCTCGGCATCTCGGCGCTCGGCGGCG----TCTCCTCCACTTCGCCACAACGTCTTCC-----------------A
CGGAGCACTCAAGTCAACGTAGTAAGCCCCCATCTCCCATTCTTTGTCTCATTTT---TTTGTTTCATTCTTCGTCC---
GCTATTCTGGATGACTATATGTACATGGCAAGTTGGATCTTGGACGCACTGTTCTTTAGTACTAT--TTGTTACTGATTT
TATTGGACGCAACTGCAAGTATAGAAGAATT-TTTCGTTGTTATGCTGTCAAAAT-TTTCTTTAAAATATGCATGCTGTC
AATGTGTTCTGAAAGTGCATTTTCTGTACATGGTACATACTTCGGTTAAAACCAAAAACTGAACCAAAAAATCGGTTAAC
CGTAATTTCAGTTAGCTGAATTTTACTGTCAAATTCGGTTTCCACTTTCCCAAACTGAATTCACAAAAAAAACCCG----
---AACAGCAGAAACCGAAATTTTGGTTTCTACAGAACGCCCAGGCCTGGAGAGAAGATGGAATGGTTAGCCAGTTTGTC
AT--TTATTTCTTCCGCATTGTTTCTCTTTCCATTCCACATACGACATATATGTTTGGTCTTTGCTGTATATTTAGCCAG
CAGGAAGTGGTGTCATAAACAAAACATTGGATACTTGCTTGCTGAACATGCCTAGTTAAAGCTAAAACGGAAGTATATTA
TTTAATCAGGTGTTTTGCTATTTTC--AAAAATTCAGACTGAATCATCCAACTTATACTCATC------AGGTGGTCCGA
GGCACAAGGAATCTAGCATGCGATGGAGCATTTGGTCGAATTATACAGCGGGTGGGAAATCCAACTTCTTGTACTGCTCA
GCTTCACATTGCAGTCGTTCCTCTTCTTTGCTGGCAGACTGCGGCGCCGAAGCAGCAACAGCTTTCTCAGGCTCTGCCTC
TGGGCAGTTTATTTGGGGGCAGACTTGGTAGCAGTGTATGCACTGGGCTATCTCTCTAAGCG---CCAGGATGTCACCAT
---TGAAACGAACGTACTTACAAGAACCCAACCACTAGCTTTCTTTTGGGCACCATTCCTCCTCATCCATCTTGGTGGGC
AGGATACCATCACTGCTTTCGCCATGGAGGACAACAACTTGTGGTTGAGGCATCTGTTGAATCTGGTGATGCAAGTTTCC
CTGGCTTTATATGTTTTTTGGAAGTCCATTGGTAA---ACACAGTGCGAACCTTCTGCTTGCGGGTAGCTTTGTGTTTGT
TACTGGAATTATCAAGTATGGATAAAGAACATGGTCTCTCAAGTGTGGCAGCCTTCAAAGTCTTGAGAGCTCAGATGCAC
TGCGTTACAAAAAGGAATTGCCTGAAGGAATCTCTGGTGATGTTGGCGTTGTTCGTGCTGCTCTGGATTCCATGCCATTT
GTCCTTGATGTCATGGCCGAACGCAACTTACTTGATCTCGGCCGGGAATATATGAACAAAATAGATGACCCTGAGCAAAT
GATACGGATGGTGAGGCTTCAGCTTGGCATGATATACGACGATCTCTACACTAAGTCTCTTGTGCTCAGAACACGGAGTG
GAGTTATACTTAGATGCATCTCTCAGGCCTCGGTAATAGTTGCCTTTGTGCTCTTCCATGCAAGTAGCAGAGACAAG---
---TATAGCAAAGCTGACATTGCCATCACCTATTCGCTATTTGTGGGTTGTTTTTTCTTTGAAGTCAGTTCAACGTTTGT
TTCCATGTTGTCACCTTGGACATGGGCATGGTTGAAGGTTAGAGGGTGTGATGCACTCGCCAGTTT---GTGGGTTTTCT
TTTGCTCCGACATCGGATATCCAAGGACGATGAAACAGCAGCGGTGGCCAAATTTGATTGGACAGTACAACTTACATAGC
TGGTTGACTGACAGCGGCCCGAAGCAAAGCATA------------ATAATGGTTGTGTTCAGAAAGTTGTTTGTGGATTT
GTTGGGCGTCAAAAAGAAGAAAATATTTTGGATGAGCAAGCTATTAGACACCGCTTACGTGGATGTGGGTAGCAAGATTG
TGGAGTGTGTTGCAGAAGAGACTA--CTCTTGACATTTGATTCCGATATTGATAAACCCAATGAATGGCCAAAAATTGGT
TCCTTGTTGAAAGAGGCATCAGAACTTTTTGCTAATGATTTTGGTATGGCAATTATCTGGATGCATGCAGTTACTGAGTT
GCTTTTGAAAAAATGTGAATCTTCCCATTTGGATATAGAGGTTCATGGTACAAGTGAATTCGGTTTGATGATTTTGGTAT
GTCGGAAG
>chr1B_1
GCATTTCTCTCCCACCAGGCAGCCCCTCCGTCCTCGCCTTCCCACCGGCCGCCAACCGTCGCTA----------------
-GTCTCGCCGTACGCAAGGAAAGGAGAGAGGACCAGATCACCAGAGGAGCCGACCCCCGACCATCCGGCGTC--------
CGCCCACCAGCCTGCGAGTCTTCGA-CTTCGACAGCATCCAACTCTCCACATCTCCAAGCAACTCAGCAGCGACCGTCGG
TCCATCTCGGCATCTCGGCGCTCGGCGGCGCGCGTCTTCTCCACTTCGCCAAAACGTCTTCC-----------------A
CGGAGCACTCAAGTCAACGTAGTAAGCCCCCATCTCCCATTCTTTGTCTCATTTTTTTTTTGTTTCATTCTTCGTCC---
ATTATTCTGTATGACTATCTGTACATGGTAAGTTGGATCTTGGATGCACTGTTCTTCAGTA---T--TTGTTACTGATTT
TATTGGATGCAACTGCAAGTATAGAAGAATTTTTGCGTTGTTATGCTGTCAAAAATTTTCTTTAAAATATGCATGCTGTC
AATGTGTTCTGAAAGTGCATTTTGTGTGCACGGTACATAATTCGGTTAAAACCCAAAACTGAACCGAAAAATCGGTTAAC
CGGAATTTCAGTTAGCTGAATTTTAGTGTCAAATTCGGTTTCCACTTTTCCAAACCGAATTCACAACAACAACAACAAAA
CCAAACAGCAGAAACTGAAATTTCGGTTTCTACCGAACGCCTAGGCCTAGAGAGAAGATGGAATGGTTAGCCAGTTTGTC
ATATTTATTTCTTCCGCATTGTTTCTCTTTTCATTCCACATACCGCATATATGTTTGGTCTTTGCTGTATATTTAGCCAG
CAGGAAGTGGTGTCATAAACAAAACATTGGATACTTCCTTGTTGAACATGCCTAGTTAAAGGTAAAAAGGAAGTATATTA
TTTAATCAGGTGTTTTGCTATTTTC--AAAAATTCAGACTGAATCATCCAACTTATACTCGTC------AGGTGGTCCGA
GGCACAAGGAATCTAGCATGCGATGGAGCATTTGATTGAATTATACAGCGGGTGGGAAATCCAACTTCTTGTACTGCTCA
GCTTCACATTGCAGTCGTTCCTCTTCTTTGCTGGCAGACTGCGGCGCCGAAGCAGCAACAGCTTTCTCAGGCTCTGCCTC
TGGGCAGTTTATTTGGGGGCAGACTTGGTAGCAGTGTATGCACTGGGCTATCTCTCTAAGCG---CCGAGATGTCACCAT
---TCAAACGAACATACTTATAAGAACCCAACCACTAGCTTTCTTTTGGGCACCATTCCTCCTCATCCATCTTGGTGGGC
AGGATACCATCACTGCTTTCGCCATGGAGGACAACAACTTGTGGTTGAGGCATCTGTTGAATCTGGTGATGCAAGTTTCC
CTAGCTTTATATGTTTTTTGGAAGTCCATTGGTAA---ACACAGTGCGAACCTTCTGCTTGCGGGTAGCTTTGTGTTTGT
TACTGGAATTATCAAGTATGGAGAAAGAACATGGTCTCTCAAGTGTGGCAGCCTTCAAAGTCTTGAGAGCTCAGATGCAC
TGCGTTACAAAAAGGAATTGCCTGAAGGAATCTCTGGTGATGGTGGCGTTGTTCGTGCTGCTCTGGATTCCATGCCATTT
GTCCTTGATGTCTTGGCCGAACGCAACTTGCTTGATCTCGGCAGAGAATATATGAACAAAATAGATGACCCTGAGCAAAT
GATACGGATGGTGAGGCTTCAGCTTGGCATGATATACGACGATCTCTACACTAAGTCTCTTGTGCTCAGAACGTGGAGTG
GAGTTATACTTAGATGCATCTCTCAGGCCTCGGTAATAGTTGCCTTTGTGCTCTTCCATGCAAGTAGCAGAGACAAT---
---TATAGCAAAGCTGATATTGCCATCACCTATTCGCTATTTGTGGGTTGTTTTTTCTTTGAAGTCAGTTCAACGTTTGT
TTCCATGTTGTCACCTTGGACATGGGCATGGTTTAAGGTTAGAAGGTGTGATGCACTCGCCAGTTT---GTGGGTTTTCT
TTTGCTCTGACATCGGATATCCAAGGACGATGAAACAGCAGCGGTGGCCAAATTTGATTGGACAGTACAACTTAGATAGC
TGGTTGACTGACAGCAGCCCGCAGCAAAGCATA------------ATAATGGCTGTGTTCAGAAAGTTGTTAGTGGGTTT
GTTGGGTGTCAAAAAGAAGAAAATATTTTGGATGAGCAAGCTATTAGACACCGGTTACGTGGATGTGGGTAGCAAGATTG
TGGAGTGTGTTGCAGAAGAGATTATTCTCTTGACATTTGACTCCGATGTTGATAAACCCAATGAATGGCCAAAAATTGGT
TCCCTGTTGAAAGAGGCATCAGAACTTTTTGCTAATGATTTTGGTATGGCAATTATCTGGATGCATGCAGTTACTGAGTT
GCTTTTGAAAAAATGTGAATCTTCCCATTCGGATATAGAGGTTCATGGTACAAGTGAATTCGGTATGATGATTTTGGTAT
GTCGTAAG
>chr1A_2
-CATTTCTCCCCCACCAGGCAGCCCCTCCGTCCTCGCCTTCTCACCGGCCGCCGACCGTCGCGCCGTCGCTAGTCCCG--
--------------------------------------------------------------------------------
----------------------------------------------CCACATCGCCAAGCAACTCAGCAGCGACCGTCGG
TCCATCCCGGCATCTCGGCGCTCGGCGGCGCGCGTCTTCTCCACTTTGCCACAACGTCTTCC-----------------A
CTGAGCACTCAAGTCAACGTAGTAAGCCCCCATCTCCCATTCTTTGTCTGA--TTTTTTTTGTTTCATTCTTCGTTTGCT
ACTATTCTGTATGACTATATGTACATGGTAAGTTGGATCTTGGGTGCACTGTTCTTTAGTA---TATTTGCTACTGATTT
TATTCGATGCAACTGCAAGTATAGAAGAATT-TTGCGTTGTTATGCTGTCAAAAAATTTCTTTAAAATATGCATGCTGTC
AATGTGTTCTGAAAGTGCATTTTCTGTGCATGGTACATGATTCGGTTAAAACCAAAAACTGAACCGAAAAATCGGTTAAC
CGGAATTTCAGTTAGCTGAATTTTAGTGTCAAATTCGGTTTCCACTTTTCCGAACCGAATTCACAAAAAAAAAAAAAACG
AACAACGCCCAG------------------------------AGGCCTGGAGAGAAGATGTAATGGTTAGCCAGTTTGTC
ATATTTATTTCTTCGGCATTGTTTCTCTTTCCATTCCATACACCGCATATATGTTTAGTCTTTGCTGTATATTTAGCCAG
CAGGAAGTGGTGTCATAAACAAAACATTGGATACTTCCTTGTTGAACATGCCTAGTTAAAGCTAAAAAGGAAGTATATTA
TTTAATCAGGTGTTTTGCTATTTTC--AAAATTTCACACTGAATCATCCAACTTATACTCATC------AGGTGGTCCGA
GGCACAAGGAATCTAGCATGCGATGGAGCAT---------------AGCGGGTGGGAAATCCAACTTCTTGTACTGCTCA
GCTTCACATTGCAGTCGTTCCTCTTCTTTGCTGGCAGACTGCGGCGCCGAAGCAGCAACAGCTTTCTCAGGC----CCTC
TGGGCAGTTTATTTGGGGGCAGACCTGGTAGCAGTGTATGCACTGGGCTATCTCTCTAAGCG---CCAGGATGTCACCAT
---TGAAACAAACATACTTACAAGAACCCAACCACTAGCTTTCTTTTGGGCACCATTCCTCCTCATCCATCTTGGTGGGC
AGGATACCATCACTGCTTTCGCCATGGAGGACAACAACTTGTGGTTGAGGCATCTGTTGAATCTGGTGATGCAAGTTGCC
CTAGCTTTATATGTTTTTTGGAAGTCCATTGGTAA---ACACAGTGCAGACCTTCTGCTTGCGGGTAGCTTTGTGTTTGT
TACTGGAATTATCAAGTACGGAGAAAGAACATGGTCTCTCAAGTGTGGCAGCCTTCAAAGTCTCGAGAGCTCAGATGCAC
TGCGTTACAAAATGGAACTGCCTGAAGGAATCGCTGGTGATGTTGGCGTTGTTCGTGCTGCTCTGGATTCCATGCCATTT
GTCCTTGATGTCATGGCCGAACGCAACTTGCTTGATCTCGGCCGAGAATATATGAACAAAATAGATGACCCTGAGCAAAT
GATACGGATGGTGAGGCTTCAGCTTGGCATGATATACGACGATCTCTACACTAAGTCTCTTGTGCTCAGAACACGGAGTG
GAGTTATACTTAGATGCATCTCTCAGGCCTCGGTAATAGTTGCCTTTGTGCTCTTCCATGCAAGTAGCAGAGACAAT---
---TATAGCAAAGCTGACATTGCCATCACCTATTCGCTATTTGTGGGTTGTTTTTTCTTTGAAGTCAGTTCAACGTTTGT
TTCCATGTTGTCACCTTGGACATGGGCATGGTTGAAGGTTAGAAGGTGTGATGCACTCGCCAGTTT---GTGGGTTTTCT
TTTGCTCTGACATCGGATATCCAAGGACGATGAAGCAGCAGCGGTGGCCAAATTTGATTGGACAGTACAACTTACATAGC
TGGTTGACTGACAGCGGCCCGAAGCAAAGCATA------------ATAATGGTTGTGTTCAGAAAGTTGTTTGTGGATTT
GTTGGGTGTCAAAAAGAAGAAAATATTTTGGATGAGCAAGCTATTAGACACCGGTTACGTGGATGTGGGTAGCAAGATTG
TGGAGTGTGTTGCAGAAGAGATTAGTCTCTTGACATTTGATTCCTATATTGATAAACCCAATGAATGGCCAAAAATTGGT
TCCTTGTTGAAAGAGGCATCAGAACTTTTTGCTAATGATTTTGGTATGGCAATTATCTGGATGCATGCAGTTACTGAGTT
GCTTTTGAAAAAATGTGAATCTTCCCATTCAGATATAGAGTTTCATGGTACAAGTGAATTTGGTTTGATGATTTTGGTAT
GTCGGAAG
>chr2B_76
---------------------------------------------------------------------------TCGCT
GGTCTCGCTATACACAAGG-AAGGAGAGAGGACCAGATCACCAGAAGAGCAGGCCCCCGACCATCCGTCCGGCGCGGCGG
CGCCCACTAACCTTCGAGCTACGACTCTTCGACAACATCCAACTCTCCAAATCGGCAAGCAACTCAGCAGCGACCGTCGG
TCCGTTGCGGCATCTCAGCGCTTGGCGGTG----TCTTCTCCAGTCTCCACGGAAGAAACTGAACATTCACTGAATGTAA
CTGAGCATTAAGTTAT-----------CCCCATCTCCCATTCTCTGTCTCG---TTTTTTTGTTTCATTCTTCGTTC---
ACTATTTTGTATGACTAT--GTACATGGC-AGTTGGATCTTGGATGCACTGTTCTTTAGTA---TAGAGGGATGAGAGAT
GAGAGATTCAGTGCTAGGAAGGATGGATGCCTAACAAACTAT--------------------------------------
-ATATGTTCTGAAAGTGCATTTTCTGTACATGCTACATAATACGGTTTAAACCAAAAACCGAACCGAAATATCGGTTAAC
CGAAATTTCGGTTAGCTGAATTTTAGTGTCAAATTTGGTTTTCACTTCCGCAAACCGAATTCACAAAAAAAG--------
----ACAGCAGAAACTGAAATTTTGGTTTCTACCGAATGCCCAGGCCT--------------------------------
--------------------------------------------------------------------------------
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>chr1A_897
AAGTAT--------------------------------------------------------------------------
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---------------------------------------------------------------------------TCTTT
TTTATTTAGCAGTCTTGCTATTTGCCAAAAAATTCACACTGAATCATATTACTTGTAGTTGTATCTTTTAGGTGGTCCGA
GGCACAAGGAATCT-GCATGCCATGGACAGTTCGACCAAACTATTCCATGAGTGGGAAATCCAGATACTTGTGCTACTCA
GCTTCACACTACAATTGTTCCTCTTCTTTGCTGGCAGGCTTCGGCGCCAAAGCAGCAGTGGGTTCCTGAGACTCTCCACC
TGGGCAGCTTACTTAGGGGCAGATTTGGCAGCAGTTTATGCACTGGGCTATCTCTCAAAGCG---TCAAGATGACACCAC
---TGAAACGAACATACTTACAAGAACCCAACCGCTAGCTATCTTTTGGGCACCATTTCTTCTCATCCATCTTGGAGGGC
AGGACACCATTACTGCTTTCGCCATGGAGGACAACAACTTGTGGTTGAGGCATCTGTTGAATCTGGTGACACAAGTTGTC
ATAGCTTTATATGTTTTCTGGAAATCCATCGGAAA---ACACAATGTGAACCTTCTACTTGCGGGTAGCTTTGTGTTTGT
TGCTGGAATTATCAAGTATGGAGAAAGAACATGGTCTCTCAAGTGTGGTAGCCTTAAAAGTCTTGAGAGCACAGATGCAA
AAAGTTACAGAAAACAATTGCCCGAAGGAATCTCGGATGATGATGGGTTTGTCCGTGCTGCTCTGGATTCCATGCATCAT
ACCATTGATATCTTATCCGAGCTTAGCATGTTTGGTTCCAAAAGAGAAGAATTAGCGGAGATAGACAAAACTGACCAAGT
GATTCGGATGGTCAAGCTTCAGCTTGGAATTATGTATGATGATCTCTACACCAAGGCTCTTGTGTTCACCACTCGGAGCG
GAGTCCTACTTAGGTGCATCTCTCAGGCATCTATTATTGTTGCTTTTGCACTCTTCCTTGCAAATGACAACGAGAGG---
---TATAACAAAGCTGACACTATAATTACCTATTCACTGTTTGCCGGGTGCTTTTTCCTAGAAGTCTGTTCAATATTTGT
TTCCATGATGTCACCTTGGACATGGACATGGTTGAAGGTTCACAAGTGGGACACACTTGCCTGGTTCTCGTGGTTTGTCT
TTCGTTGGGACATCGGATACCCAAGGATGAAA------CAGCGGTGGCCAAATGCGATTGGACAGTACAACTTCCATGGT
TGGGTGACTAACAGCAACCTGCAGCCAAGAACACACAGTCAACGAATAATGATGGTATTAAGAAA---GTTTGTGGATTT
GTTTGGTGTCCAAAAGAGGAAAATATTTTGGATGAGCAAGTTATTAGACACTGAGTACATGGATGCAGATAACATGATTG
TGGAGTATATTGTAAAAGAGATTAGTCTCTTAAATTCTGAATCCGACGACGATAAACCCCAAAGATGGC-----------
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--------
>chr1D_968
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---------------------------------------------------------------------AGGTGGTCCGA
GGCACAAGGAATCT-GCATGCGATGGACAGTTCGACCAAACTATTCAATGAGTGGGAAATCCAGATACTTGTGCTACTCA
GCTTCACACTACAATTGTTCCTCTTCTTTTCTGGCAGGCTTCGGCGCCAAAGTAGCAGTGGGTTCCTGAGACTCTCCACC
TGGGCAGCTTACTTAGGGGCAGATTTGGCAGCAGTTTATGCACTGGGCTATCTCTCAAAGCG---TCAATATGACACCAC
---AGAAACGAACATACTTACAAGAACCCAACCACTAGCTATCTTTTGGGCACCATTTCTTCTCATCCATCTTGGCGGGC
AGGACACCATTACTGCTTTCGCCATGGAGGACAACAACTTGTGGTTGAGGCATCTGTTGAATCTGGTGACGCAAGTTGTC
ATAGCTTTATATGTTTTCTGGAAATCCATCGGAAA---ACACAGTGCGAACCTTCTACTTGCGGGTAGCTTTGTGTTTGT
TGCTGGAATTATCAAGTATGGAGAAAGAACATGGTCTCTCAAGTGTGGCAGCCTTAAAAGTCTTGAGAGTACAGATGCAA
AAAGTTACAGAAAAAAATTGCCCGAAGGAATCTCGGATGATGATGGGTTTGTCCGTGCTGCTCTGGATTCCATGCATCAT
ACCATTGATATCTTATCCGAGCGTAGCATGTTTGGTTCCAAAAGAGAAGAATTAGCGGAGATAGATAAAACTGACCAAGT
GATTCGGATGGTCAAGCTGCAGCTTGGAATGATGTATGATGATCTCTACACCAAGGCCCTTGTGTTCACCACTCGGACCG
GAGTTATACTTAGGTGCATCTCTCAGGCATCCATTATTGTTGCATTTGCACTCTTCCTTGCAAATGACAAAGAGAGG---
---TATAACAAAGCTGACACTATAATTACCTATTCACTGTTTGCCGGGTGCTTTTTCCTAGAAGTCTGTTCAATATTTGT
TTCCATGATGTCACCATGGACATGGACATGGTTGAAGGTTCACAAGTGGGACACACTTGCCTGGTTCTCGTGGTTTGTCT
TTCGTTGGGACATTGGATACCCAAGGATGGAA------CAGCAGTGGCCAAATGCGATTGGACAGTACAACTTCCATGGT
TGGGTGACTAACAGCAACCTGCAGCCAAGAACACACAGTCAACGAATAATGATGGTATTCAGAAA---GTTTGTGGGTTT
GTTTGGTGTCCAAAAGAGGAAAATATTTTGGATGAGCAAGTTATTAGACACTGAGTACATGGATGCAGATAACATGATTG
TGGAGTATATCGTAAAAGAGATTAGTCTCTTAAATTCTGAATCCGACGACGATAAAGCCCAAGGATGGC-----------
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>chr1B_968
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---------------------------------------------------------------------AGGTGGTCCGA
GGCACAAGGAATCT-GCATGCCATGGACAGTTCGACCAAACTATTCCATGAGTGGGAAATCCAGATACTTGTGCTACTCA
GCTTCACACTACAATTGTTCCTCTTCTTTGCTGGCAGGCTTCGGCGCCAAAGCAGCAGTGGGTTCCTGAGACTCTCCACC
TGGGCAGCTTACTTAGGGGCAGATTTGGCAGCAGTTTATGCACTGGGCTATCTCTCAAAGCG---TCAAGACGACACCAC
---TGAAACGAACATACTTACAAGAACCCAACCACTAGCTATCTTTTGGGCACCATTTCTTCTCATCCATCTTGGCGGGC
AGGACACCATCACTGCTTTCGCCATGGAGGACAACAACTTGTGGTTGAGGCATCTGTTGAATCTGGTGACGCAAGTTGTC
ATAGCTTTATATGTTTTCTGGAAATCCATCGGAAA---ACACAGTGCAAACCTTCTATTTGCGGGTAGCTTTGTGTTTGT
TGCTGGAATTATCAAGTATGGGGAAAGAACATGGTCTCTCAAGTGTGGCAGCCTTAAAAGTCTTGAGAGCACAGATGCAA
AACGTTACAGAAAACAATTGCCCGAAGGAATCTCGGATGATGATGGGTTTGTCCGTGCTGCTCTTGATTCCATGCATCAT
ACCATTGATATCTTATCCGAGTGTAGCATGTTTGGGTCCAAAAGAGAAGAATTAGCGGAGATAGACAAAACTGACCAAGT
GATTCGGATGGTCAAGCTTCAGCTTGGAATGATGTATGATGATCTCTACACCAAGGCCCTTGTGCTCACCACTCGGAGCG
GAGTTATACTTAGGTGCATCTCTCAGGCATCTATTATTGTTGCTTTTGCACTCTTCCTTGCAAATGACAAAGAGAGG---
---TATAACAAAGCTGACACTATCATTACCTATTCATTGTTTGCCGGGTGCTTTTTCCTAGAAGTCTGTTCAATATTTGT
TTCCATGATGTCACCTTGGACATGGACATGGTTGAAGATTCACAAGTGGGACACACTTGCCTGGTTCTCGTGGTTTGTCT
TTCGTTGGGACATCGGATACCCAAGGATGGAA------CAGCGGTGGCCAAATGCGATTGGACAGTACAACTTCCATGGT
TGGGTGACTAACAGCAACCTGCAGCCAAGAACACACAGTCAACGAATAATGATGGTATTCAGAAA---GTTTGTGGGTTT
GTTTGGTGTCCAAAAGAGGAAAATATTTTGGATGAGCAAGTTATTAGACACTGAGTACATGGATGCAGATAACATGATTG
TGGAGTATATTGTAAAAGAGATTAGTCTCTTAAATTCTGAATCCAGCGACGATAAAGCCCAAGGATGGC-----------
--------------------------------------------------------------------------------
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--------
>chr2B_994
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---------------GCATCCGACGGAGAGTTTGATCAAACTATTCAGTGAGTGGGAAATCCAGCTACTTGTGCTCCTCA
GCTTCACACTACAATTGTTCCTCTTCTTTACTGGTAGCCTTCGGCGCAATGGCACCAGCGGGTTCCTAAGGCTCTCCATT
TGGGCAGCTTACTTGGGGGCAGACTTAGTAGCAGTTTATGCCCTTGGCCTTCTCTCACGACA---TGAGGATATCACCAC
CACTGAATGGCACATG------------CAACTACTGGCTTTCTTTTGGGCACCATTCCTCCTCATCCATCTTGGTGGGC
AGGACACCATTACTGCTTTTGCCATGGAGGACAACAACTTGTGGTTGAGGCATTTGTTGAATCTGGTGGTGCAAGTTCTC
TTAGCTCTATATGTTTTCTGGAAGTCCATTGGAAG---GCACAACGTGGAGCTTCTAGTCTCGGGTATCTTTGTGTTTGT
TGCTGGAGTTGTCAAGTATGGAGAAAGAACATGGTCTCTCAGGTGTGGAAGCCT--------------------------
--------------------------------------------------------------------------------
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>chr2D_1009
--------------------------------------------------------------------------------
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------------------------------TTTGATCAAAGTATTCAATGAGTGGGAGATCCAGCTACTTGTGCTCCTCA
GCTTCACACTACAATTGTTCCTCTTGTTTGCTGGAAACCTTCGGCGCCGCAGGTCCAATGGGTTCCTACGGGTCCTCATT
TGGTTAGCTTTCTTGGGGGCAGACTTGGTAGCAGTTTATGCCCTTGGCCTTCTCTCACGACG---AGAGAACAACATCAC
CACCAT------CATTGACAAGGGAAGCCAACCACTAGCTTTCTTTTGGGCACCATTTCTCCTCATCCACCTTGGTGGAC
AGGACACAGTTACCGCCTTCTCCATGGAGGACAACAACTTGTGGCTGAGGCATTTGCTGAATCTGGTGGTGCAAGTTGTC
CTAGCATTCTATGTTTTCTGGAGATCCATCAGAAGCTTAGACAGCTTGGGGTTTCTCACTTCAGGTGTCCTTGTGTTTGT
TGCTGGAATTATCAAGTATGGAGAGAGAACATGGTGTCTTAAGCGTGGGAGTCTTAAAGGCCTTGAGAGCTCA-------
--------------------------------------------------------------------------------
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>chr5D_1030
--------------------------------------------------------------------------------
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---------------------------------------------------GTGGGAAATCCAACAACTTGTGCTCCTCA
GCTTCGCACTGCAGTTGTACCTCTTCTTTACTGGAAGCCTTCGGCGGCATAGCTCCAACAGGTTCCTAAGGTACTCCATT
TGGATAGCTTACTTGGGGGCAGACTTGGTAGCAGTTTATGCCCTCGGCCTACTATCACGGCATGATCGAGATATCACCTT
---TGAATGTCACATACCAAGGAGAACCCATACAGTGGCTTCTTTTTGGGCACCATTTCTCCTCATTCATCTTGGTGGGC
AGGACACCATTACCGCTTTCGCAATGGAGGACAACAACTTGTGGTTGAGGCATTTGTTGAATCTGGTGGTGCAAGTTGTC
CTAGCTTTGTATGTTTACTGGAAGTCTATTCCAAGACTACACAGCGTGAAACTTGTAGTTTCAGGTATCCTTGTGTTTGT
TGCTGGAATCATCAAGTATGGAGAGAGGACATGGTCTCTCAAGTGTGGAAACCTTAAAAGCCTTGTGAGCTCGACCGGGC
ATCGTTTCAACAAACGGGTGCCTGTAGACACCGACGGCTATCCTGGCATTGTTTCAGCTGCTCTAGGTATGATGCCACAA
GTCCTTAAAATATTTGCAGCACGCGTTGTATACTCTAGGCCTAGAGACCAATTACTACCT---GAAGAACCCATCAAAAT
GGTCAGGGAGATGAGGATCGAGCTTGGTCTGATGTATGATGATCTCTACACTAAGGCCGTTATGCTCAGAACAAGGAGTG
GCATCATAGTTAGATGCATCTCTCAGATATCTATTGTTGCCGCTTTTGCGCTCTTCCATGCACAAGAAGATAAATTGAGT
ACCTATAGCGAAGCTGACATTGCAATCACCTATTCACTACTTATCGGTGGCCTTTTCCTGGAGCTTTGTTCAATGTTTGT
TTTCATGATGCCACCATGGACATGGGCATGGTTGAAGGT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------
>SNPs
-----S---------------S---------------------------------------------------------S
-S-------------------------------------S----------------------------------------
-----------------------------------------S--------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
S--------S----------------------------------S----------------SSS----------------
-------S--------------------------S-------------------S-------------------------
---------------------------------------S-------------------------S--------------
--S----------------------S-----------------------------S-----------------SSS----
---------------S-----------------S----------------------------------------------
-------------------------------------------SS-----------------------------------
------------------------------------S----S-------------------------S------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------S------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S----------------------------------------------S--------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
--------
>forward_202
--------------------------------------------------------------------------------
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----------------------TCGACTTCGACAGCATCCAG--------------------------------------
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>reverse_1075
--------------------------------------------------------------------------------
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----------------------------------GTCGAATTATACAGCGGGTGG-------------------------
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--------
>forward_736
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------AAAC
CCGAACAGCAGAAACC----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>reverse_2088
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CGACATCGGATATCCAAGGACG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
