>input_sequence_79023
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----------ATGAGGAGCGGCGGCGACGTCAGGTCCTTCTTCCGGCAGCAGAAGGCCCACTCCGGCGCGGCGG---CCA
CCAAGCCCACCGGCGGCGTGTCCAAGA---AGGCGGCGCACCACCAC---CAGAAGCAAGCGGCGACG------------
---CGCCCGACGCCAGGTACTCCGCCGTACGCCCAATCCCAA------------CTCCGCCGATTCGTACGCCCTGCGCG
GA-TTGACTGCTCGATCGATCGATCTGGTGTTTA-TTTGTTTTTTTTTCAATCTGTTGTTGCTTCTGCGGCAGATCACGG
CGGCGGCGCCGACGCG---GGGAGGGAGG---AGGCGGAGGACGCGGAGAGGAAGGCCAGGGAGTTCGACATGGACATGC
GCTACGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAGCGCGCCGCCGCGCTGGGCCTCGCCCCGCCGCCGCAC
GCGCTCTGCTCCGACGACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAG--------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>chr1A_1_TraesCS1A01G340500
GAGAATAAGGTGGTCATAGGGACGTTTGGGGAGCATTGTGCCTCCACACCTCTCCAACGGAGATGTACCTCCCCCAAAGG
ATGAAACTTCGGCAACACACTCTCGTCTCCATCGAGTTCACGTGCAGTTATTTAGGTCCTTTACTTTGTGCTTGTTATTA
CC-TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGAGCTTGTCATATATGTTGGTCACCTA
GTTGCATATCTAGACAATCCTATTATTTTGTTGAGCCTAAAGTTTGTTAAAAGAGTTAAAGTTTTGTTAGTCAGCTATCC
C--CCCCCCC----------------------------TTCAGACTTTTTAATTGATGTTTTGACGGGAACTCCGAGTGA
TTTATGGCCCGTGTAGGCGTTTAGGAATATTCTAGCCGCATCATAGGAA-AAAATTTGAAAGAGGGAGTTGTGGTGAATT
CGGTTATCATGATATGAACACGCTCCCTTTAATTATTATTTTTGAATTTTCGCTTCCTTACATTTGAACTTGCCTATTAC
AGTGTTTATTGTCATTCGTTCATGCTTT---GCTTCGACATTGCTATGCAGAATTGATGCTTATGTATC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------TTAATGTGACTTATGTTTGTAAGATCGGGTAGATTGT
TTGGTAACCACATAGCACCGTGTTTTTTATG---ATACTCTTGTTGTGTTGATTTTTTTTTACTCAA--TAGCAAAAGAA
AAAAATAAAG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------AAAAAATATACACATCCTGGACCCAACGTGCACCGGTCA---TGTGTG----GCA
ACGGACGATGAGATGGGTCTCATCGGTCAATGCCAGCAAACAGAGCAGCGGCAGAAGTCTCGAGAGACGAGAGGACAGCG
CCCATTTCAAAATTCAAAATTCGAACCACC-ACCACGCCCACCACAACACCCCCACCTTATAAACCC--CAACCTCCAAT
CCTCCGTCCACCATCCGCC---GCCCCCTTCCTTCCTCCAATACAACAG--AGAGATCGCGCCGCCGGGGG----GAGA-
-GAGAGAGCCATGAGGAGCGGCGGCGACGTCAGGTCCTTCTTCCGGCAGCAGAAGGCCCACTCCGGCGCGGCGG---CCA
CCAAGCCCACCGGCGGCGTGTCCAAGA---AGGCGGCGCACCACCAC---CAGAAGCAAGCGGCGACG------------
---CGCCCGACGCCAGGTACTCCGCCGTACGCCCAATCCCAA------------CTCCGCCGATTCGTACGCCCTGCGCG
GA-TTGACTGCTCGATCGATCGATCTGGTGTTTA-TTTGTTTTTTTTTCAATCTGTTGTTGCTTCTGCGGCAGATCACGG
CGGCGGCGCCGACGCG---GGGAGGGAGG---AGGCGGAGGACGCGGAGAGGAAGGCCAGGGAGTTCGACATGGACATGC
GCTACGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAGCGCGCCGCCGCGCTGGGCCTCGCCCCGCCGCCGCAC
GCGCTCTGCTCCGACGACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAGACTAGAGCATCGCC-CCAGGGCCCCG------
-----TCGAGTCACCGATCCCCGCCGCTGTCTCCACCTGCCATTCCTCGTGGTTCTGCCTACTGCTTCTTCTGTAGCCTT
GTGGCTTCTTCAGTCTTCCTGTTGTCTTCAGTCGAGTTTCCTCTGTAC-----------TTTGGGTCGATCCTGCTGGGT
GCGTGC----GATGCCTTGTGATCCGACGCGATGATGTATTAATCTCAGTATAATCTTTGCTGCATCTTTTTTTGAGCAT
AAGTACAGACACAAGCGCTCATATACACGCGCATACACTCACCCTTATAAACGCACACACACACCCTACCCCTATGAGCA
CCTCCGAGAGACTGAGCCGGCATATCATCTTGAGATTTACGAAGTCACCGTAGGCGTCTCGTCGTCGACGGGAACGTCTC
CTTCCACTGAAAGCGTATCGCCGGAAATCCTGAAATAAATTCGAAAGAAGTCCACATCACCCCCTGTGGTTTCAGAAACC
GGCTAACCCA-CCCCCAACTCTG--AAACCAGTTAACTAATCCCCT------------ACCAACCAAGGCACCCCCTAAT
CCCAATTAAAGTGGTATCTGCCGATGGTTTTGCTTGCGTGGCTGTACAGGATGGCCACGTCGGCTTGGTAGGGTGGGTCC
GAGACTTAACTGCTCCTCCGATTTGTTTGGGCATCGTCTCCCTTATTTCCTTTCGACGAGACGGCGGCGGGGCAAGACGG
GATGATCGCCGCTTGAAGGTAGCAGCGCGACGACTCCAGAAGTCCAGGTTAGGCGCTCATCTCTTTCATGCCCAGCACAC
ACGTACTTCTCTGTGTTAACTACAGAT-----------TGAAACTTGCACACCTGCAAGGCTGCAACGACCCTTTCTGAA
TTTAGATGTCAGACGCCAA---CTATATAGTCCTCGATCAGTCCGGTGATTAGTACTAACGCACCAT-------------
------------------------------------------------------------AGTTTCACCCGAGTAGTGTT
TGCTGAGTTAATGT-GAGAAGTACGTGTGTGCTGGGCATGAAAGAGATGAGCGCCTAA
>chr1D_1
GAGAATAAGGTGGTCATAGGGACGTTTGGGGAGCATTGTGCCTCCATACCTCTCCAACGGAGATGTACCTCCCCAAAAGG
ATGGAACTTAGGCAACACACTCTTGTCTCCATCGAGTTCACGTGCGGTTATTTAGGTCATTTACTTTGTGCTTGTAATTA
CC-TT------------------------CTTGTTGTTGTAGTTGTTGTTGTTGAGCTTGT------------TCACCTA
GTTATATATCTAGACAACATTATTATTTTGTTGAGCCTAAAGTTTGTCAAAAGAGTTAAAATTTTGTTAGTGACCTATTC
AACCCCCGCCCCTAGTCGACTATACAGATCCTTCAGAGTTCAGACTTTTTAATTGATGTTT-GACGGGAACTCCCAATGG
TTTAGGTTT-GTGTAAGCGTTTAGGAATATTTTAGCAGCATCATAGGAA-AAAAATGAAAGGGA-GAGTTGTGGTGAATT
CGGTTATCATGATATGAACATGCTCCCTTTAATTATTATTTTTGAATTTTTGCTTCCTTAAATTTGAACTTGCCTATCAT
GGTGTTTATTGTCCT---TTCGTGCTTT---GCTTCGACATTGCTATGCAGAGTTGATGCTTATGTATC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TTAATGTGACTCATGTTTGTAAGAT-GGGTAGATTGT
CCGATAACCACATAACACCGTGTTTTTTTATGACATACTCTTGTTGCGTTGATTATTTTATTACTCCCGTAGCAAAAGAT
AATTAGAGGTTGTTTGGATTGAAGCCCCCGTCCGCCCAGCCAATATTTTGGCATTGACCAAGAATGCGCAACTCGTTTGG
ATGAGCTCCAATCTTTTGGCTCGCCAGCGCACCCCACCTTTCCCTCTTCTGTTTCTGCGCCAACGCATTGGCAAAACTGG
GGCGGCCGAATCGGCCGCCAACATTTTGGCGTGCCCACAATGCCCACGATTTGGCGTGGCGCTCCTGGGCATAAACCAAA
CAGACCCTTATTGTTTATGACAAAAGAAAATACAG----TTCTGGACCCAACGTGCACCGGTCA---TGTGTGTGGGGCA
ACGGGCGAT-AGATGAGTCTCATCGGTCAATGCCAGCAAA-----------CAGAAGTCTCGAGAGACGAGAGGACAGCG
CCCATTTCAAAATTCAAAATTCGAACCACC-ACCACGCCCACCACAACGCCCGCACCTTATAAACCCCGCAATCCCCAAT
CCTCCGTCCACCATCCGCC---GCCCCCTTCCTTCCGCCAATACAACAG--AGAGATCGCACCACCGGGGAGAGAGAGA-
-GAGAGAGACATGAGGAGCGGCGGCGACGTCAAGTCCTTCTTCCGGCAGCAGAAGGCCCACTCCGGCGCGGCGG---CCA
CCAAGCCCACCGGCGGCGTCTCCAAGA---AGGCGGCGCACCACCAC---CAGAAGCAAGCGGCGGCG------------
---CGCCCGACGCCAGGTACGCCGCCGTACGCCCAATCCCAA------------CTCCGCCGATTCGTACGCCCGGCGCG
GA-TCGACTGG--------TCGATCTGGTGTTTTTTTTA-----TTTTCAACCTGTTGTTGCTTCTGCGGCAGATCACGG
CGGCGGCGCCGACGCG---GGGAGGGAGG---ACGCGGAGGACGCGGAGAGGAAGGCCAGGGAGTTCGACATGGACATGC
GCTACGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAGCGCGCCGCCGCGCTGGGCCTCGCCCCGCCGCCGCAC
GCGCTCTGCTCCGACGACCAGCCGTGCATCTGGGAGGGCCGCGTCTAGACTAGAGCATCACCCCCAGGGCCCCG------
-----TCGAATCACCGATCC------------------GCCACTCCTCGTGGTTCTGTCTACTGCTTCTTCTGTATCATT
GTGGCCTCTTCAGTCTTCGTGTTGTCTTCAGTC----TTCGTCTGTACGTT----------TG--------------GGT
GCGTGC----TATGCCTTGTGATCCGATGAGATGCTGTATTAATCCCAGTTTAACCTTCGGTGCATCT------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>chr1B_3
--GAATAAGGTGATCCTAGGGACGTTCGGGGAGCATTGTGCCTCCACACCTCTCCGATGGAGATGTACCTCCCCCAAAGC
AGGAAACTTC-GCAACACACCCCCGTCTCCATCGAGTTCACTTGCGGTTATTTCGGTCCTTTACTTTGTGCTTGTTATTG
TTGTT------------------------GTTGTTGTTGTTGTTGTTGTTGTTGT------CATATAGGTTGTTCACCTA
GTTGCATATCTAGTCAGCCTTATTGTTTTGTTGAGGCTAATTTTTTTCAAAAGAGTTAAAATTTTGTTAGTCGCCTATTC
A--CCCCCCCTCTAGTTGATTATACCGGTCCT------TTCAGACTTTTTAATTGATGTTTTGACGGGAACTCCCAGTGA
TTTATGATTCGCATAAGCGTTTAGGAATATTTTAGCCGCGTCATAGGGGGAAAAATGAATGCGA-GAGTTGTGGTGAATT
CGGTTATCATGATATGAGCACGCTCCCTTTAATTATTATTTTAGAGTTTTTGCTTCCTTTAATTTGAACTTGCCTACCAT
GGTGTTTATTGTCCT---TTGTTCGTGCTTAGCTTCGACATTGCTATGCAGAATTGATGCATATGTATCTTAATTAAGGG
TGTGTCTAGAACTCAGTCAACTGGGACTTAACGAAGACTCAGTCGAGTGATGTCAGCATGTGTTTTTTGCTACAAGCGGC
ACAGCTATATGCTACAAACGGCGACAAAAGATGTTGCGATGATATTGCAAGCAACCACAACAAATACTACTACTGTTCTA
ACTAAAATGCTACAACCGCAATGAAGGATGTTGCAACCGGTGAGATGACGTGCTACAACCGGTGAGGGATGGCATGCTTC
AACCAACAAGACGGATGTTACAACCGATAGGAAAAAAATGTTGCAACTAGTCACAAAAATGCTGCATGGTCGACTAAGAC
TTGGTTAAATCTCAGTCGACTGATTTTTAGCAGGGCCGCTTAATTAATGTGACTTATGTTTGTAAGATCAGGTAGATTGT
CTGGTAATCTCATAACACCGTGTTTTTTTTATG------------GCGTTGATTTTTCTATTACTCCCGTAGCAAAAGAC
AATTA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TTGTTTATGACATAAAAAAAAGATGCACATTCTGGACCCAACGTGCACCGGTCTTTGTGTGTG----GCA
ACGGGCAAT-AGATGGGTCTCATCGGTCAATGCCAGCAAACAGAGCAGCGGCAGAAGCCTCGAGAGACGAGAGGACAGCG
CCCAATTCAAAATTCAAAATTCGAACCACCCACCACGCCCACCACAACACCCGCACCTTATAAACCC--CAATCCCCAAT
CCTCCGTCCACCATCCGCCTGC-CCCCCTTCCTTCCTCCAATACAACAG--AGAGATCGCACCACCGGGGAGAGAGAGC-
---GAGAGCCATGAGGAGCGGCGGCGACGTCAAGTCCTTCTTCCGGCAGCAGAAGGCCCACTCCGGCGCGGCGG---CCA
CCAAGCCCACCGGCGGCGTCTCCAAGA---AGGCGGCGCACCACCAC---GAGAAGCAAGCGGCGGCG------------
---CGCCCGACGCCAGGTACCCCGCCGCACGCCCAATCCCAA------------CCCCGCCGATTCGTACGCCCGGCGCG
GATTTGACCGCTCGATCGATCGATCTGGTGTTTT-TTTT-----TTT-CAATCTGTTGTTGCATCTGCTGCAGACCACGG
CGGCGGCGCCGACGCG---GGGAGGGAGG---AGCTGGAGGACGCGGAGAGGAAGGCCAGGGAGTTCGACATGGACACGC
GCTACGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAGCGCGCCGCCGCGCTGGGCCTCGCCCCGCCGCCGTAC
GCGCTCTGCTCCGACGACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAGACTAGAGCATCACC-ACAGGGCCCCG------
-----TCGAGTCACCGATCCCCGCCGCCGTCTCCACCCGCCACTACTCGTGGTTCTGCGTACTGCTTCTTCTGTAGCCTT
GTGCCCTCTTCAGTCTCCGTGTTGTCTTCAGTC----TTCCTCTGTAC--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr2A_917
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---------------------------------------------------------------------------CCAAT
TCTCCATCCACCATCTGATTCTGCCCCCTTTCTTCCTCCCACCGATCCTGAAGAGCTCGCACCGCCGGCG----------
-GAGAGAGCCATGAGGAGCGGCGGCGACGTCAAATCCTTCTTCCGGCAGCAGAAGGCCCACTCCGGCGCGGCGGCCGCCA
CCAAGCCCGCCGGCGGCGTCTCCAAGA---AGGCGGCGCACCACCAC---CAGAAGCAAGCGGCGGCGGCGGCGCATCTC
CTCCGCCCGATACGAGGTATGCCGCCGCATGCCCAATCCCACGCAGTCGCCGTCCGATCCC---------------AGCG
GA-TTGACTGATCGATCTATCGATCTGTTTTTTT-TTTC-----TTTAATTCTT-TGGCTGCAGCTGCGGCAGATCACCG
CGACGGCGCTGACGCGGCGAGGAGGGAGG---AGGAGGAGGACGCGGAGAGGACGGCCCGGTAGTTCGACATGGACACGC
GCTACGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAACGCGCCGCCGCGCTCGGCCTCGCCCCGCCGCCGCAC
GCGCCCTGCTCCGACCACCAGCCGTGCCTCTGGGAAGGCCGCGTCTAGA-------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>chr2D_952
TCCCC---------------------------------------------------------------------------
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---------------------------------------AATCCAACAAA-AGAGTTCGCACCGCCGGCG----------
-GAGAGAGCCATGAGGAGCGGCGGCGACGTCAAATCCTTCTTCCGGCAGCAGAAGGCCCACTCCGGCGCGGCGGCGGCCA
CCAAACCCGCCGGCGGCGTCTCCAAGAAGCAGGCGGCGCACCACCAC---CAGAAGCAGGCGTCGGCG---GCGCATCTC
CTCCACCCGGCACGAGGTATGCCGCCGCATGCCCAAATCCCA------------CGATCCC---------------CGCG
GATTGACT-----GATCGATCGATCTGGTATTCT-CTTT-----TTA------T-TTGCTGCAGCTGCGGTGGATCACCG
CGGCGGCGCTGACGGG---ACGAGCGAGGAGAAGGAGGAGGACGCGGAGAGGAAGGCCCGGGAGTTCGACACGGACGTGC
GCTACGGGCCCTGCCTCGGCCTCACCCGCGCC------------------GCCGCGCTCGGGCTCGCCTCGCCGCCGCAC
GCGCTCTGCTCCGACCACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAGAGCGTCGCATCGCC-CTGCGGCCAAAGGCCCA
CTGAATCGAATCGTCGATCCGCG---------CCACCTGCCGCTCCTCGTGGTTCTACCGACTGCTT-------------
-------------TCTTCGTGTTGTCTTCAGTC----TTCCTCTGTACGTCTTTCTGGGTCTGGATCGATGCTGCTGCTT
GCGTGTGATGGATGCCTTGTGATCCGGTGCCATGCTGTATTATTTTCAGCTTAATCTTTGCTGCATCT------------
--------------------------------------------------------------------------------
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>chr5D_958
--------------------------------------------------------------------------------
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---------------------------------------AATACAACAG--AGAGATCGCGCCGCCGGCGAGA--GAGA-
-GAGAGAGCCATGAGGAGCGGCGGCGACGTCAAGTCCTTCTTCCGGCAGCAGAAGGCCCACTCCAGCGCAGCGGCCGCCA
---AGCCCACCAGCGGCGTCTCCAAGA---AGCCGGCGCACCACCACCACCAGAAGCAAGCGGCGGCG------------
---CGCCCGACGCCAGGTACGCCGCCGTACGCCCAATCCGAG------------CTCCGCCGATTCATACGCCCAACGCG
GATTTGACCGCTCGATCGATCGATCTGGTGTTTA-TTTA-----TTTTCAATCTACTGTTGCTTTTGCGGCAGATCACGG
TGACGGCGCCGACGCG---AGGAGGGAGG---AGGCGGAGAACGCGGAGAGGAAGGCCAGGGAGTTCGACATGGACATGC
GCTACGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAGCGCGCCGCCGCGCTGGGCCTCGCCCCGCCGCCGCAC
GCGCTCTGCTCCGACGACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAGACTAGGGCATCG-CCCCAGGGCCCCG------
-----TCGTATCACCGATCC------------------GCCACTCCTCGTGGTTCTGCCTACTGCTTCTTCTGTAGCCA-
---------TCAGTCTTCGTGTTGTCTTCAGTC----TTCGTCTGTACGTT----------TGTGTCGATCCTGCTGGGT
GCGTGC----GATGCCGTGTGATCCGATGCGATGCTGTATTAATCTCAGTATAATCTTTGCTGCATCT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>chr5D_958
--------------------------------------------------------------------------------
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---------------------------------------AATACAACAG--AGAGATCGCGCCGCCGGCGAGA--GAGA-
-GAGAGAGCCATGAGGAGCGGCGGCAACGTCAAGTCCTTCTTCTGGCAGCAGAAGGCCCACTCCGGCGCAGCGGCCGCCA
---AGCCCACCAGCGGCGTCTCCAAGA---AGCCGGCGCACCACCACCACCAGAAGCAAGCGGCGGCG------------
---CGCCCGACGCCAGGTACGCCGCCGTACGCCCAATCCGAG------------CTCCGCCGATTCATACGCCCAACGCG
GATTTGACCGATCGATCGATCGATCTGGTGTTTA-TTTA-----TTTTCAATCTGCTGTTGCTTTTGCGGCAGATCACGG
CGACGGCGCCGACGCG---AGGAGGGAGG---AGGCGGAGAACGCGGAGAGGAAGGCCAGGGAGTTCGACATGGACATGC
GCTACGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAGCGCGCCGCCGCGCTGGGCCTCGCCCCGCCGCCGCAC
GCGCTCTGCTCCGACGACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAGACTAGGGCATCG-CCCCAGGGCCCCG------
-----TCGTATCACCGATCC------------------GCCACTCCTCGTGGTTCTGCCTACTGCTTCTTCTGTAGCCA-
---------TCAGTCTTCGTGTTGTCTTCAGTC----TTCGTCTGTACGTT----------TGTGTCGATCCTGCTGGGT
GCGTGC----GATGCCGTGTGATCCGATGCGATGCTGTATTAATCTCAGTATAATCTTTGCTGCATCT------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>chr5D_958
--------------------------------------------------------------------------------
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---------------------------------------AATACAACAG--AGAGATCGCGCCGCCGGCGAGA--GAGAT
AGAGAGAGCCATGAGGAGCGGCGGCGACGTCAAGTCCTTCTTCCGGCAGCGGAAGGCCCACTCCGGCGCAGCGGCCGCCA
---AGCCCACCAGCGGCGTCTCCAAGA---AGCCGGCGCACCACCACCACCAGAAGCAAGCGGCGGCG------------
---CGCCCGACGCCAGGTACGCCGCCGTACGCCCAATTCGAG------------CTCCGCCGATTCATACGCCCAACGCG
GATTTGACCGCTCGATCGATCGATCTGGTGTTTA-TTTA-----TTTTCAATCTGCTGTTGCTTTTGCGGCAGATCACGG
CGACGGCGCCGACGCG---AGGAGGGAGG---AGGCGGAGAACGCGGAGAGGAAGGCCAGGGAGTTCGACATGGACATGC
GCTACGGGCCCTGCCTCGGCGTCACCCCCGCCCAGCGCTGGCAGCGCGCCGCCGCGCTGGGCCTCGCCCCGCCGCCGCAC
GCGCTCTGCTCCGACGACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAGACTAGGGCATCG-CCCCAGGGCCCCG------
-----TCGTATCACCGATCC------------------GCCACTCCTCGTGGTTCTGCCTACTGCTTCTTTTGTAGCCA-
---------TCAGTCTTCGTGTTGTCTTCAGTC----TTCGTCTGTACGTT----------TGTGTCGATCTTGCTGGGT
GCGTGC----GATGCCGTGTGATCCGATGCGATGCTGTATTAATCTCAGTATAATCTTTGCTGCATCT------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>chr5D_958
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---------------------------------------AATACAACAG--AGAGATCGCGCCGCCGGCGAGA--GAGAG
AGAGAGAGCCATGAGGAGCGGCGGCGACGTCAAGTCCTTCTTCCGGCAGCAGAAGGCCCACTCCGGCGCAGCGGCCGCCA
---AGCCCACCAGCGGCGTCTCCAAGA---AGCAAGCGCACCACCACCACCAGAAGCAAGCGGCGGCG------------
---CGCCCGACGCCAGGTACGCCGCCGTACGCCCAATCCGAG------------CTCCGCCGATTCATACGCCCAACGCG
GATTTGACCGCTCGATCGATCGATCTGGTGTTTA-TTTA-----TTTTCAATCTGCTGTTGCTTTTGTGGCAGATCACGG
CGATGGCGCCGACGCG---AGGAGGGAGG---AGGCGGAGAACGTGGAGAGGAAGGCCAGGGAGTTCGACATGGACATGC
GCTATGGGCCCTGCCTCGGCCTCACCCGCGCCCAGCGCTGGCAGCGCGCCGACGCGCTGGGCCTCGCCCCGCCGCCGCAC
GCGCTCTGCTCCGACGACCAGCCGTGCCTCTGGGAGGGCCGCGTCTAGACTAGGGCATCG-CCCCAGGGCCCCG------
-----TCGTATCACCGATCC------------------GCCACTCCTCGTGGTTCTGCCTACTGCTTCTTCTGTAGCCA-
---------TCAGTCTTCGTGTTGTCTTCAGTC----TTCGTCTGTACGTT----------TGTGTTGATCCTGCTGGGT
GCGTGC----GATGCCGTGTGATCCGATGCGATGCTGTATTAATCTCAGTATAATCTTTGCTGCATCT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>chr1A_1907
TCCTGAATTTATT-------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------GAAAGAAGTCCACATCACCCCCTGTGGTTTCAGAAACC
GGCTAACCCACCCCCCAACTCTG--AAACCAGTTAACTAATCCCCTGAGATATCTAATACCAGCCAAGGCACCCCCTAAT
CCCAATTAAAGTGGTATCTGCCGATGGTTTTGCTTGCGTGGCTGTACAGGATGGCCACGTCGGCTTGGTAGGGTGGGTCT
GAGACTTAACTGCTCTTCCGGTTTGTTTGGGCATCGTCTCCCTTATTTCCTTTGGACGAGACGGCGGCGGGGCAAGGCGG
GATGATCGCCGCTTGAAGGTAGCAGCGCGACGACTCCAGGAGTCCAGGTTAGGCGCTCATCTCTTTCATGCCCAGCACAC
ACGTACTTCTCACATTAACTCAGCAAACACTACTCGGGTGAAACTATGGTGCG---------------------------
-------------------------------------------------TTAGTACTAATCACCGGACTGATCGAGGACT
ATATAGTTGGCGTCTGACATCTAAATTCAGAAAGGGTCGTTGCAGCCTTGCAGGTGTGCAAGTTTCAATCTG--------
----TAGTTAACACAGAGAAGTACGTGTGTGCTGGGCATGAAAGAGATGAGCGCCTAA
>chr3A_1922
--------------------------------------------------------------------------------
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------------------------------------------GAAAGAAGTCCACATCACCCCCTGTGGTTTCAGAAACC
GGCTAACCCACCCCCCAACTCTG--AAACCAGTTAACTAATCCCCTGAGATATCTAATACCAGCCAAGGCACCCCCTAAT
CCCAATTAAAGTGGTATCTGCCGATGGTTTTGCTTGCGTGGCTGTACAGGATGGCCACGTCGGCTTGGTAGGGTGGGTCT
GAGACTTAACTGCTCCTCCGGTTTGTTTGGGCATCGTCTCCCTTATTTCCTTTCGACGAGACGGCGGCGGGGCAAGACGG
GATGATCGCCGCTTGAAGGTAGCAGCGCGACGACTCCAGGAGTCCAGGTTAGGCGCTCATCTCTTTCATGCCCAGCACAC
ACGTATTTCTCTGTGTTGACTACACAT-----------TGAAACTTGCACACATGCAAGGCTGCAACGACCCTTTCTGAA
TTTAGATGTCAGACGCCAA---CTATATAGTCCTCGATCAGTCCGGTGATTAGTACTAACGCACCAT-------------
------------------------------------------------------------AGTTTCACCCGAGTAGTGTT
TGCTGAGTTAATGT--------------------------------------------
>chr5A_1922
--------------------------------------------------------------------------------
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------------------------------------------GAAAGAAGTCCACATCACCCCCTGTGGTTTCAGAAACT
GGCTAACCCA-CCCCCAACTCTG--AAACCAGTTAACTAATCCCCTGAGATATCTAATACCGGTCAAGGCACCCCCTAAT
CCCAATTAAAGTGGTATCTGCCGATGGTTTTGCTTGCGTGGCTGTATAGGATGGCCATGTCGGCTTGGTAGGGTGGGTCT
GAGACTTAACTGCTCCTCCAGTTTGTTTGGGCATCGTCTCCCTTATTTCCTTTCGACGAGACGGCGGCGGGGCAAGACGG
GATGATCACCGCTTGAAGGTAGCAGCGCGACGACTCCAGGAGTCCAGGTTAGGCGCTCATCTCTTTCATGCCCAGCACAC
ACGTACTTCTCTGTGTTGACTACGCAT-----------TGAAACTTGCACACCTGCAAGGCTGCAACGACCCTTTCTGAA
TTTAGATGTCAGACGCCAA---CTATATAGTCCTCGATCAGTCTGGTGATTAGTACTAACGCACCAT-------------
------------------------------------------------------------AGTTTCACCCGAGTAGTGTT
TGCTGAGTTAATGT--------------------------------------------
>chr5A_1922
--------------------------------------------------------------------------------
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------------------------------------------GAAAGAAGTCCACATCACCCCATGTGGTTTCAGAAACC
GGCTAATCCA-CCCCCAACTCTG--AAACCAGTTAACTAATCCCCTGAGATATCTAATACCAGCCAAGGCACCCCCTAAT
CCCAATTAAAGTGGTATCTGCCGATGGTTTTGCTTGCGTGGCTGTACAGGATGGCCACGTTGGCTTGGTAGGGTGGATCT
GAGACTTAACTGCTCCTCCGGTTTGTTTGGGCATCGTCTCCCTTATTTCCTTTCGACGAGACGGCGGCGGGGCAAGATGG
GATGATCGCCGCTTGAAGGTAGCGGCGCGACGACTCCAGGAGTCCAGGTTAGGCGCTCATCTCTTTCATGCCCAGCACAC
ACGTACTTCTTTGTGTTAACTACGCAT-----------TGAAACTTGCACACCTGCAAGGCTGCAATGACCCTTTCTGAA
TTTAGATGTCAGACGCCAA---CTATATAGTCCTCGATCAGTCCGGTGATTAGTACTAATGCACCAT-------------
------------------------------------------------------------AGTTTCACCCGAGTAGTGTT
TGCTGAGTTAATGT--------------------------------------------
>chr5B_1922
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------------------------------------------GAAAGAAGTCCACATCACCCCCTGGGATTTCAGAAACC
GGGTAATCTA-CCCCCTCAGTTTCTAAACCGGTTAACTAATCCCCTGAGATTTCTAATACCAGCCAAAGTACCCCCTAAT
CCCGATTAGAGTGGTATCCGCTGGTGGT-TTGCTTGCGTGGCTCGAAAGGATGGCCACGTCGGCTTGGT-GGGTGGGTCT
CCTACTTAACTGCCCCTCCTGTTTGTTTGGACGTCGTCTCCCTTATTTCCTTTCGACGAGACGGCGGCGGGGCAACACAT
GATGATCGCCGCTTGACAGGAGCGGCGCGACGACTCCAGG--------TTAGGCGCTCAGCTCTTCCATGCCCAGCGCAC
GCGTCCTTCTCTTTGTGGACTACGCAT-----------TGAAACTTGCACACCTGCAA--------CGACCCTTCCTGAA
TTCAGATGTCACACGCCCACACCTAGATAGTCAGAGATCTGTTCGGTGATTAGTACTAACGCACCAC-------------
------------------------------------------------------------AGTTGCACGGGAGTAGTGCT
TGTTTAGTTAATGT-G------------------------------------------
>SNPs
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
-----SSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------S----S-------
-----------------S-S---------------------------S------------S------------S----S-
S-------------------------------------------------------------------------S-----
------SSS------S---------------S----------------------S-SS--S-SSS---------------
--------------------------------------------------S---------S----------------S-S
S------------S-SSS---S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------S-------------S-S---------------S------------S-SSSSSS------------S
--SS-S-SSS----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S--S-----S---------------------------------------
----S----S----------------------------------------------------------------------
----------------------------------------------------S-------------------S-S-----
----------------------------------------------------------------------S---------
--------------------------------S-----------------------------------------------
-------------------S---------------------------------------------S--------------
--------------------S-----------------------------------------------------S-----
--------------------------------------SSSSSS------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S--------------S-------------------------------------
-----S------------S--------------SSSS-----------------------S-------------------
---------------------------S------S---------------------------------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------
--------------------------------------------------------------S-----------------
-------------------------------------------------------------------------------S
--------------------S-----------------------------------------------------------
---------------------------------------S----------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>forward_126
--------------------------------------------------------------------------------
--------------------------CTCCATCGAGTTCACGTGCA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>reverse_2654
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CGTATCGCCGGAAATCCTGA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
