>input_sequence_79009
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------ATGGACAAGTACACGATTCGCATCCTTGCACTAGCCCTGCTGTCTCTGTATCTCGTATGCTCTGCTAC
TGTTGCTCAATGTAAGCACACCAATCCGGTTTA--------AATTTTTCTCTTCT--CCTGGAAGTGTATATATGTAGTA
CTACTGCTAGTGAAGGAGGGC-------TTTTTT------TTTTGTC----------TAAGCTGTTGGACGTTTATTCAT
TCTACTCCAAAATATATAATTG----CATAACAATCAATTGTTCCTTTGTTATTCCATAGGCCAAATCATGGCTGACACG
GACGGCGAGAAGATCAGTTTGTCAAACGGGCTATGCACCAAGGTGAATCGGTTTCGATGCAGCCGTGCAGGAGAGTGCTT
CTGTTGTTTGACAGGGTATGACTGCTACTTTACAATGGATGAGTGCAAGAAAGAGTGTAACAAATCCTCGGCTTCAGAAG
ACATACTAGTGGAGATGACATCCCCT---CCT---TTACCTGCTCCTTAA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr1B_1_TraesCS1B01G382400
AGCTCAGACATGGAGTGTGGAAGAAAGACAATGACGAGATGTATGTATCTACTAGATCATGACCATGAGATATCATCCCA
TAGAAATGACCTTTGACTCTCATGTGACATGAATTTTCTCTTTGTATATATATTTGTTAATCCGTGGCAACGCACGGACA
CTTAGCTAGTACACCTTAGATAAAGGAATGAAGGGAGTATGACGCAAACATAGTAGCGCAGAGGACTGTGTCAGGAGGCG
TGGAAAGGCCTGTCAAATGAGTACATCTATACGACTAAGACATGTGTTGCTACGTAAAATGGACACGTGTCATCCATCAG
GGCGAGTCTCACCTGCTAATCGTGAGACCTGGTCTCATATAATTTTTTCCGGGCGCACCCCAACCACTAGTATATTATCA
TGCTCCTCTGATTCCGTGTTATGAAAATCTGTCGTTCAAAATATAGACCTAATTAATGCTATATTGTCAATTGTGCTACA
CCATACAAGGCAGGCAATAAATATTGGAGAATTACAATTTGGAAAAACTATAAACATGCGAAGTAGGAGATAATTTCGAC
AAACAATAATTTCCTAATTACCTGCATTAATTTGCTACCAAAATTTGGGAACTTGTATAAAAAAGGAGGAAAATACCCTT
GCTTGATATATGCGCGTGGGCGTGGGGCTGTCCTTTAATGAGGGTTCATAGTATGGAAATATACTTGTACTAATTATCTG
CATTAATTTGCTACAAAATTTTGGAAACTTGTCTA--AAGAAGGAGGAAAATAACCTTGCCTGAAATATGCGCGTGGGGC
TGTCCTTTACTGAGGGTTCATAGTATGGAAAGATACTACTAAATTTTGGTTTTATTGCTCGATGTTTACTGCCCGGATGG
GAATGAGT------------------------------------------------TATATATATACGGGTGATGTCTTG
TATGCGTCATGTCATATGTTGATTGCTAGCGAATATATTTCTCATCGACAAACAAAGAGGTTGACAACCTAGTGTTGTAC
CGGGTGGAC--TATGGACAAGTACACGATTCGCATCCTTGCACTAGCCCTGCTGTCTCTGTATCTCGTATGCTCTGCTAC
TGTTGCTCAATGTAAGCACACCAATCCGGTTTA--------AATTTTTCTCTTCT--CCTGGAAGTGTATATATGTAGTA
CTACTGCTAGTGAAGGAGGGC-------TTTTTT------TTTTGTC----------TAAGCTGTTGGACGTTTATTCAT
TCTACTCCAAAATATATAATTG----CATAACAATCAATTGTTCCTTTGTTATTCCATAGGCCAAATCATGGCTGACACG
GACGGCGAGAAGATCAGTTTGTCAAACGGGCTATGCACCAAGGTGAATCGGTTTCGATGCAGCCGTGCAGGAGAGTGCTT
CTGTTGTTTGACAGGGTATGACTGCTACTTTACAATGGATGAGTGCAAGAAAGAGTGTAACAAATCCTCGGCTTCAGAAG
ACATACTAGTGGAGATGACATCCCCT---CCT---TTACCTGCTCCTTAATTTTGCAGCCTAGTTAAGCTTACGTACATG
CATCTTTACTTGTCCCAAGAAAGAAATAATGTCTGATATATATTTGGTT---------TGCAATAGGATGGAGTAATACT
CTAGCAATTGTTGATGAGTATTTGGA---------------------------------TTGTAATTTGACAAGAAAAAT
GCCAAAAGTATGAATTTGTACCAAGTGTAGTTTGCCCCACACCAACAGTAGTCTCTAGGTCCGCCCCTGTCTTAAGGATG
ACATCGTGGTAAGGGCGGTGTCGTTGTTCGCATCGTGCATCTCGCCGGCTACGATCTGGTGAATGCACGTTGAGATGGAT
TTTTTTTTTTTAGATAGACAGAGAGAGAGAGAATCTTAACGCCAAGTGCAATCATATATAGTTAGTCTGTTGAGTAAATA
GGCAATTTCTCGATTAAATTAATCCATGAGTAAATCACTAGCATGGCATTGACTAAGTTGATGACGTACTGACTCTGATC
TAAACATGCACGTACTAAGCAAACAGTAGACAAATCTACACATACTGCTAGTACTGCTAATATGAAAATAAACAAGAGCG
GGATAAACGAGTTATACCCTCCAGTAGGCCACGCAGAGGCCGCGGCTTTGGTGGCAGCAGCGGCGTCCTCGGCGACCTTC
TTGTCGGCTTCAGCTTTCTCGGCGGCGGCACGGTCGGCGTCGGTGGACATGGTGATGACGAAGGCGACGCGGATGTAGAG
GAAGTAGACGATCGGAAGCGAGCAGTCGCGTAATCGCTGCCCAAAAACCTATTCGCCCCTCACCCCGTACAGGAACCAAG
AAGGGCGTGGTTTCGGAGACCTGCTCTCCCGTCGACCGTGTACGTGGCGGACGGGATGGAGTCACCGGCGGCAGCAGCAG
CAAAGGAACGACGGTGGGCGTGCGCGTGAGCAGATGTGATCTGTTCGTGGCGGCTAGGGTTAGGAGACACCGCATACTTA
TAGACGCAGCCGCATGGAGAGACGTGGGCTCGACCCACGTCTGAGTCCGTGA
>chr1A_492
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------AGGCAATAAATATTGGAGAATTACAATTCGGAAATAAAAACAT-------AGTAGGAG-----------
-----ATAACTCCATAATTACCTGCTTCCATTCGTAT-------------------------------------------
--------------------------------------------------------------------------------
--TTATTTTGCCACCAAATTTGT-AAACTTTTCTAAGAAAAAGGAGAAAAATAACCTT---TGATTTATGTGCATCGAAC
TGTCCTTTAATGAGGGTTCATACTATGGAAAGGTAATAAATAATTTCGATTATATTGCTCGATGCTTACTGCCAGGGAGG
GATCTC---------------------TCTTCTCTCCACCTCTCTCTCTCTCTCTCTCTACATATACGGGTCATGTTATG
TGT----------------TGTTTGCCAGCAAATATATTTCTCATCGACAACCAAAGAGATCGACAGAGGGGTGTGTG--
--------C--TATGGACAAGTACACGATTCGCATCCTTGCACTAGCTCTACTGTCTCTACATCTCGTATGCTCTGCTAC
TGTTGCTCAATGTAAGCACACCAATCGGGTTTA--------ATTTTTCCACTCATCGAA-------GTATGTATGTAGTA
CTATAGCCAGTGAAGGTGGCC-------TTTCTTCTTC--TTCTTTTTTGGTCCAAATAATCTGTTGCGCGTTTATTTAT
TCCGCTCTAAAATATATAAT------------------TTGTTCGTTTGTCATTCCATAGGTCGAACCATGGCTGACACG
GATAGCGAGAAGATCAATTTACCAAACAGGCTATGCCATAAGGTAGCTCCGTGTCGATGCGTCA------AAGAGTGCTT
CTGTTGTTTGCTAGATGAGTGGTGCTACGCGACAATGGATGAGTGCGCGATAAAGTGTAAATGATCCTCTTCTTCAGAAG
ACATACTGGTGGCGATGATATCCCCT---CCT---TTACCTGTTCCTTAATTTCGCAGCCTAGTCAAATTGGATTACATG
CATATTTACATGTCCCGAGAAACAAATGATGCCTGATATATATTTGGTT---------TGCAATAAGATCTAGTAATACT
---------GTCGCTGAGTATTTGGTTTGGCAAAAGAATGAAATTCCAATAGAATCTCTTTGTAATTTGACAAAAAAAGT
GCCAAAAGTATGAATTCGTACCAAGTATAGTTTGCCCCACT--AATAATAGTGTCTAGGCCCACCCTTGTCTCTAGGACG
ACATTGTCATAGGGGCGGCGCCGTCATTCTCATACTTCATCTCGCC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr1D_723
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--TTATTTTGCCACCAAATTTTGAAAACTTGTCTA--AAAAAGGAGGAAAATAACCTT---TGATTTATGCGCATTGAGC
TGTCCTTTAATGAGGGTTCATATTATGGAAAGATAATAAATAATTTTGATTATATTGCTCGATGCATACTGCCCA----G
GATCTC---------------------TCTTCTCTCCACCTCTCTCTCC------CTCTACATATACGGGTCATGTCATG
TGT----------------TCTTTCCTAGCAAATATATTTCTCATCGACAACCAAAGAGATTGACAGCCGGT--TGTG--
--------C--TATGGACAAGTACACGATTCGCATCCTTGCACTAGCTCTACTGTCTCTACATCTCGTATGCTCTGCTAC
TGTTGCTCAATGTAAGCACACCAATCGGGTTCA--------ATTTTTTCACTCATCGAA-------GTATGTATGTAGTA
CTATAGCCAGTGAAGGTGGCC-------TTTTTT------TTCTTTTTTTGTCGAAATAATCTGTTGCGCGTTTATTTAT
TCCGCTCTAAAATATATAATTG----CATAA----TAATTGTTCGTTTGTCATTCCATAGGTCGAACCATGGCTGACACG
GATAGCGAGAAGATCAATTTACCAAACGGGCTATGCCATAAGTTACCTTCGTATCGATGCGTCA------AAGAGTGCTT
CTGTTGTTTGGTAGATGAGTGGTGCTACTCCACAATGGATGAGTGCGCGATAAAGTGTAAATGATCCTCTTCTTCAGAAG
ACATACTGGTGCCGATGACATCCCCT---CCT---TTACCTGCTCCTTAATTTCGCAGCCTAGTCAAATTGGGTTACATG
CGTATTTACATGTCCCGAGAAACAAATGATGCCTGATATATATTTGATT---------TGCAATAAGATCTAGTAATACT
CTAGCAATTGTCGCTGAGTATTTGGTTTGGCAAAAGAATGAAATTCCAATAGAATCTCTTTGTAATTTGACAAGAAAAGT
GCCAAAAGTATGAATTTGTACCAAGTGTAGTTTGCCCCACT--AACAATAGTGTTTAGGCCAACCCTTATCTCTTGGACG
ACATTGTCGTAGGGGCGGCGCCGTCATTCGCTTAGTTCATCTCGC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr7D_723
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--TTATTTTGCCACAAAATTTCGGAAACTTTTCTA--AAAAGGGAGAAAAATAATCTTCCTTGATTTATGCGCTAGGGGC
TGTCCTTGAATGAGGCTTCATAGTCTAAAAACATACTAAATAATTTCAATTTTATA----GATGTTTACTGCAGT----G
GATCGTGGTAAGTCATAACACTAGACATCTTCTCTCATCCTCTCTCT----------ATATATGTACGAGGGATGTCTTG
TGT----------------TGATTGCTACCAA--ATATTTGCCATCAACAACCCAAGTGATCGACATCCTAGTGTTGTAT
CGCG--TGGGGTATAGACAAGTACACGATTGGCATCCTTGCACCAGCCCTACTGTCCCTACATCTCGTATGCTATGCTAC
TATTGCTCAATGTAAG--------TCGTGTTATGCAACCTTAATCTTTTTC-------A-------GTATATAGTTAGTA
CTATAACTAGTGAAGGAGGCC-------TTTTTCTTTTGGTTTTGTT----------CAATCTGTTGTGCATTTATTTAT
TCTACTCTCAAATATATAATCG----AATAACAATTAATTGTTCATTTGTTATTCCATAGGCCAAATCATGGCTGACACG
GATAGCGGCAAGATCAGTTTACCATATGGGCTATGTGCTTATGAGCCTAAGTCTCAATGCACCAATCCTGAAGCGTGCGT
CCGTTGTACTATAGATGGAGTATGCTACGTAACTATGGATGAGTGCAAGATAGAGTGTAAAGAAACGTCATCTTCAGAAG
ACATATTACTGGCGATGACATCCCCT---CCT---T--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr3D_979
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------CTAGTGCTCTAT
CGGGATTGGGGTATGGACAAGTACACGATTCGCATCCTTGCAGCAGCCCTACTGTCTCTACATCTCGTATGCTTTGCTAC
GGTTGCTCAGTGTAAGCACAACAATCAGGTTTA--------AATTTTCA-CTTCT--CCTGAA---------AGTATGTA
GTATAACTAGTGAAGGCC---TTTTTCTTTTGTT------TCTTGTC----------TAATCTCTTGCGTGATTATCTAT
TCTACTCTAAGATGG----TTG----CAGAA----CAATTTTTGGTTTCATATTCTACAGGCCGAATCATTGCTGACACA
GGTAGCGAGAAGATCAAAGCA------GAGCTATGCGTACATGTAACTCATGATCAATGCACCCCTGGTGGAGAATGCTT
CTGTTGTTTGGTAAATGTTTTCTGCTACACAACGATGGATGAGTGCGAAGAAGATTGCAAAAAATCATCGTCTAGAGAAA
ACATACTACTGGCAATGTCATCCCCTTCTCCT---TTACCCACTCCCTAATTTTTCAGCCTAGTCAAATTGGTTTACAT-
----TTTACTTGTCCCAAGAAATAACTA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr1B_1000
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TATGGACACGTACACGATTCGCATCCTTGCACTAGCCCTATTGTCTCTATATCTCGTATGCTCTGCTAC
CGTTGCTCAATGTAAGCACACCAATCAGGTTATGCACACTTAATTTTTCCAGTTCCCCCTGGA---------AGTATGTA
GTATAGCTACTAAAACCTATTTTTTTCATTTGTT------TCTTGTC----------TAATCTTTTGTGCGTTTATTTAT
TCTTCACTAATTTTC----TTTTTCACATAA----CGATTGTTCGTTTGTTATCCCCTAGGCCGAATCATAGATGACACA
GATAGCGAGAAGATCGATTTACCAAATGGGCTATGCGTTAAGAGTAAATGCCGTAGT------ACTCCAGAAGATTGCTT
CTGTTGTTTGGCAGATAACAACTGCTACTGGACTATGGCCGAATGCAAGGCAGCGTGTAAAAAATCCTCGTCTTCACAAG
ACATGCTACTGGCGACGACAACCCCT---CCTCCTTTACCTGCTCCTTAGTTTTCCAGCCTAGTCAAATTGGCTTACAT-
---ATTTACTTGTCCCAAGAGAGAAATAATGCCTGATATATGTGTGGAAATACAATTGTGCAATAAGATCAAGTAATACT
CTAGCAATTGTTG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr5B_1850
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CTGTTGAGTAAATA
GGCAATTTCTCGATTAAATTAATCCATGAGTAAATCACTAGCATGGCATTGACTAAGTTGATGACGTACTGACTCTGATC
TAAACATGCACGTACTAAGCAAACAGTAGACAAATCTACACATACTGCTAGTACTGCTAATATGAAAATAATCAGGAGCG
GGATAAACGAGTTATACCCTCCAGTAGGCCACGCAGAGGCCGCGGCTTTGGTGGCAGCAGCGGCGTCCTCGGCGACCTTC
TTGTCGGCTTCAGCTTTCTCGGCGGCGGCACGGTCGGCGTCGGTGGACATGGTGATGACGAAGGCGACGCGGACGTAGAG
GAAGTAGACGATCGGAAGCGAGCAGTCGCGTAATCGCTGCCCAAAAACCTATTCGCCCCTCACCCCGTACAGGAACC-AG
AAGGGCGTGGTTTCGGAGACCTGCTCTCCCGTCGACCGTGTACGTGGCGGACGGGATGGAGTCATCGGCGGCAGCAGCAG
CAAAGGAACGACGGTGGGCGTGCGCGTGAGCAGATGTGATCTGTTCGTGGCGGCTAGGGTTAGGAGACACCGCATACTTA
TAGGCGCAGCCGCGTGGAGAGACGTGGGCTCGACCCACGTCCGAGTCCGTGA
>chr1B_1851
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGTTGAGTAAATA
GGCAATTTCTCGATTAAATTAATCCATGAGTAAATCACTAGCATGGCATTGACTAAGTTGATGACGTACTGACTCTGATC
TAAACATGCACGTACTAAGCAAACAGTAGACAAATCTACACATACTGCTAGTACTGCTAATATGAAAATAAACAGGAGCG
GGATAAACGAGTTATACCCTCCAGTAGGCCACGCAGAGGCCGCGGCTTTGGTGGCAGCAGCGGCGTCCTCGGCGACCTTC
TTGTCGGCTTCAGCTTTCTCGGCGGCGGCACGGTCGGCGTCGGTGGACATGGTGATGACGAAGGCGACGCGGATGTAGAG
GAAGTAGACGATCGGAAGCGAGCAGTCGCGTAATCGCTGCCCAAAAACCTATTCGCCCCTCACCCCGTACAGGAACCAAG
AAGGGCGTGGTTTCGGAGACCTGCTCTCCCGTCGACCGTGTACGTGGCGGACGGGATGGAGTCACCGGCAGCAGCAGCAG
CAAAGGAACGACGGTGGGCGTGCGCATGAGCAGATGTGATCTGTTCGTGGCGGCTAGGGTTAGGAGACACCGCATACTTA
TAGACGCAGCCGCGTGGAGAGACGTGGGCTCGACCCACGTCCGAGTCCGTGA
>chr4A_1851
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGTTGAGTAAATA
GGCAATTTCTCGATTAAATTAATCCATGAGTAAATCACTAGCATGGCATTGACTAAGTTGATGACGTACTGACTCTGATC
TAAACATGCACGTACTAAGCAAACAGTAGACAAATCTACACATACTGCTAGTACTGCTAATATGAAAATAAACAGGAGCG
GGATAAACGAGTTATACCCTCCAGTAGGCCACGCAGAGGCCGCGGCTTTGGTGGCAGCAGCGGCGTCCTCGGCGACCTTC
TTGTCGGCTTCAGCTTTCTCGGCGGCGGCACGGTCGGCGTCGGTGGACATGGTGATGACGAAGGCGACGCGGACGTAGAG
GAAGTAGACGATCGGAAGCGAGCAGTCGCGTAATCGCTGCCCAAAAACCTATTCGCCCCTCACCCCGTACAGGAACC-AG
AAGGGCGTGGTTTCGGAGACCTGCTCTCCCGTCGACCGTGTACGTGGCGGACGGGATGGAGTCACCGGCGGCAGCAGCAG
CAAAGGAACGATGGTGGGCGTGCGCGTGAGCAGATGTGATCTGTTCGTGGCGGCTAGGGTTAGGAGACACCGCATACTTA
TAGACGCAGCCGCGTGGAGAGACGTGGGCTCGACCCACGTCCGAGTCCGTGA
>chr4A_1851
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGTTGAGTAAATA
GGCAATTTCTCGATTAAATTAATCCATGAGTAAATCACTAGCATGGCATTGACTAAGTTGATGACGTACTGACTCTGATC
TAAACATGCACGTACTAAGCAAACAGTAGACAAATCTACACATACTGCTAGTACTGCTAATATGAAAATAAACAGGAGCG
GGATAAACGAGTTATACCCTCCAGTAGGCCACGCAGAGGCCGCGGCTTTGGTGGCAGCAGCGGCGTCCTCGGCGACCTTC
TTGTCGGCTTCAGCTTTCTCGGCGGCGGCACGGTCGACGTCGGTGGACATGGTGATGACGAAGGCGACGCGGACGTAGAG
GAAGTAGACGATCGGAAGCGAGCAGTCGCGTAATCGCTGCCCAAAAACCTATTCGCCCCTCACCCCGTACAGGAACC-AG
AAGGGCGTGGTTTCGGAGACCTGCTCTCCCGTCGACCGTGTACGTGGCGGACGGGATGGAGTCACCGGTGGCAGCAGCAG
CAAAGGAACGATGGTGGGCGTGCGCGTGAGCAGATGTGATCTGTTCGTGGCGGCTAGGGTTAGGAGACACCGCATACTTA
TAGACGCAGCCGCATGGAGAGACGTGGGCTCGACCCACGTCCGAGTCCGTGA
>chr6B_1851
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGTTGAGTAAATA
GGCAATTTCTCGATTAAATTAATCCATGAGTAAATCACTAGCATGGCATTGACTAAGTTGATGACGTACTGACTCTGATC
TAAACATGCACGTACTAAGCAAACAGTAGACAAATCTACACATACTGCTAGTACTGCTAATATGAAAATAATCAGGAGCG
GGATAAACGAGTTATACCCTCCAGTAGGCCACGCAGAGGCCGCGGCTTTGGTGGCAGCAGCGGCGTCCTCGGCGACCTTC
TTGTCGGCTTCAGCTTTCTCGGCGGCGGCACGGTCGGCGTCGGTGGACATGGTGATGACGAAGGCGACGCGGACGTAGAG
GAAGTAGACGATCGGAAGCGAGCAGTCGCGTAATCGCTGCCCAAAAACCTATTCGCCCCTCACCCCGTACAGGAACC-AG
AAGGGCGTGGTTTCGGAGACCTGCTCTCCCGTCGACCGTGTACGTGGCGGACGGGATGGAGTCACCGGCGGCAGCAGCAG
CAAAGGAACGACGGTGGGCGTGCGCGTGAGCAGATGTGATCTGTTCGTGGCGGCTAGGGTTAGGAGACACCGCATACTTA
TAGGCGCAGCCGCGTGGAGAGACGTGGGCTCGACCCACGTCCGAGTCCGTGA
>chr5A_1851
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGTTGAGTAAATA
GGCAATTTCTCGATTAAATTAATCCATGAGTAAATCACTAGCATGGCATTGACTAAGTTGATGACGTACTGACTCTGATC
TAAACATGCACGTACTAAGCAAACAGTAGACAAATCTACACATACTGCTAGTACTGCTAATATGAAAATAAACAGGAGCG
GGATAAACGAGTTATACCCTCCAGTAGGCCACGCAGAGGCCGCGGCTTTGGTGGCAGCAGCGGCGTCCTCGGCGACCTTC
TTGTCGGCTTCAGCTTTCTCGGCGGCGGCACGGTCGGCGTCGGTGGACATGGTGATGACGAAGGCGACGCGGACGTAGAG
GAAGTAGACGATCGGAAGCGAGCAGTCGCGTAATCGCTGCCCAAAAACCTATTCGCCCCTCACCCCGTACAGGAACC-AG
AAGGGCGTGGTTTCGGAGACCTGCTCTCCCGTCGACCGTGTACGTGGCGGACGGGATGGAGTCACCGGCGGCAGCAGCAG
CAAAGGGACGACGGTGGGCGTGCGCGTGAGCAGATGTGATCTGTTCGTGGCGGCTAGGGTTAGGAGACACCGCATACTTA
TAGGCGCAGCCGCGTGGAGAGACGTGGGCTCGACCCACGTCCGAGTCCGTGA
>chr5A_1851
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGTTGAGTAAATA
GGCAATTTCTCGATTAAATTAATCCATGAGTAAATCACTAGCATGGCATTGACTAAGTTGATGACGTACTGACTCTGATC
TAAACATGCACGTACTAAGCAAACAGTAGACAAATCTACACATACTGCTAGTACTGCTAATATGAAAATAATCAGGAGCG
GGATAAACGAGTTATACCCTCCAGTAGGCCACGCAGAGGCCGCGGCTTTGGTGGCAGCAGCGGCGTCCTCGGCGACCTTC
TTGTCGGCTTCAGCTTTCTCGGCGGCGGCACGGTCGGCGTCGGTGGACATGGTGATGACGAAGGCGACGCGGACGTAGAG
GAAGTAGACGATCGGAAGCGAGCAGTCGCGTAATCGCTGCCCAAAAACCTATTCGCCCCTCACCCCGTACAGGAACC-AG
AAGGGCGTGGTTTCGGAGACCTGCTCTCCCGTCGACCGTGTACGTGGCGGACGGGATGGAGTCACCGGCGGCAGCAGCAG
CAAAGGAACGACGGTGGGCGTGCGCGTGAGCAGATGTGATCTGTTCGTGGCGGCTAGGGTTAGGAGACACCGCATACTTA
TAGGCGCAGCCGCGTGGAGAGACGTGGGCTCGACCCACGTCCGAGTCCGTGA
>chr3B_1851
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGTTGAGTAAATA
GGCAATTTCTCGATTAAATTAATCCATGAGTAAATCACTAGCATGGCATTGACTAAGTTGATGACGTACTGACTCTGATC
TAAACATGCACGTACTAAGCAAACAGTAGACAAATCTACACATACTGCTAGTACTGCTAATATGAAAATAATCAGGAGCG
GGATAAACGAGTTATACCCTCCAGTAGGCCACGCAGAGGCCGCGGCTTTGGTGGCAGCAGCGGCGTCCTCGGCGACCTTC
TTGTCGGCTTCAGCTTTCTCGGCGGCGGCACGGTCGGCGTCGGTGGACATGGTGATGACGAAGGCGACGCGGACGTAGAG
GAAGTAGACGATCGGAAGCGAGCAGTCGCGTAATCGCTGCCCAAAAACCTATTCGCCCCTCACCCCGTACAGGAACC-AG
AAGGGCGTGGTTTCGGAGACCTGCTCTCCCGTCGACCGTGTACGTGGCGGACGGGATGGAGTCACCGGCGGCAGCAGCAG
CAAAGGAACGACGGTGGGCGTGCGCGTGAGCAGATGTGATCTGTTCGTGGCGGCTAGGGTTAGGAGACACCGCATACTTA
TAGGCGCAGCCGCGTGGAGAGACGTGGGCTCGACCCACGTCCGAGTCCGTGA
>chr2A_1851
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGTTGAGTAAATA
GGCAATTTCTCGATTAAATTAATCCATGAGTAAATCACTAGCATGGCATTGACTAAGTTGATGACGTACTGACTCTGATC
TAAACATGCACGTACTAAGCAAACAGTAGACAAATCTACACATACTGCTAGTACTGCTAATATGAAAATAAACAGGAGCG
GGATAAACGAGTTATACCCTCCAGTAGGCCACGCAGAGGCCGCGGCTTTGGTGGCAGCAGCGGCGTCCTCGGCGACCTTC
TTGTCGGCTTCAGCTTTCTCGGCGGCGGCACGGTCGGCGTCGGTGGACATGGTGATGACGAAGGCGACGCGGACGTAGAG
GAAGTAGACGATCGGAAGCGAGCAGTCGCGTAATCGCTGCCCAAAAACCTATTCGCCCCTCACCCCGTACAGGAACC-AG
AAGGGCGTGGTTTCGGAGACCTGCTCTCCCGTCGACCGTGTACGTGGCGGACGGGATGGAGTCACCGGCGGCAGCAGCAG
CAAAGGGACGACGGTGGGCGTGCGCGTGAGCAGATGTGATCTGTTCGTGGCGGCTAGGGTTAGGAGACACCGCATACTTA
TAGGCGCAGCCGCGTGGAGAGACGTGGGCTCGACCCACGTCCGAGTCCGTGA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS----------------------------S-----S-SS-SS-SSSSSSSS--------SSSSSSSSSSS
SSSSS----S-S-S-----------S-SS---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS---S-----S---------------------------S------------------S-S---SS-------S------
---------S----------------------------SSS-------S---------------------------SS--
--SS-S-S------------------------------------------------------------------------
-S-SSSSSSSSSSSSSSSS-----------S--------------------S-------S------S------------S
----SSSS------------------------------------------S--------S--------------------
--------------------------S------------------------------------SSS--------------
---SS--------------S----------------------------------------S------SS--------S--
-------S------------------------------------S-----------------------------------
--SS----------------SS--------------S-S-------------S--------S--S---------------
--------------SSS-------------S-----------------------------S---------S---------
------------S---------------------------------------------------S--SS-SS-S------
---S---------------------------S---------------------------------S---SS---------
-------------S-----------S----------------------------------------------------S-
----------------------------------------SSS----S----S------S--S---S-----SS----S-
----S--S---S------S-S---SS-------S--S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S----------
>forward_330
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------CATCCATCAG
GGCGAGTCTC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>reverse_1425
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GTGCAGGAGAGTGCTT
CTGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>forward_877
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CTCGATGTTTACTGCCCGGA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>reverse_1891
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ACGATCTGGTGAATGCACGT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
