>input_sequence_79008
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-------------------------------------------------------------------------AT-GGGT
TTTGTGAAACTAAATGTTGATGCTTCCTTTGATCACGATCTGCTTAGGGGCACGACAGGGGCTGTCCTTAGAGATGACAA
AGGAAGGTTCATTGTTGGCGGAAATTGGAGGATTGATTGGTGTGCCGATGTATTAACAACAGAAGAACT-AGCTCTAAGT
TTTGGC--TTAATCCTTGCACAGAAGGCGGGTTGCAATCGCCTTA-TTGTCAACTATGCTATTATGAAAGTGATTGACAC
AATGAAAA-TGGAGGACAA-TCGGCGGAA------GCGGCAGAGGCAGTGTTCGACAACTGCTATTTTATGGCATGTGAT
TATTCTGTTAGTAGGTTTGAACATTGTAATTTGGAAGCAAATAAGGTTTCTCATGAACTTGCTAGCCTAGT-GAAATTTT
CTGAGACTAGGGATTGGTGTGAAGAGCCTATGGATGATATTGTATCTTTTCTTA---TTAACGATGGTACTCTTATATCT
AATTAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----
>chr7B_1_TraesCS7B01G212700
ATAAAAAGTTGGGTGGGCCATAGAGCACAAACTTTTTCATGTTTTGAACCATATATGTACTATTTCATTAGATATTGCTT
ACTAGTTAGTACCGACAATTCTCATTGATTGATAGATGAGCAGATGCATATATATGACAAATGTTTCCTACAAGCAGTGG
TAGTTACCACCACTTGCGTTTTGTATGTTGTATGTAGTATCTGCCGGAACCGAGAGTATGTACGTGTACTATGTAGTATA
TAACAATGATTAGGTAGTATATATACTAATTTTTAGGTAGTATGTACCATTTTTTGAGTATGCTCATTTTTACGTACAAA
TATGTACGTATTTTACAAATATAACAAAAACTATGTGCTCATATGCAATTTTTTCATGTAACTTGCTTTGAATTATCTTA
GATATAGTATATGAACATATTTAAAATAATAAAATAGTATATATATATAGTACCACATGGTAGTATATGAGACATGTAGG
GTAACTACCACCGGGTGGTAGGATGGATTTTCCCTATATATAGATACACACACACACTACTAGTATAATACTACTCCAAA
CCAAAATAATTCATGAGATTTGACATACACTGCATGGAACTCTCTTGTGTCATGTTACGCTCACTAATAGACACATCAAA
TTTTTGCCCATCTGCCCATCATGCTCAAATGGGCCCGAAGACACAAAGCACGTCGTTTTTCTGTGTCAGAAGACGAAAGA
GGTTTGGGACAAGTTAGGATTGTATGAGGTGATCAATAGATCTTGTGTTGTCGACCGGTC-------GCAGTTCTTGAAT
TGTTACTACTTATGCCAGACCAAGA-CTATTTGTATTGGGACTCCAAGACGCACATGCATTGATCGCTATAACAACTTGG
TATCTATGATGGGATAGACGTAAACTGGTTTGTGAAGGAAAGTCTCAAGATGCACATCAAA-------------------
------GACGAACTGTGTTAATGCACACTCCCCTAAGGCAACCAGTAAAACAAGGGGATGGAGCAGACCTCCTAT-GGGT
TTTGTGAAACTAAATGTTGATGCTTCCTTTGATCACGATCTGCTTAGGGGCACGACAGGGGCTGTCCTTAGAGATGACAA
AGGAAGGTTCATTGTTGGCGGAAATTGGAGGATTGATTGGTGTGCCGATGTATTAACAACAGAAGAACT-AGCTCTAAGT
TTTGGC--TTAATCCTTGCACAGAAGGCGGGTTGCAATCGCCTTA-TTGTCAACTATGCTATTATGAAAGTGATTGACAC
AATGAAAA-TGGAGGACAA-TCGGCGGAA------GCGGCAGAGGCAGTGTTCGACAACTGCTATTTTATGGCATGTGAT
TATTCTGTTAGTAGGTTTGAACATTGTAATTTGGAAGCAAATAAGGTTTCTCATGAACTTGCTAGCCTAGT-GAAATTTT
CTGAGACTAGGGATTGGTGTGAAGAGCCTATGGATGATATTGTATCTTTTCTTA---TTAACGATGGTACTCTTATATCT
AATTAATAAAGTGTGATGTTTATTTCAAACAAAAAGTCATGAGATTTGACCATCTATACACCACTCG-AACCAAAATAAG
CCATGACATTTGACCATCTATATGCTACTCCAAAGCAAAATAAGCCATACCATTTGATCTTCCCCAACTTCAATAATGTC
ATCATTTTCATCATCTTTTTT---------------------------GACTAGCCTTGCTCACGGCTGCCTACACTATA
ATTTGTAACATGTAAAGAACAATTGAGTGAATTACTTATGCTACTCGCAGAACCACAAC-AATAGATTGGATTAGAAACG
TTGGTGTGAACATGTAAGCTTCAAATTGATTAGAAACCTTGCTGTGAACTTTT-AAGCTTCAAATCGATTAGAAACCTTG
G-TGTCAACAATTACGTTTCCAACCGCTAACAATTTTAGACCGTACCAAATAGATTGGATTATTTATCCAATTGGGGATT
TAGGGGATGATTCAATGAAAAAAGACCTAGTGGAAATAG------GGGAATAAAAATATGAACGATTCAATTCAATTTAC
AGGCGCAATCTCGTAGGGTTTAAGAATTTCCGATGATCG-ACGAAGGAGTTGCCTCGCCGCCGTCCACTACTGCCGCCAG
CCCTGCCGGTGGAGCATCTGAAAGCGGGGTGCATTTGAGTAGTGAGGCGGGAGGGAGGCACTGATGTGTGCCGGTGGCCG
GCGGCTGAGCTATGTGGGGTTGGTCGGCGGCGATTCCTATTTGGCGCTTCAGGCGCCTGTTTATATGCATTTTGCAAACG
GGCGCCTGTTTATATGCATTTTGCAAACGGGCGCCTGAAGGTCCTCCGTGCTGGGCCGGCCCAATTACCCTTATCTATTT
TTTTAAAGCGCAAAAAGTGCACTTGTAGAGAATTGAACCGGTGACCTCTCGCTTCGACAGATGTTGCACTAACCACAAGG
CCACTTCACCTGACCTGGTAAATTGCAACTCTTTTGTATTTTCTTCTTTGTTTTCTCCTTTTTCCTTTTTACCTTTTTCA
TTTT
>chr7D_1
ATAACAAGTTGGGTGGGCCAGAGAGCACTAACTTTTTCATGTTCTGAACCATATATGTACTATTTCATAAGATATTGCTC
ACTACTTAGTACCTACAATTCTCATTGATTGATAGATGAGCAAATGCATATATATATA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TATATATATATAT------------------------------
-------------------------------------------------------ACTACTAGTATAATACTACTCCAAA
CCATAATAATTCATGAGATTTGACATACACCGCATGGAACTCTCTTGTGTCGTGTTACGCTCGCTAATAGACACATCAAA
TTTTCGCCCATCTGCCCATCATGCTCAAATGGACCAGAAGACACAAAACACGTCGTGTTTCTGTGTCAGAAGACGAAAGA
GGTTTGGGACAACTTAGGATTGTATGAGGTCATCAATAGAGCTTGTGTTTTCGATCGGGC-AGAGAGACAATTCCTGAAT
TGTTACTACTTATGCGAGATCAAGAGCTATTTGTATTGGGACTCCAAAACGCACGTGAATTGATCGCTATAAGAACTTGG
TATCTATCATGGGATAGACGTAAACTGGTTTGTCAAGGAAAGTCTCAAGATGCACATCAAACTTCGATGGGGGCGCGTGC
TATAATGACAAACTATG---------------CTAAGGCAACAAGTAAAACAAGGGGATGGAGTAGACCTCCTAT-GGGT
TTTGTGAAACTACATGTTGATGCTTCCTTTGATCACGATCTGCTTAGGGGCACGGCAGGGGCTGTCCTCAGAGATGACAA
AGGAAGGTTCATTGTTGGCGGAAATTGGAGGATTGATTGGTGTGCCGATGTATTAACAGCAGAAGAACT-AGCTCTATGG
TTTGGC--TTAATCCTTACACAGAAGGCGGGTTGCAATCGCCTTA-TTGTCAACTCTGATAATATGGAAGTGATTGACAC
ATGGAAAA-TGGAGGACAA-TCGGCGGAA------GCGGCAGAGGCAGTGTTCGACGATTGCTATTTTATAGCATGTGAT
TTTTCTGTTAGTAGGTTTGAACATTGTAATAGGGAAGCAAATAAGGTTGCTCATGAACTTGCTAGGCTAGT-GAAATTTT
CTGATACTAGGGATTTGTGTGAAGAGTCTATGGATGATATTGTATCTTTTCTAA---TTAACGATGTTACTCTTATATCT
AATTAATAAAGTGTGATGTTTATTTCAAAAAAA--GTCATGAGATTTGACCATCTATACACCACTCG-AACCAAAATAAT
CCATGACATTTGACCATCTATATGCTACTCCAAAGCAAAATAAGCCATACCATTTGATCTTCCCCAACTTCAATCATGTC
ATCATTTTCATCATGTTTTTTT-----AAACCAAATCAATTCTTCGCTGACTACCCTTGCTCATGGCTGCCTATACTATA
ATTTGTAAACTATGAAGAACAATTGAGTGAATTACTTATGCTATTGGCAGAACCACAACAAATAGATTGGATTAGAAACC
TTGGTGTGAACATGTAAGCTTCAAATTGATTAGAAACCTTGCTGTGAACTTTT-AAGATTCAAATCGATTAGAAACCTTC
A-TGTCAACAATTACGTTTCCAGCCGCTAACAATTTTAGAGCGTACCAAATAGATTGGATTATTTAGCCAATTGGGGATT
TAGGGGACGATTCAATGAAC-AAGACCTAGTGGAAATAC------GGGAATAAAAATATGAATGATTCAATTCAATTTAC
CGGTGCAATCTTGTAG-GTTTAAGAATTTCATATGGATTAACGAAGGAGTTGCCTCGCTGCCGTCCACTAATGCCGCCAG
CCCCGCCGGTGGACCATCTGAAAGTGGGGTGCATTGTGA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr1D_578
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ATTTGGCGTACATTGCATGGAACCCTACCATGCCATGTTACGCTTACTAATAGACACATGAAA
GTTTTGCCCATCTGCCCATCATGCTCAAATGGGCCAGAAGACACAAAACACATCTTGTTTCTATGTCAGAAGGCGAAGGA
GGTTTGGGACAAGTTAGGATTGCATGAGGTGATCAATAGAGCTTGTGCTGTCAATCGACCAGGAGAGGCAATTTTTGAAT
TTGTACTCCTTATGCCAGACCAAGAATTGTCTATATTGGGTCTCCAGAACACACGTGAAGT-ATCGCTATAATAGCTTGG
TATTTATGGTGGGATATACGTAAACTAGTTCATGAAGGAAAGTTTCAAGATGCCCATCAAACTTCGATGGGT-CTCGTGC
CATAACGGCAAACTATGTTAATATCAACTCCCCTAAGGCAACCAGTAAAATAGGGGGATGGACTTGTCCTCCTATGGGTT
TTTGTTAAACCGAATGTTGATGCTTCTTTTTATCATGATCTGCTTAGGGGCACGGCGGAGGCTATTCTCAGAGATGACAG
AGGAAGGTTCATTGTTGGCGATAATTGGAGGATGGATTAGTGTGCCGATGCACTAACAGCAGAAGCA-TTGGCTCTTAGG
TTTGGCTTTTACTCCTTGCACAGAAGGCGGGTTGCAATCGCCTTA-TTGTCAACTCTGACAATATGGAAGTGATTGCCAC
GATGAAGAATTGAGGAC-A-TCAACGGAA------GCGGCGGCGGCTGTGTTCGACGATTGCTAC-----------TGAT
TTTTTGATTACTAGGTTTGAACATTGTAATAGGGAAGCAAATAAGGTTACTCATGAACTTGCTAGGCTAAC-GAAATTTT
CTGTGACAAGGGATTGGTTTGAAGAGCCTATGGAGGATATTTTATCTTTTCTTA---TTGACGATGTAACTATTATTTCT
AATTAATAAAGTGTGATGTTTATTTCAGAAAAA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr1A_578
ATTTG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CGTACATTACATGGAACCCTCCCGTGCCATGTTACGCTTACTAATAGACACATGAAA
GTTTTGCCCATCTGCCCATCATGCTCAAATGGGCCAGAAGACACAAAACACATCTTGTTTCTATGTCAGAAGGCGAATGA
GGTTTGGGACAAGTTAGGATTGCATGAGGTGATCAATAGAGCTTGTGCCGTCGATCGACCGAGAGAGGCAATTTTTGAAT
TTTTACTCCTTATGCCAGACCAAGAATTATCTATATTTGGTCTCCAGAACACACGTAAAGTGATCGCTATAACAGCTTGG
TATTTATGGTGGGATATACGTAAACTGGTTCATGAAGAAAAGTTTCAAGATGCCCATCAAACTTCGATGGGGGCTCGTGC
TATAACGGCAAACTATGTTAATACCAACTCCCCTAAGGCAACCGGTAAAATAGGGGGATGGACTACTCCTCCTGTGGGTT
TTTGTTAAACCGAATGTTGATGCTTCTTTTGATCATGGTATGCTTAGGGGCACGGCAGAGGCTATTCTCAGAGATGATAA
AGGAAGGTTCATTGTTGGCGGAAATTGGAGGAAGGATTAGTGTGCTGATGTAGTAACAACAGAAGTATT-GGCTCTTAGG
TTTGGC--TTACTCCTTGCACAGAAGGTGGGTTGCAATCGCCCTA-TTGTCAACTCTGACAATATGGAAGTGATTGCCAC
GATGAAGAATTGAGGAC-A-TCAGCGGAA------GCGGCGGCGGCAGTGTTCGATGATTGCTACTTTATGGCTTGTGAT
TTTTCGATTACTAGGTTTGAACATTGTAATAGGGAAGCAAATAAGGTTGCTCATGAACTTGCTAGGCTAAC-AAAATTTT
CCGTGACAAGGTATTGGTTTGAGGAGCCTATGGAGGATATTGTATATT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr2B_581
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TGACATACATTGCATGGAACTCTCCCATGCCGTGTTACGCTCGCTAATAGACACATGAAA
ATTTCGCCCATCTGCCCATCATGCTCAAATGGTCCAGAAGACACAAAACACGTCTTGTTTCTGTGTCAGAAGGCGAAAGA
GGTTTGGAACAAGTTAGGATTGTATGAGGTGATCAATAGAGCTTGTAGTGTCGATCGGGCGGGAGAGGCAGTTCTTGAAT
TGTTACTACTTATGCCAGACCAAGAATTATTTGTATTGGGACTCCAGAACGTACGTGAATTGATTGCTATAACAACTTGG
TATCTATGGTGGGATAGACGTAAACTGGTTCATGAAGGAAAGTCTCAAGATGCACATCAAACTTCGATGGGGGCTCGTGC
CATAACGGCGAACTATGTTAATGCACACTCCTCTAAGGCAACCAGTAAAATAAGGGGATGGAGCAGACCTCCTAT-GGGT
TTTGTGAAACTAAATGTTGATGCTTCCTTTGATCACGATCTGCTTAGGAGCACGGCAGGGGCTGTCCTCAGAGATGACAA
AGGAAGGTTCATTGTTGGCGGAAATTGAAGGATTGATTGGTGTGTTGACGTATTAACAGCAGAAGCA-T-AGCTCTAAGG
TTTGGC--TTAATCCTTGCACAGAAGGTTGGTTGCAATCGCCTTA-TTGTCAACTCTGATAATATGGAAATGATTGACAC
AATGAAAAATGGAGGAC-AATCAGCGGGT------GCGGCAACAGCAGTGTTCGACAATTGCTATTTTATGGCATGTGAT
TTTTCTGTTACTAGGTTTGAACATTGTAATAGGGAAGCAAATAAAGTTGCTCATGAACTTGCTATACTAGTGAAAATTTT
CAGAGACTAGGGATTGGTGTGAGGAGCCTATGGAGGATATTGTATCTTTTTTTA---TTGATGATGTAACTCTTATTTCC
AATTAATAAAGTGTGATATTTATTTTTAAAAAAAAGT-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr2B_584
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CATACATTGCATGGAACTCTCCCGTGCCGTGTTACGCTCGCTAATAGACACATGAAA
ATTTTGCCCATCTGCCCATCATGCTCAAATGGGCCAGAAGACACAAAACACGTCTTGTTTCTATGTCAGAAGGCGAAAGA
GGTTTGGAACAAGTTAGGATTGTATGAGGTGATCAATAGAGCTTGTAGTGTCGATCGGGCGGGAGAGACAGTTCTTGAAT
TGTTACTACTTATGCCAGACCAAGAATTATTTGTATTGGGACTCCAGAACGTACGTGAACTGATTGCTATAACAACTTGG
TATCTATGGT-GGATAGACGTAAACTGGTTCATGAAGGAAAGTCTCAAGATGCACATCAAACTTCGATGGGGGCTCATGC
CATAACGGCGAACTATGTTAATGCACACTCCCCTAAGGCAATCAGTAAAACAAGGGGATGGAGCAGACCTCCTAT-GGGT
TTTGTGAAACTAAATACTGATGCTTCCTTTGATCACGATCTGCTTAGGAGCACAACAGGGGCTGTCCTCAGAGATGACAA
AGGAAGGTTCATTGTTGGCGGAAATTGGAGGATTGATTGGTGTGTTGATGTATTAACAGGAGAAGCACT-AGCTCTAAGG
TTTGGC--TTAATCCTTGCACAGAAGGCTGGTTGCAATCGCCTTA-TTGTCAACTCTGATAATATGGAAGTGATTGACAC
AATGAAAAATGGAGGAC-AATCAGCGGGT------GCGGCAGCGGCAATGTTCGACGATTGCTATTTTATGGCATGTGAT
TTTTCTGTTAC-AGGTTTGAACATTATAATAGGAAAGCAAATAAGGTTGCTCATGAACTTGCTAGACTAGC-GAAATTTT
CAGAGACTAGGGATTGGTGTGAGGAGCCTATGGAGGATATTGTATCTTTTCTTA---TTGATGATGTAACTCTTATTTCC
AATTAATAAAGTGTGATGTTTATTTAAAAAAA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr3B_584
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CATACATTGCATGGAACTCTCCCGTGCCGTGTTACGCTCGCTAATAGACACATGAAA
ATTTCGCCCATCTACCCATCATGCTCAAATGGGCCAGAAGAGACAAAACACGTCTTGTTTCTGTGTCAGAAGGC-AAAGA
GGTTTGGAACAAGTTAGGATTGTATGAGGTGATCAATAGAGCTTGTAGTGTCGATCGGGCGGGAGAGACAGTTCTTGAAT
TGTTACTA-TTATGCCAGACCAAGAATTATTTGTACTGGGACTCCAGAATGTACGTGAATCGATTGCTATAACCACTTGA
TATCTATGGTGGGATAGACGTAAACTGGTTCATGAAGGAAAGTCTCAAGATGCACATCAAACTTCGATGGGGGCTCGTGC
CATAACGGCGAACTACGTTAATGCACACTCCCCTAAGGCAACCAGTAAAATAAGGGGATGGAGCAGACCTCCTAT-GGGT
ATTGTGAAACTAAATGTTGATGTTTCCTTTGATCACGATCTGCTTAGGATCACGGCAGGGGCTGTCCTCAGAGATGACAA
AGGAAGGTTCATTGTTGGCGGAAATTGGAGGATTGATTGGTGTGTTGATGTATTAACAGCAGAAGCACT-AGCTCTAAGG
TTTGGC--TTAATCCTTGCAGAGAAGGCTGGTTGCAATCGCCTTA-TTGTCAACTTTGATAATATGGAAGTGATCGACAC
AATGAAAAATGGAGGAC-AATCAGCGGGT------GCGGTAGCGGCAGTGTTCGACGATTGCTATTTTATGGCATGTGAT
TTTTCTGTTACTATGTTTGAACATTGTAATAGGGAAGCAAATAAGGTTGCTCATGAACTTGCTAGACTAGC-AAAATTTT
CAAAGACTAGGGATTGATGTGAGGAGCCTATGGAGGATATTGTATCTTTCCTTA---TTGATGTTGTAACTCTTATTTCC
AATTAATAAAGTGTGATGTTTATTTCAAAAAAAA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr7B_586
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TACATTGCATGGAACTCTCCCGTGTCGTGTTACGCTCGCTAATAGACACATGAAA
ATTTCGCCCATCTGCCCATCATGCTCAAATGGGCCAGAAGACACAAAACACGTCTTGTTTCTGTGTCAGAAGGCGAAAGA
GGTTTTGAACAAGTTAGGATTGTATGAGGTGATCAATAGAACTTGTAGTGTCGATCGGGCGGGAGAGGCGGTTCTTGAAT
TGTTACTACTTATGACAGACCAAGAATTATTTGTATTGGGACTCTAGAACATACATGAATTGATCGCTATAACAACTTGG
TATCTATGGTGGGATAGACGTAAACTGGTTCATGAAGGAAAGTCTCAAGATGCACATCAAACTTTCATGGGGGCTCGTGC
CATAACGGCGAACTACGTTAATGCACACTCCCCTAAGGCAACCGGTAAAACAAGGGGATGGAGCAGACCTCCTAT-GGGT
TTTGTGAAACTAAATGTTGATGCTTCCTTTGATCACGATCGGCTTAGGAGCACGGTAGGGGCTGTCCTCATAGATGACAA
AGGAAGGTTCATTGTTGGCGGAAATTGGAGGATTGATTGGTGTGTTGATGTATTAACAGCAGAAGCACT-AGCTCTAAGG
TTTGGC--TTAATCCTTGCACAGAAAGCGGGTTGTAATCGCCTTA-TTGTCAACTCTGATAATATGAAAGTGATTGACAC
AATGAAAAATGGAGGAC-AATCAACGGGT------GCGGCAGCGGCAGTGTTCGACGACTGCTATTTTATGGCATGTGAT
TTTTCTGTTACTAGGCTTGAACATTGTAATAGGGAAACAAATAAGGTTGCTCATGAACTTGCTAGACTAGC-AAAATTTT
CAAAGACTAGGGATTGGTGTGAGGAGCCTATGGAGGATATTGTATCTTTTCTTA---TTGATGATTTAACTCTTATTTCC
AATTAATAAAGTGTGATGTTTATTTCAAAATAAAAGT-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr4B_586
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TACATTGCATGGAACTCTCCCATGTCATGTTACGCTCGCTAATAGACACATGAAA
ATTTCGCCCATCTACCCATCATGCTCAAATGGGCCAGAAGACACAAAACACATCTTGTTTCTGTGTCAGAAGGCGAAAGA
GGTTTGGAACAAGTTAGGATTGTATGAGGTGGTCAATAGAGCTTGTGGTGTCGAT-GGGCAGGAGAGACAGTTCTTGAAT
TGTTACTACTTATGCCAGACCAAGAATTATTTGTATTGGGACTCCAGAACGTACGTGAATTCATTGCTATAACAACTTGG
TATCTATGGTGGGATAGACGTAAACTGGTTCATGAAGGAAAGTCTCAAGATGCACATCAAACTTCGATGGGGGCTCGTGA
CATAACGGCGAACTACGTTAATGCACACTCCCTTAAGGCAACCAGTAAAACAAGGGGATGGAGCAGACCTCCTAT-GGGT
TTTGTGAAACTAAATGTTGATGCTTCCTTTGATCACGGTCTGCTTAGGAGCACGGCAGGGGCTGTCCTCAGAGATGACAA
AGGAAGGTTCATTGTTGGCGGAAATTGGAGGATTGATTGGCGTGTTGATGTATTAACAGCAGAAGCACT-AGCTCTAAGG
TTTGGC--TTAATCCTTGCATAGAAGGCGGGTTGCACTCGCCTTA-TTGTCAACTCTGATAATATGGAAGTGATTGACAC
AATGAAAA-TGGAGGAC-AATTAGCGGGT------GCGGCAGCGGCAGTGTTCGATGATTGCTATTTTATGGCATGTGCT
TTTTCTGTTACTAGGTTTGAACATTGTAATAGGGAAGCAAATAAGGTTGCTCATGAACTTTCTAGACTAGC-GAAATTCT
GAGAGACTAGGGATTGGTGTGAGGAGCCTATGGAGGATATTGTATCTTTTCTTC---TTGATGATGTAACTCTTATTTCC
AATTAATAAAGTGTGATGTTTATTTCAAAAAAAAGT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr4B_586
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TACATTGCATGGAACTCTCCCGTGCCGTGTTATGCTTGCTAATAGACACATGAAA
ATTTTGCCCATCTGCCCATCATGCTCAAATGGGCCAGAAGACACAAAACACGCCTTGTTTCTGTGTCAAAAGGCGAAAGA
GGTTTGGAACAAGTTAGGATTGTATGTGGTCATCAATAGAGCTTGTAGTGTCGATCGGGCAGGAGAGACAGTTCTTGAAA
TGTTACTACTTATGCTAGACCAAGAATT----GTATTGGGACTCCAAAACGTACGTGAATTGATTGCTATAACAACTTGG
TATCTATGGTGGGATAGACATAAACTGGTTCATGAAGGAAAGTCTCAAGATGCACATCAAACTTCGATGGGGGCTCGTGC
CATAACGGCGAACTACGTTAATGCACACTCCCCTAAGGCAACCAGTAAAATAAGGGGATGGACCAGACCTCCTAT-GGGT
TTTGTGAAACTAAATGTTGATGCTTCCTTTGATCACGATCTGCTTAGGAGCACGACAGGGGATGTCCTCAGAGATGACAA
AGGAAGGTTCATTGTTGGCGGAAATTGGAGGATTGATTGGTGTGTTGATGTATTAACAACAGAAGCACT-AGCTCTAAGG
TTTGGC--TTAATCCTTGCACAGAAGGCTGGTTGCAATCGCATTA-TTGTCAACTTTGATAATATGGAAGTGATTGACAC
AATAAAAAATGGAGGAC-AATCAGCGGGT------GCAGCAGTGGCAGTGTTCGACGATTGCTATTTTATGGCATGTGAT
TTTTTTGTTACTAGGTTTGAGCATTGTAATAGGGAAGCAAATAAGGTTACTCATGAACTTGCTAGACTAGC-GAAATTTC
CAGAGACTAGGGATTGGTGTGAGGAGCCTATGGATGATATTGTATCTTTTCTTA---TTGATGATGTAACTCTTATTTCC
AATTAATAAAGTGTGATGTTTATTTCAAAAAAAAA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr3D_586
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TACATTGTATGGAACTCTCCCGTGTCGTGTGACGCTCGCTAATAGACACATGAAA
ATTTTGCCCATCTGCCCATCATGCTCAAATGGGCCAGAAGACACAAAACACGTCTTGTTTCTGTGTCAGAAGGCGAAAGA
GGTTTGGGACAAGTTAGGATTGTATGAGGTGATCAATAGAGCTTGTGGTGTCGATCGGGCGAGAGAGACAGTTCTTGAAT
TGTTACTACTTATGCCAGATCAAGAATTATTTGTATTGGGACTCCAGAACGTATGTGAATTGATCACTATAACAACTTGG
TATCTAT--TGGGATAGACGTAAACTGGTTCATGAAGGAAAGTCTCAAGATGCACTTCAAACTTCGATGGGGGCTCGTGC
CATAACGACAAACTACGTAAATGCACACTTCCCCAAGGCAACCAGTAAAACAAGGGGATGGAGTAGACGTCCTAT-GGGT
TTTGTGAAACTAAATGATGATGCTTCCTTCGATCACGATCAGCTTAGGAGCACGGCAGGGGCTGTCCTGAGAGATGACAA
AGGAAGGTTCATTGTTGGGGGAAATTGGAGGATTGATTGGTGTGCTAATGTATTAACAGCAAAAGCACT-AGCTCTAAGG
TTTGGC--TTAATCCTTGCACAGAAGGTGGGTTGCAATCGCCTTA-TTGTCAACTCTGATAATATGGAAGTGATTGACAC
AATGAAAAATGGAGGAC-AATCGGCGGGT------GC------GGCAGTGTTCGATGATTGCTATTTTATGTCATGTGAT
TTTTCTGTTACTAGGTTTGAACATTGTAATAAGGAAGCAAATAAGGTTGCTCATGAACTTGCTAAACTAGC-GAAATTTT
CTGAGACTAGGGATTGGTGTGAGGAGCCTGTGGATGATACTGTATCTTTTCTTA---TTGATGATGTAACTCTTATTTCC
AACTAATAAAGTGTGATGTTTATTTTAAAAAAAAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr5B_586
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TACATTGCATGGAACTCTCCCGTGCCGTGTTACGCTCGCTAATAGACACATGAAA
ATTTCACCCATCTGCCCATCATGCTCAAATGGGCCAGAAGACACAAAACACGTCTTGTTTATGTGTCAGAAGGCGAAAGA
GGTTTGGAACAAGTTAGGATTGTATGAGGTCATCAATAAAGCTTGTAGTGTCGATCGGGCGGGAGAGACAGTTCTTGAAA
TGTTACTACTTATGCCAGACCAAGAATTATTTGTATTGGGACTCAAGAACGTACGCGAATTGATTGCTATAACAACTTGG
TATCTATGGTGGAATAGACGTAAACTGGTTCATGAAGGAAAGTCTCAAGATGCACATCAAACTTCGATGGGGGCTCGTGC
CATAACGGCGAACTACGTTAATGCACACTCCACTAAAACAACCAGTAAAATAAGGGGATGGAGGAGACCTCCTAT-GGGT
TTTGTGAAACTAAATGTTGATGCTTTTTTTGATCACGATCTGTTTAGGAGTACGGCAGGGGCTGTCCTCAGAGATGACAA
AGGAAGGTTTATTGTTGGCGGAAATTGGAGGATTGATTGGTGTGTTGATGTATTAACGGTAGAAGCACT-AACTATAAGG
TTTGGC--TTAATCCTTGCACAGAAAGCTGGTTGCAATCGCCTTA-TTGTCAACTCTGATAATATGAAAGTGATTGACAC
AATGAAAAATGGAGGAC-AATCAGCGGGTGCGGCAGC------GGCAGTGTTCGACGATTGCTATTTTATGGCATGTGAT
TTTTCTGTTACTAGGTTTGAACATTGTAATAGGGAAGCAAATAAGGTTGCTCATGAACTTGCTAGACTAGC-GAATTTTT
CAGAGACTAGGGATTGGTGTGAGGCGCCTATGGATGATATTGTATCTTTTTTTA---TTGATGATGTAACTCTTATTTCC
AATTAATAAAGTGTTATGTTTATTTAAAAAAAAAAG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr2B_619
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GCTCACTAATAGACACATGAAA
ATTTTGCTCATCTGCCCATCATGCTCAAATGGGCCAGAAGACACAAAACACATCTTGTATCTGTATCAGAAGGCGAAAGA
GGTTTGGAACAAGTTAGGATTGTATGAGGTGATCAATAGAGCTTGTTGTGTTGATCGGGTGGGAGCGACAGTTCTTGAAT
TGTTACTACTTATGCTAGACCAAGAATTATTTGTATTGGGACTCCAGAACGCACGTGAATTGATCGCTATAACAACTTGG
TATCTATGGTGGGATAGACGTAAACTGGTTCATGAAGGAAAGTCTCAAGATGCACATCAAACTTCGATGGGGGCTTCTGC
CATAACAGCGAACTACGTTAATGCACACTCCCCTAACGCAACCAGTAAAACAAGGGGATGGAGCCGACCTCCTAT-GGTT
TTTGTGAAACTAAATGTTGATGTTTCCTTTGATCACGATCTACTTAGGAGCACGACATGGGCTGTCCTCAGATATGACAA
AGGGAGGTTCATTGTTGGCTGAAATTGAAGAATTGATTGGTGTGTTGATGTATTAACAGCAGAAACACT-AGCTCTAAGG
TTTGGC--TTAATCCTTGCACAGAAGGCGGGTTGCAATCGCCTTA-TTGTCAACTCTGATAATATGGAAGTGATTGACAC
AATGAAAAATGGAGGAC-AATCAGCGGGT------GCGGAAACGGTAGTGTTCGACGATTGCTATTTTATGGCATGTGAT
TTTTCTGTTACTAGGTTTGAACATTGTAATAGGGAAGCAAATAAGGTTGTTCATGAACTTGCTAGACTAGC-GAAATTTT
CCGAGACTAGGGATTGGTGTGAGAAGCCTATGGAGGAT------------------------------------------
--------------------------------------------------------------------------------
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----
>chr5D_936
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--------CGAACTATGTTAATGCACACCGCCCTAAGGCAACCAGTAAAACAAGGGGATGGAGCAGACCTCCTAT-GTGT
TTTGTGAAACTAAATGTTGATGTTTCCTTTGATCACGATCTGCTTAGGGACACGGCAGGGGCTGACCTCAGAGATGACAA
AGGAAGGTTCATTGTTGGCGGAAATTGGAGGATTGAATTGTGTGCCGATGTATTAAGAGCAGAAGCACT-ACCTCTAAGG
TTTGGC--TTAATCCTTGCACAGAAGGCGGGTTGCAATCGCCTTA-TTGTCAACTCTGATAATATGGAAGTGATTGACAC
AATGAAAAATGGAGGAC-CATCGGCGGGAGCGGCAGC------GGCAGTGTTCGACGATTCCTATTTTATGGCATGTGAT
TTTTTTGTTACTAGGTTCGAACATTGTAATAGGGAAGCAAATAAGGTTGCACATGAACTTGCTAGGCTAGC-GAAATTTT
CTGAGACTAGGGACTGGTGTGAGGAGCCCATGGATGATATTGTATCTTTTCTTA---TTGACGATGTAACTCTTATATCT
AATTAGTAAAGTGTGAAGTTTATTTCAAAAAAA-----------------------------------------------
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----
>chr5B_938
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----------AACTATGTTAATGCACACTCCCCTAAGGCAACCAGTAAAACAAGGGGATGGAGTACACCTCCTAT-GTGT
TTTGTGAAACTAAATGTTGATGCTTCCTTTGATCATGATCTGCTTAGGGGCACGGCAGGGGCTGACCTCAGATATGACAA
AGGAAGGTTCATTGTTGGCGAAAATTGGAGGGTTGAATTGTGTGCCAATGTATTAACAACAGAAGCACT-AGCTCTAAGG
TTTGGC--TTAATTCTTGCACAGAAGGCGGGTTGCAATCGCCCTATTTGTCAACTCTGATAATATGGAAGTGATTGACAC
AGTGAAAAATGGAGGAC-AATCGGCGGCAGCGGCAGC------GGCAGTGTTTGACGATTGCTATTTTATGGCATGTGAT
TTTTCTGTTACTAGGTTTGAACATTGTAGCAGGGAAGCAAATAAGGTTGCTCATGAACTTGCAAGGCTAGT-GAAATTTT
CCGAGACTAGGGATTGGTGTGAGGAGCCTATGGGTGATATTGTATCTTTTCTTATTATTGATGATCTAACTCTTATATCT
AATTAATAAAGTGTAAAGTTTATTTCAAAAAAA-----------------------------------------------
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----
>chr4A_1501
AAAGAAGC------------------------------------------------------------------------
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-------------------------------------CATGACATTTGTCCATCTATACGCTTCTCCAAACCAAAATAAG
CCATGACATTTGACCATCTATATGCTACTCCAAAGCAAGATAAGCCATACCATTTGATCTTCCTCAACTTCAATCATGAA
AACATTCTTATCACCTTTTTTCTTCTAAAACCAAATCAATTCT--------TAGCCTTCCCCATGGCTGCCTACACTATA
ATTTGTAAC-TGTAAACAACAATTGAGTGAATTACTTATGCTATTGGCAGAACTATAGCAAATAGATTGGATTAGAAACC
TTGGTGTGAACTTGTAAGCTTCAAATCGATTAGAAACCTTGCTGTGAACTTGTAAAGCTTCAAATCAATTAGAAACCTTG
GTTGTTAACAATTACGTTTCCAGCCACTAACAATTTTGGACAATACCAAATAGATTGGGTTATTTAGCCAATTGGGGATT
TAGCGGATGATTCAATGAAGAAAGACCTAGTGGAAATAGGGGTCGGGGAATGAAAATATGAACGATTCAACTCAATTTAC
CAGCGAAATCTTGTAGGGATTCATATTTTCAAATGGATCAGAGAAGGACTTGCCTCGCTGCTATCCACTACTGCCGCCAG
CCTCGCCAGTGGACCATCTGAATGTGGGTTGCATTGGACTAGTGGGGCGGGAGGGAGGCACTGATGCGTGCCGGCGGCTC
C-------GCTATGAGGGGGTGGTCGACGGTGATTCCTATTTGGCGCTTGAAGTACCCAATTATATGCATTTAG---ACG
GGCGCC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>SNPs
--------------------S-------S--------------S------------------------S----------S
----S--------S----------------------------S------------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------
---S----------------------------------------------------------------------------
-----------------------------------S-----------S--------S-----------------------
----------------------------------------S-------------S---S---------------------
-----------------------------------------------S---------S----------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------S-----------
-------------------------------------------------------------------------------S
-------------------------------------------------------S--S--S------------------
--------------------------------------------------------------------------------
-S----------------------------SS----------------S----------------S--------------
------------------------------------------------------------------S-------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------S-----
---------------------------------------------------------------S----------------
---------S---------------------------------S-S---------------------------------S
--------------------------------------------------------------------------------
----------------------S-------------------------------------------S-------------
-------------------S------------------------------------------------------------
S----------S------------------SS---SSSS-------------------S---------------------
---S---------S----------S----------S--S-----S---------------------S-------S---SS
SSSSSSSS------S----S------S---S------------------S-S-SS--SSS------------S-SSS---
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS
>forward_216
--------------------------------------------------------------------------------
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------------------------------------GTATCTGCCGGAACCGAGAG------------------------
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----
>reverse_2247
--------------------------------------------------------------------------------
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------GAGCTATGTGGGGTTGGTCG------------------------------------------------------
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----
