>input_sequence_79001
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---ATGAAGCTGTGGAGCGAAGTACCTCCGAACAGGGCCTATATTTCCCTATATAAACT--CTATGCATCCATGGCTCGG
CCAACTGAAAGCACACACAAAGACAAGACAACGCTACACGAGGG-CATTATGGTTTCCGCCATGAAGCTGTCCGTCACCC
TCGTCCTCCTCCTCTCAGGTACGTCCA---------TCGTAAATTCGCATCCGG--TCCGG-----------TGAGAGAT
GGATTCTTTTTGACAAATTTTGTATGCGTCTGCTGGCCGGATGAA-CCTGCAGGGCTCGTGGTGTTCGGGGAGATCGCGG
ACGCCAAGGCCAAGGCGCCGTGCGCCGTGGTGTGCTTCCAGGGAGGCCACATCACCTGCGACAACTACCCCGGCCAGGAG
CTCGACGGGTGCGACTGCGAGTGCGCGCCGGCAGACGGCAAGGGCTGCGTGCTACACCTCGACGACGGCGTGACCCACAC
CAACTGCCGCACGCCCAATATG---TAG----------------------------------------------------
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>chr4D_1_TraesCS4D01G063200
ATTTTTT-------------------------------------------------------------------------
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----------------------ATGTCGCGAACATTTTTGTAGATCACAACTGTTTTTTG-AATTCATGAACTTGTGAAG
TTCTTAATTTTTTAAATAAAACAGAAAATTAATAATCATGATGAATTCATGAAT--TTTTTTTGAATGGACGAACAT---
-------------TTTTTTCAAACCACAGACCTTTTCTGTATTCGTGTACATTTTTCTTAAATGCATGAACATTTTTCTA
AATTGCGAACATTTTCTAAACGTGTGAACATATTTAAATTTGGTGGCAGTATTTTAACATAAGAAG--------------
---------------CAGGTCGGAGTAAAAAAGCCTGGCCGAAAACTCGATGAGACAAAAATTACTAGTGCGCACAATAC
CGCAGTGTGCTGACCCATTTTAGGTTCCAGCCCAGTGCGATTGGTGACTTT-------CCAGCGCACTGCATGTGCGCGC
GGAA---------------------AGGAGCCTTTGTGCGTCGTCCACCTCGCTGACGGCTC------GACTGAGAGGTG
CT------GAACCCGAACCTTTTCCATTTGTATTTCTATTTGAATCAGATAGAAAAAGCACTTGCGAGGATGCTTCCCTG
GCTG-------------CTCAAACTAGTGTCTGCATGGCACTTGGGAAAGTGA----TCAGTGGTGCTGGTTAA-TTGCG
AGTAACTAAGACAGTCTCCCGCTTGAGCCAATCCCTAGCGTTTTGCTGCTACCTTTCAACTGAGATGAAATCGCGGCAGC
ACACGCAAGAAGACGCGGCGATCTCTTCATCAAATCTAGCAGTGAAACTGTTAGCCGCTTCTTATCCGAAAGGGGGG--A
AAGTGCAGAGCGCGCACTGTTCGGGTCAGAGAGCGCGGCGGATCCGTATCAGTTTAGTCTAAGACGTACGCTGACTGACA
AAAGCGATAGCAAACTCGATCCCTGCATCTCCATGCTCTAAGTCAATGAAATCGCCACGCCAGAGATTTCGAGGCCGTTC
GAAATTCCACCAGCTCCGGAGAGCTGCGGAGCCAGTAAACTGGCGCTCCGCAAATTTCAACTATAACTCCACCAGCTCCT
GGAATGAAGCTGTGGAGCGAAGTACCTCCGAACAGGGCCTATATTTCCCTATATAAACT--CTATGCATCCATGGCTCGG
CCAACTGAAAGCACACACAAAGACAAGACAACGCTACACGAGGG-CATTATGGTTTCCGCCATGAAGCTGTCCGTCACCC
TCGTCCTCCTCCTCTCAGGTACGTCCA---------TCGTAAATTCGCATCCGG--TCCGG-----------TGAGAGAT
GGATTCTTTTTGACAAATTTTGTATGCGTCTGCTGGCCGGATGAA-CCTGCAGGGCTCGTGGTGTTCGGGGAGATCGCGG
ACGCCAAGGCCAAGGCGCCGTGCGCCGTGGTGTGCTTCCAGGGAGGCCACATCACCTGCGACAACTACCCCGGCCAGGAG
CTCGACGGGTGCGACTGCGAGTGCGCGCCGGCAGACGGCAAGGGCTGCGTGCTACACCTCGACGACGGCGTGACCCACAC
CAACTGCCGCACGCCCAATATG---TAGCTGAATTGTTGGTTTGAGTTTGAGTTCAATAAGGCTCTGCAAGTTTGTTGTC
GACTGTAACGAAAATGTTCGCGTGTCTCTGGTTTGGCAGTGTAATTTAACTTT-ACACGCTTCGAATAAAATTTCCGACC
ATAATGTGTTGAGGCTCATAAAAGTA------CGCACAATAATATTAGAGATTTTACAGTACCCTGATACTCTATAAGCG
CATCTTCAACGGCAACCCGCAAATTTCTT-ACCGCATCTATC--CATGGATAAGGGG-ACCGGTCCACGGGCACAGGACG
CGGGAGGACACCATCCAACGCTAGCCGCATACATTTCAAATTGTTTTT-C-AACAAACTGGATG-AAATTCATGCAAACT
CGGCCGGATTTCACATAAACATGATGGATTTCATACAAACCGGACGAATAATGTTACATTTTAAACATATTTTA-ACAAA
AAAAGGTAAAACTATGT----GCACGTGCAGTCGCGCGGAGCTTCACTCCTATGACACGGACTACACTAG-ACTAGTCTA
CGGCCGGCCCTGGCGGATCCCTTCGTCTTTCCCATGTCCGGCTGCCCAC--TAACCGGACTACGGGGAGTCTTGTAAGCA
TATTCTTTCACCGTATCTTCCCTATGTCCGGCCACGCCGCTCATCAGAGTGGCAAAGAGGATGCTTCAGTTGAA-GGGAA
-GG-TGCTTCCGTGGAGTCCAGATGGGTGTGCCAACGATGGTCTGAGATAAAGACCGGACATGTCACCAACTGTACAAGC
TGGCGACGCGCCGGCGGTGGCCTCCATTGGATACAAGCGGTGGCGGGCTCCCGTGTTCTACTTCTCCTTGATGATGGCGG
CGGGCGTGGATATGCGGGCCATCACCTCGTCGACATCCGCACAGCTGACTTCTTTCTTTGCATGCATGGCGCGGCTACGT
GCGCATCGAAGGAGGATGGCGCGGTCGCAGGCACTGGATGCGGCGATGCCCGCGCCGCCGTGCTCC-CCGCCGTGCCGGG
ATGGAGCAACTCGC
>chr4B_1
ATTTT---------------------------------------------------------------------------
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--------------------TTATGCCGCGAACATTTTTTTAGACCACAAACATTTTTTG-AATTCATGAACTTGTGAAG
TTGTGA---TTTTT--AAAATAAAAAATATAAAAATCATGATGAATTCGTGAAT--TTTTTGAATGCACAAACTTTTTCC
AAAATCGTGATCATTTTTTCAAACTCCAGAGCTTTTCTGTATTCGTGTACATTTTTCTTAAC-GCATGAACATTTTTCTA
AATTGCGAACATTTTCTAAACGTCTGAACATATTTAAATTTTGTGGCAGTATTTTAACATAAGAAACAGGCCCTCGAAAA
AAAAAACATAAGAAACAGGTCGAAGTAAAAAAGCTTGGCCGAAAACTCGATGAGACAAAAATTACTAGTGCGCATAATAC
GGCAGTGTGCTGGCCCATTTTAGGTCCCAGCGCAGTGCGATTGGTGACTTTTTCCAGCGCAGTGCAGTGCGCGATTGGTG
ACTTTCCAGCGCATGGGCGCGGAACAGGAGCCTTTGTGCGTCGTCCGCCTCGCTGACGGCTC------GACTGAGAGGAG
CT------GAACCTGAACCTTTTCCATTTGTATTTCTATTTAAATCAGATAGAAAAAGCATTTGCGAGGATGCTTCCGTT
CCCTGGCTGCTC--------TAATTAGTGTCCACATGGCACTTCGGAAAATGA----TCAGTGGTGC-------------
----------------------------CAATCCCTAGCGATTTGTTGCCACCTTTCAACTGAGATGAAATCGC-GCCGC
ACACGCAAGAAGACGCCGCGATCTCTTCATCAAATCTA---GTGAAACTGTTAGCCGCTTCTTATCCAAAAGGGAGAAAA
AAATGCAGAGCTTGCACTGTTCGGGTCAGAGAGCGCGGCGGATCCGTATCAGTTTAGTCTAAGACGTACGCTGATTGACA
AAAGCGCTAGCAAACTCGATCAATGCATCTCCATGCTCAAAGTCAACGAAATCGCCACGCCAGAGATTTC----------
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------------------------------------------ATTTCCCTATATAAACTGCCTAGGCTTCCATGGCTCTG
CCAACTCAAAGCACACACAAAGG-----CAACGCTACACCAAGATCATTATGGTTTCGGCCATGAAGCTGTCGGTCACCA
TCGTCCTCCTCCTCTCAGGCACGTCCACTCGTAATTTCGTATACTCGCATCCCTAATTCGTAAGGCTCAAGCTGAGAGAT
GGGTTCCTTTTTGACATTTTTGTGTGCGTGTGCTGGCCGGATGAA-CCTGCAGGGCTCGTGGTGTTCGGGGAGACCGCGG
ACGCCAAGGCGAAGGCGCCGTGCGCCGTGGTGTGCTTCCAGGGAGGCCACATCACCTGCGACAACTACCCCGGCCAGGAG
CTCGACGGGTGCGACTGCGAGTGCGCGCCGGCCGACGGCAAGGGCTGCGTGCTCCACCTCGACGACGGCGTGACCCACAC
CAACTGCCGCACGCCCAATATG---TAGCTGAATTGTTGGTTCGAGTTTGAGTTCAATAATGCTCTGCAAGCTTGTTGTC
GAA--TAACGAAAGTGTTCGCGTGTGTGTAGTTTGGCAGTGTAATTCAAC-TT-ACATGCTTCGAATAAAATT-------
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>chr4B_3
GGTCAGATAGCGCGGCGGACCCGTATCAATTTAGTCTAAAAACGTACGCTGATTGATAAAAGCGACAGCAAACTCGATCC
CTGCATCTCCATGCTCGAAGTCAATGAAATCGCCACGCCGGAGATTTCATTTCCCTATATAAACTGCCTAGGCTTCCATG
GCTCTGCCAACTCAAAGCACACACGAAGACGTACACGAAGGCATTATGGTTTCCGCCATGAAGCTGTCGGTCACCCTCGT
CCTCCTCCTCTCAGGTGCGTCCATCGTAAATTCTTACCCATATTCCGGTGAGAGATGGATCTTTTTAACAAATTTTATGT
GCGTGTGCTGGCCGGACGAACCTGCAGGGCTCGTGTTGTTCGGGGAGATCGCGGACGCCAAGGCCAAGGCGTCGTGCGCT
GTGGTGTGCCTCCAGGGAGGCCACATCACCTGCGACAACTACCCCGGCCAGGAGCTCGATGGGTGCGACTGCGAGTGCGC
GCCGGCCGACGACAAGGGCTGTGGTGCTCCACCTCGACGACGGTGTCACCAACACCAACTGCCGCACGCCCAATATGTAG
CTGAATTAATTGTTGGTTTGATTTAGTTCAATAAGGCTCTGCAAGTTTGTTGCCGAATAACGAAAATGTTCGCGTGTCTG
TGGTTTGGCAGTGTAATTCAACTTTACACGCTTCGAATAAAATTTCCGAGCATAATGTGTTAAGGCCCATAAAGAAAACA
AATAATGTACAAACGATAGAAAACAATGAAAATAAAGGAAGGTTTCGTGGACGCTTCGACTGGTTTTAGAACCTTGTGTG
TGTGTGTTTTACTTTCATTTTTATGTGTTTAACAGATTTTCATTGCTTTATTGGTTTTTCTAATACGTGTCTACTTTTTT
CAACAGATATTGTACATTTGTTGCGTACACGTGGAAGAATATTTTATACACATTAAACATTTGCAAATACATGATTAACA
TATTTTAAATAAATTTTTTAACAATTTTTTGAACAGTTGTTAAATATTTTTCAAATACACATTGATACATTTTTCTGAAA
GACGTGGAACATTTTTTTAAACTACTCGAACATTTTTAGAAATTTATAATTTTTTGTGTAAATATCAAGTAAATATGCGT
GAATATTTTTAGTGTCTCGTACATTTTATGAACAATATGGAAACCTTTTTAAATTTACATTAACATTTTTTTATCCTGTA
TAAACATTTTTAAAATGTCATGTGCTTTTTTCAAAAGGCTTGATCCTTTTTTTAATGTCACAAACATCTATTTTGAATGC
TATCAACATATTCTTAAAACCACTCTAACAAACTTTTGCGTTGCGTTGACATTTTTCAATTTGCTGATTTTTCAAGTTTT
TGTTACGGAATATATGTATTTAGAATATTTTTGAAAATGAAAAAAAAATGAATGAAGCAACAAAGAAAACAAACTAGCCT
GCAGGAAGCTACTCGAGACGGCCAAATAGTAGCAACGAGGGCACTCCTTGAGGCGAGACCTCCTTCGGCCACTCTAGAAG
CGAGACATTTCCCTGCGCAATTCCTATTTGACGCATTAAAAACTTGGTTCTTTCATTAACCGTAGATGACACTCACATCT
CCACATCTCCCACATATACTTTCTATACGGGCATGCCCATGTGGGTTTTTTCCCACCGTTTTTGGGAAACTTTTAGGCTG
CTACTAACACACTGGTGCTTAGATAAGATGTTAAGCGCATTAAATAGCTTAGCAATTATACTCCCCAATACATAGGTGCT
TATCTTTTTTAGCTAAACTTTCTTCCTTTAATAATTTAGCAACTAAAGTTCTCCATGCTTGTGGGCTTCTTTCATTTAAA
TGTTTTGCCTAGGTTCACGCGATTGACATTGTTTCTTCCTGGGGTCACCACACTCATCTCTTTCCTCTTAAATAATTTGC
CACATTAGATTTTTCGCCTACATGGCAGGCTTAGCACCTATGCAAGGTAGATGGGAGGGGCTTTAGAAGGTTTTAGAAGG
TTCCCACCAGTTTTCTTTAGGGGCAGCTTTTTCTCTGATTTTAAAAGGACGAGTTTACTTCAGGTTTTTCGTATTTACTT
TCCTTTCTGTTTTTTTTTACTTTTCCAATGTTTCTTTTTCATTTTTCCTTTTAGCATTTTTCTCTTTACCCATTTTTCGT
CAAATGTTTGCGCAAAAAATATTTAGTCGAAAACTTTTCTCAAATTCATGATTATTTTTTCAAAACGAAACTCTCTCTAT
TTGTAAATTTCCTCAAACTCATGATTTTTTTCTCAAATTTGTTAAGTTTTTCACATTCGTGAATTTTTCTCAAATTTGTT
AAGTTTTTTACATTCGTGAATTTTTCTCAAATTTGTGTTTTTTTAAATTCATACCTTTCTTCAAAATTGTGATATTTTTA
AAGTTGGTGAACTTTTCTAAAATCTGTGAATTATTTTCAATTCAGTGTATTTTATTATATTCTAAAATTTCAAATTTGTT
TTTTCATATTCTTAAACTTTTTTCTCAAATTTATGACTTCACTTCAAGTCTCTGAAATATGTGCGAACTTTTTTGAATTT
ATGATTTTTTGTAGATTCATGATTTTTCTAAAGTCGACTCACAAACAGTCAATGGTCAAACCGTCGAATGAAAGAGCGCG
CGGGGGGGCGGGGTGTTGGGAAGGGATAGTACCTCGCGTTTTGGTGGTCCTGCCCACACGATAAAGGCCAGTGAGCGCCG
GCTTGCTAGCCAGCGCCATAAGTAATAAAAGTACTTATTTCTTTGGAGATTGATAGTTTATTTATTGAGGATGAGTTAGC
CCTTCCCTTCTCACTTCGAGATTGATCATCTCAAGCTATCAATAGTACCTCGCGTTTTGGTGGTCCTGCCCACACGATAA
AGGCCAGTGAGCGCCGGCTTGCTAGCCAGCGCCATAAGTAATAAAAGTACTTATTTCTTCGGAGATTGATAGTTTATTTA
TTGAAGATGAGTTAGCCCTTTCCTTCTCACTTCGAGATTGATCATCTCAAGCTATCAATTGAGGATGAAAATTTAATAAT
AAATATGTTTTAAGCAATTTATTTAGTCGTCCTTTTCAAACATGGTTCATTCATATGGTAGAATTATAATATGTATTTAA
ATTAACCGGATCTTAGTGGAGGCTTGCTGGACGAGTACTTACTTTCTTTTATCCATATTGCTCATAAGCGTCAGCTCTCT
TTTCCCGTGTGACTTGGATGTGTTCCAGCGTTGGATTCATCTACAGGGGAGGTGAAGGTGTCGGGCTGCGCCCTGGGCCG
ATTTTGAAAATTTCTAAAATATAGGGTAGCCAAATTTTCCACACCATGGTGGGTCCTATTTACCTCATACTGCAGCGAAT
AGGCAGCGAATGCACAACTTACCCAAATGCTGGTTGCTACATGGGCCGGCGCATCTTTCATATTTTTTCCCGTGTGAGCT
TCTCACCGGTTTTGGGAAGGTTCTAAAACCTTCCTTGAACCGGCTTTTTTTCTCTTTTTTCTGTGCTGTTTTTTTTGGTA
TCTTCTTTTCTTTATACCTTTTTCTATTAATTCTTATTGTTTAGTGCACATTTTAAAAAATTGAGAAATTTTTTAATTTT
CGATTTTTTTGAAATACAAGAAATTGTTTTGAATTCACGAACATATTTTGAATTCGTGAACATTTTCCAGTTTCATTTTT
TTTCAAAATCCTGGACATTTTTATGCTGCAAACATTTTTGTAGATCACAAACATTTTTTTCAATTCATGATCTTGTGAAG
TTGTGA---TTTTAAAAAAATAAAAAAATCAAAAATCATGTTGAATTCGTGAATATTTTTTGAATGCACGGACTTTTTTC
AAAACCGTGAACATTTTTTCAAACCACAGACCTTCTCTGTATTTGTGTAAATTTT-CTTAAATGCATGAACATTTTTCTA
AATTGCGAACATTTTCTAAAGGTATGAACATAGTTAAATTTTGTGGTAGTATTGTAACATAA------------------
------------AAACAGGTCAAAGTATAAAAGCCTGGCTGAAAACTCGATGAGACAAAAATTACTAGTGCGCACAATAC
CGCAGTGTGCTGGCCCATTTTTGTTTCCAGCGCAGTGCGATTGGTGACTTT-------GCAGCGCAGTGCGCG-------
-------------------CGGAACAGGAGCCTTTGTGCGTCGTCCACCTCGCTGACGGGTCGACTGAGAGTGAGAGGTG
CT------GAACCTGAACCTTTTCCATTTGTACTTCTATTTGAATCAGATAGAAAAAGCATTTGCGAGGATGCTTCCCTG
GCTG-------------CTCTAATTAGTGTCTGCATGGCACTTTGGAAAATGA----TCAGTGGTGC-------------
----------------------------CGATCCCTAGTGTTTTGGTGCTACCTTTCAAGTGAGATGAAAGCGC-GCAGC
ACACACAAGAAGACGCCGCGACCTCTTCATCAAATCTA---GTGAAACTGTTGGCCGCTTCCTATCCGAAAGGGAAG---
AAATGGAGAGTTTGCACTGTTCGGGTCAGAGAGCGCGGCGAATCCGTATCAGTTTAGTCTAAGACGTACGCTGACTGACA
AAAGCGATAGCAAACTCGATCCATGCATCTCCATGCTCAAAGTCAATGAAATCGCCACGCTAGCAATTTC----------
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------------------------------------------ATTTCCCTATATAAGCTCTCTATGCATCCATGGTTGTG
CCAAGTCAAAGCACTCACAAAGA-----CAACGCTACAGGAAGG-CATTATGGTTTCCGCCATGAAGCTATCGGTCACCC
TCGTCCTCCTCCTCTCAGGTGCGTCCA---------TCGTAAATTCTTACCCATAATCCGG-----------TGAGAGAT
GGA-TCTTTTTGACAAATGTTATGTGCGTGTGCTGGCCGGATGAA-CCTGCAGGGCTCGTGGTGTTCGGGGAGACCGCGG
ACGCCAAGGCGAAGGCGCCGTGCGCCGTGGTGTGCTTCCAGGGAGGCCACATCACCTGCGACAACTACCCCGGCCAGGAG
CTCGACGGGTGCGACTGCGAGTGCGCGCCGGACGACGGCAAGGGCTACGTGCTCCACCTCGACGACGGCGTGACCCACAC
CAACTGCCGCACGCCCAATATG---TAGCTGAATTGTTGGTTCGAGTTTGAGTTCAGTAATGCTCTGCAAGCTTGTTGTC
GAA--TAACGAAAGTGTTCGCGTGTCTGTAGTTTGGCAGTGTAATTCAAC-TT-ACATGCTTCGAATAAAATTTCCGAGC
ATAATGTGTTAAGGCCCATAAA----------------------------------------------------------
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>chr4A_449
CTCGCTGAGAGGTACTGAACCTGAACGTTTTCCATTTGTATTTCTATTTGAATCAGATAGAAAAAGCATTTGCGAGGATG
CTTCCCTGGCTGCTCTAAGGCCTTGTATAATGGGAGGTGTTTAGAGAGATGCTTAGGAAAATAAACCGAATTTTTCTGAA
GTATCGGTGTCTATTTCTACAGAAGAGACGCTTAGTTAAGCGTCTATCCTGTACAAATAAGCACCGGTGGTTAAAGAAAG
CTTGGTTTATTTCTCTAAGCACCTCCTCTAAGCATCTTTCATTGTACAAGACCTAAATAGTTTCTGCATGGCACTTGGGA
AAGTGATCAGTGGTGCTGCTTAATTTGCGAGTAACTAAGACAGTCTCCTCATTTTCTTATTTTTCTTTCTATTTTTTCCT
TTTGTTTTGTGAGTTTTTTAATTCAAGAACATGTATTGAATTCATGAACATATTTTAAATGCGTGAACATGTTTTCAATT
TCAAGAACATTTTCCAAATTACCGGACATTTTTTGATATCAGGGCCATGTTTATACATCACAAGCATTTTTTGAATTCAT
CAACATTTTCAATTTTGATTTTTTTTAATTCATGAAAATAATTTCAATTCATGTTTTTCTAGAAAAAATAAACAACGTTT
TTCAAAATCATGAGTTTTTTGAATCCATGAATACTTTTTGAAACCATGGACCTTTTCTGTATTCGTGTTCATTTTTCTTA
AATACATGAATTTTTTGTAAATGGTGATTTAAAAAAATTGCAAACATTTTTAAAACTTATGAGCATATTTAAATAATTTG
GCAGTATTTTAACAAAACAACAGGTCGAGGTAAAAAAGCCAGGCCGAAAATTCCATCAGACAAAAATCGCTAGTGCGCAC
AATAGCGCACTGGGCTTGTCCATTTTAGGTTCGGACACGCGGAGGGGTGTGCGCGATTGCTGACTTTCCAGCGCACTGCA
CGGGGAACCTCG--------------------------------------------------------------------
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----------------------------------------------------------------------CTGAGAGGTG
CTGAACCAGAACCTGAACCTTTTCCATTTGAATCGGATAGA-----------AAAAAGCATTTGCGAGGATGCTTCCGCT
CCCTGGCTGCTCTAAGCCTCTAATTAGTGTCTGCGTGGCACTTCGGAAAATGACCGATCAGTGGTGCTGGTTAATTTGGG
AGTAACTAAGACAGTCTCCCGCTCGTGTCAATCCCTAGCGCTTTGCTGCCACCTTTCAACTGAGATGAA-TCGCGGCAGC
ACACGCAAGAAGACGCCGCGATCTCTTCACCAAATCAA---GTGAAACTGTTAGCCGCTTCTTATCCGAAAGTGG---AA
AAATGGAGAGCACGCACTGTTCGGGTCAGAGAGCGCGGCAGATCCGTATCAGTTTAGTCTAAGACGTACGCTGACTGATA
AAAGCCATAGCAAACTCGACCCCTCCATCTCCATGCTCGAAGTCAATGAAATCGCCACGCCAGAGATTTC----------
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------------------------------------------ATTTCCCTATATAAACTGTCTATGTTTCCATGGCTCTG
CCAACTCAAAGCACACACAAAGA-----CAACGCTACACGAAGC-CATTATGGTTTCCGCCATGAAGCTGTCGGTCACCC
TCGTC---CTCCTCTCAGGTGCGTCCA---------TCGTAAATTCTTACCCATAATCCCG-----------TGAGAGAT
GGGTTCTTTTTGACAATTTTTGTATGCGTGTGCTGGCCGGATCAACCCTGCAGGGCTCGTGGTGTTCGGGGAGATCGTGG
ACGCCAAGGCCAAGGCGCCGTGCGCCGTGGTGTGCTTCCAGGGAGGGCACATCACCTGCGACAACTACCCCGGCCAGGAG
CTCGACGGGTGCGACTGCGAGTGCGCGCCGGCCGACGGCAAGGGCTGCGTGCTCCACCTCGACGACGGCGTGACCCACAC
CAACTGCGGCACGACCAAAAAGTTCTAGCTGAATTGTTGGTTTGAATCTGAGTTCAATAAGGCTCTGCAAGCTTGGTGTC
GAA--CAACGAAAATGTTCGCGTGTCTGTGGTTTGGCAGTGTAATTCAAC-TTTACACGCTTCGAATAAAATTTCCGAGC
AGAATGTGGTAAAACTCATAAAAGTACGTACGCGCACAATAATATTAAAGATTTAATAATACCCTGATACTTCATAAGGG
CATCTTCAACGGCAACTCGCAAATTTTCT-CCGGCGTCCGTC--CACAGA---------------------TA-CGGATG
CGGGAGGACGTCATCCAACACTAGCCGCATACATTTCATATTGTTTT--C-AACTAACCGGGTG-AAATTCATGCAAACT
TGGCCGGATTTCATATAGACGTGAC-AATTTCATACAAACCAAACGAAAAAAGTTACATTTTAGACAT-ATTTT-AACAA
AAAAAGTAAAACTATAT----GCACTTACAGTCGCGC---GCTCCACTCCCACGACACGGATACAATACAC--TAAGCTA
TGTCAGGCCTCGGCGGATCCTTGTGTCTTCCTCATGTCCGGCAGCCCGC--TAACCGGACTACCGAAAGTCCCGGAGGCA
TATTCTTTCCCCCTATCTTCCCTATGTCCGGCCACGC-------------------------------------------
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>chr4D_1676
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--------------------------------------------------------------------------TAAGGG
CATCTTCAA-GGCAATCCACAAATTTCCT-CTCGTATCCGTC--CGCAGACAGG--GGACCAGTCCACGGACA-CAGATG
CGGCAGGCCGCCATCCAACCCTGGCTGTATACATTTCAAACTCTTTTT-C-AATAAACTGGATG-AAATTCATGCAAACT
CGGCCAGATTTCATATAAACATGACGGATTTCGTACAAACCGAACGAAAACGGTTACATTTTGGACAT-ATTTT-AACTA
AAAAGGTAAAACTATGT----GCACATAGAGTCGTGCAGAGCTTCACTCCCGCAACACGGATACACTACAC--TAGTTTA
CAGCTGGCCGCGGCGGATCCCTTTGTCTTCCTCATGTTTGGCAGCCCGC--TAACCGGACTGCCGGGAGCTCCGGAGGCA
TATTCTTCCCCCGTATCTTCCATACGTCTAGCTACGTCACTCATCGGAATGGCAAAGAGGGTGCTTCAGCTGGAGGG-AA
-GG-TGCTTCCGTGGAGCC-AAACGGGTGTGCCCAGG-TGGTGTGAGATAAAGACCGGACAGGCCACCAGTTGTACAAGT
CGGCAACGTGCCAGCGGTGGCCTCCATGGGATACAAGCGGCGGTGGCCTCTCATGTTCTACTTCTCCTCGATGATGGCGG
CAGGTACGGACGTGCGGGCCGCCACCTCGTCGACACCTGAGCAGCTGACTTCTTTCTCTGCGTGCATAGCAAGGCTAAGC
GCGCGTCGATGGCGGATGGCGCGGTCGCAGGCACTGAAGGCAGCGATGCCCGTGCCGTCGTGC-----------------
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>chr7D_1676
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--------------------------------------------------------------------------TAAGGG
CATTTCCAACGACAACCCATAAATTTCCT-CCCGCATCCGTC--CACGGACAAGGGGGACCAGTCCGCAGACA-CGGATG
CGGGAGGACGATATCCAACGCTAGCCGCATATATTTTGAACTC-TTTTTC-AACAAACCAGATGAAAATTCATGCAAACT
CGGCCGGATTTCATATAAACATGACGGATTTCGTAGAAACCGGACGAAAATGGTTACATTTTGGACATAGTTTC-AACTA
AAAAGGTAAAACCATGT----GCACGTACAGTCGCGTGGAGCTCCACTCCCACGACAAGGATACACTACACACTAGTATA
TGGCCGGCCGCGGCAGATCACTTTGTCTTCCCCATGCCCGAAAGCCCAC--TAATCGGACTACCGGGAGTCCCGGAGGCA
TATTCTTCCCCCGTATCTTCCCTATGTCCGGTTGCATCGGTCGTCGGAGTGGCAAAGAGGGTACTTCAGCTGGAGGGGAA
-GT-TTCTTCCGTGGAGCCCAGATGGGTGTTCCTGGGATGGTCTGAGATAAAGACCTGACAGGTCACAGGCTGTACAAGC
CAGCGATGCGTCAGTGGTGGCCTCCATGGGATACAAGCGACGGCAGTCTCCCGTGTTCTACTTCTCCTAGATGATGGCAG
CGGGCGTGAACGTGTTGGCCGTCACCTCGTCGATATCCGCGTAGCCGACTTCTTTCTTTGCGTGCATGGCACGGCTACGC
ATGAGTCGACGACGAATGGCGCGGTCGCAGACACTGGAGGCAGCGGTGCCAGTGCCACCGTGC-----------------
--------------
>chr4D_1678
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----------------------------------------------------------------------------AGGG
CATCTTCAACAGCAACCCGTAAATTTTCT-CCCGCATCCATC--CGCAAACAGGGGGGACCAGTCTACGGACA-CGGATG
CGGGAGGCCGCCATTCAACGCTAGCCACATACATTTCAAACTC-TTTTTC-AACAAACT------AAATTCATGCAAACT
CGGCCGGATTTCATATAAACATGATGGATTTCATACAAACCGGACGAAACCGGTTATATTTTGGACAT-GTTTT-AACTA
AAAAGGTAAAACTATGT----GCACGTACAGTCGCCCGGAGCTTCAGTCCCATGACACAGATACACTACAT--TAGTCTA
CGGCCGGCTGCGGCGGATCCCTTTGTCTTCCCCGTGTCCGGCAGCCCGC--TAACCGAACTGCCGGGAGCCATGGAGGCA
TATTCTTCCCCCGTATCTATCCGATGTCCGGCTACGCCGTTCATCTGAGTGGCAAAGAGGGTGCTTCAGCCGGAGGGGAA
-GG-TGCTTCCGTGAAGCCCAGATGGGTGTGCCCAGGATGGTTTGAGATAATGACTGGACAGGTCACTGGTTGTACAAGC
CGGCAACGCGCCGGTGGTGGCCTCGCAT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>chr1D_1681
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-------------------------------------------------------------------------------G
CATCTCCAACGACAACCCGCAAATTTTTTTTCCGCATTCGTC--CGCGGACAGGAG---GCAGTCCGTGGAGA-AGGATG
CGGCAGGACGTCATCTAACACTAGCCGCATATATTTCAAACTG-TTTT-C-AATAAATCAGATG-AAATTCATGCAAACT
CGGCCGGATTTCATATAAACATGACGGATTTCATACAAATCGGACGATTTTTTTTACAATTTGGACAT-ATTTT-AACTA
AAAAGGTAAAACCATAT----GCACATACAGTCACGCAGAGCTCCACTCCCATGACACAGATACACTACAC--TACTCTA
CAGCCGGCCACAACGGATCCCTTTGTCTTCCCCATGTCCGGCATCCCGC--TAACCGGACTGCCGGGAGTCCCGGAGGCA
TATGCTTCCCCCGTATCTCCCCTATGTCCGGTTACGCCACTCATCGGAGTGGCAAAGAGGGTGTTTCAGCCGAAGGGGAA
-GG-TGCTTCCGTGGAGCCCAGACGGGTGTGCCCATGATGGTCTGAGATAAAGACCAGACAGGTCATCAGCTGTACAAGC
CGGCAACGCGCCGGCGGTGGCCTCCATGGGATTCAAGCGACACCGGATTTCCGTGTTCTACCTCTCCTCGATCATAGCGG
CAGGCGCGGACGTGCGGGCCGTCAAGTCGTCGACATCCATGCAGCCGGCTTCTTTCTCTGCGTGCATGGCGCGGCTACAC
GCGCGTCGACGGCGGATGGCATGGTTGCAGGCACTGGATGAGGCGATGCTCGTGCCGCCGTGCT-C-CCGCCATGCCGGG
ATGGAGCAACTCGC
>chr2B_1682
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CATCTCCAACGGTGACCCGCAAATTTCCT-TCCACATCCGTA--TGCACAC-AGGGGAAGCATTCCGCGGGCA-CGGATG
AGGGAGACCGTCGTCCAATGCTAGCCTCATATATTGCAAACTC-ATTTTC-AAAAAACGGAATG-AAATTCATGTAAATG
TGGACGGATT---CATATAAATGATGGATTCCATAGAAACCGGACGGCAACGGTTACATTATGTATAT-ATTTT-AACTA
AAATGGTAAAACTATGT----GCATGGACTGTCGCGCGGAGCTCCACTCCCACGACATGGATACACTA-------GTCTA
CGGACGGCCATGGCAGATCCCTTTGTCTTCCCCTTGTTCGGAAGCCCGC--TCACTGGACTGTCGGGAGTCCCGGAGGCA
TATTCTTCCCATGTATCTTCCCTATGTCCGGCTATGCCGCTCATCGGAGTGGCAAAGAGGACGCTTTAGGCGGAGGGGAA
GGG-TGCTTCCACGGAGCCCAAACGAGTGTGCCCAGGATGATCTAAGCTAAAGGCCAGACATGGCACCGGCTGTACAAGC
TATTTACGCGCCGGCAGTGGCCTCCATGGGATACAAGCGGCGGCGGCCTCCCGTGTTCTACTTCTCCTTGATGATGGCAG
CGGGCGCTGATGTGCGGGCTGCCACCTTGTCGACATCCGCACAGCCGGCTTCTTTCTCTGCATACATGGCGTGGCTACAC
ACGCATCGACGACGGATGAAGCGTTCACATGTACAGGAGGCG--------------------------------------
--------------
>chr1D_1705
TTTCT---------------------------------------------------------------------------
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------------------------------CCCACATCCATCCGTGGATAG-AGGGAGATCAGTCCGCGGATA-CGGATA
AGGAAGGACGCCATCCAATGCTAGTCGCATATATTTTAAAT--TTTTT-C-AATAAACCGGATG-AAATTCATGCAAACA
TGGCCAGGTTTCATATAAACATGACGAATTTTATACAAACCGGACGAGAACGGTTACATTTTGGATAT-ATTTT-AACTA
AAACGGTAAAATTATGT----GCATGTACAGTCGTGCGGAGCTCCACTCCCATGACACGGATACACTACGC--TAGTCTA
CTGCTGACCGCGACTGACCCCTTTGTCTTCCCCATGTCCGGCAGGCCGC--TAACCGAACTGCCGGGAGCCCCAGAGGCA
TATTCTTCCCCCGCATCTTCCCTACGTACGTCTACGCCACTCATCGAAGTGGCAAAGAGGGTGCTTCAGTCAGAGTGGAA
-GG-TGCTTCCGTGAAGCCCAGACGGGTGTGCCCAAGATGGTCTGAGATAAAGACCGGACAAGTCACCGGCTGTACAGGC
CTGCGACGCGCTGGCGGTGGCCTCCATGGGGTACAAGCGGCGGCGGCCTCCCGTGTTCTACTTCTCCTCGATCGTGGCGG
TGGGCGCGGACGTGCTGGCCGCCACCTCGTCGACATCGGCGCAACCGGCTTCTTTTTTTGTGTGCATGGTGCGGCTACAC
GTGCGTCAACGGCGGATGATGTGATTGCAGGCATCGGAGGCGGTGATGCCCGTGCCGCCTTGCTCC-CCGCCGTGCCGGG
ATGGAGCAACTCGC
>chr4A_1761
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---GAGAACATCATCCAACGCTAGCCGCATACATTTCAAACTT-TTTTTCCAGCAAATTGGATG-AAATTCATGCAAACA
CGGCTGGATTTCATGTAAACATGACGGATTTCATACAAACCGGACGAGGACGGTTACATTTTGAACAT-ATTTT-AACTA
AAAAGGTAAAACTATGTATTTGCACGTACAGTCGTGCGGAGCTCCACTCTCACGACACGGATACGCTGCAC--TAGTCTA
CGGTTGGCCGCGGCGGATCACTTTGTCTTCCCCATGTCCAGCAGCTCGC--TAACCGGACCGTCC-GAGCCCTGGAGGCA
CATTC-TTCCACGTATCTTCCCTATGTCTGGCTACGCCGCTCATTGGAGTGGCAAAGAGGATGCTTCAGTCGGAGGGGAA
-GG-TGCTTCCGTGAAGCCCAGACGGGTGTGCCCAGGATGGTCTGAGATAAAGACCGGGTAGGTCACTGGCTGTACAGGC
CGGCGACGCACCGACGGTGGCCTCCATGGGATACAAGCGGCGGCGGCCTCC-----------------------------
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>chr2A_1768
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----------CCATCCAACGCTAG-CGCGTGCATTTCAAACTC-TTTTTC-AACAAACCTGATA-GAATTCATGCAAACT
CGACTGGATTTCATATAAACATGATGGATTTCATACAAACCGAGCGGAAACGTTAATATTTTGGACAT-ATTTT-AACTA
AAAAGGTAAAATTATGT----GCACG--TAGTCACGGGGAGCTCCACTCCCACGATACAGATAAACTACAC--TAGTCTA
TGACCTGTCTCGATGGATCCCTTTGTCTTTCCCATGTCCGGCAGCCCGC--TAATCGGACTATCGGCAG-CCCGGAGGCA
TATTCTTCCCACGTATCTTTCCTACGTCCGGCTACGCCGCTCATCGGGTTGACAAAGTGGGCGCTTCAGCCGGAGGGGAA
-GG-TGCTTCCGTGGAGCCCAGACGGGTGTGCCCGGGACTGTCTGAGATAATGACTGGATAGGTCACCAGCTGTACAAGC
CGCCGGCGCACCGGCGATGGCCTCCATGGGATACAAGCGGGGGCGGCCTCCCGTGTTCTACTTCTCTATGATGATGACGG
CAGGCGCGGACATGCTGGACGCCACCTCGTCGACATTCGCGTAGCCGGCTTCTTTCTTTGCATGCATGGTGTGGC-----
--------------------------------------------------------------------------------
--------------
>chr3B_1770
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------------ATCCAACGCTAGCCGCATACATTTCAAACTC-TTTTTC-AACAAACCGGATG-AAATGCATGCAAACA
CAGCCAGATTTCATATAAACATGACGGATTCGATGTAAATCGGACGAGAATGGTTACATTTTGGACAT-GTTTT-AACTA
AAAAGGTAAAGCTATGT----GCATGTATAGTAGCGTGGAGCTCCACTCCCATGACACGGAT------CAC--TAGTCTA
CAGCCGGCCGCGACGGATCCCTTTGTCTTCCCCATGTTCGGCGGCCCAC--TAACCGGACTGCCGGGAGCCCCGGAGGCA
TATTCTTCCCCTGTATCTTCCCTATGTCCGGCTATGCCGCTCATCGGAGTGGCAAAGAGGATGCTTCAGCCGGAGGGGAA
-GA-TGCTTTCGTGAAGCCCAGACGGGTGTGCCCAGGATGGTCTGAGATAAAGACAGGACAGGTCACTGGTTGTACATGC
TGGCGACGCGCCGGCGGTGGCCTCCATGGGATACAAGCGGTGGCGGCCTCCCGTGTTCTACTTCTCCTTGATGATGG---
--------------------------------------------------------------------------------
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>chr2B_1778
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--------------------CTAGTCGCATACATTTCAAACTC-TTTTTG-AATAAACGC-ATG-AAATTCATGCAAATA
CGGCTGGATGTCATACAAACATGACGGATTTCATACAGACTGGACGAGAACGGTTACATTTTGGACAT-ATTTTCAGCTA
AAAAGCTAAAACTATGT----GGACCTATGGTCGCGCAGAGCTCCACTCTCACGACAAGGATACACTACAC--TAGTCTA
TGGTTGGATGCGGCTTGTC---------TTCCCATGTCCGGCAGTCCGGAATAATCGGACTGCCGGGAGCCCCGAAGGCA
TGTTCTTCCCCCGTATCTTCCCTATGTACGGCTGCGCCGCTCATCGGAGTGACAAAGAGGGTGCTTCAGCTGGAGGGGAA
-GGGTGCTTCTGTGGAGATCAGACGGGTGCCCATGATGGA---TGAGATAAAGG--------------------ACAACC
GTCCGGGTATCCGGCGGTGGCCCTCCTAGGAACCAAGCGGCGATGGCTTCCCGTGTTCTACTTCTCCTTGATGATGGTGG
CAGGCGCGAACGTGCTGGCCGCCACCTTGTCCGTGTCCGCACGACCATCTTCTTTCCCCGCATGCATGGCGTGGCTACAC
GCGTGTCGACGGCGGATGGCGCGGTCGCAGGCACTAGATGCGACGATGCCCGTGTCGCAGTGCT-CCCCACCGTGCCAGC
GTGGAGCAACTGGC
>SNPs
------S-------------------------------------------------------------------------
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-------------------------S------------------------SSS---------------------------
--S-S-SSS-------S---SS-S--------S---------------S------------SSSSSSSS-SSSSSS----
--------------------------------------------------------------------------------
-----------------------S-----------------S-----------------------S--------------
----------------------S---------------------------------------------------------
------------S------------------S--------------------------S-------S---SS-SSS-SSS
SSSS----------------------------------------------------------------------------
-------------S----------------------------------------------S-------------------
--------------------S--S-------------------S-----S----------------------------S-
-----------------------S-S-S----------------------------------------------------
----------------S---------------------SSS---------------------------------------
--S--------S--------------------------------------------------------------------
--------------------------------------S-------------------------------SSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------S-
------S----------------SSSSS-------------S------------------------------S-------
----------------------------------------------------SS--------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S--------------------S--------------------------
-----------------------------------------------------------------------S--------
--SSS----------------------S------------------S---S---------------------------S-
----------S------------------------------------S------S-S-S------------SS-----S-
------------------------------S-------S-------S---S----------S-----------S----S-
--------------------------------------------------------------------------------
---------------------------------------------------------------------S---S--SS--
---------------------------S----------------------S----------SS-S-SSS-----------
---------S-------------S------------------S--------------------S-------S--S-S---
---------S-----------------------------------S----------------------------------
-----------------S---------------S-S---------------------------------S----------
----------------------------------------------S---------------------------------
--------------------S----------------------------------------------------------S
---------S--S---------------------------------------S---------------------------
--------------
>forward_4093
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-------------------------------------------------------------------------ACAATAC
CGCAGTGTGCTGA-------------------------------------------------------------------
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--------------
>reverse_5828
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-------------------------------------------------------------------TAGACTAGTCTAC
GGCCGGC-------------------------------------------------------------------------
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--------------
