>input_sequence_78988
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-------------------------------------------ATGGCCATTGGTGCCCAGGAGATCAAGTAC------T
TCTCGCAGGCGAAGCTTGGCCGGCGGTGGCGGCGGCCCGCGAGGGGGTTCCGGCTCAGCCCGACCCGCCTCTCCGTCCGC
CGGCTACGCGCCAGGCTGTGGACGATGCTCGGCCTGCTGGGCCGCTACTTTCGCGGCGTACGGCTCCCGCAGCTTACCAG
GGGGCTCGTTGCCAGCAGCAGCTCTCCCGCGTCAACGAGCGGCGGCGGC---AACAAGAAAGGGCAGCAGCCGGCAGTGT
CACAATCACCGGCGGCCGGTGGCAACGGCGCCAAGCCGCGGAGGCCGCCGTGCATGCGGTCAAACTCCTTCTACGCGCGC
GCCGTCGCGGACTGCCTGGACTTCATCAAGGGCAGCAACGCCGCCCCGGTCGAGGACAGCCGCGGCGGCGCTGCCAGTGC
CGTCCGGCACGGCCATGGCCAGCAGCATCACGTGCTGAAGGCCACGTGA-------------------------------
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>chr7D_1_TraesCS7D01G229200
GACTGACAAAAATGCTTTAGTAAAGACGCAGAAGGAGGGCGATTGTTTTGGTGGATTTGATCAATTTTTATGAAATTTAT
GAAGGTCCGGTTTGTCGGGTTCAACGTGACAGACGCGTCCGAGCGCGTCCGGACCTTCTATATCCGCATCAGATGTAAGC
TGAATATATATGAAGAGTGCCGGTTAAGCCGGACGAATAAGACCGGTTTGAAGAGGCCGGCTAGATCGCGATTTTATGAC
CGGTCACTGACAGGCTATCCACCCGGACGTATAAAGTGCATGAGGAGCCCAACTTGAAATGCTATGAACATAAGTTACTC
GTGTCTCGGGTTTACGACGCAACATTAGTCAACCTTCACCCAACCCAACAACCTTACCTAGTGGCGTTTAGTCCAGCTGC
TGTCGTTTTCATCTGACCACATCTTCAGCCAGTGAACTCGAAGTGGAACCACGGACATCTCAACGCACGCGCGCGCGCGC
GCACCAAAGAGGCTCATATTCCACTCCACCGCATAGCGTCCAAGGAAACCAGTTACGCGGAAACGGAGGGCGCGCGCCTT
TCACATTCTACACGATCACCTACTTCCTTTCGGAAAGAAGATTTTAAAATTATGTACGACTCTACAGCACGAACAAACCC
ATCGATCATTAGGGCGCACTGGCCTGGCCTGTACATGCTTTTCTCCTTTCTCCACCATGCATTAGTTAAGCAACAATTAA
TCAATCCCGCCATGTCTCCAAATCTGCCGCCACACTCCATTGCTGGCTCGCGCTCGTCAAAGCCCACCCACCAACCTTCC
TGCCGTCTTCCTCCCCCCGCCC---CCCTCCTCCTATATATCGCCGTTTCCGGTCGCCACTTGACCTCCAACCAACGGAG
CTGAGCTAGCTCACAGCTCACAAGTACTACGTACATGTATACGTGTTGATCGGAGCGAAGTTAGCGTATACAAGTGGCGA
GTGGTAGCTAGAGGCGAGAGAGAGGGAAGCTAGAGCAGTGATCATGGCCATTGGTGCCCAGGAGATCAAGTAC------T
TCTCGCAGGCGAAGCTTGGCCGGCGGTGGCGGCGGCCCGCGAGGGGGTTCCGGCTCAGCCCGACCCGCCTCTCCGTCCGC
CGGCTACGCGCCAGGCTGTGGACGATGCTCGGCCTGCTGGGCCGCTACTTTCGCGGCGTACGGCTCCCGCAGCTTACCAG
GGGGCTCGTTGCCAGCAGCAGCTCTCCCGCGTCAACGAGCGGCGGCGGC---AACAAGAAAGGGCAGCAGCCGGCAGTGT
CACAATCACCGGCGGCCGGTGGCAACGGCGCCAAGCCGCGGAGGCCGCCGTGCATGCGGTCAAACTCCTTCTACGCGCGC
GCCGTCGCGGACTGCCTGGACTTCATCAAGGGCAGCAACGCCGCCCCGGTCGAGGACAGCCGCGGCGGCGCTGCCAGTGC
CGTCCGGCACGGCCATGGCCAGCAGCATCACGTGCTGAAGGCCACGTGAAGATCCACCTGTTGTGTACTGTAAAAGTGTA
AATACGACGCGGCGCCGCATCGTTTCTCGCGTGGGATTTGATGGTTTTGTGAACTTGTTAGTTTCCGGCATGGTTCTTGG
TGGTCGATCTGGATGCTCCTCTTTTCTCCTTGCTTTTCTATGTTCTAGCAAGTACGTACGTACGTAGATTGTTTA-GGGT
TAGCTGGTGCAAGAAAAAGATGGTGGATTGATTGATCGGCACAACATGCACGTGCCACTTGATCTATCTTCTGTTTTCTC
TTTTTTTGAAGCTCTATCTTCTGTTTTTTTAGTTGAGTTGAATCTATCTTCTGTTGAAAGCTTTTTTTTCGAGAGTACGA
CAAAGGCGTATCATATTTTTATAGAAGTCAGAAAGTTATGTACAAGAACTTGCGTGCGATGCGAACACCCACACAAGGTA
AAACCACTCAACACCGACAAGAAAGCCTAGAGCTATTCTCTCACAAAATGATGCAAACTACCAACTCCTAGACCCGCATC
GTTCCAATCCTTGAGCTCGTTGAGGATGTGCACATGAAGCTCATCAACGGTCTTCTGCTACTCCCTCCGGTTGAACACAC
AGGCGTTCCTTTGCTTCCATTGCGACCAGTCGATCGCAATGACGAAGGTGTCGAAGCCTCTCTTGATCTTACCAGCAAAC
GGTCTTCGAGTCTGCAGCCACCAATCAAGCATTCTATCATGCACCTGAGGACTGTCAATATCCAGATTTAGGCTATGAAA
GCATTTGTGCCAGACCTGACGAGCATATACGCACTGAACGTGGATGTGGTCCACGTTATCTTCCTCCTGAAGACAAATGA
AGCACGGCGAAGGGTGGTCCTGTAAACCATGCCTAGCTTGACGATCCGAAGTCCAAACCCTATGCTACACCGCAAGCCAC
ATGTGTAACTTGCACTTCAAAGGGGCTGAGCTCTTCCAGATGCAAGAGGCAAACGGCACCCTTTCTAATCCTTGACAAAG
TCTGTCGTAG
>chr7B_283
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------------------------------------------AGGAGCCCAACTTGAAATGCTATAAACATAAGGTACTC
GTGTCTTGGGTTTACGACGCAACATTAGTCAACCTTCACCCAACCCAACAACCTTACCTAGTGGTGTTTAGTCCAGCTGC
TGTCGTTTCGATCTGACCACATCTTCAGCCAGTGAACTCGAAGTGGAATCTACAGACATTGCAA-------CGCACGCGC
GCACCAAAGAGCCCGC-------CTCCACCGCAGAGCGTCCAAGGAAACCAGTTACGCGGAAACGGAAGGCGCGCGCCTT
TCACATTCTACACGATCACCTACTTCCTTTCGGAAAGAGGATTATAAAACTCTGTCCTCTA------CACGAACAAACCC
ATCGATCATTAGGGCGCACTGGCTTGGCCTGTACATGCTTTTCTCCTTTGTCCACCACGCATTAGTTAAGCAACAATTAA
TCAATCCCGCCATGTCCCCAAATCTGCCGCCACACTCCATTGCTGGCTCGCGCTCGTCAAAGCCCACCCACCTACCTTCC
TGCCGTCTTCCTCCCCCTGCCC---CCCTCCCCCTACATATCGCCGTTTCCGGTCGCCACTTGACCTCCAACCAACGGAG
CTGAGCTAGCTCACAGCTCACGAGTACTACGTACATGTATACGTGTTGATCGGGGCGAAGTTAGCGTATACAAGTGGCGA
GCGGTACCTAGAGGCAGGGGAGAGGGAAGCTAGAGCAGTGGTCGTGGCCATGGGTGCCCAGGAGATCAAGTAC------T
TCTCGCAGGCGAAGCTTGGCCGGCGGTGGCGGCGGCCGGCGAGGGGGTTCCGGCTCAGCCCGACCCGCCTCTCCGTCCGC
CGGCTACGCGCCAGGCTGTGGACCATGCTCGGCCTGCTGGGCCGCTACTTTCGCGGCGTACGCCTGCCGCAGCTTACCAG
GGGGCTCGTCGCCAGCAGCAGCTCTCCCGCGTCAACGAGCGGCGGCGGCGGCAACAAGAAAGGGCAGCCGCCAGCAGCG-
-----TCACCGGCGGCCGGTGGCAACGTTGCCAAGCCGCGGAGGCCGCCGTGCATGCGGTCGAATTCCTTCTACGCGCGC
GCCGTTGCGGACTGCCTCGACTTTATCAAGGGCAGCAACGCCGCCCCGGTCGAGGACAACCGCGGCGCCGCTGCCGGTGC
CGTCCGGCACGGCCATGGCCAGCAGCATCACGTGCTGAAGGCCACGTGAAGCTCCACCCGTTGTGTACTGTAAAAGTGTA
AATACGACGCGGCGCCGCATCGTTTCTCGCGTGGGATTTGATGGTTTTGTGAACTTGTTAGTTTCCGGCATGGTTCTTGG
TGGTCGATCTGGATGCTCCTCTTTTCTCCTTGCTTTTCTATGTTCTAGCAA----GTACGTACGTAGATTGTTTA-GGGT
TAGCTGGTGCAAGAAAAAGATGGTGGATTGATTGATCGGCACAACATGCACGTGCCACTTGATCTATCTTCTGTTTTC--
--------------------------TTTTAGTTGAGTTGAATCTATCTTCTGTTGAAAGCT------------------
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>chr7A_393
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------------------------------------------------------------------------CCAGCTGC
TGTCGTTTTGATCTGACCACATCTTCAGCTGGTGAACTCGAAGTGGAATCTACAGACATTGCAA-------CGCACGCGC
GCACCAAAGAGCCTCCACCGCA-------CGCAGAGCGTCCAAGGAAACCAGTTACGCGGAAACGGAAGGCGCGCGCCTT
TCACATTCTACACGATCACCTACTTCCTTTCGGAAAGAAGATTTTAAAATTATGTACGACTCTACAGCACGAACAAACCC
ATCGATCATTAGGGCGCACTGGCCTGGCCTGTACATGCTTTTCTCCTTTGTCCACCATGCATTAGTTAAGCAACAATTAA
TCAATCCCGCCATGTCCCCAAATCTGGCGCCACACTCCACTGCTGGCTCGCGCTCGTCAAAGCCCCCCCACCAACCTTCC
TGCCGTCTTCCTCCCCCTGCCCGGCCCCTCCCCCTATATATCGCCGTTTCCGGTCGCCACTTGACCTCCAACCAACGGAG
CTGAGCTAGCCCCCAGCTCACAAGTACTACGTACGTGTATACGTGTTGATCGGCGCGAAGTTAGCGTATACAAGTGGCGA
GTGGTAGCTAGAGGCAAGAGAGAGGGAAGCTAGAGCAGTGGTCGTGGCCATGGGTGCCCAGGAGATCAAGTACTTGTACT
TCTCGCAGGCGAAGCTTGGCCGCCGGTGGCGGCGGCCGGTGAGGGGGTTCCGGCTCAGCCCGACCCGCCTCTCCGTCCGC
CGGCTACGCGCCAGGCTGTGGACCATGCTCGGCCTGCTGGGCCGCTACTTCCGCGGCGTGCGGCTGCCGCAGCTTACCAG
GGGGCTCGTCGCCAGCAGCAGCTCTCCCGCGTCAACGAGCGGCGGCGGC---AACAAGAAAGGGCAGCCGCCGGCAGTGT
CACAATCACAGGCGGCCGGTAGCAACGGCGCCAAGCCGCGGAGGCCGCCGTGCATGCGGTCAAACTCCTTCTACGCGCGC
GCCGTCGCGGACTGCCTCGACTTCATCAAGGGCAGCAACGCCGCCCCGGTCGAGGACAACCGCGGCGCCGCTGCCGGTGC
CGTCCGGCACGGCTATGG---GCAGCATCAGGTGGTGAAGGCCACGTGAAGATCCACCCGTTGTGTACTGTAAGAGTGTA
AATACGACGCGGCGCCTCATCGTTTCTCGCGTGGGATTTGATGGTTTTGTGAACTTGTTAGTTTCCGGCATGGTTCTTGG
TGGTCGATCTGGATG-----------TCCTTCCTTTTGTATGTTCTAGCAA----GTACGTA-GTAGATTGTTTAGGGGT
TAGCTGGTGCAAGGAAAAGATGGCGGATTGATTGACCGGCACAGCATGCACGTGCCACTTAATCTATCTTATGTTTTC--
--------------------------TTTTAGTTGAGTCGAATCTATCTTCTGTT-------------------------
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>chr7A_1913
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-----ACTCAACACCAACACCTATGCCTAAAGCTCCTCTCTCATAAAATGATGTAAGCTACCAACACCTAGGCCTGCATC
CTTCCACTCCTTGAGCTCGTTGAGGATGTGCAAATGCAACTCATCAACGTTCTTTTCCTGTTCCCTCTGGTTAAACACAC
GGGCATTCCTTTGCTTCCATAGAGACCAGGCAACCGCAATGACGAAGCTGTCAAAACCTCTCTTGATCCTCCTAACAAGA
GGTCTCCTAGCTCGAAGCCACCAGTCTAACATGCCATCATGCACCCGTGGTATGGCTACACTCAAGTCGAGGCTTTGGAT
GCATTTGTGCTAGACCTTCCATGCATAGACGCATTGGACATGGATGTGATCCACGTTATCCTCCTCTTGTAAGCACGTGA
AGCAAGCCGAAGGGTGATCCTGTAAACCATACCTAGCGCGACGATCAGATGTCCAAACCCTATGTTGCACCGTCAGCCAC
ATGTGTAACTTGCACTTCAAAGGAGCCCAGCTCTTCCAAATGCAAGAGGCAAAAGGCACCCTTTCCAAGCCCTGACACAG
CCTATCATA-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S--------S-----
------S---------------------------------------------------------S---------------
---------S--------------------------------------S-SSSSSSSSS-SS-SSSSSSSS---S-----
-----------S---SSSSS-SS----------S---------------------------------S------------
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-------------------------------------------------S------------------------------
----------------S---------------------------------------------------------------
-----------------S-------------S------------------------------------------------
-----------------------------------------------------S--------------------------
---------------S------------------------S--S-------S----------------------------
-------------------------------------S------------------------------------------
-----------------------S-----------------------------------------S--------------
---------S----------------------------------------------------------S-----------
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-----------------S----------------------------------------S--------S-------S----
----------------------------------------------------------S---------------------
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---------------------------------------------------SSSS-------------------------
------------------------------------------------------------------------------SS
SSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS----------S---SSS-S-----S----SS-------S---------S--S--------S-----S--S-----
S-----S-------------------------S---S-S----------S----S-S--SS------S----S-------
S---S---------------S-S------S-S-S-------------S----S--S------------S-S-S-S---SS
-----S-S--SSS-S--------S--S-S---S-S----------S-S--SS--S-S-S-SS--SS-SS-----S--S-S
----------S------SS-SS-----S-----S--S--S--------S-----------S-----S--S-SS--SS---
----S-S---------S-------------S------SS-------S--S--------------S-S-----SS------
-----------------------S--SS----------S--------------S-----------S--S--S-----S--
S--S--S--S
>forward_108
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--------GGTTTGTCGGGTTCAACGTG----------------------------------------------------
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>reverse_1830
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---------------------------------------------------------------------CGAGAGTACGA
CAAAGGCGT-----------------------------------------------------------------------
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