>input_sequence_78894
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------------------------------------------------------------------------------AT
GGCTCTGGGAAGAGGCAGTGCGAGGAACGGTGCCGCCGGCC------------TGCTGCTGCTCGGCCTGCTCGTGATGA
GCGCCGAGGCGGCCAAGTACACGGTGGGCGACTACGGGGGCTGGAAGTTCAACGTCGCCGGGTGGGCCAAGGGGAGGACC
TTCCGCGCCGGCGACGTGCTCGGTGAGCTGATCTCCGCTACT------------GCTCGCTAGCTTCTG---------TA
TGCGTTTGTTCGTGACACGACGCGCTTGTGTGTGTGTG----------------------------TGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGCAGAGTTCAAGTACAACGGGGCGGTGCACGACGTGGCGGCCGTGGACGCGGCGGCGTACCAGAG
CTGCGTGGTGCCCAAGGGCAAGAGGGCGATGCGCAGCGGGCACGACAAGGTGAGGCTGGTCAAGGGGATGCACTACTTCG
TCTGCACCGTGCGCGGGCACTGCAAGGCCAACATGAAGATCGCCGTCAGGGTCATCTAG---------------------
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>chr6A_1_TraesCS6A01G292500
GGCGGCACGCAGCTTTTCCCCGCCGACGGCAGCATCGCCCGTCATGCTTTGCCTTGCAGGAGCGGTTGGTGCTTGCGGCA
AGATGTGCACGCCATGGTTGGAAGCAACGATGGTGAGCCATTGTATTGTATCGAGTCCCACTCATCCCTGTCACAGCCCG
TGAAAAAATGAGAGAGAGAGGGGGGATGGGGGACGAACGAAGAAGACGAGAAAGGGAGAGGATAAGGCTGGGATGGAAAG
CGGTGAGCCGGGCCCGCATGCTACGCGTGTAGTGGATAGGCGACGCACACGCGTGAGATGAGCGCCGCACGATCGGCTTT
GATCGCACGGCTAGCGACACGGTTTACGCGAGGCAAACATCAGTCGGTTTCAAACAAACGATTTCCTTGTCTAATTTATC
AGTAAAGTCGGATTGTTTACCCAGAAACCCAAAAAAGGTTATACTAAAAAAATTAAGTTTTTTTACTGGGTAGCAATAAT
AACACTTCGCGTCCGCGACA--------------ATACACTTCCGAGATCGATCCAACATACAATGAAACTTCCCCTTCC
CTGCCCTAAAAAAAAC---------ATGCAATGAAACTTCTTTCCAGCGTCAAAGATAGGCACCGCCACCTTTTATTCTC
AGTTTCAGATTTGGACGGGAAGGAAGGCCTGCACGCAGGGCGCACGCCGAAATCATCAGACATGGCTGCTATTCTACTCC
TGGGAGAGCTCGTCTTTTTGTTGCGTTCCTCCGCTCCCCGCCACC-----------GACTAGCTCGGTAGCCAAAGCAAA
AGCACCGCAACCTGCCAACGCCGGAGCGGGAGCGCCGGCCGGATTCACGCGCACCAACTCCACCCGCGCGCTCTCCTCAA
CACTACTGCCA----CTAAATACTCAATGCCTAGCTAGCTCGGCCGCGGAAGCACGCGCTATAAGAGGCCACGCCGGTGC
GTGGCAACCGGCAGCTCCTTCGATCTTGTCAGCCAGTTCGAACTTGAGTGTCACTGTCACTAGTAGTGTAGTGCGTCGAT
GGCTCTGGGAAGAGGCAGTGCGAGGAACGGTGCCGCCGGCC------------TGCTGCTGCTCGGCCTGCTCGTGATGA
GCGCCGAGGCGGCCAAGTACACGGTGGGCGACTACGGGGGCTGGAAGTTCAACGTCGCCGGGTGGGCCAAGGGGAGGACC
TTCCGCGCCGGCGACGTGCTCGGTGAGCTGATCTCCGCTACT------------GCTCGCTAGCTTCTG---------TA
TGCGTTTGTTCGTGACACGACGCGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG------------
----------------CAGAGTTCAAGTACAACGGGGCGGTGCACGACGTGGCGGCCGTGGACGCGGCGGCGTACCAGAG
CTGCGTGGTGCCCAAGGGCAAGAGGGCGATGCGCAGCGGGCACGACAAGGTGAGGCTGGTCAAGGGGATGCACTACTTCG
TCTGCACCGTGCGCGGGCACTGCAAGGCCAACATGAAGATCGCCGTCAGGGTCATCTAGAGTGTTTA----------TAG
CTACCTGTTTTGTCAACTGCATTCAGATCAGGTCGATCCAAAGCTTCCGACTACAGCTTTTTAGTTTGCTTAATGCTTGA
ACCAACTGCTAGTTTGCTTCCCAGTTTTTATCCGTGCACTCTTGTTCTAGGTGCGGCAATCGCGAGTTGTAATTCCTGTT
AATTTGAATATGGGTCTGAAGGCTTACTAAAAAACTGGATGGACTAGCGCTTCTCCATCCTTTGTTGACACAGGAAAAAC
CTAACCAG-------------------------------------------------CAAATCGGGCACTCACGGGA---
----GACACAAGAGGTTCCATTTATTATGAAACTTGTACTGGTGCCATGATATATCGATCGGATGTTTGCATACCCTCTC
TCCTACTTAAAAAATACGTACTAAGGTTTCATCATAAAGATCCACAAACCTTGCCATGGTAAATTTCACAGCTAGTAGTA
CCCACTATGCACCGTCGTACTTCTAAGC---ACTTGAAGATCACATTGCTGTCATGTCAGAACAAACTTCTTTTGGCCCA
GGGGCGCGATAATCACTCGTCCTTGTCGTCTTTCTTCGGCTTACGGTATGTTTCCTCAATGTGCTTTGCCAGGAAAACAT
ACGTGTTGAACAGCTTCTTGACATTTGGAACGTTGTAGTTCTGAGCTACATAGACACCACATCCCACTCCCACCAAAAAC
TTGAGGCCACCACCAAAAAGCCCCATTGCGAGAAAACCTGGAGATGATGATATAA-GGTTATGAACATGCATTTCGACAG
AGGATGTAAAAAAA-CACGGGGAAACAAAAAAATGATACAAAATG-----------------------------------
---------------------------TCGCAAAAGAAAGTAACAGAAGCTACGTTTACTGGCACTGAGTAATAACGATT
CATTTCTTCAGATTCCAACCTCATATGTTTGGTC-----ATTATAGATATAATTTCCAAAGTCAGGATGTTGCTGCTCAG
TTGCTTCATTGATTGTGAAGTCCAGTAGGACGGTACCACGGCAAGAATGAAAGACACTGCCAGGAGAGGTGGCTGCC
>chr6B_403
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--TAAAGTCGGATTGTTTACCCAGAAACCAAAAAAAGGTTGTACTAAAAAAAGAT--TTTTTTTACTGTGTAGCAATAAT
AACACTTCGTGTCCACGACAAGTCTACTGGCGAGATGCACTTCCCAGATCGATCCAACATGCAATGAAACTCCCCCTTCC
ATCCCCTCAAAAAAAGAAAAGAAAAATGCAATGAAACTTCTTTCCAGCGTCAAAGATAGGCACCGCCACCTTTGATTTTC
AGTTTCAGATTTGGATGGGAAGGCCTG-CTGCACACAGGGCGCACGACGAAATCATCAGACATGGCTGCTATTTTACTCC
TGCAAGAGCTCGTCTTTTTGTTGCGTTCCTCCGCTCCCCGCCACCGACTAGCTCTGGACTAGCTCGGTAGCCGAAGCAAA
AGCACCGCAACCTGCCAACGCCGGAGCGGGAACGCCGGCCGGATTCACGCGCACCAACTCCACCCGCGCGCTCTCCTCAA
CACTACTGCCAGCCACTAAATACTCGGTGCCTAGCTAGCTCGACCGCGGAAGCACGCGCTATAAGAGGCCACGCCGGTGC
GTGGCAACCGGCAGCTCCTTCGATCTTGTCAGCCAGTTGGAACTTGAGTGTCACTGTCACTAGTAGTGCGC-----CGAT
GGCTCTGGGAAGAGGCAGTGCGAGGAACGGTGCCGCCGGCCTCGGCGCGGCGGTGCTGATGCTCGGCCTGCTTGTGATGA
GCGCCGAGGCGGCCAAGTACACGGTCGGCGACTATGGGGGCTGGAAGTTCAACGTCGCCGGTTGGGCCAAGGGCAGGACC
TTCCGCGCCGGCGACGTGCTCGGTGAGTTGATGTCTGCTTCATTGTTAGCCGCCGCTCGCTAGTTTCTAACAGC-----A
TACGTTTGTTCGTGACACGATGCGCTTGTGAGTGTGTG----------------------------TG------------
----------------CAGAGTTCAAGTATAACGGGGCGGTGCACGACGTTGCGGCCGTGGACGCGGCGGCGTACCAGAG
CTGCGTGGTGCCCAAGGGCAAAAGGGCGCTGCGCAGCGGGCACGACAAGGTGAGGCTGGTCAAGGGGATGCACTACTTCA
TCTGCACCGTGCGCGGACACTGCAAGGCCAACATGAAGATCGCCGTCAAGGTCATCTAGTCTAGAGACTAGAGTGGCTAG
CTACTTGTTTTCAACTA-----------CAGATCCAGCCAAAGCTTTGGACTAAAGCTTTTTAGTTTGCTTAATGCTTAA
ACCAACTGTTGGTTTGCTTCCCCGTTGATTTGCCTTG-CTCTTGTTCTAGATGCGGCAATCGCGAGTTATAATTCCTGTT
AATTTGAATATGGGTCTGAAGGTTTGCTAAAAAACTGGATGGACTAGCGCTTTCC--TCCTTTGTTGACACAGGAAAAAC
CTAACCAGTAAATCTAGAAAAAAGGGG---AAAACCTAACCAGTAAGGAAGAGATAGCAAATCGGGCACTCACGGGAAGA
TTACG--ACAAGAGGTTCCATTTATTATGAAACTTGTACTAGTGCCATAATATATGGATCGGATGTTTGCATACCTTCTC
TCCTACTTAAAAAATA----CTAAGGTTTCATCATAAAGATCCACAAACCTTGTCATGATAAATTTCATAG------GTA
CCCACTATGCACCGTCGTAGTTCTAAGC---TCTTGAAGATCACGTTTCTGTCATGTCAGAGTACACTTCTTTTCG-CCA
GGGGTGCGATAATCACTCGTCTTTGTCGTCTTTCTTCGGCTTACGGTATGTTTCCTCAATGTGCTTTGCCAGGAAAACAT
ACGTGTTGAACAGCTTCTTGACATTTGGAACGTTGTAGTTCTGAGCTACATAGACACCGCACCCCACTCCCACCAGAAAC
TTGAAGCTACCACCGAAAAGCCCCATTGCGAGAAAACCTGGAGACGATGATATAAGGGTTATGTGCATGCATTTCGACAC
AGGATGTAAAAAAAACATGGTAAAT-AAGAAGATGACACAAAA-------------------------------------
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>chr6D_447
AA------------------------------------------------------------------------------
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---------------------------------------------AAAATAAGAT--TTTTTTTACTGGGTAGCAATAAT
AACACTTCGCGTCCACGACAAGTCTACTGGCAAGATGCACTTCCGAGATCGATCCAACATGCAATGAAACTTGCCATTCC
CTCCCCTAAA-----------AAAAATGCAATGAAACTTCTTTCCAGCGCCAAAGATAGGCACCGCCACCTTTGATTCTC
AGTTTCATATTTGGCTGGGAAGGCCTG-CTGCACACAGGGCGCACGCCGAAATCATCAGACATGGCTGCTATTTTACTCC
TGGGAGAGCTCGTCTTTTTGTTGCGTTCCTCCGCTCCCCGCCACC-----------GACTAGCTCGGTAGCCAAAGCAAA
AGCACCGCAACCTGCCAACGCCGGAGCGGGAGCGGCGGCCGGATTCACGCGCACCAACTCCACCTGCGCGCGCTCCTCAA
CACTACTGCCA----CTAAATACTCAATGCCTAGCTAGCTCGGCCGCGCAAGCACGCGCTATAAGAGGCCACGCCGGTGC
GCGGCAACCGGCAGCTCGTTCGATCTTGCCTGCGACTTCGAAGCTGACTGTCACCGTCACTAGTAGTGTATTGCGTCGAT
GGCTCTGGGAAGAGGCAGTGCGAGGAACAGCGCCGCGGTCCTCGGCGCGGCGGCGCTGCTGCTCGGCTTGCTCGCGATGA
GCGCCGAGGCGGCCAAGTACACGGTCGGCGACTACGGGGGCTGGAAGTTCAACGTCGCCGGGTGGGCCAAGGGCAGGACC
TTCCGCGCCGGCGACGTGCTCGGTGAGTTGATGTCTGCTTCATTGTTAGCCGCCGCTCGCTAGTTTGTAGGAGTAATATA
TGCGTTCGTTCGTGACACGATGCGCTTGTGAGTGTGTG----------------------------TG------------
----------------CAGAGTTCAAGTACAACGGGGCGGTGCACGACGTGGCGGCCGTGGGCGCGGCGGCGTACCAGAG
CTGTGTGGTGCCCAAGGGCAAAAGGGCGCTGCGCAGCGGGCACGACAAGGTGAGGCTGGTCAAGGGGATGCACTACTTCG
TCTGCACCGTGCGCGGGCACTGCAAGGCCAACATGAAGATCGCTGTCAGGGTCATCTAGGGACCAGA----AGTGGCTAG
TGACTTGTTACCA------CATTCAGATCAGATCGATCCAAAGCTTTCGACTAAAGCCTTTTAGTTTGCTTAATGCTTAA
ACCAACTGTTAGTTTGCTTCCCATTG-----CCGTGCACTCTTGTTCTAGATGCAGCAACCGCGAGTTACAATTCCTGTT
AATTTGAATATGGGTCTAAAGCTTTCTGAAAAC----GATGGACTAGCGCTTTTCCATCCTTTGTTTACACAGGAAAAAC
CTAACCAGTAAATCTCAAAAAATAAAGGAAAAAACCTAACCAGTAAGGAAGAGATAGCAAATCGGGCACTCAGGGGAAGA
TGACGACACAAGAGGTTCCATTTATAGTGAAACTCGTACTAGTGCCATAATATATCGATCGGATATTTGCATACCTTCTC
TCCTACTTCAAAAATA----CTAAGGTTTCGTCATAGAGATCCACAAACCTTGCCACGATAAATTTCACAG------CTA
CCCACTATGCATCGTCATAGTTATAATAAGTTCTTGAAGATCACGTTTCTGTCATGTCAGAGTACACTTCTCTTCG-CCA
GGGGTGCGATAATCACTCGTCTTTGTCGTCTTTCTTCGGCTTACGGTATGTTTCCTCAATGTGCTTTGCCAGGAAAACAT
ACGTGTTGAACAGCTTCTTGACATTTGGAACGTTGTAGTTCTGAGCTACATAGACACCACATCCCACTCCCACCAAAAAC
TTGAAGCTACCACCGAAAAGCCCCATCGCGAGAAAACCTGGAGACGATGATATAAGG-TTATGTACATGCATCTCGACAG
AGGATGTAAAAAAA-CATGGGAAAA-CAAAAAATGATACAAAATGATTGCTGTCATGTAGCAGAAACACACTACCCTTTC
CAAACATGAAGCCAAATGACACATATTTCGCAGAAGAAAGTAACAGAAGCTACGTTTACTGGCACTGTGTAATAACGATT
CATTTCTTCAGATTCCAACCTCATACGTTTGGTCATTATATTATAGATATAATTCCCAAAGTCAGGATGTTGCCGCTCAG
TTGCTTCATTGATTGTGTAGTCCAGTAGGATGCTACAACAGCAAGAATAAAAGACACTGGCAGGAGAGGTGGCTGCC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS---------------------------S----------S-----------SSSSS-----------------------
--------------S---------------------S-----------------------S-------------------
--S------------S---------------------------------------------------------S------
---------------S-------SSS-S------S--------------------------------------S------
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----------------------------------------------------------------------S---------
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-------------------------S-----------------------------------------------S------
---------------------------S----S--S---S-S---------------------S----S-----------
--------------------S---------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
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---------------------S------S---------------------------------------------------
-----------------------------------------------------------S--SSSS--------------
----S------SSSSSSSS------------S--------------S------S------------------------S-
--------S-----------------SS-S--------------------S-----------------S-----------
----------------------S--S--------------------------S---------------------------
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----------------------------------------S-------S--------------------------S----
----------------SSSS--------------------------------------S------------SSSSSS---
-------------------S-----------S------------S--S-------------SS-S---------S-S---
----S----------------S----------------------------------------------------------
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----S--S------S-----------------------------S------------------S----------------
-----------------S---S---S------------------------------------------------------
--------------------------------S----------------------------------S------------
-------------------------S----------------------------S------------------S------
-----------------S------------S-S---S--S--------S----------S-----------------
>forward_364
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------------------------TACGCGAGGCAAACATCAGT------------------------------------
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>reverse_1335
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------------------------------------------------------TGTGTGTGTGTGTGCAGAGT------
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>forward_668
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--------ATTTGGACGGGAAGGAAGGC----------------------------------------------------
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>reverse_2671
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------------------------------CGGTACCACGGCAAGAATGA---------------------------
