>input_sequence_78817
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-----ATGGCCGGTGCGAGTGGTTTAGTTGCTTTTCTTCTTCTTTCATCCATGATAGTCTCCGCAGGTAGAGTTACATTC
ACTTGTTCTACCGGCCTCTTCGATGCAAGCTTTATGATGATGATGGAATTTCAAGAATACTTTTGTTTGGTTTGCATGAT
ATATTCACTAAATGTTGTCATGTATTTTATC-----TAGAGAGACGCCGATGACGTTTACTTTCTAAGCTTTTTATATGT
GAAACCTTATTTGTTAAAATTTGAAGGTACTCCGATAAAATTTTCTTCATATATGCGCCTTCACTTTTGCTTGGGCAGCA
CCTGCAACATTAATACCAAGATGTGGCGAATATTTTCATTCATGGGGTGAGCACGACTCCTGCATTCCTCCTGAAAATGA
TGAGTGCGACTCATGGTGCAAGAATCGATGTGCCAGAGGGGTATGCGAGCTCAAGCGAGGAAAACATTATTGCCATTGTT
ACAAGAACTGA---------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr2D_1_TraesCS2D01G009500
GAACAACAAACGTCGTCGATGAAGAGAAGCCTAGATCAGAAGGTTCCAATCCGTAGACACACGAACGCAAATGAATGAAG
ACCAAATCCATGTGGATCCACCAAACACAAACACCGACTGAATTCCATGAGATCCATCGGAGACACACCTC---ACGCCC
TCCGACGATGTCTGACGCACCACCGAGACAGAGGCTAGAAAAGGAAAACCTTATTCTATCTTCAGAGAGGCACCGTCGCC
TCACCTTCCTGAGCAGGATAGAAACCTTAAGCGAACTCAAAAGAACGCCTAAAAATTAAGTAGGTGCCCTCTTACTGGCA
AGGGCCAGGATCTACCGCACCTCCATAGCTCTAAGGCCACAGGAGACGAGGCAGATCGGCGGCGCTGGTAATGGGAGACG
GGAAAACCCTAGACGCGTGGAAGTTGTTCGTGTGGTGAGGAGAAAAACATGTTCAACTTTCTTATTAAGAAGTCTTCTTT
ATACTACATGACTAACATATTTTGGTCTTGTTGAACCT-ATACTAGATATCAAGGGTGGATTTACCGTCTCTACAGCGTG
CAGTGCCGCCAGCCACCACAGGGGCGAGTAGGGTAACTTCCTCACCCGGTGGCTAGACA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CGTATCAACCTCAAGCCTAGTCGATGTCC
ATCCCATGGCAAAAAATATATATTTTGGGTCTACCACTGCCAGCCCAGGCTTGCCGGAAGTGTCACGTTTCATGTTCAAT
GCTGAGCGTCCGATATGTTTAGCATG------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TAATAATTTGACACCCAATATAAACGCAAC-CATAATTGGC
GCATATTAACATA-------------------------------------------------------------------
------------------------------------------------TAATTGATATTGTGCCTGATAATAATGTGCAT
TGCAAAATTAGCGCCTCTAGCAAATAATTTATTCTAAACATAGCAGGGATCCTCGGGCTATAAATATGAGTAGGTTAAGT
ACGCACCCATGCACTAAAAATATATCAAAAGTTCAAACTTGAACACCACGCACACTTGAAGAGATTGTTATCCCACGAGA
ACAATATGGCCGGTGCGAGTGGTTTAGTTGCTTTTCTTCTTCTTTCATCCATGATAGTCTCCGCAGGTAGAGTTACATTC
ACTTGTTCTACCGGCCTCTTCGATGCAAGCTTTATGATGATGATGGAATTTCAAGAATACTTTTGTTTGGTTTGCATGAT
ATATTCACTAAATGTTGTCATGTATTTTATC-----TAGAGAGACGCCGATGACGTTTACTTTCTAAGCTTTTTATATGT
GAAACCTTATTTGTTAAAATTTGAAGGTACTCCGATAAAATTTTCTTCATATATGCGCCTTCACTTTTGCTTGGGCAGCA
CCTGCAACATTAATACCAAGATGTGGCGAATATTTTCATTCATGGGGTGAGCACGACTCCTGCATTCCTCCTGAAAATGA
TGAGTGCGACTCATGGTGCAAGAATCGATGTGCCAGAGGGGTATGCGAGCTCAAGCGAGGAAAACATTATTGCCATTGTT
ACAAGAACTGAATTTTTTTACTGCTTAATAATTTTTTGGAAGCTATTTGTAATAAGAAGTATAAGTTACTTCAGATAATT
AAATCTCTACTCCTAAAAAGGACCTGGTAGCTTCACCTCCATGGTTTTATTTCATCT-------CACCATCACCTCTTCA
CGTTGGTTTTTTCACCTTCCCAAT-AAAAACTTTTCTATCCTTTCTAAACGTTCCTAACCAACCACGTTACAAATTGGCA
GGAACCGATAGCACGTTTACGAAACAGTGAAATCCAATTTGTTGGCAATCAATTCCAAATACTAACTTCCCTATTGCATC
GATTCCTGCTTTTCCTAACAACCAAATCTCTACTATTAAAGGGCAATCACTACAAGAAATATGTCAACTAGTGACCTTCT
GTCAGTGACCCTGGAAGAATTGGTCATAGATCTATGACCATTTGAGACCAATTGGTCAAAAGCTGCTCGGGGGGCTCCAA
ACCCTCAACTATATCGACCATTTTGGCCATAAAGGTCGTAATTTCCTTACACGAAATAGTCATAAAGCAGACATCACTGA
TCCGCTGCCTTATTTCTAGCTGATCACGACCAATATAGATGGTCATAACCTTGTAAGTTGTGGTGGATTGCTATGACTAG
GCGCCACCTCATCAGTTTTGCCTATGTGTCATGTCCATGTGTCAATTTTTGCCCTAGGTTGTGAAGCAAC-------TCT
GTTAGTCCCAAAATTCTGAA---------AAAATACTCATAAATTCTTTTGATCATATCTTCGTCAAATATGTCAAAA--
ACCTTCCTCGCCTAGTTAAAATATAATTCAAGAATATTCATTTTCCTATTCTGTTCAGAATAGCACTTTGTGAAGGAAGT
GCTATTTTTATATTCTTGATTGCCCTCAAAATTTTTGGGCACTCTTTCCTATCCAAATCATTGCCTCATGACAAAATC-A
GCTCCATTTGCCTAGT-AATGTTCCTCGGCAAATTTCCAAAG-TTTTTTGTTCAGCTAGAAGCTTTGTGAAGGTAGTACT
>chr2B_3
--ACAGCAACCGTCGCCGATGAATAGAAGCGTAGATCGGAAGGTTCCAATCCGTAGACACACGAAGGCAGACGAATGAAG
ACTGAATCCATGCGGATCCACGAAAGACAAACACCGACCAAATCCTATGAGATCCGTGGGAGGCACACCTCCACACGCCC
TCTGACAATGCGTGACGCATCGACGGGATGGAGTCTAGACGGGGAGAACCTTATTCTATCTTCAAGGAGGCATCGTCGCT
TTGCCTTCCTAAGTAGGACATAAACCTTAAACAGACTC-AAAGAACACCTAAAAATGAAGCAGGTGCCCTCCCATTGGCA
AGTGCTGGGATCCACCGCGTCTGCATGGCCCTAAGGCCACAGGAGATGAGGTAGATCGACGGCGCCCCCTATGAGAAACG
AGAAAACCCTAGACGTGTGGGAGTCGTT--TGTGGGGAGGAGAAAAACATGTTCAACTTTCTTATG--GAAGTCTTCTTT
ATAC---ATGACTAATATATTTTGGTCTTGTTGAACCACATACTGGATATCACTAGCAAAAAGGGTCCATGAATTGCAAC
ATGAGAAATTTTTTATAATCTCCAATGGGCATGATCACATTTTGTTGCATCCCCGAGATACACTATCACTCTCTCGTGAA
ATCATGAACATTTTTTAAATTCGTGAACATTTTTCAAATTCATGAACACTTTTACATATTCTCAAACATTTTCTAAAATC
AAAAACATTTTTTGAATTCATGAACATTTTATACTATTAGCAAACATTTTTTTAACAATTTTCTTGAATCGGCGAACATT
TCTTGAATGGACAAACATTGTTTTGGAAATTGGTGGAACAACTTTTGAAATTCAGGAATATTTTTTTAATTTAACAAACA
TTTTTTTAAATGCATGATCATTTTTTGAATCAGCGAATATTTCATGAATGAATAAACTATCTAAGTCACAATAAGTTTTC
GAATTTTTAGGATATTTTTTCATTCATGATTTTTTTTTGAATTGGCAAAATTTTGTTCATTTTCATTAATATTTTTAATA
CATAAACTTTTTAAATTAATCATGAACATTTTTTGATTTCGTGAACATTTGTTTTGAAAATTCTATTTTTAATTTTTTCC
AAAACTTTTTCGAAATCTCAAATTATTTAAATTATATAAAAAATGAAAAGTAAAAGGAAAAAATAAAAACAAATTTAGAA
AAAGGGGTTCAGACATGGGCCCATCCAAACGGGTGCGCTCCGTCTTCTCCCAGCGCGCAAAGCGCAATATAGGAGGTCCC
TAGTACATGGGCTGGCCCAGGCAGGGGATTCCCCTGTGTGGTGGACGGACGCGTATCAACCTCAAGCCTCGTCAATGTCC
ATCCCATGGCAGAAAA---ATATTTTTGGTCCGCCACTGCCAGCCCAAGCTTGCCGGAAGTGCCACGTTTCATGTTCAAT
GTTGAGCGTCCGATATGTTTAACACGTGAGGCCTTGTACAATGGGAGATGCTTAGGGGAGGTGCTTAGAGAAATAAAACA
AGCTTTTCTTAAGCATCAGTGCTTAAGCGTCTCTTCTATAGAAATAGGCACCGGTGCTTCAGAAAAATCCGGTTTATTTT
TCTAAGCATCTCTCTAAGCACCTTCCATTGTACAAGGCCTAATAATATCACACCTGTCGGCCCCAACCGACATAATTGGC
GCATATTAACATACTTCCTCCGTTCGAAAATACTTGTCCTAGAAATGGATTAGACTTATTTTAGTTATAGATACTTAAAT
TTTATTCATTTGTAGTACAAGTATTTCCGGACAGAGGAAGTATATGAGTAATTGATATCATACCTGATCACGACGTGCAT
TGCAAAAATGGCGCCTCTAGCAATTAATTGATTCTAAAAATAGCAGGGGTCCTGGTT-TATAAATATGAGCAGGTTA-GT
ACGCACCCACGCACTAAAAATATATCAAAAATTCAAACTTGAACACCTGACTACCAAGTTGCCTACA----------AGA
ACAATATGGCCGGTGCCCGCGGTTTAGTTACATTTCTTATTATTTCATCCATGATAGTCTCGGCAGGTAGAGTTACATTC
ACTTGTTTTACAAATGTTGATG-----------ATGATGATGATGGAATTTCACGAATACTTTTGTTTGGTTTGCATGAT
ATATTCACTAAATGTTGTCATATATTTTTATCTAGATAGAGAGACATCGGCCATGTTTACTTTTGAAGCATTGTATCGGT
GTAACCTAATTTGTTAAGATTCAAAGCCAATTATTTGGTATT----------------------TTTTGCTTGGGCAGCA
CCTGCAACGTTAATACCAAGATGTGGCAAAAAATTTCATTCCTGGGGTGAGCACGACTCCTGCATTCCTCCTAAAAATGA
CGAGTGCGACTCATGGTGCAAAAATCGATGTGCCAGAGGGGCATGCGAGCTCAAGCGAGGAAAACATTATTGCCATTGTT
ACAAGAACTGAAATTTTGTCACTGCTTATAATTTTTTGGAAGCTATTTGTAATAAGAAGTATAAGTTACTCTAGATAATG
AAATCTCTACTCTTAAAGGGGACTTGGTAGCTTCGCCTCCATGGTTTTATTCCGTCTCACTTCTCACCATCACCTCTTCA
AATTGGTTTTTTCACCCTCCCAATAAAAAACTTTTCTAACCTTTCCAAACTTTCCTATAACACA----------------
---------------TTTATGAAACAATGAGATCCAGTTTCGTGGCAATCAATTTCAAATCCTAACTTCCCTAACGCATC
GATCCCTGTTTTTCTGAACAACCAAATCTCTACTATTAAAGGGCCATC--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
>chr2A_1820
AAAGG---------------------------------------------------------------------------
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-------------------------------------------CAATCACTACAAGAAATATGTCAACTAGTGACCTTCT
GTCAGTGACCCTGGAAGAATTGGTCATAGATCTATGACCATTTGAGACCAATTGGTCAAAAGCTGCTTAGGGGGCTCCAA
ACCCTAAACCATTGCGACCATTTTGGTCAGAAAGGTCATAATTTCCTTACACAAAATGGTCATAAAGCAGACAGCACTAG
TCCGCTGCCTTATTTCTAGCTGATCATGACCAATATAGATGGTCATAACCTTGTAAATTGTGGTGGATTGGTATGACTTG
GCGCCACCTCATCAGTTTTTCCTATGTGTCATGTCCATGTGTCAATTTTTGCCCTAGGTTGTGAAGCAACCTATATTTAT
GTCATTCCCAAAATTCCCAA---------AAAAATCTCATAAATTCTTTGAGTCATATCTTCATCAAATATGTAAAAA--
TCCTTCCTTTCCTAGTTCAAAACTAATTCAACAATATTCATTTTTCTATTCTGTTCACAACAGTACTTTATGAAGGAAGT
GCTATTTATATATTCTTGATTGCCCTTGGAATTTTTGGGCACTCTTTCCTATCCAAATCATTACCGCATGACAAAATTCA
GCTCCATTTGCCTAGCAAATCTTCCTCGGCAAATTTCCAAAG-TTTTT-GTCCACCTAGAAGCATTGTGAAGGAAGTAC-
>chr1D_1827
--------------------------------------------------------------------------------
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--------------------------------------------AATCACTACAAGAAATATGTCAACTAGTGACCTTCT
CTCAGTGACCCTGGAAGAATTGGTCATAGATCTACGACCATTTGAGACCAATTGGTCAAAAGCTGCTCGGGGGGCTCCAA
ACCCTCAACTATATCGACCATTTTGGCCATAAAGGTCATAATTTCCTTACACGAAATGGTCATAAAGAAGACAACACTGA
TCCGCTGCCTTATTTCTAGCTGATCACGACCAATATAGATGGTCATAACCTTGTAAGTTGTGGTGGATTTCTATGACTAG
GTGTCACCTCATCAGTTTTGCCTATGTGTCATGTCCATGTGTCAATTTTTGCCCTAGGTTATGATGCAACCGATATTTCT
GTTAGTCCCAAAA-TCCAAA---------AAAAATCTCATAAATTCTTTGGATCATATCTTCATCAAATATGTCAAAA--
ACCTTCCTCGCCTAGTTAAAATATAATTCAACAATATTCATTTTCCCATTTTGTTCAGAACAGCACTTTGTGAAGGAAGT
GCTATTTTTATATTCTTGATTGCCCTCAAAATTTTTGGGCACTCTTTCCTATCCAAATCATTGCCTCATGACCAAATTCA
GCTCCATTTGCCTAGTAAATCTTCCTCGGCAAATTTCCAAAGTTTTTT-GTCCACCTAGAAGCATTGTGAAGGAAGTAC-
>chr7A_1830
--------------------------------------------------------------------------------
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-----------------------------------------------CACTATAAGAAATATGTCAACTAGTGACCTTCT
GTCAGTGACCCTGAAAGAATTGGTCATAGATCTACGACCATTTGAGACCAATTGGTCAAAAGCTGCTAGGGGGGCTCCAA
ACCCTTAACTGTATCGACCATTTTGGCCATAAAGGTCGTAATTTCCTTACACGAAATGGTCATAAAGCAGACATCACTGA
TCCGCTGCCTTATTTCTAGCTGATCGCGACCAATATAGATGGTCATAACCTTGTAAGTTGTGGTGGATTGCTATGACTAG
GTGCCACCTCATCAGTTTTGCCTATGTGTCATGTCCATGTGTCAATTTTTGCCCTAGGTTGTGAAGCAACCTATATTTAT
GTCATTCCCAAAATTCCCAA---------AAAATTCTCATAAATTCTTTGGATCATATCTTCGTCAAATATGTCAAAA--
ACCTTCCTCGCCTAGTTAAAATATAATTCAACAATATTCATTTTCCTATTCTGTTCAGAATAGCACTTTCTGAAGGAAGT
GCTATTT-TATATTGTCGATTGCCCTCAAATTTTTTGGGCACTCTTTCCTGTCCAAATCATTCCCTCATGACAAAATCCA
GCTCCATTTGCATAGTAAATCTTTCTCGACAAATTTCCAAAG-TTTTT-GTCCACCTAGAAGCATTGTGAAGGAAGTAC-
>chr7A_1830
--------------------------------------------------------------------------------
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-----------------------------------------------CACTACAAGAAATATGTCAACTAGTGAAATTCT
ATCAGTGACCCTGGAAGAATTGGTCATAGATCTACGACCATCTGATACCAATTGGTCAAAAGCTTCTCGGGGA-CTCCAA
ACCCTCAACTATATCAACCATTTTGGCCATAAATGTCGTAATTTCCTTACACGAAATGGTCATAAAGCAGACAACACTGA
TCAACTGCCTTATTTCTAGCTGATCACGACCAATATAGATGGTCATAACCTTGTAAATTGTGGTGGATTGCTATGACTAG
GCGCCAACTCATTAGTTTTGCCTATGTGTCATGTCCATGTGTCAATTTTTACCCTAGGTTGTGAAGCAACC-ATATTTCT
GTCATTCCCAAAATTCCCCA---------AAAAATCTCATAAATTCTTTGGGTCATATCTTCGTCAAATATGTAAAAA--
TACTTCCTTGCCTAGTTCAAAAATAATTCAACAATATTCATTTTCCTATTCTGTTCAGAACATCACTTTGTGAAGGAAGT
ACTATTTATATATTCTTGATTGCCCTAAAAAATTTTGGGCACTCTTTCCTATCAAAATCATTGCCTCATGACAAAATTCA
GCTCCATTTGCCCAGCAAATCTTCCTCGGAAAATTTCCAAAG-TTTTT-GTCCACCTAGAAGCATTGTGAAGGAAGTAC-
>chr5D_1830
--------------------------------------------------------------------------------
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-----------------------------------------------CACTATAAGAAATATGTCAACTTGTGACCTTCT
GTCAGTGACCCTGGAAGAATTGGTCATTAATCTATGACCATTTGAGACCAATTGGTCAAAAGCTGTCCGGGGG-CTCCAA
ACCCTAAAATATATCGACCATTTTGGTCAGAAAGGTCGTAATTTCCTTACACGAAATGGTCATAAAGCAGACAACACTGG
TCCGCTACCTTATTTCTAGCTGATCACGACCAATATAGATGGTCATAACCTTGTAAATTATGGTGGATTGCTATGACTAG
GCGCCACCTCATCAGTTTTGCCTATGTGTCATGTCCATGTGTCAATTTTTTCCCTAGGTTGTGAAGCAAGCTATATTTCT
GTTATTCCCAAAATTCCCAA---------AAAATTCTCATAAATTCTTTGGATAATACCTTCATCAAATATGTCAAAA--
ACCTTCCTCGCCTAGTTCAAATATAATTCAAAAATATTCATTTTCCTATTCTGTTCAAAACAACACTTTGTGAAGGAAGT
TCTATTTATATATTATTGATTGCCCTAAAAAATTTTGGGCACTCTTTCCAATCCAAATCATTGCCTCATGACAAAATTCA
GCTCCATTTGCCTAGTAAATGTTCCTCGGCAAATTTCCAAAG-TTTTT-GTTCAGCTAGAAGCTTCGTGAAGGAAGTACT
>chr5D_1830
--------------------------------------------------------------------------------
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-----------------------------------------------CACTACAAGAAACATGTCAACTTGTGACTTTCT
GTCAGTGACCTTGGAAGAATTGGTCGTAAATCTACCACCATTTGAGACCAATTGGTCAAAAGCTGTTCGGGGGGATCCAA
ACCCTAAACTATATTGACAATTTTGGTCAGAAAGGTCGTAATTTCCTTACACGAAATGGTCATAAAGTAGACAGCACTGG
TCCGCTGCCTTATTTCTAGCTGATCACGACCAATATAGATGGTCATAACCTTGTTAATTGTGGTGGATTGCTATGACTAG
GCGCCACCTCATCAGTTTTGCCTATGTGTCATGTCCATGTGTCAATTTTTGTCCTAGTTTGTGAAGCAACCTATATTT-T
GTCATTCCCAAAATTTCCAA---------AAAAATCTGATAAATTCTTTGGGTCATATCTTCGTCAAATATTTAAAAA--
TCCTTCCTTGCCTAGTTCAAAAATAATTCAACAATATTCATTTTCCTATTCTGTTCAGAATAGCACTTTGTGAAGGAAGT
GCTATTTATATATTCTTGATTGCCCTCAAAATTTTTGGGCTCTCTTTCCTATCCAAATCATTGCCTCATGACAAAATTCA
GCTCCATTTTCCCAGTAAATCTTCCTCGGCAAATTTCCAAAG-TTTTT-GTCCACCTAGAAGCATTGTGAAGGAAGTAC-
>chr1A_1830
--------------------------------------------------------------------------------
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-----------------------------------------------CACTACAAGAAATATGTCAACTAGTGACCTGTT
TTCAGTGACCTTGGAAGAATTGGTCATAGATCTATGACCATTTGAGACCAATTGGTCAAAAGCTGTTCGGAGGACTCCAA
ACACTAAACTATATCGACCATTTTGGTCAGGAAGGTCGTAATTTCCTTACACGAAATGGTCACAAATCAGATAGCACTGA
TCCGCTGCCTTATTTCTAGCTGGTCATGACCAATATAGATGGTCATAACCTCGTAAGTTGTGGTGGATTGCTATGACTAG
GCGCCACCTCATCAGTTTTGCCTATGTGTCATGTCCATGTGTCAATTTTTGCCCTAGGTCATGA-----CCAATATTTCT
GTTAGTCCC-AAAATTCCGA---------AAAATTCTCAAAAATTCTTTGGATTATATCTTCGTCAAATATGTCAAAA--
ACCTTCCTCACCTAGTTAAAATATAATTCAACAATATTCATTTTCCTATTCTGATCAGAACGACACTTTGTGAAGGAAGT
GCTATTTTTATATTCTTGATTGCCCTAAAAAAATTTGGGCACTCTTTCCTATCCAAACCATTGCCTCATGACAAAATTCA
GCTCCATTTGCCCAGTAAATCTTCCTCGGCAAATTTCCAAAG-TTTTT-GTCCACCTAGAAGCATTGTGAAGGAAGTACT
>chr3A_1830
--------------------------------------------------------------------------------
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-----------------------------------------------CACTATAAGAAATATGTCAACTAGTGACCTTTT
GTCAGTGACCCTAGAAGAATTGGTCATAGATCTACAACCATTTGAGACCAATTGGTCAAAAGCTGCTCGGGGGGCTCCAA
ACCCTCGACTATATCAACCATTTTGGCCATAAAGGTCATAATTTCCTTACACGAAATGGTCATAAAGCAGACAACACTGA
TTCGCTGCCTTATTTCTAGCTGATCACGACCAATATAGATGGTCATAACCTTGTAAGTTGTGGTGGATTTCTATGACTAG
GCGCCACCTCATCAGTTTTGCCTATGAGTCATGTCCATGTGTCAGTTTTTACCCTAGGTTGTGAAGCAACCTATATTTAT
GTC---------ATTCCCAAAATTCCCAAAAAAATCTCATAAATTCTTTGGATCATATCCTAGTCAAATATGTAAAAAAA
ACCTTCCTCGCCTAGTTAAAATATAATTCAACAATATTCATTTTCCTATTCTGTTTAGAACAACACTTTGTGAAGTAAGT
GCTATTTTTATATTCTCGATTGCCCTCAAAAATTTTGGGCACTCTTTCCTGTCCAAATCATCCCCTCATGACAAAATTCA
GCTCCATTTGCACAGTAAATCTTTCTAGACAAATTTCCAAAG-TTTTT-GTCCACCTAGAAGTATTGTGAAGGAAGTAC-
>chr3D_1830
--------------------------------------------------------------------------------
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-----------------------------------------------CACTACAAGAAATATGTCAACTAGTGACCTTCT
GTCAGTGACCCTGAAAGAATTGGTCATAGATCTATGACCATTTGAGACCAATTGGTCAAAAGCTGTTCGGGGGGCTCCAA
ACCCTAAACTATAACGACTATTTTGGTCAGAAAGGTCGTAATTTCCTTACATGAAATGGTCATAAAGCAGATAGCACTGG
TCCGCTGCCTTATTTCTAGCTGATCATGACCAATATAGATGGTCATAACCTTGTAAATTATGGTGGGTTGCTATGACTAG
GCGCCACCTCATCAGTTTTGCCTATGTGTCATGTCCATGTGTCAGTTTTTGCCCTAGGTTGTGAAGCAACCTATATTTCT
GTC---------ATTCCCAA---------AAAAATCTCATAAATTCTTTGGGTCATATCTTCGTCAAATATGTAGAAA--
ACCTTCCTTGCCTACTTCAAAAATAATTCAACAATATTCATTTTCGTATTCTGTTCAGAACAACACTTTGTGAAGGAAGT
GCTATTTATATATT-TTTATTGCCCTCAAAATTTTTGGGCACTATTTCCTATCCAAATCATTGCCTCATGACAAAATGAA
GCTCCATTTGCCCAGTAAATCTTCCTCGGCAAATTTCCAAAG-TTTTT-GTCCACCTAGAACCTTTGTGAAAGAAGTACT
>SNPs
S----S---S-----S-------S------S------S---------------------------S---S-S--------
--SS--------S--------S---S------------SS---S-S---------S-S----S-----------------
--S---S---SS-------S-SS--S--SS---S-----SSS---S------------------SS------S------S
-SS-------S--S----S-S---------S-SS----S-------S---------S---S----------SS-S-----
--S--SS-----S-----SS--S---S--S----------------S----S------S------SSSSS---S--S---
S--------------S----S---S---SS-----S-----------------------------SSS------------
----SSS--------S---------------------S------S-------SSS-SSS-SSSSSSSSS-SS-SS--SSS
SS-S-SSSSSSSSS-SS-SSSSSSSSS-SSSS-SSSSSSSS-SSSSSSS-SS-SSSSSS---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------S---S------
-----------S----SSS-------S----SS--------------S--------------S-----------------
-S-------------------S--S-------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S-S-----SSSSSSSSS-SSSSS-----------
--------------------------------------------------------------------------------
----------------------------------------------------------SS-S------S-SS-S------
-------S-S-------------S-----S--------S---------S----S-SSS------------S------S--
---------S--------------------S----------------SSS-SSS-SS-SS-SSSSSSSSSSSSSSSS---
----------------SS-S---------S-S------S--S-------------------S------------------
-------S---SSSSS-SSSS-SSSSSSSSSSS--------------------S--------------------------
---------------------S------SSS--------------SS--SSS-S---------SS----S--S---SS--
-S-----S---------S---SS---SS-S-SSSS-SSS---SSSSSSSSSSSSSSSSSSSSSS----------------
--------S------------------S--S-S--------S------------------------------S-------
S--------------------S-------------------S--------------------------------------
------------S----S-SSSSSS-S-------------------------------------------SS-------S
------------S----SS----S----------S----------------S-S--------------------------
SS--------------S---------------------S------S----S------SSSS--SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS----S------S---S-----S---SS------------S-----S------------SS-----
---S----S-----SS----------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------SS----------------S--------------S------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S------------------------S------
>forward_611
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-------------------------------GGTAACTTCCTCACCCGGTG-----------------------------
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>reverse_2579
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------------------AGGACCTGGTAGCTTCACCT------------------------------------------
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