>input_sequence_78811
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--------------ATGCAACTAATACTCAATTTTCTAGGACTTGATACATCATGGTCTTCTTGTGCTTTGTTGTTTGGT
TGGTGTAGAATCCCTCAGCTCTTACCAAGAGGCCCTAGCTTCGAACCTGACTCTTTTAGTAGTTGGAGTGTTGCACACAT
GGAATTGATCGCAGGTACTTCATCTAAAGATCCCAAGATCAGAATTTTATTACCCTATGTCGAGACCTGCATTTTTGCTA
TGGTGCACTCTAAGCTTTCTAAATTTTGTTATGAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTTTAGAGAGGAAGCGAAGCAGCA
ACAGTTTGGGTTCAGAGAAGATTAGGAGCAGCAGTTCATT----GGAGAAGGAGAGGTACAGCAGCCGAGGGAAGCAACA
GAGAGCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
GAATCAGCAGTTCAGGGGCGGCAGCAGAGGACCAGAAGTAGAGATGAGTTCGATTCAATTGCCATTGATAATGATTCAGA
TTTGAGTTTGCACCACCCTTGTGTTACTAAATAG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr7A_1_TraesCS7A01G280200
AATATAGTACGAAGGAACTATAGCAAGTGAATTGTTGAGTTTGCCAAGCATAATGGCA---------CACCTAATTTTGG
CAGATCATATAAAGAGAATATCGAGCAAAGATGCTTTGAGATTTACCCATGACTATATGCGGTTCCTATAATTAAACTCC
TGTTGCATGTTTAATGATTGCCACAATAGTTTCTTTTAATGCACCAGAGAATTATATTTTTTGTATCAGGTAAATAATTC
TTTTCTCACTGTTATTTTTCCAGATCAAGATCGAGATATAGACAAGGGGTAATGGCAGCTCGTGCAGTGATAGAGTGTTG
GGGAGGCTGCCGGTGTCGTTGCCTAGCGCTGGGGAGGCTGCTGAACAAGTTTATCTATTTGTCGTG--------------
-----------------------TGAGCAGTTGGCCATCTCTTATTCTGTGGGGATATGGTCCGTTTGTATTCTTCTAAT
TAATTCGGTTCACAATTCTAGCCGATGAAATTTGGTCTACATTTATGTGTACGTATGCTATCCTATATACTGGAACTTGT
GCTTGCCCATTATATGATTATACAACA-AGTAGACAAATGCAAATGTCCATAGTAATAAACTTGTGGTCACATGACTACT
AGCTTAAAGTTTGTTAGATTATGTAAATGGGCATTTTT-TTTGTCTGCTCTTTAGGTTTCCATAGCATGAGGTGGTGCTC
TTGC-TTTTAAAAACACATATAAACTGCCATCTATACTGAACAATGGGGCTTCCTGTCTAAACTGGAGCAGTAATTTGAG
GCTGAAAGGACCAACATTAGCAGCAATAGTATAA--ATAT--CCATTAGAAGAGTTTTCTGCACTGAGTCCGTGGGTCTC
ACAAAGATATAAGATATATAGAATGTTGTAAAGATCAGCTTACCTTCTCATGCAATGGAACAATTGTGTGTCTTGATCTT
TCCCGTTTTCTTTGGTTTTGCAGCCTAGAATTTTTAGACATGCACATATAGATTGGAGCATCTAATAGTAGTTG-AAAAT
GTTTTTGAGTAAAAATGCAACTAATACTCAATTTTCTAGGACTTGATACATCATGGTCTTCTTGTGCTTTGTTGTTTGGT
TGGTGTAGAATCCCTCAGCTCTTACCAAGAGGCCCTAGCTTCGAACCTGACTCTTTTAGTAGTTGGAGTGTTGCACACAT
GGAATTGATCGCAGGTACTTCATCTAAAGATCCCAAGATCAGAATTTTATTACCCTATGTCGAGACCTGCATTTTTGCTA
TGGTGCACTCTAAGCTTTCTAAATTTTGTTATGAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTTTAGAGAGGAAGCGAAGCAGCA
ACAGTTTGGGTTCAGAGAAGATTAGGAGCAGCAGTTCATT----GGAGAAGGAGAGGTACAGCAGCCGAGGGAAGCAACA
GAGAGCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
GAATCAGCAGTTCAGGGGCGGCAGCAGAGGACCAGAAGTAGAGATGAGTTCGATTCAATTGCCATTGATAATGATTCAGA
TTTGAGTTTGCACCACCCTTGTGTTACTAAATAGTTTG-TCCTTTTTCACTTGTGATTATGCACTAGAGATTTGCAAGGA
TGCATTGGATTCTTTTTATACTGATTTGATGCACTCTGACTTTGGAATGCGAACAAATGTGATCTTCAATTGGCATTGAT
GATTCAGACTTTAGTTTGCTA-AT---ACTGTAGCTGACATAACCTTGAGTGTTACTCCGCTATACTAAGTGGATTGAGC
TTTTTGTTATCCCGATATCTTGAAAGCAAACTCTGTTCAAGGTTCCTTCTTTATCTTAGGCTCAGTACAGTGCTCATAAT
CTCAACTGAGTAGCAA-GCTTATGGCTGGAGTGTATTTCAGTTGACCAACATGGCCGGAGATGTAAACCAAACTGACAAC
AGAGATATCCAGTCTCTCATGCTTTATTCTTCACTAGATGACTCGTTGCGCCCATGGCGCAAAGGGCGATAGGAAGCCAA
GTATTGAAAGAGTGTGCATAAAAAAATCAGACTGCATCAATTTTTACTCTGTATATTTTGTATAGCGTAAACAAATAGAT
ATGTGGGTATGAGCTAAATTTTTTTCATGCCTTTTAAAAAGAGAAATATGCTTATGAAATCCAGCAAGTGAATATTATAA
GTATGCATTGACACGAAAACTTTTTTCCTTTTATATGGAAAAGGTATTTCCTTGAAAAGAAAATAAAGAATTGAATGGAG
TTTGACCTTTTTAGATACTTTTAGTTGAAGATCCCTTGCAAAATAAGCAGCAACGTAATTGTTCTTATTTTTCTTTGCAC
ATACTGTGATCACAAGACATGATTACAGAAAATCTTTAATCAAAGCATTGAAGTGAAAGTGTGCATAGAAGGAGAGGTTG
TTTCTTTAATTATAGTGTTCTGGAAATAACAGTAGAATAGCAATCCTATACATATATAATAAGTGATGATAAACTGCTCT
TGACCACAGAGATAACGAAATCTAAAGTTTATAGACTGCACCATTCACTACTTTTCACCATAGAGGCAGCAATGGAAGAC
>chr4A_1
AATATAGTACGAAGGAACTATAGCAAGCGAATTGTTGAGTTTGCCAAGCATAATGGCAGAAGAAGCACACCTAATTTTGG
CAGATCATATAAAGAGAATATCGAGCAAAGATGCTTTGAGATTTACCCATGACTATATGCGGTTCCTA----TAAAGTCC
TGTTGCATGTTTAATGATTGCCACAATAGTTTCTTTTCATGCACCAGAGAATTATATTTTTTGTATCAGGTAAATAATTC
TTTTCCCACTGTTATTTTTCCAGATCAAGATCGAGAGATAGACAAGGGGTAATGGTAGCTCGTGCAGTGATAGAGTGCTG
GGGAGGCTGCCGGTGTCGTTGCCGAGTGCTGGGGAGGCTGCTGAACAAGTTTATTTATTTGTCGTGTGAATTGTTCCACA
CTTCTGATCATCATATTGTATGATGAGCAGTTGGCCATCTCTTATTCTGTGGGGATATGGTCCGTTTGTATTCTTCTAAT
TGATTCGGTTCACAATTCTAGCCGATGAAATTTGGTCTACATTTATGTGTACGTATGCTATACTATATACTGGAACTTGT
GCTTGCCCGTTATATGATTATACTACA-AGTAGACAAATGTAAATGTCCATAGTAATAAACTTGTGGTCATAGGACTACT
AGCTTAAAGTTTGTTAGATTATGTAAATGGGCATTTTT-GTTGTCTGCTCTTTAGGTTTCCATAGCATGAGGTGGTGCTC
TTGCTTTTTAAAAACACATATAAACTGCCATCTATACTGAACAATGGGGCTTCCTGTCTAAACTGGAGTAGTAATTTGAG
GCTGAAAGGACCAACATTAGCAGCAATAATATTA--ATAT--CCATTAGAAGAGTTTTCTGCACTGAGCCCGTGGGTCTC
ACAAAGATATAAGATATATAGAATGTTGTAAAGATCAGCTTACCTTCTCATGCAATGGAACAATTGTGTGTCTTGATCTT
TTCCGTTTTCTTTGGTTTTGCAGCCTAGAATTTTTAGGCACGCGCATATAGATTGGAGCATCTAATAGTAGTTG-AAAGT
GTTTTTGAGTAAAAATGCAACTAATACTCAATTTTCTAGGACTTGATACATCATGGTCTTCTTGTGCCTTGTTGTTTGGT
TGGTGTAGAATCCCTCAGCTCTTACCAAGAGGCTCTAGCTTCGAACCTGACTCTTTTAGTAGTTGGAGTGTTGCACACAT
GGAATTGATCGCAGGTACTTCATCTAAAGATCCCAAGATCAGAATTTTATTACCCTATGTCGAGACCTGCATTTTTGCTA
TGGTGCACTCTAAGCTTTCTAAATTTTGTTACGAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTTTAGAGAGGAAGCGAAGCAGCA
ACAGTTTGGGTTCAGAGAAGATTAGGAGCAGCAGTTCATT----GGAGAAGGAGAGGTACAGCAACCGAGGGCAGCAGCA
GAGAGCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
GAATCAGCAGGTCAGGGGCGGCAGCAGAGGATCAGAAGCAGAGATGAGTTCGATTCAATTGCCATTGATAATGATTGAGA
CTTGAGTTTGCACCACCCTTGTTTTACTAAATAGTTTG-TCCTTTTTCACTTGTGATTATGCACTAGAGATTTGCAAGGA
TGCATTGGATTCTTTTTATACTGATTTGATGCACTCTGACTTTCGAATGCGAACAAATGTGATCTTCAATTGGCATTGAT
GATTCAGACTTTAGTTTGCTAA-T---ACTGTACTTGACATAACCTTGAGTGTTACTCCGCTATACTAAGTGGATTGAGC
TTTTTGTTATCTCGGTGTCTTGAAAGCAAACTCTGTTCAAGGTTCCTTCTTTATCTTAGGCTCAGTACAGTGCTCATAAT
CTCAACTGAGTAGCAA-GCTTATAGCTGGAGTGTATTTCAGTTGACCAACATGGCCGGAGGTGTGAACCAAACTGACAAC
AGAGATATCCAGTCTCTCATGCTTTATTCTTCA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>chr1A_1
AATATATTACGAAGGAACTATAGCAAGCGAATTGTTGAGTTTGCCAAGCATAATGGCAGAAGAAGCACACCTAATTTTGG
CAGATCATATAAAGAGAATATCGAGCAAAGATGCTTTGAGATTTACCCATGACTATATGCGGTTCCTA----TAAACTCC
TGTTGCATGTTTAATGATTGCCACAATAGTTTCTTTTCATGCACCAGAGAATTATATTTTTTGTATCAGGTAAATAATTC
TTTTCTCACTGTTATTTTTCCAGATCAAGATCGAGAGATAGACAAGGGGTAATGGTAGCTCGTGCAGTGATAGAGTGCTG
GGGAGGCTGTCGGTGTCGTTGCCTAGTGCTGGGGAGGCTGCTGAACAAGTTTATCTATTTGTCGTGTGAATTGTTCCACA
CTTCTGATCATCATATTGTATGATGAGCAGTTGGCCATCTCTTATTCTGTGGGGATATGGTCCGTTTGTATTCTTCTAAT
TGATTCGGTTCACAATTCTAGCCGATGAAATTTGGTCTACATTTATGTGTACGTATGCTATCCTATATACTGGAACTTGT
GCTTGCCCATTATATGATTATACTACA-AGTAGACAAATGTAAATGTCCATAGTAATAAACTTGTGGTCATAGGACTACT
ACCTTAAAGTTTGTTAGATTATTTAAATGGGCATTTTT-GTTGTCTGCTCTTTAGGTTTCCATAGCATGAGGTGGTGCTC
TTGC-TTTTAAAAACACATATAAACTGCCATCTATACTGAACAATGGGGCTTCCTGTCTAAACTGGAGTAGTAATTTGAG
GCTGAAAGGACCAAC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>chr3D_378
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TGAGCAGTTGGCCATCTCTTATTCTGTGGGGATATGGTCCGTTTGTATTCTTCTAAT
TGATTCGGTTCACAATTCTGGCCAATGAAATTTGGTCTACATTTATGTGTACGTATGCTATCCTATATACTGGAACTTGT
GCTTGCCCATTATATGATTATACTACA-AGTAGACAAATGCAAATGTCCATAGTAATAAAGTTGTGGTCACAGGACTACT
AGCTTAAAGTATGTTAGATTATGTAAATGGGCATTTTT-GTTGTCTGCTCTTTAGGTTTCCATAGCATGAGGTGGTGCTC
TTGC-TTTTAAAAACACATATAAACTGCCATCTATACTGAACAATGGGGCTTCCTGTCTAAACTGGAGCAGTAATTCGAG
GCTGAAAGGACCGACATTAGCAGCAATAATATAA--ATAT--CCATTAGAAGAGTTTTCTGCACTGAGTCCGTGGGTCTC
ACAAAGATATAGGATAGATAGAATGTTGTAAAGATCAGCTTACCTTCTCATGCAATGGAACAATTGTGTGTCTTGATCTT
TCCCGTTTTCTTTGGTTTTGCAGCCTAGAATTTTTAGACATGCGCATATAGATTGGAGCATCTAATAGTAGTTG-AAAAT
GTTTTTGAGTAAAAATGCAACTAATACTCAATTTTCTAGGACTTGATACATCATGGTCTTCTTGTGCTTTGTTGTTTGGT
TGGTGTAGAATCCGTCAGCTCTTACCAAGAGGCTCTAGCTTCGAACCTGACTCTTTTAGTAGTTGGAGTGTTGCACGCAT
GGAATTGATCGCAGGTACTTCATCTAAAGATCCCAACATCAGAATTTTATTACCCTATGTCGAGACCTGCATTTTTGCTA
TGGTGCACTCTAAGCTTTCTAAATGTTGTTATGAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTTCAGAGAGGAAGCGAAGCAGCA
ACAGTTTGGGTTCAGAGAAGATTAGGAGCAGCAGTTCATT----GGAGAAGGAGAGGTACAGCAGCGGAGGGTAGCAGCA
GAGAGCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
GAATCAGCAGGTCAGGGGCGGCAACAGAGGATCAGAAGCAGAGATGAGTTCGATTCAATTGCCATTGATAATGATTCAGA
CTTGAGTTTGCACCACCCTTGTGTTACTAAATAGTTTG-TCCTTTTTCACTTGTGATTATGCACTAGAGATTTGCAAGGA
TGCATTGGATTCTTTTTATACTGATTTGATGCACTCTGACTTTGGAATGCGAACAAATGTGATCTTCAATTGGCATTGAT
GATTCAGACTTTAGTTTGCTAAAT---AATGTAGCTGACATAACCTTGAGTGTTACTCGGCTATACTAAGTGGATTGAGC
TTTTTGTTATCCCGATGTCTTGAAAGGAAACTCTGTTCAAGGCTCCTTCTTTATCTTAGGCTCAGTATAGTGCTCATAAT
CTCAATTGAGTAGCAA-GCTTATGTCTGGAGTGTATTTCAGTTGACCAACATGGCCGGAGGTGTGAACCAAACTGACAAC
AGAGATATCCAGTCTCTCATGCTTTATTCTTCA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>chr3D_378
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TGAGCAGTTGACCATCTCTTATTCTGTGGGGATATGGTCCGTTTGTATTCTTCTAAT
TGATTCGGTTCACAATTCTAGCCGATGAAATTTGCTCTACATTTATGTGTACGTATGCTATCCTATATACTGGAACTTGT
GCTTGCCCATTATATGATTATACTACA-AGTAGACAAATGCAAATGTCCATAGTAATAAACTTGTGGTCACAGGACTACT
AGCTTAAAGTTTGTTAGATTATGTAAATGGGCATTTTT-GTTGTCTGCTCTTTAGGTTTCCATAGCATGAGGTGGTGCTC
TTGC-TTTTGAAAACACATATAAACTGCCATCTATACTGAACAATGGGGCTTCCTGTCTAAACTGGAGCAGTAATTCAAG
GCTGAAAGGACCGACATTAGCAGCAATAATATAA--ATAT--CCATTAGAAGAGTTTTCTGCACTGAGTCCGTGGGTCTC
ACAAATATATAAGATATATAGAATGTTGTAAAGATCAGATTACCTTCTCATGCAATGGAACAATTGTGTGTCTTGATCTT
TCCCGTTTTCTTTGGTTTTGCAGCCTAGAATTTTTAGACATGCGCATATAGATTGGAGAATCTAATAGTAGCTG-AAAAT
GTTTTTGAGTAAAAATGCAACTAATACTCAATTTTC-AGGACTTGATACATCATGGTCTTCTTGTGCTTTTTTGTTTGGT
TGGTGTAGAATCCCTCAGCTCTTACCAAGAGGCTCTAGCTTCGAACCTGACTCTTTTAGTAGTTGAAGTGTTGCACGCAT
GAAATTGATCGCAGCTACTTCATCTAAAGATCCCAAGATCAGAATTTTATTACCCTATGTCGAGACCTGCATTTTTGCTA
TGGTGCACTCTAAGCTTTCTAAATTTTGTTATGAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTTTAGAGAGGAAGTGAAGCAGCA
ACAATTCGGGTTCAGAGAAGATTAGGATCAACAGTTCATT----GGAGAAGGAGAGGTACAGCAGCAGAGGGTAGCAGTA
GAGAGCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
GAATCAGCAGGTCAGGGGCGGCAGCAGAGGATCAGAAGCAGAGATGAGTTCGATTCAATTGCCATTGATAATGATTCAGA
CTTAAGTTTACACCACCATTGTGTTATTAAATATTTTG-TCCTTTTTCACTTGTGATTATGCACTAGAGATTTGCAAGGA
TGCATTGGATTCTTTTTACACTGATTTGATGCACTCTGACTTTGGAATGCGAAAAAATGTTATCTTCAATTGGCATTGAT
GATTCAGACTTTAGTTTGCTAA-T---ACTGTAGCTGACATAACCTTGAGTGTTACTCGGCTATACTAAGTGGATTGAGC
TTTTTGTTATCCCAGTGTCTTGAAAGCAAACTCTGTTCAAGGTTCCTTCTTTATCTTAGGCTCAGTACAGTGCTCATAAT
ATCAATTGAGTAGCAA-GCTAA-GGCTAGAGTGTATTTCAGTTGACCAACATGGCCGGAGGTGTGAACCAAACTGACAAC
AGAGAT--CCAGTCTCTCATGCTTTATTCTTCA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>chr3D_378
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TGAGCAGTTGGCCATCTATTATTCTGTGGGGATGTGGTATGTTTGTATTCTTCTAAT
TAATTCGGTTCAGAATTCTAGACAATGGAATTTGGTCCACATTTATGTGTACATATGCTCTCCTATATACTGGAAACTTG
--------------TGGTTTTACTACA-AGTAGACAGATGCAAATGTCCATAGTAATAAACTTGTGGTCACAGGACTACT
AGGTTAAAGTATGTTAGATTATGTAAATGGGCAT-TTT-GTTGTCTGCTCTTTAGGTTTCCATAGTATGAGGTGGTGCTC
TTGC-TTTTAAAAACACATATAAACTGCCATCTATACTGAACAATGGGGCTTCCTATCTAAACTGGAGCAGTAATTCGAG
GCTGAAAGGACTGACATTAGCAGCAATAATATAA--ATAT--CCATTAGAAGAGTTTTCTGCATTGAGTCCATGGATCTC
ACAAAGATGTAGGATAGATAGAATGTTGTAAAGATCATCTTACCTTCGCATGCAATGGAACAATTGTGTGTCTTGATATT
TCCTGTTTTCTTTGCTTTTGCAGCCTAGAAATTTTAGACATGCGCATATAAATTGGAGCATCTAATAGTTGTTGAAAAAT
GTTTTCGAGTAAAGATGCAACTAATACTCAGTTTTCTAGGACTTGATACATCATGG---TCTTGTGCTTTGTTGTTTTGT
TCGTGTAGAATCCGTCAGCTCTTACCAAGAGGCTCTAGCTTCAAACCTGACTCTTTTAGTAGTTGGATCGTTGCACGCAT
GGAATTGATCGCAGGTACTTCATCTGAAGATCACAAGATCAGAATTTTATTACTCGATGTCGAGACCTGCATTTTTGCTA
TGGTGCATTCTAGGCTTTCTAAATGTTGTTATGGG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTTCAGAGAGGAAGCGGAGCAGCA
ATAGTTTGGGTTTAGAGAAGATTAGGAGCAGCAGTTCATT----GGAGAAGGAGAGGTACAGCAGCCGAGGGCAACAACA
GAGAGCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
GAAGTAGTAGGTCAGGTGCGGCAGCAGAGGATCAGAAGCAGAGATGAGTTCGATTCAGTTGCCATTGATAATGATTCAGA
CTTGAATCTGCACCACCCTTGTGTTACTAAATAGTTTG-TCCCTTTTCACTTGTGATTATGCACTTGGGATTTGCAAGGA
TGCATTGCATTGTTTTTATACTAATTTGATGCACTCTGACTTTGGAATGCGAACAAATGTGATCTTCAATTGGCATTCAT
GATTCAGACTTTAATTTGCTAA-T---ATTGTAGCTGACATAACTTTGAGTGTTACTCGGCTATACCAAGTGGATTGAGA
TTTTTATTATCCTGATGTCCTGAAAGCAAACTTTGTTCAAGGTTCCTTCTTTATCTTAGGCTTAGTATCGTGCTCATAAT
CTCAATTGAGTAGCAA-GCTTATGGCTTGAGTGTATTTCAGTTGACCAACATGGCTGGAGGTGTGAACCAAACTGACAAC
AGAGATATCTAGTCTCTCATGCTATATTCTTCA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>chr5B_378
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TGAGCAGTTGGCCATCTCTTATTCTGTGGGGATATGGTCCGTTTGTATTCTTCTAAT
TGATTCGGTTCACAATTCTAGCCGATGAAATTTGGTCTACATTTATGTGTACGTATGCTATCCTATATACTGGAACTTGT
GCTTGCCCATTATATGAT--TACTACA-AGTAGACAAATGCAAATGTCCATAGTAATAAACTTGTGGTCACAGGACTACT
AGCTTAAAGTTTGTTAGATTATGTAAATGGGCAT-TTTTGTTGTCTGCTCTTTAGGTTTCCATAGCATGAGGTGGTGCTC
TTGC-TTTAAAAAACACATATAAACTGCCATCTATACTGAACAATGGGGCTTCCTGTCTAAACTGGAGCAGTAATTCGAG
GCTGAAAGGACCGACATTAGCAACAATAATATAAATATAT--CCATTAGAAGAGTTTTCTGCACTGAGTCCGTGGGTCTC
ACAAAGATATAAGATATATAGAATGTTGTAAACATCAGCTTACCTTCTCATGCAATGGAACAATTGTGT--CTTGATCTT
TCCCGTTTTCTTTGGTTTTGCAGCCTAGAATTTTTAGACATGCGCATATAGATTGGAGCATCTAATAGTAGTTG-AAAAT
GTTTTTGAGTAAAAATGCAACTAATACTCAATTTTCTAGGACTTGATACATCATGGTCTTCTTGTGCTTTGTTGTTTGGT
TGGTGTAGAATCCCTCAGCTCTTACCAAGAGGCTCTAGCTTCGAACCTGACTCTTTTAGTAGTTGGAGTGTTGCACGCAT
GGAATTGATCGCAGGTACTTCATCTAAAGATCCCAAGATCAGAATTTTATTACCCTATGTCGAGACCTGCATTTTTGCTA
TGGTGCACTCTAAGCTTTCTAAATTTTGTTATGAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTTTAGAGAGGAAGCGAAGCAGCA
ACAGTTTGGGTTCAGAGAAGAATAAGAGCAGCAGCTCATT----GGAGAAGGAGAGGTACAGCAGCCGAGGGCAGCAGCA
GAGAGCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
GAATCAGCAGGTCAGGGGCGGCAGCAGAGGATCAGAAGCAGAGATGAGTTCGATTCAATTACCATTGATAATGATTCAGA
CTTGAGTTTGCACCACCCATGTGTTACTAAATAGTTTG-TCCTTTTTCACTTGTGATTATGCACTAGAGATTTGCAAGGA
TGCATTGGATTCTTTTTATACTGATTTGATGCACCCTGACTTTGGAATGCGAACAAATGTGATCTTCAATTGACATTGAT
GATTCAGACTTTAGTTTGCTAA-T---ACTGTAGCTGACATAACCTTGAGTGTTACTCGGCTATACTAAGTGGATTGAGC
TTTTTGTTATCCCGATGTCTTGAAAGCAAACTCTGTTCAAGGTTCCTTCTTTATCTTAGGCTCAGTACAGTGCTCATAAT
CTCAATTGAGTAGCAA-GCTAA-GGCTGGAGTGTATTTCAGTTGACCAATATGGCCGGAGGTGTGAACCAAACTGACAAC
AGAGATATCCAGTCTCTCATGCTTTATTCTTCA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>chr2D_378
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TGAGCAGTTGGCCATCTCTTATTCTGTGGGGATATGGTCCGTTTGTATTCTTCTAAT
TGATTCGGTTCACAATTCTAGCCGATGAAATTTGGTCTACATTTATGTGTACGTATGCTATCCTATATACTGGAACTTGT
ACTTGCCCATTATATGAT--TATACTGCAGTAGAAAAATGCAAATGTCCATAGTAATAAACTTGTGGTCACAGGACTACT
AGCTTAAAGTTTGTTAGATTATGTAAATGGGCAT-TTTTGTTGTCTGCTCTTTAGGTTTCCATAGCATGAGGTGGTGCTC
TTGC-TTTTAAAAACACATATAAACTGTCATCTATACTGAACATTGGGGCTTCCTGTCTAAACTGGAGCAGTAATTCGAG
ACTGAAAGGACCGACATTAGTAGCAATAATACAA--ATATATCCATTAGAAGAGTTTTTTGCACTGAGTCCGTGGGTCTC
ACTAAGATATAAGATATATAGAATGTTGTAAAGATCATCTTCCCTTCTCATGCAATGGAACAATTGTGT--CATGATCTT
TCCCGTTTTCTTTGGTTTTGCAGCCTAGAATTTTTAGACATGCGCATATAGATTGGAGCATCTAATAGTAGTTG-AAAAT
GTTTTTGAGTAAAAATGCAACTAATACTCAATTTTCTAGGACTTGATACATCATGGTCTTCTTATGCTTTGTTGTTTGGT
TGGTGTAGAATCCCTCAGCTCTTACCAAGAGGCTCTAGCTTCGAACCTGACTCTTTTAGTAGTTGGAGTGTTGCACGCAT
GGAATTGATTGCAGGTACTTCATCTAAAGATCCCAAGATCAGAATTTTATTACCCTATGTCGAGACCTGCATTTTTGCTA
TGGTGCACTCTAAGCTTTCTAAATTTTGTTATGAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTTTAGAGAGGAAGTGAAGCAGCA
ACAGTTTGGGTTCAGAGAAGATTAGGAGCAACAGTTCATT----GGAGAAGGAGAGGCACAGCAGCCGAGGGCAGCAACA
GAGAGCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
GAATCAGCAGGTCAGGGGCGGCAGCAGAGGATCAGAAGTAGAGATGAGTTTGATTCAATTGCCATTGATAATGATTCAGA
CTTGAGTTTGCACCACCCTTGTGTTACTAAATAGTTTG-TCCTTTTTCACTTGTGATTATGCACTAGAGATTTGCAAGGA
TGCATTGGATTCTTTTTATACTGATTTGATGCACTCTGACTTTGGAATGCGAACAAATGTGATCTTCAACTGGCATTGAT
GATTCAGACTTTAGTTTGCTAA-T---ACTGTAGCTGACATAACCTTGAGTGTTACTCGGCTATACTAAGTGGATTGAGC
TTTTTGTTATCCCGATGTCTTGAAAGCAAACTCTGTTCAAGGTTCCTTCTTTATCTTAGGCTCAGTACAGTGCTCATAAT
CTCAATTGAGTAGCAA-GCTAA-GGCTGGAGTGTATTTCAGTTGACCAACATGGCCGGAGGTGTGAACCAAACTGACAAC
AGAGATATCCAGTCTCTCATGCTTTATTCTTCA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>chr2A_378
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TGAGCAGTTGGCCATCTCTTATTCTGTGGGGATATGGTCCGTTTATATTCTTCTAAT
TGATTCGGTTCACAATTCTAGCCGATGAGATTTGGTCTACATTTATGTGTACATATGCTATCCTATATACTAGAACTTGT
GCTAGCCCATTATATGATTATACTACA-AGTAGACAAATGCAAATGTCCATAGTAATAAACTTGTGGTCACAGGACTACT
AGCTTAAAGTTTGTGAGATTTTGTAAATGGGCAT-TTTTGTTGTCTACTATCTAGGTTTCTATAGCATGAGGTGGTGCTC
TTGC-TTTTAAAAACACATATAAACTGCCATCTATACTGAACAATGGGGCTTCCTGTCTAAACTGAAGCAGTAATTCGAG
GCTGAAAGGACCGACATTAGCAGCAATAATATAA--ATAT--CCATTAGAAGAGTTTTCTGCATTGAGTCCGCGGGTCTC
ACAAAGATATAAGATATATAGAATGCTGTAAAGATCAGCTTACCTTCTCAGGCAATGGAACAATTGTGTGTCTTGATCTT
TCCCGTTTTCTTTGGTTTTGCAGCCTAGAATTTCTAGACATGCGCATATAGATTGGAGCATCTAATAGTAGTTG-AAAAT
ATTTTTGAGTAAAAATGCAACTAATACTCAATTTTCTAGGACTTGATACATCATGGTCTCCTTGTGCTTTGTTGTTTGGT
TGGTGTAGAATCCCTCAGCTCTTACCAAGAGGCTCTAGCTTCGAACATGACTCTTTTAGTAGTTGGAGTGTTGCACGCAT
GGAATTGATCGCAGGTACTTCATCTAAAGATCCCAAGATCAGAATTTTGTTACCCTATGTCTAGACCTACA-TTTTGCTA
TGGTGCACTCTAAGCTTTCTAAATTTTGTTATGAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTTTAGAGAGGAAGCGAAGCAGCA
ACAGTTTGGGTTCAGAGAAGATTAGGAGCAACAGTTCATT----GGAGAAGGAGAGGTACATCAGCCGAGGGCAGCAGCG
GAGAGCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
AAATCAGCAGGTTAGGGGCGGCAGGAGAGGATCAGAAGTAGAGATGAGTGCGATTCAATTGCCATTGATAATGATTCA-A
CTTGAGTTTGCACCATCCTTGTGTTACTAAATAGTTTTTTCCTTTTTCACTTGTGATTATGTACTAGAGATTTGCAAGGA
TGCATTGGATTCTTTTTATACTGATTTGATGCACTCTGACTTTGGAATGCGAACAAATGTGTTCTTCAATTGGCATTGAT
GATTCAGACTTTAGTTTGCTAA-T---ACTGTAGCTGACATAACCTTATGTGTTACTCGGCTATACTAAGTGGATTGAGC
TTTTTGTTATCCCGATGGCTTGAAAGCAAA-TCTGTTCAAGGTTTCTTCTTTATCTTAGGCTCAGTACAATGCTCATAAT
CTCAATTGAGTAGCAA-GCTTATGGCTGGATTGTATTTCAGTTGACCAACATGGTCGGAGGTGTGAACCAAACTGACAAC
AGAGATATCCAGTCTCTCATGCTTTATTCTTCA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>chr1A_764
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------AACATTAGCAGCAATAATATTA--ATAT--CCATTAGAAGAGTTTTCTGCACTGAGTCCGTGGGTCTC
ACAAAGATATAAGATATATAGAATGTTGTAAAGATCAGCTTACCTTCTCATGCAATGGAACAATTGTGTGTCTTGATCTT
TCGCGTTTTCTTTGGTTTTGCAGCCTAGAATTTTTAGACACGCGCATATAGATTGGAGCATCTAATAGTAGTTG-AAAAT
GCTTTTGAGTAAAAATGCAACTAATACTCAATTTTCTAGGACTTGATACATCATGGTCTTCTTGTGCTTTGTTGTTTGGT
TGGTGTAGAATCCCTCAGCTCTTACGAAGAGGCTCTAGCTTCGAACCTGACTCTTTTAGTAGTTGGAGTGTTGCATACAT
GGAATTGATCGCAGGTACTTCATCTAAAGATCCCAAGATCAGAATTTTATTACCCTATGTCGAGACCTGCATTTTTGCTA
TGGTGCACTCTAAGCTTTCTAAATTTTGTTACGAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTTTAGAGAGGAGGCGAAGCAGCA
ACAGTTTGGGTTCAGAGAAGATTAGGAGCAGCAGTTCATT----GGAGAAGGAGAGGTACAACAGCCGAGGGCAGCAGCA
GAGAGCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
GAATCAGCAGGTCAGGGGCGGCAGCAGAGGATCAGAAGCAGAGATGGGTTCGATTCAATTGCCAATGATAATGATTCAGA
CTTGAGTTTGCACCACCCTTGTTTTACTAAATAGTTTG-TCCTTTTTCACTTGTGATTATGCACTAGAGATTTGCAAGGA
TGCATTGGATTCTTTTTATACTGATTTGATGCACTCTGACTTTCGAATGCGAACAAATGTGATCTTCAATTGGCATTGAT
GATTCAGACTTTAGTTTGCTAA-T---ACTGTAGTTGACATAACCTTGAGTGTTACTCCGCTATACTAAGTGGATTGAGC
TTTTTGTTATCCCGATGTCTTGAAAGCAAACTCTGTTCAAGGTTCCTTCTTTATCTTAGGCTCAGTACAGTGCTCATAAT
CTCAACTGAGTAGCAA-GCTTATAGCTGGAGTGTATTTCAGTTGACCAACCTGGCCGGAGGTGTGAACCAAACTGACAAC
AGAGATATCCAGTCTCTCATGCTTTATTCTTCA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>chr6D_1001
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------ATGCAACTAATACTCAATTTTCTAGGACTTGATACATCATGGTCTTCTTGTGCTTTGTTGTTTCGT
TGGTGTAGAATCCGTCAACTCTTGCCAAGAGGTTCTAGCTTCAAACCTGACTCTTCTAGTAGCTGGATCGTTGCACGCGT
GGAATTGATCGCAGGTACTTCTTCTAAAGATCACAATATCAGAATTTTATTACCCTATGTCCAGACCTGCATTTTTGTTA
TGGTGCAATCTAGGCTTTCTGAATGTTGTTATATAGTATATAATAAAAGAGTTGAACATATATGGGCACCAGATATTATT
AAATGTAGGTGCTGAACATGTACTATGCCCGCAATGTACAGTCAACGACCTATGATGCTCAGCATGCATGAATGCAGAGT
TCTAATAATGTACACTATTTGTTTGCTTTAATACATAATTTAGCTGCACGGACATTGTATTGATAAATGGTGAGACTGCT
CCAGTTACATATGTGCAGAGGCCATGGCGGCAGGTGGCCATGGCGCAGGTCGACAGGCAAAGAAGCCGCCCGAGGAGGCG
GCTCCCGCTGCACCATCGGAGAAGTGATCCGTCCATCAGATGACGAGGTTCCTCAGTTACACCTGCAGCTTAAAAGTTGT
TCCTTTCTGTTTTTGCAGATCTTAAATTCAATGTAGTACAGAACACCCACAAAATCATCACAATGATGAATTACTCTGAT
GTATCATCTGTTCATGAATTAACTGTCAAATGGGAAGAAATGTGATG------TTCAATTTCCATTGATAATGATTCAGA
CTTGAGTTTGCACCACCCTTCTGTTACTAAATAGTTTG-TCCTTTTTCACTTGTGATTATGCGCTAGAGATTTACAAGGA
TGCATTCCATTTTTTTATG-CTGATTTGATGCACTCTGACTTTGGAATGCAAACAAATGTGATCTTCAATTGGCATTGAT
GATTCAGACTTTAGTTTGCTAA-TAGTACTGTAACTGACATAACTTTGAG-GTTACTCCACTATACCAAGTGGATTGAGA
TTTTTGTTATCCTGATGTCTTGAAAGCAAACTCTGTTTAAGGTTCTTTCTTTATCTTAGGCTCAGTATAGTGCTCATAAT
CTCAATTGAGTAGCAAAGCTTATGGCTGGAGTGTATTTTAGTTGACCAACATGGCCGAAGGTGTGAACCAGACTGACAAC
AGAGATATCCAGTCTCTCATGCTTTATTCTTCA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>SNPs
---------------------------S----------------------------------------------------
--------------------------------------------------------------------SSSS--------
-------------------------------------S------------------------------------------
------------------------------------S------------------S---------------------S--
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
------------------------------------------------------------S---S---------------
---------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_318
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------GCTCGTGCAGTGATAGAGTGT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>reverse_2300
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CAAAGGGCGATAGGAAGCCA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
