>input_sequence_78701
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--------------------------------------------------------------------ATGGTGCAGACG
CTGCGCCACTGCGAGGCGCCCGCAGCCAAGGGCGAGCAGAAGTGGTGCCCCACGTCACTGGAGTCCATGATCGACATTGC
CACGTCCAGCCTTGGAACCAGCCACGTGAGGGCCATGTCCACCGTCGTCGGTAAGGAGGGAACACCAAGGCAGGAGTACA
CCCTGACCGACGTAAAATGCACC---GGCGCCGACCGTCTCCTGGTCTGCCACGCGGAGCCGTACGCGTACGCCGTGTTC
GCGTGCCACCTGCCTCGGGCAACTAGGGCCTACACATTGTCGATGGTCGGCGAGGACGGCACGGCGGTGGAGGCCGTCGC
GGTGTGCCACGCTGAAACGGCCGCCTGGAACC------------------------------------------------
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--CCAGGCACGTCGCATTCCAGGTGCTCAAGGTGAAGCCTGGCACCGTGCCGGTGTGCCACTTGGTGCCGCAGGACCACG
TCGTCTGGACCAGCGGCCGTGAGTTTGCCAGCTATTTGGATGTCTGA---------------------------------
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>chr6B_1_TraesCS6B01G017200
ATCTAAGGGCGGATTGGGCGACGCCGCCGCCGCCGTCTCACTCACGCCCAGCAGCCTATTTCTTGCGGGGACTCGATTTG
GGGAGAAAGACGGCTAGGTTTCCTGCGTGGTTGTGTTCCGGTGTGTGTAGGCTTCCTCTGGCTTGGCTGGGCCGTGCAAA
AAATTCAAACGGGCCGGTATAATTTGCTCGGTAGGCCCATTTACCGGGGGGCATCGATAATCGCGGTAACCGCTCGGTAA
ATGGAAATTTCGCTCGGTTACCAAATCCTTGGTTTGCCCCACTTCCCCTGCTCCCTTGATCTTGACCAGCTCCCTCCGTG
CAAGAATTGATCTGGGGCTAGCTGTATAAGTATCCATGTGTGCCTAGCTAGCTAGATGCAGCAAGGACATCAATCATCTC
CTCTGCTTCGTGCTCCTCATTGTTGCTCTCAATAATGGGTCGTCTCCTCTCCAGCCTTCTTGGCTTTCTACTGGTATGCC
CACCACTTTCTACAAGTTATCATCTTTATTCCATGGTTGTTATCACTAAATAATTTTGGGAGTACTCCAGTAGCTAGTAA
CAAGAAACATATTGCAGACTGCGTTCGTAAACAATGCAGCAGGGGCTTCCATTTTGACTCCGACTCCCGAGCAGTACTGG
AAGTCTGCTCTTCCAAACACTCCCATGCCAAGCTCCCTCTCTCGGCTGCTCCTGCACATCGTCGGTCATCTGCGGGCATG
GGAAGCACGGGGGCACGACGGTTGGTGAGAAATCCCATGTGTTTTTCAGTTCATACACCACAGTGGAGGGGCACT---TG
CACTTGCCCGACAACCCCAGCGCCGCGCTCTTCTTCTTGGAGAAGGACCTGCATATGCACGCGGGCCGGAAGAAGCTGAT
GAAG---CTCCATTTCATGGCCACCCCCGGCGCCGGTGACAAGTTTTTGCCACGAAGCGAGGCCGACGCCATCCCGTTCT
CCT----------------------TGGCCACTTCTCCCTGAAACAGGACTCCCAGGAGGCGGCGCAGATGGTGCAGACG
CTGCGCCACTGCGAGGCGCCCGCAGCCAAGGGCGAGCAGAAGTGGTGCCCCACGTCACTGGAGTCCATGATCGACATTGC
CACGTCCAGCCTTGGAACCAGCCACGTGAGGGCCATGTCCACCGTCGTCGGTAAGGAGGGAACACCAAGGCAGGAGTACA
CCCTGACCGACGTAAAATGCACC---GGCGCCGACCGTCTCCTGGTCTGCCACGCGGAGCCGTACGCGTACGCCGTGTTC
GCGTGCCACCTGCCTCGGGCAACTAGGGCCTACACATTGTCGATGGTCGGCGAGGACGGCACGGCGGTGGAGGCCGTCGC
GGTGTGCCACGCTGAAACGGCCGCCTGGAACC------------------------------------------------
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--CCAGGCACGTCGCATTCCAGGTGCTCAAGGTGAAGCCTGGCACCGTGCCGGTGTGCCACTTGGTGCCGCAGGACCACG
TCGTCTGGACCAGCGGCCGTGAGTTTGCCAGCTATTTGGATGTCTGAGTTGGTTACGTTCTAGCCTCTATGTGGTCTGTG
TACGCAGATACTGGTACTAGTAGCATGAGAAATGGCTTTCTACCCTCCATGAATACATGTACGGCATGTATTCGCTGTCC
GCCGTTTATTTAAATTTCGTGTTACATTTTCTGGTTTTGGTATGGTTTGTCTTTGTTTTTCAGTGCTCTATGTAACTTTC
GGTTTTCCCTTATTTCAAATTGTATCATCT----TGTTCCACAGCGTACCAGCAGATACTGGGTTGTTATGTCTTTTTAC
TGGATTCCGTTCTTGTTTCAGAGTAGTATCTTAATATACCGCAATGTTTCAGAGTAGTATCTTAATATTCCGTTCTTGTC
GACGTCGGTATGCCCAACCGAGCGAGAGTCCACACGCACGGAAGAAAAGACGAACCCTAGAAGCATGCAAATTCCTCGCC
TTTTGAACAAGTGGAAGAAGAGATTCTAGATTCCGTGGAAGCCATAGTCAAGGAGA-------GGTTCTAGGATATGAAG
GTATGACCATTTTTTCTATGGATTACGTAAAGGATGATCTAGACTTCACATTTCACTTGATAGATCTAGCCCCAATATTA
GAGATGATGTTAGATCTGCTTATATAGAGATGGGTCCAACTCAACCAATTTGCCGCAATTTTCCACCAGATAGAGATGAA
AGATGCTTTCGAGCAGTATGGTATAAGGATTTTGAATGGTTGGAATATAGTGTTTCTAAGAGAAAAACTTACTGTCATTA
TTGTATTTTTA--AAACATGACCGAATGGACGATAAATTTGGTTTGTATTATTTATATTGGTTTTGCATCAATTTTTTTG
TATAGTTTGCCCCACCTAAAAAATGTTTCGTCCTCCGCCACTG-AAACAGTGGCATAGCTAACATTTGTAGAGCTTGAAG
TAATGTTAGTATGATACGTAGCTGAAGAAGCAGGGAAGATACACATGAAGAGACTTGACCAAGAAATATCAGGAGTCCAG
ATCTATCTCAATTGTAAGGAA
>chr6B_272
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-------------------------------GTTTGCCCCACTTCCCCTGCTCCCTTGATATTGACCAGCTCCCTCCGTC
CATGAATTGATCTGGGGCTAGCTGTATAAATATCCATGTGTGCCTAGCTAGCTAGATGCAGCAAGGACATCAATCATCTC
CTCTGCTTCTTGCTCCTCATTGTTGCTCTCAATAATGGGTCGCCTCCTCTCCAGCCTCCTTGGCTTTCTACTGGTATGCC
CACCACTTTCTACAAGTTATCATCTTTATTCCACGGTTGTTATCACTAAATAATTTTGGGAGTACTCCAGTAGCTAGTAA
CAAGAAACATATTGCAGACTGCGTTCGTAAACAATGCAGCTGGGGCTTCCATTCTGACTCTGACTCCCGAGCAGTACTGG
AAGTCTGCTCTTCCAAACACTCCCATGCCAAGCTCCCTCTCTCGGCTGCT-CTGCACATCGTCGGTCATCTGCGGGCATG
GGAAGCACGGGGGCACGACGGTTGGTGAGAAATCCCATGTGTTTTTCAGTGTCTACACCACAGTGGAGGGGCACT---TG
CACTTGCCCGACGACCCCAGCGCCGCGCTCTTCTTCTTGGAGAAGGACCTGCATATGCACGCGGGCCGGAAGAAGCTGAT
GAAG---CTCCATTTCATGGCCACCCCCGGCGCCGGTGACAAGTTTTTGCCACGAAGCGAGGCCGACGCCATCCCGTTCT
CCTCTGACAAGGTCCCTGAGATCCTTGGCCACTTCTCCCTGAAACAGGACTCCCAGGAGGCGGCGCAGATGGCGCAGACG
CTGCGCCACTGCGAGGCGCCCGCAGCCGAGGGCGAGCACAAGTGGTGCCCCACGTCACTGGAGTCCATGATCGACATTGC
CACGTCCAGCCTTGGAACCAGCCACGTGAGGGCCATGTCCACCGTCGTCGGTAAGGAGGGAACACCAAGGCAGGACTACA
CCCTGACCGACGTAAAATGCACC---GGTGCCGACCGTCTCCTGGTCTGCCACGCGGAGCCGTACGCGTACGCCGTGTTC
GCGTGCCACCTGCCTCAGGCAACTAGGGCCTACACATTGTCGATGGTCGGCGAGGACGGCACGGCGGTGGAGGCGGTCGC
GGTGTGCCACGCTGACACGGCCGCCTGGAACC------------------------------------------------
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--CCAGGCACATCGCATTCCAGGTGCTCAAGGTGAAGCCTGGCACCGTGCCGGTGTGCCACTTGGTGCCGCAGGACCACG
TCGTCTGGACCAGCGGCCGTGAGTTTGCCAGCTATTCGGATGTGTGAGTTGGTTATGTTCTAGCCTCTCTGTGGTCTGTG
TACGCAGATAATGGTACTAGTAGCGTGAGAAATGGCTTTCTACCCTCCATGAATACATGT--------------------
-----TTATTTAGATTTCG----------TCTGGTTTTGGTAAGGTTTGTCTTTGTTTTTCAGTGCTCTATGTAACTTTC
GGTTTTCCCTTATTTCAAATTGGATCATCATGCATGTTCCACAGCGTACCGGCAGATACTGGGTTGTTATGTCTTTTTAC
TGGATTCCCTTCTTGTTTCAGAGTAGTATCTTAATATACCGCAATGTTTCAGAGTAGTATCTTAATATTCCGTTCTTGTC
TACGTCGGTACGCCCAGCCGAGCGAGAGTCCACACGCACGGAAGAAAAGACGAACCCTAGAAGCATGCAAATTCCTCGCC
TTTTGAACAAGTGGAAGAAGAGATTCTAGATTCCGTGGAAGCCATAGTCAAGGAGAATGTTGAGGTTCTAGGATATGAAG
GTATGACCATTTTTTCTATGGATTACATGAAGGATTATCTAGACTTCACATTTCACTTGATAGATCTAGCCCCAATATTA
GAGATGATGTTAGATCTGCTTATATAGAGATGGGTCCAACTCAACCAATTTGCCGCAATTTTCCGCCAGATAGAGATGAA
AGATGCTTTCGAGCAGTATGGTATAAGGATTTTGAATGGTTGGAATATAGTGTTTCTAAGAGAAAAACCTACTGTCATTA
TTGTATTTTTTTTAAACATGACCGAATGGACGATAAATTTGGTTTGTATTATTTATATTGGTTTTGCATCAATTTTTTTG
TATAGTTTGCCCCACCTAAAAAATGTTTCGTCCTCCGCCACTGCAAACAGTGGCATCGCTAACATTCGTAGAGCTTGAAG
TCATGTTAGTATGATACGTAGCTGAAGAAGCAGGGAAGATACACATGAAGAGACTTGACCAAGAAATATCAGGAGTCCAG
ATCTATCTCAATTGCAAGGAA
>chr7A_618
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---------------------------------------------------------CTCCGACTCCGGAGCAGTACTGG
AAGTCTGCTCTTCCCAACACTCCCATGCCAAGCTCCCTCTCTCAGCTCCTGAACACC--------TCGTCGGCGAGCATC
GGAAGCCCCGGGGAATCGCGGTCGGCATTTGGGCGTTCCACTATTTCGACCATTAAGACGCAACCGAGACGCACTTGCTG
CACATGGCCGACGATCCCGCCGCCACGCTCTTCTTCCTGGAGAAGGACCTGCGGATGCACACCAGCCGGAGGAAGCTGAC
CAAGGTCCTCCATTTCATGGCCACCTCGGGCGCTGGAGAGCGGTTTTTACCGCGAAGCGAGGCCGGCGCCATCCCGTTCT
CCTCGGGCGAGGTCCCTGAGATCCTCAGCCGCTTCTCCGTGATGCCGGACTCGGTGGAGGCGGCGGAGATGGCGCGGACG
CTGCACGTCTGCGAGGCTCCGGCTGCCGAGGGCGAGAAGAAGTGGTGCGCCACGTCGCTGGAGTCCATGGTCGACTTCGC
CACGTCCAGCCTCGGGACCAGCCACGTGAGGGCCGTGTCCACCGTCGTCGGCAAGGAGGGAACGCCGAGTCAGGAGTACA
CCCTGACCGGCGTGAAGCGCGCC---GGTACTGACCAGCTCGTGGTTTGCCACGCGGAGCCGTACGCGTACGCCGTGTTC
GCGTGCCACCTGACGCGGGCGACGAGAGCCTACACATTGTCGATGGTCGGCGAGGACGGCACGGCGGTGGAGGCCGTCGC
GGTGTGCCACGCCGACACGGCCGGCTGGAACCTGTGTTTTGGCTTTCGGTTTGCAATTTTTTTCGCTCATGAGCGAGATG
GACGAAATTCGGATAATTCAAAAATTTCGGTAAAATCTCGGACGAAATTACAAAATCAAAGTTTGAATTTTAAATGAAAT
TTGACCGAAATCTGGTCGAAATTCGGCCGGAATTTTTGAAAATAAGCAGAACAGACACTGCATCAGTCCAACACATCAGA
ATAAGCTCCAAGAGAAAACGATTGAAACATGTACAGAGATTAGCCGATGGATTCAGCTGCGGCCCAACAACACCCGTGTG
TGCTGCAGAGTTGAGGAGGATTCGATGGATTCAGCCGCTGCCGGCAGAGGTCGGCAGCAGGGGCCGGGCCGTCGGGAAGC
CGTGGAAGGGGCAGGAGCGGGAGGCTTGATCTGGTAGGCAGGCGGCGACGAGTGGCGGAGCCGCGTCTGGGCTGAGCGGC
GCCGCCGCAAACACGGGAGGAGCAGCGAAACGTCAGTTGTGTAGGGTTAGGGCATTCAGTTCGATGGGTCCAACTTACGC
TGACCGTGGGAAGGCTTCCGACGTTGGATTGGGCCAAAAGAAAATTCAAACTGGGCCGAAATATTAGGCCGGCACAGATA
TTTACCGGGCCCTAGCGAGATGGACGAAATTCGGCCGAAAATTGATTTTTTTCGGCCGAAAATCAAAACTGTGGCTGGAA
CCCGAGGCACATCGTGTTCCAGGTGCTCAATGTAAAGCCCGGCACGGTGCCGGTGTGCCACTTGGTGCCGCAGGACCACG
TCGTCTGGACCCGCAGCCTTACGTTTGCTAGCTATTTGTATGTCTGAGTCTGAGTT------------------------
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>chr3B_802
TGCA----------------------------------------------------------------------------
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--------CGACGACCCCAGCGCCGCGCTCTTCTTCCTGGAGAAGGATCTGCACGCCGG------------GAAGAAGAT
GAAC---GTCCATTTCATGGCCACCCCAGGCGCCGGAGAGAAGTTCCTGCCGCGGAGCGAGGCCGACACCATTCCGTTCT
CCTCCGAGAAGGTCCCTGAGATCCTCAGCCGCTTCTCCGTGGCGCCGGACTCCGTGGAGGCGGCGGAGATGAAGCAGACG
CTGCGCGAGTGCGAGGCGGCGGCGGACAATGGGGAGAAGAAGTCGTGCGCCACGTCGCTGGAGTCCATGGTGGACTTCGC
CACGTCCAGCCTCGGGACCAGCCACGTGAGGGCCGTCTCCACGGTGGTCGGGAAGGAGGGGTCGCCGGAGCAGGAGTACA
CCATGACCGGCGTGAAGCGCGCGGCGGGGGCCGACCAGCTCGTGGCCTGCCACGCGGAGCCGTACGCGTACGCCGTGTTC
GCGTGCCACCTGACGCAGGCGACGAGGGCGTACACGGTGTCGATGGTCGGCAAGGACGGCACGGCGGTGGAGGCCGTCGC
CGTGTGCCACGCCGACACGGCCGGCTGGAACC------------------------------------------------
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--CGAGGCACGTGGCGTTCCAGGTGCTCAAGGTGAAGCCCGGCGCGGCGCCGGTCTGCCACTTCCTGCCGCAGGACCACG
TCGTCTGGACCCGCAGC---------------------------------------------------------------
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>chr3A_802
TGCA----------------------------------------------------------------------------
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--------CGACGACCCCAGCGCCGCGCTCTTCTTCCTGGAGAAGGATCTGCACGCCGG------------GAAGAAGAT
GAAG---GTCCATTTCATGGCCACCCCGGGCGCCGGCGAGAAGTTCCTGCCGAGAAGCGAGGCCGACGCCATCCCGTTCT
CGTCGGAGAAGGTCCCCGAGATCCTCAGCCGCTTCTCGGTGGCGCCGGACTCCGCCGAGGCGGCGGAGATGAAGCAGACG
CTGCGCGAGTGCGAGGCGACGGCAGCCAAGGGGGAGAAGAAGTCGTGCGCCACGTCGCTGGAGTCCATGGTGGACTTCGC
CACGTCCAGCCTGGGGACCAGCCACGTGAGGGCCGCCTCCACGGTGGTCGGGAAGGAGGGGTCGCCGGAGCAGGAGTACA
CCATGGCCGGCGTGAGGCGCGCGGCGGGGGCCGATCAGCTGGTGGCCTGCCACGCGGAGCCGTACGCGTACGCCGTGTTC
GCGTGCCACCTGACGCGGGCGACGAGGGCGTACACGGTGTCGATGGTCGGCAAGGACGGCACGGCGGTGGAGGCCGTGGC
GGTGTGCCACGCCAACACGGCCGGCTGGAACC------------------------------------------------
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--CGAGGCACGTCGCGTTCCAGGTGCTCAAGGTGAAGCCCGGCGGGGCGCCGGTGTGCCACTTCCTGCCGCAGGACCACG
TCGTCTGGACCCGCAGC---------------------------------------------------------------
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>chr3D_802
TGCA----------------------------------------------------------------------------
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--------CGACGACCCCAGCGCCGCGCTCTTCTTCCTGGAGAAGGATCTGCACGCCGG------------GAAGAAGAT
GAAC---GTCCATTTCATGGCCACCCCGGGCGCCGGCGAGAAGTTCCTGCCGCGGAGCGAGGCCGACGCCATCCCGTTCT
CCTCGGAGAAGGCCCCCGAGATCCTCAGCCGCTTCTCCGTGGCGCCGGACTCCGCCGAGGCCGCGGAGATGAAGCAGACG
CTGCGCGAGTGCGAGGCGACGGCGGCCAAGGGGGAGAAGAAGTCGTGCGCCACGTCGCTGGAGTCCATGGTGGACTTCGC
CACGTCCAGCCTCGGGACCAGCCACGTGAGGGCCGCCTCCACGGTGGTCGGAAAGGAGGGGTCGCCGGAGCAGGAGTACA
CCATGGCCGGCGTGAGGCGCGCGGCGGGGGCCGACCAGCTCGTGGCCTGCCACGCGGAGCCGTACGCGTACGCCGTGTTC
GCGTGCCACCTGACGCAGGCGACGAGGGCGTACACGGTGTCCATGGTCGGCAAGGACGGCACGGCGGTGGAGGCCGTGGC
GGTGTGCCACGCCGACACGGCCGGCTGGAACC------------------------------------------------
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--CGAGGCACGTGGCGTTCCAGGTGCTCAAGGTGAAGCCCGGCGGGGCGCCGGTGTGCCACTTCCTGCCGCAGGACCACG
TCGTCTGGACCCGCAGC---------------------------------------------------------------
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>chr7D_868
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----------------------------------------------------------------------AGAAGCTGAC
CAAGGTCCTCCATTTCATGGCCACCTCGGGTGCCGGAGAGAGGTTTCTACCGCGAAGCGAGGCCGACGCCATCCCGTTCT
CCTTCGGCGAGGTCCCTCAGATCCTCAGCCGCTTCTCCGTGAAGCCGGACTCCCAGGAGGCGGCGGAGATGGCGCGGACG
CTGCACGTCTGCGAGGCGCCGGCGGCCGAGGGCGAGAAGAGGTGGTGCGCCACGTCGCTAGAGTCGATGGTGGACTTCAC
CACGTCCAGCCTCGGGACCAGCAACGTGAGGGCCGTGTCCACCGTCGTCGGTATGGAGGGAACGCCGAGGCAGGAGTACA
CCCTGACCGGCGTGAAGCGCGCC---GGCGACGACCAGCTCGTGGTCTGCCACGCGGAGCCGTACGCGTACGCCGTGTTC
GCGTGCCACCTGACGCAGGCGACGAGGGCCAACACATTGTCGATGGTCGGCGAGGATGGCACGGCGGTGGAGGCAGTCGC
GGTGTGCCACGCCGACACGGCCGGCTGGAACC------------------------------------------------
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--CGAGGCACGTCGCGTTCGAGGTGCTCAAGGTGCAACCCGGCAAGGTGCCAGTGTGCCACTTGGTGCCGCAGGACCACG
TCGTCTGGACCCGCAGCCTGACGTTCGCTACCTATTTGGATGTCTGAGTCGGTTTCATTCTAGCCTC-------------
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>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------S------------------S
--S--------------------------S--------------------------------------------------
---------S--------------------------------S--------------S----------------------
---------------------------------S----------------------------------------------
----------------------------------------S------------S--------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------SSS---------------------------
------------S-------------------------------------------------------------------
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------------------------------------------------------------------------S-------
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---------------S----------------------------------------------------------------
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--------------------------------------------------------------------S-----------
----------S-------------S-----------------------------------SSSSSSSSSSSSSSSSSSSS
SSSSS-------S------SSSSSSSSSS-------------S-------------------------------------
----------------------S------S--------------------S-----------------------------
--------S-----------------------------------------------------------------------
S---------S-----S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-S------S--------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------S-----------
----------S---------------------------------------------------------------------
--------------------------------------------------------S---------S-------------
-S------------------------------------------------------------------------------
--------------S------
>forward_135
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-----------------------------------TTCCGGTGTGTGTAGGCTTC-------------------------
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>reverse_2301
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------------------------------------------------------------ACGGCATGTATTCGCTGTCC
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