>input_sequence_78692
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------------------------------------------------------------------------------AT
GGATGCAGCTG-----AGGCGCGCTGGGCCTGGCACAGATATGGCCCAAGCCGGCAAGGGCCACGGTCAACGGGGCGACC
GACTGTTCTTGCGGTCGTCCAGGCGATCAAAGCAGAGGGCGGGTCGTCCTTGTTCATTCCTGAGAAAGAGAGACGCCGAT
TGAGAGAGAGGAAACCAG-----------AGGATGGAGAGAAGGGGTCGGCGAGCTACGTGGTCCGGCGACGCGGGAAGC
AGTGGGTCGGCGGGGAGGCGAGCGGATCCCGACGGTGGCGCGCCGAACGGAGGCTAATGGAGGTGGTTCCAGCGATGCCT
TGTGGCTGGCGTGGCCACGGCAGCAGGGGCTTGGCGGCAGCGAACGAGCGCGAGGTAGAGGAGGCAGGCATGGTGTCGCG
CTCTGTTGAAGCAGGGGAACGAGCGGGCGATGCGGTGCTC---------------GGGTGCCATGGTCTACTGCTGCTCC
TGCATGAAGAACACACGGAAAGGGAGAGAGTTTAG---------------------------------------------
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>chr5A_1_TraesCS5A01G078700
TGATATAACAAGTGGTAGGTAGCGCGACATAGCGATAGAGCGAA-CAACTAGCA-AGCAAAGATAGAAGTGATATCGAGG
GTAT-GGTCATCTTGCCTAAGATCCCGCAAGGAAGAAGAACGAGTCCATGAAGAAGACAAATGGACGTAGTCGAACGAAT
CCTCACAACTCCGGACCAAAACCGAAGCTAACGAGAGAAGCAACCCGGAAAGAATCAAGCAACATAGTAAACAACCATCA
CATAAACATGTCATGATGCACAACCAAGTATGATGCATGTCCGGTTTAAAGAGTCATGGCATGGCAA-AGTGCAACAAAC
AATACTACAAC-TAAGTGGAGCTCAATATGCAACGAGTTGCATATTGACGAAACACCACATT-CAA-TTATTTAATTCTC
TCTCGGTTATG-TACCCAACAATATTAAATGTTGTTAAACATGAC--AAGAGGTGAAACATAAGTAAACTA-ACTATTTA
GGCAAGTTTAAGTGAGGCCGAAAACTACAAGCAACAATTCTGGAAAATCCTCATATGCATTTTAT-GGA-TTTGGTACTG
TTCTGCCCTAAACCATATTTTAGAGTTGTT-AAACATGCAAAGTAATG-CCACCATGTTAAACTATGCATTTTTCTACCC
CAGTTGCATATAAAGTTTATTAAATTCGGAGCTACGGTTAAGTAGTTATGAAATAAATCATTTTAACATGGCATTTAAGC
AAATTAAAGCAAAG--------AA-TTTTTTTAACATGGATGAAAGCAGCATATTATGAAACTAGACAAAATTCTAAGCA
TTTTACATATATAAGTTATTTACATATGATGCATGGTTAATTAGTTATTAAATGCATGAAAGCTAGGG-GGTTTT-CTGT
AAAATAGTAAACTCTGGAAA-T--TAGCTAAAGCGTCCAGACC--TG-AA-AAAACAAC-GATACAGGCTGAATCTGGCA
GGTTGTTCCAAC--AGG-AAAAA-AACAGAGGAATGGCACTGGGGTGTGGCCTCAGCCAGGGGGCCTTAGCCCGGTCGAT
GGATGCAGCTG-----AGGCGCGCTGGGCCTGGCACAGATATGGCCCAAGCCGGCAAGGGCCACGGTCAACGGGGCGACC
GACTGTTCTTGCGGTCGTCCAGGCGATCAAAGCAGAGGGCGGGTCGTCCTTGTTCATTCCTGAGAAAGAGAGACGCCGAT
TGAGAGAGAGGAAACCAG-----------AGGATGGAGAGAAGGGGTCGGCGAGCTACGTGGTCCGGCGACGCGGGAAGC
AGTGGGTCGGCGGGGAGGCGAGCGGATCCCGACGGTGGCGCGCCGAACGGAGGCTAATGGAGGTGGTTCCAGCGATGCCT
TGTGGCTGGCGTGGCCACGGCAGCAGGGGCTTGGCGGCAGCGAACGAGCGCGAGGTAGAGGAGGCAGGCATGGTGTCGCG
CTCTGTTGAAGCAGGGGAACGAGCGGGCGATGCGGTGCTC---------------GGGTGCCATGGTCTACTGCTGCTCC
TGCATGAAGAACACACGGAAAGGGAGAGAGTTTAGCAATGGGAGAGAGAGG-GATGGCGAGGGGGAGGCAAGGGACGGTG
AGGCTTGGCCTGCTCGTGGTCGTGGTCCCTGGAGGGTGCATTGGATCGGGAGGAGCGGTGAGCACGCGGGAGCGAGAGGA
TTCGCGGGGCCTCTATTTGCAGGAGGCTGGTAGCAAGGCTTCGGGCATGAACGACGCCGGGGATGGGGATGGCGCGGGCA
TGGCGAGAGACGGCCGGATCTACGGGCGCCTCCAGAGTTGGTGAGGGAGGTGGGGGGATTGGGTTGGCTGACGCAAAAAT
TGTGGGAGGTGGTCGGACGCCATGAGCAGGGGGAGCCTTGCTCCAGTCGAGGCCGAGGAGAAATGAGGAGGTGGCTGCGG
GATTGGATGGATTGGTTGGTTTGGTGGGGAATCGAGGAGGGA---CAGGGGAGGCGCTGGTTGGTTCGCTGGTGATCCCG
AGGGTAACCAGAGAGAGTGGTGGCGGGGAGGAGGATCCCTAGAAAATAGGGTTT-GGCTTGATTTTGGGTAGGGGTTGAT
CTATATATAGGGACAAAAGGATTAGGTTTCGACCCTCCGATCAAAATTGGACGGTCTCAGATAAATAGGTTAGGAGAGTC
CAACG-AGAAACCGATGATGATTTAGGGATGTTTGGGGACGATCCGGACCCATTGGTCACGACAGTCCGGTTCGGGTTCG
GGGAAGTTTCGGACACGGGAGAGGGGTCGATGTACTGTGCAAAGAGGGGTCAGGCGGATGGGGTCTA--GTGTGCTTGGA
TTGAGAATGGTCATCGAAGAAAAATGGTCTCACAACATGCCACGGAGACGCGGAGAGAGGCGGCAGCTACGAACGGTTAC
GAGTTTTATGAAAACATGCGAATGCAAAA-GCATGATGACATGATGAATGCGACA------AACAAGAAAAAA--CATGA
CAATGACGGCGAATAACTGAACGACACCTGGTGCAACAGTCTCGGGGCGTTACAACACTCCACCACTACAAGAGGATCTC
ATCCCGAGATTT
>chr5A_1
TGATATAACAAGTGGTAGGTAGCGCGACATAGCGATAGAGCAAA-CAACTAGCA-AGCAAAGATAGAAGTGATATCGAGG
GTAT-GGTCATCTTGCCTGAGATCCCGTAAGGAAGAAGAACGAGTCCGTGAAGAAGACAAATGGACGTAGTCGAACGAAT
CCTCACAACTCCGGAACGAAACCGAAACTAATGAGAGAAGCAACCCGGAAAGAAGCAAGCAACATAGTAAACAACCATCA
CATAAACATGGCATGATGCACAACCAAGTATGATGCATGTCCAGTTTAAAGACTCATGGCATGGCAA-AGTGCAACAAAC
AATACTACAAATTAAGTGGAGCTCAATATGCAACGAGTTGCATATTGACAAAACACCACATT-CAA-TTATTTAGTTCTC
TCTCGGTTATG-TACACAACAATATTAAATGTTGTTAAACATGGA--AAGAGGTGAAACATAAGTAAACTA-ACTATTTA
GGCAAGTTTAAATGAGGTCGGAAACTACAAGCAACAATTCCGGAAAACCCTCATATGCAATTTAT-GGA-TTTGGTACTA
TTCTGCCCTAAACCATATTTTAGAGTTGTT-AAACATGCATAGTAATG-CCACCATGTTAAACTATGCATTTTTCTACCC
CAATTGCATATAAAGTTTATTAAATTCGGAGCTACGGTTAAATAGTTATAAAATAAATCATTTTAACATGGCATTTAAGC
AAATTAAAGCAAACAACATTTTAA-TTTTTTTAACATGGATGAAAGTAGCATATTATGAAAGTAGAAAAAATTGTAAGCA
TTTTACATATATAAGTTATTTACATATGATGCACGGTTAATTAGTTATTAAATGCATGAAAGCTAGG---TTTTT-TTGT
AAAACAGTAAACTCTGGAAA-T--TAGCTAAAGCGTCCAGACC--TG-AAGAAAAAAAC-GATGCGGGCCGAATCTAGTA
GGCTGGTCCAAC--AGG-AAGAA-AATAGAGGAAGAGCGCTGGGGTGTGGCCTCACCCAGTGGGCCTTGGCCCGGTCGAT
GGATGCTGCCG-----AGGCGCGCTGGGCCTGGCGCAGATATGGCCCAAGCGGGCGAGGGCCGCAGTCAACGGGGCGACC
AGCTGCGCTTGCGGTCGTCCAGGCGATCGAAGCAGAGGGCGGGTCATTCTTGTTCGTCCCTGAGACAGAGAGACACCGAT
TGAGAGAGAGGAAACCAGAGGAGGACCGG-GGACGGAGAGAAGGGGTCGTCGACCTGCGGGGTCCGGCGACGCGGGAAGC
AGCGGATCGGCGGGGAGGTGAGCGGATCCTGGCGGCGGCGCGCCGAAAGGAGGCTGATAGAGGTGGTTCCGGCGATGGCT
TGCGGTTGGCGTTGCCATGGCAGC--------------------------------AGAGGAGGCAGGCATGGCGCCATG
CTTTGTTGAAGCAGGCGAACGAGCGGGTGACGCGGTGCTCCGGCAAGGAGAAGGAGGGCGCCATGGTCTATTGCTGCTCC
TGCGTGAAGAACACAGGGAAAGGGAGATAGTTTAGCAACGGGAGATAGAGGGGATGGTGAGGGGGAGGCAAGGGACAGCG
AGGCTTGGCCTGGTCGTGGTCGTGGACGCCGGAGGGCGCGTTGGATCGGGAGGAGTGGCGAGCACGAGGGAGCGAGAGGA
TTCGCGGGGCCTCTGCTTGCGGGAGGCTGGGAGCGAGGCTTCAAGCGTGAACGACACCGGGGATGGGGATGGCGCGTGCA
TGGCGAGAGACGGCCGGATCCGTGGGCGTGTCGAGAGTCGGTGAGGGAGGTGGAGGGATTGGGTTGGCCGGCACGAAAAT
TGCGGGAGGTGGTCGGACGCCATGAGCAGGGGGAGCCTTGCTCCGGTCGAGGCAGAGGAGAAACGAGGAGGTGGTTGCAG
GATTGGATGGATCGGTTGGTTTGGTGGGGAATCGAGGAGGGA---CAGGGGAGGCGCTGGTTGGTTTGCTGGTGATCCCG
AGGGGAACTAGAGAGAGTGGCGATGGGGAGGAGGATCCCTAGAAAATAGGGTTTTGGCTTGA-TTTGGGCAGGGGTTGAT
CTATATATAGGGACAAAAGGATTAGGTTTGGATCCTCCGATCAAAATCGGACGGTCTTAGATTAATAGGTTAGGAGAGTC
CAACG-AGAATACGATGATGATTTGGGGATGTTTGGGGACGATCCGGATCCATTGGTAACGGCAGTCC------GGTTCG
GGAAAGTTTCGGACACGGGAGAGGGGTCGATGCACTGTGCAAAGAGGGGCCTGGCGGACGAGGTCTA--GTGTGGTTGGA
TTGAGAATGGTCATCGAAGAAAAACGGTCTGACAACATGCCACGGAGACACGGAGAAAGGCAGCAACTACGAACGATTAC
GAGTTTTATGAAAACATGCGAATGCAAAA-GCATGATGACATGATGAATGCGACA------AACAAGAAAAAAAACATGA
CAATGACGACAAATAACTGAACGACACCTGGCGCAACAGTCTCGGGGCGTTACAACA-----------------------
------------
>chr1D_1
TGATATAGCAAGTGGTAGGTAGCGCGGCATAGCAATAGAACGAA-CAACTAGCA-AGCAAAGATAGAAGTGATATCGAGG
GTAT-GGTCATCTTGCCTGAAATCCCGCTAGGAAGAAGAACGAGTCCATGAAGAAGACAAACGGATGTAGTCGAACGAAT
CCTCACAACTCCGGAACGAAACCAAAGCTAACGAGAGAAGCAAACCGGAAAGAAGCAAATAACATGGTAAACACACAAG-
CATAAACATGGCATGATGCACAATCAAGTATGATGCATGTCCGGTTTAAGTAGGCATGGCATGGCAA-AGTGC-ACAAAC
AATACTACAAATTAAGTGGAGCTCAATATGCAACGAGTTGCATATTGACGAAACACCACAT--CAA-TTATTTAGTTCTC
TCTCATTTATG-TACCCAACAATATTAAATGTTGTTAAACATGGC--AAGGGGTGAAGCATATGAAAACTA-CCTATTTA
GGCAAGTTTAAATGAGGCCGGAA-TAACAAACAACAATTCCGGAAAATCCTCATATGCATATTTCGA-A-TTTGCTACTG
TTCTGCCCTAAACCATATTTTAGTGTTGTT-ATAAA-GCAAAATAAAGTGCACCGTGTTAATCTATGCATTTTTCTACCC
CATTTACATATAAAGTTCATTAAATTCAGAGCTACGGTTAATTACTTATGAAATAAATCATTTTAACATGGCATTTATGA
AAATTAAAGCAAACAGCAAGTTAAACATTTTAAACATGGATGAAAGTTGCATATTATGAAACTAGATGAAATTCTAAGCA
CTTTACATATATGAAGTTTTTACATATGATGCATGGTTAATTAGTTATTACATGCATGAACAT-GAGG-ATTTTT-CGGT
AAAACTGCACTCTCTGGATAAA--TAGCAAAT-CGTCTAGAAC--T---G-GAAAAAAC-GATGCGGGCTGAATCTGGCA
GGCGGGCCCAAC--AGG-AAAAATAACAGAGGAAGGGCGCTGGGGTGTGGCCTCACCCAGTGGGCCTTGGCCCGGTCGAT
GCATGCGGCTG-----AGGCGCGCTGGGCCTGACGCAGATATGGTACAAGCGGGCGATGGCCGCGGTCAACGGGGCGACC
GGCTGCG--------CGTCCAGGTGATCGAAGCAGAGGGCGGGTCGTCCTTGTTCGTCCCTGAGACAGAGAGACAGCGAT
TGAGAGAGGGGAAAACAGAGGAGGAGCGGAGGACGGAGAGAAGGGGTCGGTGACCTGCGGGGTCCGGCGGCACGGGAAGC
AGTGGGTCGGCGAGCAGGC-------------------------------------------------------------
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------------
>chr1D_1
TGATATAGCAAGTGGTAGGTAGCGCGGCATAGCAATAGAACGAA-CAACTAGCA-AGCAAAGATAGAAGTGATATCGAGG
GTAT-GGTCATCTTGCCTGAAATCCCGCTAGGAAGAAGAACGAGTCCATGAAGAAGACAAACGGATGTAGTCGAACGAAT
CCTCACAACTCCGGAATGAAACCGAAGCTAACGAGAGAAGCAAACCGGAAAGAAGCAAACAACATGGTAAACACACAAG-
CATAAACATGGCATGATGCACAATCAAGTATGATGCATGTCCGGTTTAAGTAGGCATGGCATGGCAA-AGTGC-ACAAAC
AATACTACAAATTAAGTGGAGCTCAATATGCAACGAGTTGCATATTGACGAAACACCACAT--CAA-TTATTTAGTTCTC
TCTCATTTATG-TACCCAACAATATTAAATGTTGTTAAACATGGC--AAGGGGTGAAGCATATGAAAACTA-CCTATTTA
GGCAAGTTCAAATGAGGCTGG-AATAACAAACAACAATTCCGGAAAATCCTCATATGCATATATCGA-A-TTTGCTACTA
TTCTGCCCTAAACCATATTTTAATGTTGTT-AAAAA-GCAAAATAAACTGCACCATGTTAATCTATGCATTTTT-TACCC
CATTTACATATAAAGTTTATTAAATTCAGAGCAACGGCTAATTAGTAATGAAATAAATCATTTTAACATGGCATTTATGC
AAATTAAAGCAAACAGCAAGTTAAACATTTTAAACATGGATGAAAGTTGCATATTATGAAACTAGATGAAATTCTAAGCA
CTTTACATATATGAAGTTTTTACATATGATGCATGGTTAATTAGTTATTACATGCATGAACAT-GAGG-ATTTTT-CGGT
AAAACTGCACTCTCTGGATAAA--TAGCAAAT-CGTCTAGAAC--T---G-GAAAAAAC-GATGCAGGCTGAATCTGGCA
GGCTGGCCCAAC--AGGAAAAAATAACAGAGGAAGGGCGTTGGGGTGTGGCCTCACCCAGTGGGCCTTGGCCCGGTCGAT
GCATGCGGCTG-----AGGCGCGCTGGGCCTGACGCAGATATGGCACAAGCGGGCGAGGGCCGCGGTCAACGGGGCGACC
GGCTGCG--------CGTCCAGGCGATCGAAGCAGAGGGTGGGTCGTCCTTGTTCGTCCCTGAGACACAGAGACAGCGAT
TGAGAGAGAGGAAAACAGAGGAGGAGCGGAGGACGGAGAGAAGGGGTCGGTGACCTGTGGGGTCCGGCGGCGCGGGAAGC
AGCGGGTCGGC---------------------------------------------------------------------
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------------
>chr1D_1
TGATATAGCAAGTGGTAGGTAGCACGACATAGCAATAGAGCGAA-CAACTAGCA-AGCAAAGATAGAAGTGATTTCGAGG
GTAT-GGTCATCTTGCCTGAGATCCCGCTAGGAAGAAGAACGAGTCCATGAAGAAGACAAAAGGACGTAGTCGAATGAAT
CCTCACAACTCTGGAACGAAACCGAAGCTAACGAGAGAAGCAACCCGGAAAGAAGCAAGCAACATAGTAAACAACCATCA
CATAAATATGGCATGATGCGCAACCAAGTATGATGCATGTCCGGTTTAAAGAGGCATGGCATGGCAA-AGTGC-ACAAAC
AATACTACAAGTTAAGTGGAGCACAATATGCAACGAGTTGCATATTGATGAAACACCACATTTCAA-ACATTTAGTTCAC
TCTCGTTTATG-TACCCAACAATATTAAATGTTGTTAAACATGGC--AAGAGGTGAAGCATAATTAAACTA-ACTATTCA
GGCAAGTTTAAATGAGGCCGGAAATAATAAACAACAATTCCGAAAAATCCTCATGTGCATATTTT-G-A-TTTGGTACTG
TTCTGCCCTAAACACAATTTTAATGTTGTT-AA-CG-GCAAAATAAAGTGTACCAAGTTAAACTATGCATTTCTCTACCC
CATTTACATATAAAGTTTATTAAATTTGGAGCTACGGTTATTTAGTTATGAAATAAAACATTTTAGCATGGCATTTAAGC
AAATTAATGCAAACAGCAATTTAAACATTTTAAACATGGATGAAAGTAGCATATTATGAAACTAGACAAAATTCTAAGCA
TTTTACATGTATAAATTATTTACATATGATGCACAGTTCTGGAGTTATTAAATGCATGATCAT-GAGG-GTTTTT-CTGC
AAAACTGCCAACTCTGGATAAT--TAGCTAAAT-TCGCAGACG--CT-GA-AAAAACA----------------------
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>chr7D_1
TGATATAGCAAGTGGTAGGTAGCGCGGCAGAGCAATAGAACGAA-CTACTAGCA-ATCAAAGATAGAAGTGATATCGAGG
GTAT-GGTCATCTTGCCTGAAATCCCGCTAGGAAGAAGAACGAGTCCATGAAGAAGACAAACGGATGTAGTCAAACGAAT
CCTCACAACTCTGGAACGAAACCGAAGCTAACGAGAGAAGCAAACCGGAAAGAAGCAAACAACATGGTAAACACACAAG-
CATAAACATGGCATGATGCATAATCAAGTATGACGCATGTCCGGTTTAAGTAGGCATGGCATGGCAA-AGTGC-ACAAAC
AATACTACAAATTAAGTGGAGCTCAATATGCAACGAGTTGCATATTGACGAAACACCACAT--CAA-TTATTTAGTTCTC
TCTCATTTATG-TACCCAACAATATTAAATGTTGTTAAACATGGC--AAGCGGTGAAGCATATGAAAACTA-CCTATTTA
GGCAAGTTTAAATGAGGCCGGAA-TAACAAACAACAATTCCGGAAAATCCACATATG-ATATTTCGA-A-TTTGCTACTG
TTCTGCCCTAAACCATCTTTTAATGTTGTTAAA-AA-GCAAAATAAAGTGCACCATGCTAATCTATGCATTTTTATACCC
CATTTACATATGAAGTTTATTAAATTCAGAGCTACGGTTAATTAGTTATGAAATAAATCATCTTAACATGGCATTTATGC
AAATTAAAGAAAACAGAAAGTTAAACATTTTAAACATGGATGAAAGTTGCATATTATGAAACTAGATGAAATTCTAAGCA
CTTTAGATATATGAAGTTTTTACATATGATGCATGGTTAATTAGTTAGTCATGGC-TGAACAT-GAGG-ATTTTT-CGGT
AAAACTGCACTCTCTGGATAAA--TAGCAAAT-CGTCTAGAAC--T---G-GAAAAAAATGATGCGGGCTGAATCTGGCA
GGCTGGCCCAAC--AGGAAAAAATAACAGAGGAAGAGCGCTGGGGTGTGGCCTCACCCAGTGGGCCTTGGCCCGGTCGAT
GCATGCGGCTG-----AGGCGCGCTGGGCCTGACGCAGATATGGCACAAGCGGGCGAGGGCCGCGGTCAACGGGGCGACC
GGCTGCG--------CGTCCAGGTGATCGAAGCAGAGGGCGGGTCGTCCTTGTTCGTCCCTGAGACAGAGGGACAGCGAT
TGAGAGAGAGGAAAACAGAGGAGGAGCGCAGGACGGAGAGAAGGGGTCGGTGACCTGCGGGGTCCGGTGGCGCGGGAAGC
AGCGGGTCGGCGAGCAGGC-------------------------------------------------------------
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------------
>chr3D_1
TGATATAGCAAGTGGTAGGTAGCGCGGCATAGCAATAGAGCGAA-CAACTAGCA-AGCAAGGATAGAAGTGATTTCGAGG
GTAT-GGTCATCTTGCCTGAGATCCCGCAAGGAAGAAGAACGAGTCCATGAAGAAGACAAATGGATGTAGTCGAACGAAT
CCTCACAACTCCGGAACGAAACCGAAGCTAACGAGAGAAGCAAACCGGAAAGAAGCAAACAACATGGTAAACAACCATCA
CAGAAACATGGCATGATGCACAATCAAGTATGATGCATGTCCGGTTTAATGATTCATGGCATGGCAA-A-TGCAACAAAC
AACACTACAAATTAAGTGGAGCTCAATATGCAATGAGTTGCATATTGACGAAACACCACAT--CAA-TCATTTAGTTCTC
TCTCGTTTATG-TACCCAACAATATTAAATGTTATTAAACATGGC--AAGAGGTGAAGCATAGTAAGACTA-TCTATCTG
GGCAAGTTTAAATGAGTCCGGAA-CAATAAACAACAATTCCGGTAAATCCCCATATGCATATTTCAA-A-TTTAGTACTG
TTCTGCCCTAAACTATATTTTAGAGTTGTT-AAACATGCAAAGTAATG-GCACCATGTTAAACTATGCATTTTTCCACCC
CATTTACATATAAAGTTTATTAAATTTGGAGCTACGGTTAATTAGTTATGAAATAAATCATTTTAACATGGCATTTATGG
AAAATTAAACAAACAACA--------AGTTTAAACATGGGTGAGAGTTGCAAATTATTAATCTACACAAAATTCTAAGCA
TTTTACATATATAAAGTTTTTACATATGATGCATGGTTAATTAATTATTAGATGCATGAACCCTAGGG-GTTTTTTTTGT
AAAACTGTAAACCCTGGATAAT----------------------------------------------------------
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------------
>chr3D_1
TGATATAGTAAGTGGTAGGTAGCGCAACATAGCAATAAAGCGAA-CAACTAGCA-AGCAAAGATAGAAGTGATTTCGAGG
GG-T-GGTCATCTTGCATGAGATCCCGCTAGGAAGAAGAGCGAGTCCATGAAGAAGACAAACGGATGTAGTCGAACGAAT
CCTCACAACTCCGGAACGAAACCGAAGCTAACGAGAGAAGCAACCCGGAAAGAAACAAACAACATAGTAAACAACCACCA
CATACACATGGCATGATGCAAAAACAAATATGATGCATGTCCGGTTTAATGAGGCATGGCATGGCAA-AGTGCAACAAAC
AACACTACAAATTAAGTGGAGCTCAGTATGCAACGAGTTGCATACTGACGAAACGCCACATT-CGAGTTATTTAGTTCGC
TCTTGTTTAAG-AACACAACAATATTAAGTGTTGATTAACATGGC--AAGAGGTGAAGCATAAGTAAACTA-ACTATTTA
GGCAAGTTTAAATGAGGCCGGAA-CAACAAACAACAATTCCGGAAAATCCTCATGTCCATATTTTAG-A-TTTGGTACTG
TTCTGCCATAAACACAATTTTAATGTTGTTAAA-CA-GCAAAATGAAGTGCACCATGTTAAACTAGGCATTTTTCTACCC
CATTTACATATAAAGTTTATTAAAATCCGAGTTACGGTTATTTAGTTATGAAATAAATCATTTTAACATGGCATTTATGC
AAAATTAAATAAACAGCATTTTAAACATTTTAACATGGGATGAAAGTTGCATATTATGAAACTAGATGAAATTCTAAGCA
TTTTTCATATATAAATTATTTACAAAAGATGCACGGTTAATTAATTATTAATGCA-TGAACAT-GAGGGGTTTTT-CGGC
AATACTGTAAATCCTCGGATAA--TAGCTAAAT-TCGCAGATCCTGAAAA-AAAAACAT-CACATGGGCCGAATGTGAAT
AGGAAGCCCAACAGAGGAAAAAAAACAAGAGGAGGGGCGCTGGGGTGTGGCCTCACCCAGTGGGCCTTGGCCCGTTCG--
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------------
>chr2D_1
TGATATAGCAAGTGGTAGGTAGCGCGGCATAGCAATAGAGCGAA-CAACTAACA-AGCAAAGATAGAAGTGATTTTGAGG
GTAT-GGTCATCTTGCCTGAGATCCCGCAAGGAAGAAGAACGAGTCCATGAAGAAGACAAACAGACGTAGTCGAACGAAT
CCTCACAACTCCGGAACGAAACCGAAGCTAACGAGAGAAGCAAACCGGAAAGAAGCAAACAACATAGTAAACAACCATCA
CATCAACATGGCATGATTCACAATCAAGTATGATGCATGTGCGGTTTAAATAGGCATGGCATGGCAA-AGTGCAACAAAC
AATACTACGAATTAAGTGGAGCTCAATATGCAACGAGTTGCATATTGACGAAACACCACAT--CAA-TTATTTAGTTCTC
TCCCGTTTATG-TACCCAACAATATTAAATGTGGTCAAGCATGGC--AAGAGGTGAAGCATAATTAAACTA-ACCATTTA
GGCAAGTTTAAATGAGGCTGGAAATAATAAACAACAATTCCGGAAAATCCTCATGTGCATATTTT-G-A-TTTGGTACTG
TTCTGCCCTAAACACAATTTTAATGTTGTT-AA-CG-GCAAAATAAAGTGTACCAAGTTAAACTATGCATTTTTCTACCC
CATTTACATGTAAAGTTTATTAAATTCGGAGCTATGGTTATTTAGTTATGAAATAAAGCATTTTAGCATGGCATTTAAGC
AAATTAAAGCAAGCAGCAATTTAAACATTTTTAACATAGATGAAAGTAGCAGATTATGAAACTAGATGAAAAACTAAGCA
TTTTTCATATATAAATTATTTACATATGATGCATGATTAATTAGTTATTATATGCATGAACACTAGGG-GTTTTT-CTGT
AAAACTACACTCTCTGGATAAT--TGGACAAAA-TCGCAGAAC--GG-AA-AAAAACAA-GACATGGGCCGAATCTGG--
--------------------------------------------------------------------------------
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------------
>chr2D_1
TGATATAGCAAGTGGTAGGTAGCGCAGCATAACAATAGAGCGGA-CAACTAGCA-AGCAAAGATAGAAGTGATTTCGAGG
GTAT-GGTCATCTTGCCTGAGATCCCGCAAGGAAGAAGAACGAGTCCATGAAGAAGACAAACAGACGTAGTCGAACGAAT
CCTCACAACTCCGGAACGAAACCGAAGCTAACGAGAGAAGCAACCCGGAAAGAAACAAACAACATAGTAAACAACCATCA
CATAAACATGGCATGATGCACAATCAAGTATGATGCATGTCCGGTTTAATGA-GCATGGCATGGCAA-AGTGCAACAAAC
AACACTACAAATTAAGTGGAGCTCAATATGCAACGAGTTGCATATTGACGAAACACCACAT--CAA-TTATTTAGTTCTG
TCACGTTTATG-TACCCAACAATATTAAATGTTATTAAACATGGC--AAGAGGTGAAGCATATGAAAACTA-CCTATCTA
GGCAAGTTTAAATGAGGCCAG-AACAACAAACAACAATTCCGGAAAATCCCCATATGCATATTTCAG-A-TTTGGTACTG
TTCTGCCATAAACACAATTTTAATGTTGTTAAA-CA-GAAAAATAAAGTGCACCAAGTTAATCTATGCATTTTTCTACCC
CATTTACATATAAAGTTTATTAAAATCCGAGCTACGGTTATTTAGTTATGAAATAAAGCATTTTAGCATGGCATTTATGC
AAAATTAAACAAACAACATTTTAA-CATTTTAACATGGGATGAAAGTGGCATATTATGAAACTAGAAAAAATTCTAAGCA
TTTTACATATATACATTATTTACATATGAGGCATGGTTAACTAGTTATGAGATGCATGATGTGCAAGG-ACTTTT-CTGT
AAAACAACAAACTCCTGGATAA--ATAGC-AAT-GCATCC-AG--GT-AG-AAAAAACA-ACTACGGGCCGGATCTG---
--------------------------------------------------------------------------------
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------------
>chr2D_1
TGATATAACAAGTGGTAGGTAGCGCAACATAGCGATAGAGCGAA-CAACTAGCA-AGCAAAGATAGAAGTGATTTCAAGG
GTAT-GGTCATATTTCCTGAGATCCCGCAAGGAAGAAGAACAGGTCCATGAAGAAGACAAATGGACGTAGTCGAACGAAT
CCTCACAACTCCGGAACGAAACCGAAGCTAACGAGAGATGTAAACCGGAAAGAAGCAAACAACATGGTAAACAACCAACA
CATAAGCATGGCATGATGCACAATCAAGTATGATGCATGTCCAGTTTAATGAGGCATGGCATGGCAA-AGTGC-ACAAAC
AATACTACAAATTAAGTGGAGCTCAATAAGCAACGAGTTGCATATTGATGAAACACCACAT--CAA-TTATTTAGTTCTC
TCTCGGTTATG-TACCCAACAATATTAAATGTTGATTAACCATGGCAAAAGGGTGAAGCATAAGTAAACTA-ACTATTTA
GGCAAGTTTAAATGAGGCCGGAAACAACAAACAACAATTCTGGAAAATCCCCATATGCGTATTTT-GGA-TTTGGTACTG
TTTTGCCCTAAACACAATTTTAATGTTGTTAAA-CA-GCAAAATGAAGTGCACCATGTTAATCTATGCATTTT-CCACCC
GATTTACATATAATGTTTATTAAATTTGGAGCTACGGTTATTTAGTTATGAATTAAAGCATTTTAGCATGGCATTTGAGC
AAATTAATTCAACC---------AACATTTTAAACATGGATGAAAGTTGAATATTATGAAACTAGATGGAATTCTAAGCA
TTTTACATGGTTGAAGTTTTAACATGTGGTGCATGGTTATTTAGTTATTAAATGCATGAACATCAAGG-GGTTTT-CTGC
AATTCTGTAAAACCTGGGATAA--ATGCTAAAACGTCCAGAAC--TG-AA-AAAAAAAC-GATGCGGGCTGAAACTGGAG
GCTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>chr2D_1
TGATATAGCAAGTGGTAGGTAGCGCAGCATAGCAATAGAGCGAA-CAACTAACA-AGCAAAGATAGAAGTGATTTCGAGG
GTAT-GGTCATCTTGCCTGAGATCCCGCAAGGAAGAAGAACGAGTCCATGAAGAAGACAAACAGACGTAGTCGAACGAAT
CCTCACAACTCCAGAACAAAACCGAAGCTAACAAGAGAAGCAAACCGGAAAGAAGCAAACAACATAGTAAACAACCATCA
CATCAACATGGCATGATGCACAATCAAGTATGATGCATGTCCAGTTTAAATAGGCATGGCATGGCAA-AGTGCAACAAAC
AATACTACAAATTAAGTGGAGGTCAATATGCAATGAGTTGCATATTGACGAAACACCACAT--CAA-TTATTTAGTTCAC
TCCCGTTTATG-TACCCAACAATATTAACTGTGGTTAAGCATGGC--AAGAGGTGAAGCATAATTAAACTA-ACTATTTA
GGCAAGTTTAAATGAGGCCGGAAATAATAAACAACAATTCCGGAAAATCCTCATGTGCATATTTT-G-A-TTTGGTACTG
TTCTGCCCTAAACACAATTTTAATGTTGTT-AA-CG-GCAAAATAAAGTGTACCAAGTTAAACTATGCATTTTTCTACCC
CATTTACATATAAAGTTTATTAAATTTGGAGCTATGGTTATTTAGTTATGAAATAAAGCATTTTAGCATGGCATTTAAGC
AAATTAAAGCAAGCAGCAATTTAAACATTTTTAACATAGATGAAAGTAGCAGATTATGAAACTAGATGAAAAACTAAGCA
TTTTTCATATATAAATTATTTACATATGATGCATGATTAATTAGTTATTATATGCACGAACACTAGGG-GTTTTT-CTGT
AAAACTGCACTCTCTGGATAAT--TGGACAAAA-TCGTAGAAC--GAAAA-AAAAACAA-GACATGGGCCGAATCTGG--
--------------------------------------------------------------------------------
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------------
>chr6D_1
TGATATAGCAAGTGGTAGGTAGCGCGACATAGCAATAGAGCGAA-CAACTAGCA-AGCAAAGATAGAAGTGATTTCGAGG
GTAT-GGTCATCTTGCCTGAAATCCCGCTAGGAAGAAGAACGAGTCCATGAAGAAGACAAACGGATGCAGTCGAACGAAT
CCTCACAACTCCGGAACGAAACCGAAGCTAACGAGAGAAGCAACCCGGAAACAAGCAAGGAACATAGTAAACAATCATCA
CATAAACATGGCATGATGCACAATCAAGTATGATGCATGTCGAGTTTAATGAGGCATGGCATGGCAA-GGTGC-ACAAAC
AATACTACAAATTAAGTGGAGCTCAATATGCAACGAGTTGCATATTGATGAAACACCACAT--GAC-TTATTTAGTACTC
TCCCATTTATG-TACTCAACAATATTAAATGTTGACTAACATGGC--AAGGGGTGAAGCATAAGTAAACTA-ACTATTTA
GGCAAGTTTAAATGAGGCCGGAA-CAACAAACAACAATTCCGGAAAATCCCCATATGCATATTTT-G-AATTTGCTACTG
TTCTGCCCTAAACACAATTTTAATGTTGTTAAA-CA-GCAAAGTAAAGTGCACCATGTTAATCTATGCATTTTTCTACCC
CATTTACATATAAAATTTATTTAAAATGGAGCTACGGTTAATTAGTTATGAAATAAATCATTTTAACGTGGCATTTAAAC
AAACAACAAG---------TTTAAACATTTTAAAGATGGATGAGAGTGGCAGATTATGAAACTAGATGAAAAACTAAGCA
TTTTTCATATATAAATTATTTACATATGATGCACGGTTCTGAAGTTATTATATGCATGAACATGGAGG-GTTTTT-CTGT
AAAACGGCACTCTCTGGAAAAAAATAGCTAAATCGCAGCA-GC--AT-GA-AAAATTAC-ACAACGGGCTGAACCTGG--
--TTGGCCCAATCGGC---AGAA-AAAAACAGAGGGGCTCTGGGGTGTGGCCTCACCCATGGGCTTCGGCCCGGTTCGGT
GGAGAGGGAGGCTGGAAGGGGCGCTGGGCCT-------------------------------------------------
--------------------------------------------------------------------------------
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------------
>chr4B_7
------AACAAGTGATAGGTAGCACAGCATGGCGATAGAACAAAGCAACTAGCATAGCAATGATAGTAATGAGATCCAAG
GTGACGGTCATCTTGCCTGAAATCCCGCTAGGAAGAAGAACGAGTCCATGAAGAAGACGAACGGAAGAAGTCGAACGAAT
CCTCACAAT--CACAACATTACCGGAACTAAGAAGCAAC----ACCGGAAAGAAACAAACAACATGGCACA------AG-
TATAGACATGGCATGATGCACAAACAAGTATGATGCATGTCTGGTTTAAAGAGGCATGTCATGGCAATA-TGCAACAAAC
AATACTACAAGTTAAGTGGAGCTCAATATGCAACGAGTTACATATTGACGAAACACCACATA-CAA-TTATTTAGTTCAC
TCCCGTTTATGCTACCCAACAATATTAAAGGTTG--TAACATGGC--AAGAGGTGAAACATAATTAAACTACACTATCTA
GGCAAGTTTAAATGAGGCCGGAA-CAACAAACAACAATTCCGGAAAATCCTCATATGCATATTTT-GGA-TTTGGTACTG
TTCTTCCCTAAACCATATTTTATTGTTGTTAAA-CA-GGAAAATAAAGTGCACCATGTTAAACTAGGCATTTTTCCACCC
CATTTACATATAAAGTTTATTTAAAACCGAGCTACGGTTATTTAGTTATGCAATAAATCATTTTAACATGGCATTTGAGC
AAATTTAAACAAACAACATTTTAAACAAATTTAACATGGATGAATGCTGCATATTATGAAACTAGAAGGAATTCTAAGCA
TTTTACATATTTAAAACATTTTAATCCGATGCACGGTTTGTGAGATATTAAATGCTTGAACAT-GAGG-GTTTTT-CTGT
AAAACTGCAGTTCCTGGAAAAA--TAGCTAAAA-TCGTCC-AA--AG-GA-AAAAACAT-GTCACGGGCCGAAACTGG--
--CTGGCCCAAC--AG-----------AGAGGAGGGACTGTGGGCG-----CTCACCCAT--GGGTTTAGCCCAGTCGGT
GGATGCGGCTG-----AGGCGCGCTGGGCCTGGCACAGATCTGGCCCAAGCGGGC-------------------------
--------------------------------------------------------------------------------
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------------
>chr6D_1866
--------------------------------------------------------------------------------
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---------------TTGGGTCGATGGGGAAAACAAGGAGGAGACTAGGGGAGGTGTTGGTTGGTTCGCTGGTGATCCCG
AGGGGAACCAGAGAGAGTGGCGGCGGGGAGGAGGATCCCTAGAAAATAGGGTTT-GGTTTGA-TTTGGGTATGGGCTGGT
CTATATATATGGACAATAAGATTAGGTTTGGACCCTCTGATCAAAATCGGACGGTCTCGAATAAATAGGTTAGG-GAGCC
CAATTTAAAAAACAGAGATGTTTTATAGATGTTTGGGGATGATCCGGACCCAACGGTAACGATAGTCCAGTTCGGGTTCG
GGGAAGTTTCGGACACGGGCGAGGGGTCGATGCACTGTGCAAAGAGGGTT-AGGCGGACGAGGTCAAGTGTGTGGTTGGA
CTGAGAATGGTCAAGGAAGACAAATGGTCTGACGACATGTCACGGAGACAAGGAGAA--GCGGCAACTACGAACGACTAC
GAGTTTTAAGAAAACATGCGGATGCAATATGCATGATGACATGATGAAATGCAACAACAACAACACTAAAACA--CATGA
CGGTCACGCAAAACA--TGGAAGGCATCTGGAGCGTCAGTCTCGGGGTGTTACA--------------------------
------------
>chr4D_1866
--------------------------------------------------------------------------------
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---------------TTGGGTTGATGGGGAAAACAAGGAGGAGACCAGGGGAGGTGCTGGTTGGCTTGCTAGTGATCCCA
AGGGGAACCTGAGAGAGTGGCAGCGGGGAGGAGGATCCCTAGAAAATAGGGTTT-GGTTTGA-TTTCGGTAGGGGTCGGT
CTATATATAGGGACAATAGGATTAGGTTTGGACCCTCCGATCAAAATCGGACGGTCTCGGATAAATAGGTTAGG-GAGCC
CAATT-AAAAAACGGAGATGTTTTATAGATGTTTGGGGATGATCCGGACCCAACGGTAACGATAGTCCAGTTCGG-TTCG
GGGAAGCTTCAGACACAGGCGAGGGGTCGATGCACTGTGCAAAGAGGGTT-AGGCGGATGAGGTCAAGTGTGTGGTAGGA
CTGAGAATGGTCAAGGAAGACAAACGGTCTGACGACATGCCATGGAGACAAGGAGAA--GCGGCAACTATGAACTACTAC
GAGTTTTAAGAAAACATGCGGATGCAATATGCATGATGACATGATGAAATGCAAAAACAACAACAATAAAACA--CATGA
CGGTCACGCAAAACA--TGGAAGGCATATGGAGCACCGGTCTCGGGGTGTTACA--------------------------
------------
>SNPs
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
---------------S--------------------------------------S-------------------------
----------S---------------------------------------------------------------------
----------S---------------------------------------------------------------S-----
-------------------------------------------S------------------------------------
-----------S--------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--S--------------------------------------S--------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
----S--------------------------------------------------S------------------------
-----S----------------------------S---S----------------S------------------------
------S--------------------------------------------S---S------S-----------------
-S---SS---------------------S--------------------------S-S-------S--------S-----
---------------------------------S-------------------S--S--S--------------------
-----------------------------S-S---S-----------S-------S--S-----------S------S--
--S--S------S----S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S-S-SS-
--S------------S-----------S--S---------------------------S-----------S---------
---S-----------S-----------S----------S------S-----------S------------------S-S-
------------S------------S-S-S------S--S---------------S--S-------S-------------
--------------SS----S---------S---S-------SS--S--------S--------------------S---
--------------------SSS-----SS--S-----S--------------S--------------S-S-S-S-----
--S-----------------------------------------S--------S---------S----------S---S-
------------S-------------------------------------------------------------------
----S---------------S-----------------------------------------S-----------------
-----------------------------S-----------------S--------------------------------
-----------S---------------------------------------------S----------S-----------
--------------------------------S---------------------------S-------------S-----
------------------------------S------------------S------S--------S---------S----
--------------------------------------------------------------------------------
--------S-S--------------------S-------------------------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS
>forward_966
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------GGCTGAATCTGGCA
GGTTGT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>reverse_1933
--------------------------------------------------------------------------------
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------------TGGTTGGTTTGGTGGGGAAT------------------------------------------------
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------------
