>input_sequence_23364
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-----------------------------------------ATGGAGGCGCCTTCGTCATCCCCTACTCTGCAAGATCAT
CTCTCCCGGCCAACTGGCCCCTTGCATCTCAAAGTATGGGAGGTTGTATGCATTGCCTTGGGAGTGTTCATGGCGGTCGT
CTTCTTTTTAACTGTCTGGCTCACTATGCGGAGTAGGAAGAGGACCAGACGAGCATCTGGAAATATCCCAGTCACCCAAA
TCCCTGCCATTTCCAAGGAAATCAAGGAAGTCAGGGTGGAGCAAGTCCCTGCAACTGACTTTGGGGCGCATGACGGAGTC
CTGCTAACGATCCAAGACAAGCCTAGTGACCGGGAATCAGACAAGGTCATGGTCCATTTGGGTGTAAGCAAATCGAGACG
TGGGGACGAGAGCCACTCAGGGTCATTCCGTTACATGGACAAGGATGCAGGCTTTCAATCAGCTGAAGAAGGAGGGTCGG
GAACTTTTCGTCAAGCTTCAATTCATGGAATAACCGCCCCTTCACCTTTGGTTGGCTTGCCAGAGTTCTCCTACCTTGGC
TGGGGTCATTGGTTTACTTTGAGGGATTTGGAACTTGCCACTAACCGTTTTTCCAAGGATAACATTATTGGTGAGGGTGG
ATATGGTGTAGTTTATCGTGGCGAGATCGTTAATGGCACTCCTGTTGCTGTCAAAAAGCTTCTCAATAACCTGTAAGAAT
TGCCTTATCACAATTAGGCCTGCCTGTTTACACTGCCCATATATGTTCCTCCGTAACAGAACATCCTGCTTTATATTGAA
TTTATTTTTATCAAATGATGTTATTTGATCTTGTAGAGGGCAAGCTGAGAAGGAATTCAGAGTAGAAGTTGAGGCTATTG
GTCATGTTCGCCACAAGAACTTAGTCCGTCTTCTTGGTTACTGTGTGGAGGGTACTCAGAGGTAC-TTGTACTGTCTTTC
ACTGTCATATTCCTGTTA----TATCTCTATTATCATTGGTCACATATCGCATTCACAAGAGAAAA--------ACATAT
CCTTGGTACATGTATTACCAAGCAAATCATTTTATTCTTGACCTTCAATGCTCTGCAGAAC-ATAAAACTCGTTTAACTG
CAATGATTGTATGGAATTCTGTTGCATCATTCCTTACTTCAAGTGACCTTTTCAGGATACTTGTCTATGAATATGTGAAC
AATGGAAACCTAGAGCAATGGCTTCATGGAGCTATGAGTCACCGGGGCTCCCTTACATGGGAGGCCCGCATAAAGATTCT
TCTAGGGACAGCTAAAGCGTGAGTTCTCCCTGAAATGTCCTTTCTTTCTGCTAATGCC-GTGTCATTTATTCTTTATCTT
GCCAATTGGATAATGCAATCATAAAGGTCCCGAAATTGCATCATATTTCTACCTGGAGCTAATTCTACATTAAATAGTAA
TTGCTCTATAACATATTGTCATTCACGATGGAAGTGAGGCTTAAGCTGAATGAATTCCTAATACCATGTCTATCTTGTGT
AACAATTTAATTCAATATTTTTCTCCTCCGAACTAACCATGTAAATACTTTCATTCAATTCATTGCAGGCTTGCTTACTT
GCATGAGGCAATTGAACCGAAAGTCGTGCACCGTGATATCAAATCCAGCAATATTTTGATTGATGATGATTTTGATGCTA
AAGTATCAGATTTTGGTTTAGCCAAGCTTCTTGGTGCCGGCAAGAGTCATGTAACTACTCGGGTTATGGGAACCTTTGGG
TATGTTGGGCAACTAATGAGCTAGAGTACAGTTACACTATGTTAGTGATAGTTAATAATGTGCTGCATTTACTCATTGCA
GCTATGTGGCACCAGAATATGCAAACACTGGACTGTTGAATGAGAAAAGTGACATTTACAGCTTTGGAGTTGTTATTCTA
GAGGCAATTACAGGGAGGGATCCTGTTGACTATGGTCGCCCGGCAAATGAGGTATTTGTGAGTTGTCAAAACTGTTTGTT
AGATGCATTCTGCTTGTTTTTAATACCATCAAGTGGCAAGATATCATTAGGACGGTAACATTAGGATGCTTCTTATCTCA
AG------------------------------------------------------------------------------
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-----------------------------------------------------CAGCATTTGTGGCACTAAATTAGTATC
ACTAGATTTGTTGTGAAATGTACTTTCATAATATACCAATTTGATGTTATATATGCTAGTACTCTTTTGTATAAAGTTGG
TCAAAATTTGAAAACTT-GACTTAAGACAAAAGGTAGAAGTACACTTGTTCGCGGACGGAGGGAGTACATATTATCATTT
ACCAGTTTACACCCTTGTTAACTCGATAGTGTTCATCTATGCATAAATAGCATAACTTGG-TCATTCAGAGCCTTGACAG
TACATCTTTATGCACCATGAGGTTG-------------------------------------------------------
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-----CGAATTAATCCTCAGCCTTTGTAAATTTCTATTCATGTG-------CTAGGGGCACACTCGCATGCGTTTTGTGC
ACGTGTTGCAGTGTGCACGCTTGTCTGTCTATATTGTGGTCTGAAGAGGGCATAACTTGATCATTTGTAGGATAAAATAC
TATTGACCACATTGAATTATAAAAATACATTGCTCATAAATATCTTTCATGTGATGCGTAGTGTCTTGCATTGTCTCTCC
AGTGAAATCAGGGGGTCATTCCTTGCGATTTTCCAACT-AACACATGATTTTGTGTCGTTTGCAGGTAAATCTGGTTGAC
TGGTTAAAAATGATGGTTGCTAGCAGGCGTTCAGAGGAGGTGGTGGATCCCACCATAGAGACACGGCCTTCGACAAGGGT
TCTCAAGCGTGCACTTCTAACAGCTTTGAGGTGCGTGGATCCGGATTCAGAAAAGAGACCGAAGATGGGTCAAGTTGTGC
GGATGCTGGAGTCAGATGATCCAATTCCTCGTGTGGTACGTAATGCTTTTTGAAAGAT-AAAAAATAGCAACTTCATACT
TTTTTATGTCATGCATGTATTCTTAATTACTTTTAATTGTTTTTTTCCGATACATTTCATGTGAATGTGTGGTGGGAGGG
AACCATTCATTCAATGAACTCACACTTGTTCTCATATATGTTGACCATTGATTGATTATGATA---CTGAAAGCAG-AAA
AAATGATGTGAGCAGGACAGAAGATCGAGGCATAACCGC-GGGGGGAGCACCGAAATGGACTCCCAACGGGAGAACTCCG
ACACGGACAAGAGTGACAACCCAGATTCCAAACCGAGCAGGAGCAGAGCATCATCTTCCAAATGA---------------
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>chr3D_1_TraesCS3D01G169000
CTTGAAAACAATGTTCCAAAACTGTTGTAGTATGAAACAGTTTACCAAATTATTGTATTCTGAAACTGCCGTTGACTTCC
TAATTGTTTCTTGTAATTTGGGAAACGTCGAGCTGTGGTTCCCAACCGATGTGCAGTGGAGAAAAGCCAGGAGTGACCAT
TGCCTTTCAGCTTGCCTCTTCAGAAGTCTCACCACCCCGGACATGATGATGTTATATTTTAGTTTTTTT-GTTCTAAGAC
ATAGGTCCAGGACAACCCCGCAGTTCTTGCATTTGCATCAGCATTTCTGATAGACAATATTGATTCATTCCAATTTGTGT
GCACCTTGCAGTTCTAAAATTCAGAACTTGTTGAGCAGTGATGCTCTTATTTATAATGGTTGCTCTTGTTCTGGTACATA
TACCTGGCTGCAATATTACTAGTGGCACATGAAAATAGTCCAGAAAACAACTTGATTGCAGTGATAGATTGTTACTAGCT
GCAATATTTGCAAAATTATTGTTTTCATACTGAATTCGGACTTGTTTGTGTGCCTGGAGCAAACCCCCTGTTGCCTATTG
CCAAACAACCAAAGGGAAAGGGGGAGATCATCCCCACGGGAGAAGGGGGTCCCTTGTGCCCGTGAAAATTCCCCACATGG
GTTTGCTACCCTGGGTTTTCCTCCCCTTGCAACCAAACAAAGCCTGAGGGAAATTAAATGCGCTAGCTGTCGATCCCTGT
ATGTGTATGTGTCGGTGCTGCGATCGGTCGCCATCGCGGGAATTTATTCCCCTTGTGCAGCCTCAGAGTAACACCTTGTC
CTTGATTCCCTTCCAGCCCAAGATCATGTCTTAATTACCGCAATTTAATTCGGGAATCCGTCATTCTTTATGGGCTTGTA
CCGTGGACGTAGATGCTCACAGTTGCGTTTAATTAGCTGCAATGTCTGATCTGTGGAGCTGTGCAACATGGGTACCTAAC
AGTTTTGCTTGTATGTAGGATCAGGACACTGGTAGTCCACTATGGAGGCGCCTTCGTCATCCCCTACTCTGCAAGATCAT
CTCTCCCGGCCAACTGGCCCCTTGCATCTCAAAGTATGGGAGGTTGTATGCATTGCCTTGGGAGTGTTCATGGCGGTCGT
CTTCTTTTTAACTGTCTGGCTCACTATGCGGAGTAGGAAGAGGACCAGACGAGCATCTGGAAATATCCCAGTCACCCAAA
TCCCTGCCATTTCCAAGGAAATCAAGGAAGTCAGGGTGGAGCAAGTCCCTGCAACTGACTTTGGGGCGCATGACGGAGTC
CTGCTAACGATCCAAGACAAGCCTAGTGACCGGGAATCAGACAAGGTCATGGTCCATTTGGGTGTAAGCAAATCGAGACG
TGGGGACGAGAGCCACTCAGGGTCATTCCGTTACATGGACAAGGATGCAGGCTTTCAATCAGCTGAAGAAGGAGGGTCGG
GAACTTTTCGTCAAGCTTCAATTCATGGAATAACCGCCCCTTCACCTTTGGTTGGCTTGCCAGAGTTCTCCTACCTTGGC
TGGGGTCATTGGTTTACTTTGAGGGATTTGGAACTTGCCACTAACCGTTTTTCCAAGGATAACATTATTGGTGAGGGTGG
ATATGGTGTAGTTTATCGTGGCGAGATCGTTAATGGCACTCCTGTTGCTGTCAAAAAGCTTCTCAATAACCTGTAAGAAT
TGCCTTATCACAATTAGGCCTGCCTGTTTACACTGCCCATATATGTTCCTCCGTAACAGAACATCCTGCTTTATATTGAA
TTTATTTTTATCAAATGATGTTATTTGATCTTGTAGAGGGCAAGCTGAGAAGGAATTCAGAGTAGAAGTTGAGGCTATTG
GTCATGTTCGCCACAAGAACTTAGTCCGTCTTCTTGGTTACTGTGTGGAGGGTACTCAGAGGTAC-TTGTACTGTCTTTC
ACTGTCATATTCCTGTTA----TATCTCTATTATCATTGGTCACATATCGCATTCACAAGAGAAAA--------ACATAT
CCTTGGTACATGTATTACCAAGCAAATCATTTTATTCTTGACCTTCAATGCTCTGCAGAAC-ATAAAACTCGTTTAACTG
CAATGATTGTATGGAATTCTGTTGCATCATTCCTTACTTCAAGTGACCTTTTCAGGATACTTGTCTATGAATATGTGAAC
AATGGAAACCTAGAGCAATGGCTTCATGGAGCTATGAGTCACCGGGGCTCCCTTACATGGGAGGCCCGCATAAAGATTCT
TCTAGGGACAGCTAAAGCGTGAGTTCTCCCTGAAATGTCCTTTCTTTCTGCTAATGCC-GTGTCATTTATTCTTTATCTT
GCCAATTGGATAATGCAATCATAAAGGTCCCGAAATTGCATCATATTTCTACCTGGAGCTAATTCTACATTAAATAGTAA
TTGCTCTATAACATATTGTCATTCACGATGGAAGTGAGGCTTAAGCTGAATGAATTCCTAATACCATGTCTATCTTGTGT
AACAATTTAATTCAATATTTTTCTCCTCCGAACTAACCATGTAAATACTTTCATTCAATTCATTGCAGGCTTGCTTACTT
GCATGAGGCAATTGAACCGAAAGTCGTGCACCGTGATATCAAATCCAGCAATATTTTGATTGATGATGATTTTGATGCTA
AAGTATCAGATTTTGGTTTAGCCAAGCTTCTTGGTGCCGGCAAGAGTCATGTAACTACTCGGGTTATGGGAACCTTTGGG
TATGTTGGGCAACTAATGAGCTAGAGTACAGTTACACTATGTTAGTGATAGTTAATAATGTGCTGCATTTACTCATTGCA
GCTATGTGGCACCAGAATATGCAAACACTGGACTGTTGAATGAGAAAAGTGACATTTACAGCTTTGGAGTTGTTATTCTA
GAGGCAATTACAGGGAGGGATCCTGTTGACTATGGTCGCCCGGCAAATGAGGTATTTGTGAGTTGTCAAAACTGTTTGTT
AGATGCATTCTGCTTGTTTTTAATACCATCAAGTGGCAAGATATCATTAGGACGGTAACATTAGGATGCTTCTTATCTCA
AG------------------------------------------------------------------------------
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-----------------------------------------------------CAGCATTTGTGGCACTAAATTAGTATC
ACTAGATTTGTTGTGAAATGTACTTTCATAATATACCAATTTGATGTTATATATGCTAGTACTCTTTTGTATAAAGTTGG
TCAAAATTTGAAAACTT-GACTTAAGACAAAAGGTAGAAGTACACTTGTTCGCGGACGGAGGGAGTACATATTATCATTT
ACCAGTTTACACCCTTGTTAACTCGATAGTGTTCATCTATGCATAAATAGCATAACTTGG-TCATTCAGAGCCTTGACAG
TACATCTTTATGCACCATGAGGTTG-------------------------------------------------------
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-----CGAATTAATCCTCAGCCTTTGTAAATTTCTATTCATGTG-------CTAGGGGCACACTCGCATGCGTTTTGTGC
ACGTGTTGCAGTGTGCACGCTTGTCTGTCTATATTGTGGTCTGAAGAGGGCATAACTTGATCATTTGTAGGATAAAATAC
TATTGACCACATTGAATTATAAAAATACATTGCTCATAAATATCTTTCATGTGATGCGTAGTGTCTTGCATTGTCTCTCC
AGTGAAATCAGGGGGTCATTCCTTGCGATTTTCCAACT-AACACATGATTTTGTGTCGTTTGCAGGTAAATCTGGTTGAC
TGGTTAAAAATGATGGTTGCTAGCAGGCGTTCAGAGGAGGTGGTGGATCCCACCATAGAGACACGGCCTTCGACAAGGGT
TCTCAAGCGTGCACTTCTAACAGCTTTGAGGTGCGTGGATCCGGATTCAGAAAAGAGACCGAAGATGGGTCAAGTTGTGC
GGATGCTGGAGTCAGATGATCCAATTCCTCGTGTGGTACGTAATGCTTTTTGAAAGAT-AAAAAATAGCAACTTCATACT
TTTTTATGTCATGCATGTATTCTTAATTACTTTTAATTGTTTTTTTCCGATACATTTCATGTGAATGTGTGGTGGGAGGG
AACCATTCATTCAATGAACTCACACTTGTTCTCATATATGTTGACCATTGATTGATTATGATA---CTGAAAGCAG-AAA
AAATGATGTGAGCAGGACAGAAGATCGAGGCATAACCGC-GGGGGGAGCACCGAAATGGACTCCCAACGGGAGAACTCCG
ACACGGACAAGAGTGACAACCCAGATTCCAAACCGAGCAGGAGCAGAGCATCATCTTCCAAATGAGCACACAAGCACTCA
CATTTCTCCAACAAGCTAGTAACGATGGAAGCTTTGACTACGAAAGGGCTGATGAAAAA-CGTGTATTTCGTGTTGTTTC
TGGACAGTTGTAACA-TTTTTATGTATGATTTATTTGTAGAGGCTATTGGTTTTCTA-------CTACCT-AACAATTTA
TTTGTACCTACACCAGTTGT--T---GACGATGTGCTGCTGAAAGTTGTTAACAGTGCTGTGTACAGT---------TGT
AGGCTCATGAGTACTGGCACAAGAGAGTATCGTGTGTGAATTTAATTGAAA---GTTGTCCGTCCTCTTCTCAAATA---
-------------GGCATTTCATTTCATGAAAAGGCAAAGAGTGAGCAAGCAAGAAGCACATCGTCCATTGCTTTGCTCG
CTAGGAGAGGTCGAGAGGCCACCACACCTGCC--------TGCCTGCCCAACGTACAACAGCACGAGCCCCCGCCAAGGG
AGGAAGAAAATGAGATCCCACCACACCACACC----------AAACCTCACCTCACCACACTCACCTCACCACACATCCA
GGAATAAGTATCTAGGGAGAACATGAGCGTTCTCATATCTCAGCGACTCTCGGCCGTCGGATCGTTTTTTGATGCGTTTT
TGACCGTCGGATCTCGCTCCTGGAAGACCTTGGCCCTTGGATCAAAAAAAGTTACTGCTACAATGAATAGTAATAAATAG
TGTGCACTCCAGCATTGCCACCGCCTGTAAAATTGGGTGGCCGCCGAGGGCATTCTCGTCATTTCACACGAGGATGTATA
AAACGGGGTGGCTCTTGTGGTGAAACCCTAGCCGTCGCTCGCGCTCGTGCTCGCGCCGCCCACCTCCTCCCGTTCCTCCC
ACCTCGCCTCTCTCTTCCTCCCGCCCCTCCCGCCGCCACCCTGCCTCCTCTCCTCCCGTGGCCATCGACCACCCGTCGAG
ATTGCCTCTCCGCCGGCGCTCCTCTCCCCTCGCCATCGCCGCTCTCCGCCGCCGGCTCCTTTCCCCTCCCCCCCCCCGGT
TCTCCT
>chr3A_1
CTTGAAAACAATGTTCCAAAACTGTTGTAGTATGAAGCAGTTTACCAAATTGTTGTATTCTGAAACTGCCGTTGACTTCC
TAATTGTTTCTTGTAATTTGGGAAACGTCGAGCTGCGGTTCCCAACCGATGTGCAGTGGAGAAAAGCCAGGAGTGACCAT
TGCCTTTCAGCTTGCCTGTTCAGAAGTCTCACCACCCCGGACATGATGATGTTATATTTTAGTTTTTTTTGTTCTAAGAC
ATAGGTCCAGGACAACCCTGCAGTTCTTGCATTTGCATCAGCATTTCTGATAGACAATATTGATTCATTCCAATTTGTGT
TCACCTTGCAGTTCTAAAATTCAGAACTTGTTGAGCAGTGATGCTCTTATTTACAATGGTTGCTCTTGTTCTAGTACATA
TACCTGGCTGCAATATTACTAGTGGCATATGAAAATAGTCCAGAAAACAACTTGATTGCAGTGATAGATCGTTACTAGCT
GCAATATTTGCAAAATTATTGTTTTCATACTGAATTCGGACTTGTTTGTGTGCCTGGAGCAAACCCCCTGTTGCCTATTG
CCAAACAACCAAAGGGAAAGGGGGAGATCATCCCCACGGGAGAAGGGGGTCCTTTGTGCCCGTGAAAATTCCCCACATGG
GTTTGCTACCCTGGGTTTTCCTTCCCTTGCAACCAAACAAAGCCTGAGGGAAATTAAATGCGCTAGCTGTCGATCCCTGT
ACGTGTATGTGTCGGTGCTGCGATCGGTCGCCATCGTGGGAATTTATTCCCCTTGTTCAGCCTCAGAGTAACACCTTGTC
CTTGATTCCCTTCCAGCCCAAGATCATGTCTTAATTACCGCAATTTAATTCGGGAATCCGTCATTCTTTATGGGCTTGTA
CCGTGGACGTAGATGCTCACAGTTGCGTTTAATTAGCTGCAATGTCTGATCTGTGGAGCTGTGCAACATGGGTACCTAAC
AGTTTTGCTTGTATGTAGGATCAGGACACTGGTAGTCCACTATGGAGGCGCCTTCGTCATCCCCTACTCTGCAAGATCAT
CTCTCCCGGCCAACTGGCCCCTTGCATCTCAAAGTATGGGAGGTTGTATGCATTGCCTTGGGAGTGTTCATGGCGGTCAT
CTTCTTTTTAACTGTCTGGCTCACTATGCGGAGTAGGAAGAGGACCAGACGAGCATCTGCAAATATCCCAGTCACCCAAA
TCCCTGCCATATCCAAGGAAATCAAGGAAGTGAGGGTGGAGCAAGTCCCTGCAACTGACTTTGGGGCGCATGACGGAGTC
CTGCTAACGATCCAAGACAAGCCTGGTGACCGGGAATCAGACAAGGTCATGGTCCATTTGGGTGTAAGCAAATCGAGACG
TGGGGATGAGAGCCACTCAGGGTCATTCCGTTACATGGACAAGGATGCAGGCTTTCAATCAGCTGAAGAAGGAGGGTCGG
GAACTTTTCGTCAAGCTTCAACTCATGGAATAACCGCCCCTTCACCTTTGGTTGGCTTGCCAGAGTTCTCCTACCTTGGC
TGGGGTCATTGGTTTACTTTGAGGGATTTGGAACTTGCCACTAACCGTTTTTCCAAGGATAACATTATTGGTGAGGGTGG
ATATGGTGTAGTTTATCGTGGTGAGATCGTCAATGGCACTCCTGTTGCTGTCAAAAAGCTTCTCAATAACCTGTAAGAAT
TGCCTTATCACAATTAGGCCTGCCTGTTTACACTGCCCATATATGTTCCTCCGTAACAGAACATCCTGCTTTATATTGAA
TTTATTTTTATCAAATGATGTTATTTGATCTTGTAGAGGGCAAGCTGAGAAGGAATTCAGAGTAGAAGTTGAGGCTATTG
GTCATGTTCGCCACAAGAACTTAGTCCGTCTTCTTGGTTACTGTGTGGAGGGTACTCAGAGGTACTTTGTACTGTATTTC
ACTGTCATATTCCTGTTA----TATCTCTATTATCATTGGTCACATATCGCATTTACAAGAGAAAA--------ACATAT
CCTTGGTACATGTATTACCAAGCAAATCATTTTATTCTTGACCTTCAATGCTCTGCAGAAAAATAAAACTCGTTTAACTG
CAATGATTGTATGGAATTCTGTTGCATCATTCCTTACTTCAAGTGACCTTTTCAGGATACTTGTCTATGAATATGTGAAC
AATGGAAACCTAGAGCAATGGCTTCATGGAGCTATGAGTCACCGGGGCTCCCTTACATGGGAGGCCCGCATAAAGATTCT
TCTAGGGACAGCTAAAGCGTGAGTTCTCCCTGAAATGTCCTTTCTTTCTGCTAATGCC-GTGTCATTTATTCTTTATCTT
GCCAATTGGATAATGCAATCATAAAGGTCCCGAAATTGCATCATATTTCTACCTGGAGCTAATTCTACATTAAATAGTAA
TTGCTCTATAACATATTGTCATTCACGATGGAAGTGAGGCTTAAGCTGAATGAATTCCTAATACCATGTCTATCTTGTGT
AACAATTTAATTCAATATTTTTCTCCTCCGAATTAACCATGTAAATACTTTCATTCAATTCATTGCAGGCTTGCTTACTT
GCATGAGGCAATTGAACCGAAAGTCGTGCACCGTGATATCAAATCCAGCAATATTTTGATTGATGATGATTTTGACGCTA
AAGTATCAGATTTTGGTTTAGCCAAGCTTCTTGGTGCCGGCAAGAGTCATGTAACTACTCGGGTTATGGGAACCTTTGGG
TATGTTGGGCAACTAATGAGCTAGAGTACAGTTACACTATGTTAGTGATAGTTAATAATGTGCTGCATTTACTCATTGCA
GCTATGTGGCACCAGAATATGCGAACACTGGACTGTTGAATGAGAAAAGTGACATTTACAGCTTTGGAGTTGTTATTCTA
GAGGCAATTACAGGGAGGGATCCTGTTGACTATGGTCGCCCGGCAAATGAGGTATTTGTGAGTTGTCAAAACTGTTTGTT
AGATGCATTCTGCTTGTTTTTAATACCATCAAGTGGCAAGATATCATTAGGACGGTAACATTAGGATGCTTCTTATCTCA
AG------------------------------------------------------------------------------
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-----------------------------------------------------CAGCATTTGTGGCACTAAATTAGTATC
ACTAGATTCGTTGTGAAATGTACTTTCATAATATACCAATTTGATGTTATATATGCTAGTACTCTTTTGTATAAAGTTGG
TCAAAATTTGAAAACTTCGACTTAAGACAAAAGGTAGAAGTACACTTGTTCGCGGACGGAGGGAGTACATATTATCATTT
ACCAGTTTACACCCTTGTTAACTTGATAGTGTTCATCTATGCATAAATAGCATAACTTGG-TCATTCAGAGCCTTGACAG
TACATCTTTATGCACCATGAGGTTGCGAATTAATCCTCAACAACAACAACAACAACAACAACAAAGCCTTTAGTCCCAAA
CAAGTTGGGGTAGGCTAGAGGTGAAACCCATAAGATCTCGCAACCAACTCATGGCTCTGGCACGTGGATTGCAAGCTTCC
ACGCACCTCTGTCCATAGCTAGCTCTTTGGTGATACTCCAATCCTTCAGATCTCTCTTAACGGACTCCTCCCATGTTAAA
GGCTGCGAATTAATCCTCAGCCTTTGTAAATTTCTAGGCATGTG-------CTA-GGGCACACTCGCATGCGTTGTGTGC
ACGTGTTGCAGTGTGCACGCTTGTCCGTCTATGTTGTGGTCTGAAGAGGGCATAACTTGATCACTTGTAGGATAGAATAC
TATTGACCACATTGAATTATAAAAATACATTGCTCATAAATATCTTTCATGTGATGCGTAGTGTCTTGCATTGTCTCTTC
AGTGAAATCAGGGGGTCATTCCTTGCGATATTCCAACT-AACACATGATTTTGTGTCGTTTGCAGGTAAATCTGGTTGAC
TGGTTAAAAATGATGGTTGCTAGCAGGCGTTCAGAGGAGGTGGTGGATCCCACCATAGAGACACGGCCTTCGACAAGGGT
TCTCAAGCGTGCACTTCTAACAGCTTTGAGGTGCGTGGATCCGGATTCAGAAAAGAGACCGAAGATGGGTCAAGTTGTGC
GGATGCTGGAGTCAGATGACCCAATTCCTCGTGTGGTACGTAATGTTTTTTGAAAGAT-AAAAAA-AGCAATTTCATCCT
TGTTTATGTCATGCATGTATTCTT-GTTACTTTTAATTG-TTTTTTTCGATACATTTCATGTGAATGTGTGGTGGGATGG
AACCATTCATTCAATGAACTCACACTTGTTCTCATATATGTTGACCATTGATTGATTATGATAATACTGAAAGCAGAAAA
AA-TGATGTGAGCAGGACAGGAGATCGAGGCATAACCGC-GGGGGGAGCACCGAAATGGACTCCCAACGGGAGAACTCCG
ACACGGACAAGAGTGACAACCCAGATTCCAAACCGAGCAGGAGCAGAGCATCATCTTCCAAATGAGCACACAAGCACTCA
CATTTCTCCAACAAGCTAGTAACGATGGAAGCTTTGACCACAAAAGGGCTGATGAAAAA-CGTGAC--------------
-----GGTTGTAACA-TTTTTATGTATGATTTATTTGTAGAGGCTATTCGTTTTCTA-------CTACCT-AACAATTTA
TTTGTACCTACACCAGTTGT--TGACGATGATGTGCTGCTGTAAGTTGTTAACAGTGCCGTGTACAGT---------TGT
AGGCTCATGAGTACTGGCACAAGAGAGTGTCTTGTGTGAATTTAATGGAAAGTTGTTGTCCGTCCTCTTCTCAAATA---
-------------GGCATTTCATTTCATGAAAAGGCAAAGAGTGACCAAGCAAGAAGCACATCGTCCATTGCTTTGCTCG
CTAGGAGAGGTCGAGAGGCCACCACA----------------CCTGCCCAACGTACAACAGCACGAGCCCCCACCAAGGG
AG------------------------------------------------------------------------------
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>chr3B_1
CTTGAAAACAATGTTCCAAAAATGTTATAGTATGAAACAGTTTACCAAATTGTTGTATTCCGAAACTGCCGTTGACTTCC
TAATTGTTTCTTGTAATTTGGGAAACGTCGAGCTGCGGTTCCCAACCAATGTGCAGTGGAGAAAAGCCAGGAGTGACCAT
TGCCTTTCAGCTTGCCTCTTCAGAAGTCTCACCACCCCGGACATGATGATGTTATATTTTAGTTTTTTT-GTTCCAAGAC
ATAGATCCAGGACAACCCCGCAGTTCTTGCATTTGCATCAGAATTTCTGATAGACAAAATTGATTCATTCCAATTTGTGT
TCACCTTGCAGTTCTAAAATTCAGAACTTGTTGAGCAGTGATGCTCTTATTTATAATGGTTGCTCTTGTTCTGGTACATA
TACCTGGCTGCAATATTACTAGTGGCACATGAAAATGGTCCAGAAAACAACTTGATTGCAGTGATAGATCGTTACTAGCT
GCAATATTTGCAAAATTATTGTTTTCATACTGAATCCGGACTTGTTTGTGTGCCTGGAGCAAACCCCCTGTTGCCTATTG
CCAAACAACCAAAGGGAAAGGGGGAGATCATCCCCACGGGAGAAGGGGGCCCCTTGTGCCTGTGAAATTCTCCACAG-GG
GTTTGCTACCCTGGGTTTTCCTCCCCTTGCAACCAAACAAAGCCTGAGGGAAATTAAATGCGCTAGCTGTCGATCCCTCT
ATGTGTATGTGTCGGTGCTGCGATCGGTCGCCATCGCAGGAATTTATTCCCCTTGTTCAGCCTCAGAGTAACACCTTGTC
CTTGATTCCCTTCCAGCCCAAGATCATGTCTTAATTACCGCAATTTGTTTCGGGAATCCGTCATTCTTTATGGGCTTGTA
CCGTGGACGTAGATGCTCACAGTTGCGTTTAATTAGCTGCAATGTCTGATCTGTGGAGCTGTGCAACATGGGTACCTAAC
AGTTTTGCTTGTATGTAGGATCAGGACACCGGTAGTCCACTATGGAGGCGCCTTCGTCATCCCCTACTCTGCAAGATCAT
CTCTCCCAGCCAACTGGCCCCTTGCATCTCAAAGTATGGGAGGTTGTATGCATTGCCTTGGGAGTGTTCATGGCGGTCGT
CTTCTTTTTGACTGTCTGGCTCACTATGCGGAGTAGGAAGAGGACCAGACGAGCATCTGCAAATATCCCAGTCACCCAAA
TCCCTGCCATTTCCAAGGAAATCAAGGAAGTGAGGGTGGAGCAAGTCCCTGCAACTGACTTTGGGGCGCATGACGGAGTC
CTACTAACGATCCAAGACAAGCCTAGTGACCGGGAATCAGACAAGGTCATGGTCCATTTGGGTGTAAGCAGATCGAGACG
TGGGGACGAGAGCCACTCAGGGTCATTCCGTTACATGGACAAGGATGCAGGCTTTCAATCAGCTGAAGAAGGAGGGTCGG
GAACTTTTCGGCAAGCTTCAACTCATGGAATAACCGCTCCTTCACCTTTGGTTGGCTTGCCAGAGTTCTCCTACCTTGGC
TGGGGTCATTGGTTTACTTTGAGGGATTTGGAACTTGCCACTAACCGTTTTTCCAAGGATAACATTATTGGTGAGGGTGG
ATATGGTGTAGTTTATCGTGGCGAGATCGTCAATGGCACTCCTGTTGCTGTCAAAAGGCTTCTCAATAACCTGTAAGAAT
TGCCTTATCACAATTATGCCTGCCTGTTTACACTGCCCATACATGTTCCTCCGTAACAGAACATCCTGCTTTATATTGAA
TTTATTTTTATCAAATGATGTTATTTGATCTTGTAGAGGGCAAGCTGAGAAGGAATTCAGAGTAGAAGTTGAGGCTATTG
GTCATGTTCGCCACAAGAACTTAGTCCGTCTTCTTGGTTACTGTGTGGAGGGTACTCAGAGGTAC-TTGTACTGTCTTTC
ACTGTCATATTCCTGTTA----TATCTCTATTATCATTGGTTACATATCGCATTCACAAGAGAAAA--------ACATAT
CCTTGGTACATGTATTACCAAGCAAATCATTTTGTTCTTGACCTTAAATGCTCCGCAGAAC-ATAAAACTCGTTTAACTG
CAATGATTGTATGGAATTCTGTTGCATCATTCCTTACTTCAAGTGACCTTTTCAGGATACTTGTCTATGAATATGTGAAC
AATGGAAACCTAGAGCAATGGCTTCATGGAGCTATGAGTCACCGGGGCTCCCTTACATGGGAGGCCCGCATAAAGATTCT
TCTAGGGACAGCTAAAGCGTGAGTTCTCCCTGAGATGCCCTTTCTTGCTGCTAATGCCAGTGTCATTTATTCTTTATCTT
GCCAATTGGATAATGCAATCATAAAGGTCCTGGAATTGCATCATATTTCTACCTGGATCTAATTCTACATTAAATAGTAA
TTGCTCTATAACATATTGTCATTCACGATGGAAGTGAGGCTTAAGCTAAACGAATTCCTAATACCATGTCTATCTTGTGT
AACTATTTAATTCAATATTTTTCTCCTCCGAATTTACCATGTAAATACTTTCATTCAATTCATTGCAGGCTTGCTTACTT
GCATGAGGCAATTGAACCAAAAGTCGTGCACCGTGATATCAAATCCAGCAATATTTTGATTGATGATGATTTTGACGCTA
AAGTATCAGATTTTGGTTTAGCGAAGCTTCTTGGTGCCGGCAAGAGTCATGTAACTACTCGGGTTATGGGAACCTTTGGG
TATGTTGGGCAACTAATGAGCTAGAGTACAGTTACACTATGTTAGTGATAGTTAATAATGTGCTGCATTTGCTCATTGCA
GCTATGTGGCACCAGAATATGCAAACACTGGACTGTTGAATGAGAAAAGTGACATTTACAGCTTTGGAGTTGTTATTCTA
GAGGCAATTACAGGGAGGGATCCTGTTGACTATGGTCGCCCGGCAAATGAGGTATTTGCGAGTTGTCAAAACTGTTTGTT
AGATGCATTCTGCTTGTTTTTAATACCATCAAGTGGCAAGATATCATTAGGACGGTAACATTAGGATGCTTCTTATCTCA
AGTTGAATCCTACTCAAAGTTTAATTTGTGTCTATTAGGATATGGAATGCTCAGAGCTGACTTTGAAAATATTATGTAAA
TGCAGTTCTGTGTCATTTTAACTTCCTATATTAACATTAGCCAACAGTAGAGTGGTTGCACTAGTATTGTTCTGGTCTTT
TCAGTCACAATGCGTGCCCCCAGTGCCCATGACAACATTGTCGACTCTGCCGCTGCTTTTAAATTAAATAATTGGCAACA
GGGCATTAGAGCCCCTAGCTTTGTTATTTGCATAGCTGGCATCTGAACTTGAGCACTGTCTAACTAAGGAAATGTGACAT
TCCAACCAGAGCTGTCCCTGAGTTGGAAAAGCTAGGCATTGATGGAGGTAATTACGCAAAACCTCCACATTTGGGGCTAG
GGTAATTACACAATTGGGGGAAATCCCAAATAACCACCGGTTTTGAGGCCTGTGAGTAACATATAGCGGGCTGACACTGT
GCTGAGGATGGGCCTCCTGTGCTTGCCATCAGGCTGCCACTGTGCACGCAGCTGTCGGACCGGTGGAAACTAGGGTGCCA
CGGTCCGGTGGCCTCTGGTTTGACTATCCCCTGGGACATGGTCGACTCCGATGAAAGAAGCCTCGGAAAAGATCGGCCCC
GAGAAGGGTCTGGAAAACGTTGGTCTCAAAGGTTTTGACAGACACCTCTGCCGCTTCAAGAAGGTCCTCCTGGGAGCCAA
AAACCCCGGGAATGGTCTTTGTGGTCCCCCTTGCCTCTCTTCTGCAACATGCAACGATGACTGCCAGGCGGTACGGCAGG
AATCGTTTGAGGGATGGGCATGTACAGAGCTTTTTCCGCCTCCAGTCATCCACATTGGCCATGGGTGGCCCCCGCCTCCG
CGCGTTGCTGCGGGGACAGTACCTTGATATTAATCGTGTTGTACAAAGGTGGAGGCAGAGAAACATCCGCGGGGCAATAC
GCTGCCCCGGGAAGTCATCATCACCCCACGTACCGGCGTGCCATGAACGGCCATACCGCGGTGGTACAAGCTAGGGCCGG
CCTACTAGCTAAAATACTCGACCAATGGGAGCCGCCGCGAGGGCCCTCGAGAGACGGTATAAATAAGGGACGCCGGGAGC
TTGAACAAGGGGAGGAGGAACCAGAAAACACATTGTAACGAGACATCATCCGAAATAAAGAGCAAATGCAGGAGTAAGAT
GTTACACCAATAAGGTGGCCCGAACCTGGGTACTTCTTGCGTGTTCTACTTTCTGTTCTTCCTATCTTCGACCGATCATG
ACCTAGGAAGCTAGACGTCTTCAGTCCCTGGCCGAACTCTCAAAGTGTTGTAGCTAGCAGCACAATGTCCGGCTCTTAGA
CTTCGACAGCAGCCACGCTGCCATGCCATCCTCAACAACGACGGGGCCACTACTGTGGCAATCTCCATCCTCGGTGTCGC
CACGGCAGGACGGTAGCATAGCCGCACCCAGCCTGAGACCGTGCCGACCGTTGCGCGGCCGCGGCAGGATGGTGATGGCG
GCCGTGTCTCATCGGGTCCCGGTTGGTTTGGGCACTAGTGCTGCGCAGCGCTCGGCGTCCACCTCACCATCTGGTTCACT
GGTGCTGCAGACTTTGACGGCCGTGTTGTGTGAAGGACAACATCAGCGCCAATAGGCCAATTAAAAAAAAGCGCCAAGAG
GCCGACCGCACGTAGTTACACGACTCCAGCATCCTTGTCGTGTCCGACGTGTCTGGAAGTGCGCTGTGTCAGAGCTTTGA
CTCCGGAGTGGTGGTTTTGGTTGTGTTTTGGAGAGAGAAGGGGTAGCCGAGGAGAGGAGAGGAGCTTGGATATCATTGGC
TTGATAATACCGGCCCAAACTAGGCTAACTAATGAGAAAAGAAATTGGTATGGATATGATAGTTCCCTTTCCACTGTCAT
TTCTGTGTCCATTAATCGATAAAAATACAAGTTCCAACATTACTGAGTGCAAATAAGAATTGGATATTGTTGGAACATAT
GTATACGGATCAAATGTCTACTTAATCCCGTTAGATGTGACTATCCTACAATTTTGTTGGAGAATGTGTGAAACTTCCTC
AAATGGAAAACTGGAGGCCATACTGATGTTTGCCTTGTAGTGGCAACCAAACACAAATCTTATTTACTCAAATCTACTCA
GAATCCGGATATGATTACATATTTGTATCTGTATCTGATACAATTTGTATTCTAATCCTTTTGATTTGGATGTGGATCTT
GCTTGGCAGATCGTTTGTGCTTTTCCTGTTTACAAATACTGGATAATATTCCCTCCATCCGCAAACAAGTGTACATGTAG
CTTTGTCTAAGTCAAAATTTTAAAACTTTGACGAACTTTATAGGGAAAAGTAGCAGCATTTGTGGCACTAAATTAGTATC
ACTAGATTCGTTTTGAAATGTACTTTCATAATACACCAATTTGATGTTATATATGCCAGTACTCTTTTGTATAAAGTTGG
TCAAAATTTGAAAACTTCGACTTGAGACAAAAGGTAGAAGTGCACTTATTCGCGGACGGAGGGAGTACATATTATCATTT
ACCAGTTTACACCCTTGTTAACTCGATAGTGTTTATCTATGCATAAATAGCATAACTTGGGTCATTCAGAGCCTTGACAG
TACATCTTTATGCACCATGAGGT---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TGCGAATTTATCCTCAGCCTTTGTAAATTTCTAGGCATGTGCCAGGGCCTAGGGGCACACTTGCGTGCGCTGTGTGC
ACGTGTTGCAGTGTGCACGCTTGTGCGTCTACGTTGTGGTTTGAAGAGGGCATAACTTGATCACTTGTAGGATAAAATAC
TATTGACCACA---AATTATAAAAATACATTGCTCATAAATATCTTTCATGTGATGCGTAGTGTCTTGCATTGTCTTTTC
AGTGAAATCAGGGGGTCATTCCTTGCGATTTTCCAACTCAACACATGATTTTGTGCCGTTTGCAGGTAAATCTGGTTGAC
TGGTTAAAAATGATGGTTGCTAGCAGGCGTTCAGAGGAGGTGGTGGATCCCACCATAGAGACACGGCCTTCGACAAGGGT
TCTGAAGCGTGCACTTCTAACAGCTTTGAGGTGCGTGGATCCGGATTCAGAAAAGAGACCGAAGATGGGTCAAGTTGTGC
GGATGCTGGAGTCAGATGACCCAATTCCTCGTGTGGTACGTAATATTTTTTGAAAGAT-AAAAAA-AGCAACTTCATCCT
TGTTTATGTCATGCATGTATTCTTAGTTACTTTCAATTG-TTTTTTTCGATACATTCCATGTGAATGTGTGGTGGGATGG
AACCATTCATTCAATGAACTCACACTTGTTCTCATATATGTTGACCATTGGTTGATTATGATA---CTGAAAGCAG-AAA
AA-TGATGTGAGCAGGACAGAAGATCGAGGCATAACCGC-GGGGGGAGCACCGAAATGGACTCCCAACGGGAGAACTCCG
ACACGGACAAGAGTGACAACCCAGATTCCAAACCAAGCAGGAGCAGAGCATCATCTTCCAAATGAGCACACAAGCATTCA
CATTTCTCCAACAAGCTAGTAACGATGGAAGCTTTGACTAC--AATGGCTGATGAAAAA-CGTGTATTTCGTGTTGTTTC
TGGATGGCTGTAACATTTTTTATGTATGATTTATTTGTAGAGGCTATTGGTTTTCTAGTTTCTACTACCT-AACAATTTA
TTTGTATCTACACCAGTTGT--TGACGATGATGTGCTGCTGTAAGTTGTTAACAGTGCTGTGTACAGT---------TGT
AGGCTCATGAGTACTGGCACAAGAGAGTATCCTGTGTGAATTTAATGGAAAGTTGTTGTCCGTCCACTTTTCAAATAGCC
CTCCCAAATTGCTGGCATTTCATTTCATGAAAAGGCAAAGAGTGAGCAAGCAAGAAGCACATCGTCCATTGCTTTGCTCA
CTAGGAGAGGTCGAGAGGCCACCACA----------------CCTGCCTGCCTGCCCAACGCACAA--------------
--------------------------------------------------------------------------------
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>chr3D_1160
--------------------------------------------------------------------------------
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----------------------------------------AGGACCAGACGAGCATCTGCAAATATCCCAGTCACCCAAA
TCCTTGCCATTTCCAAGGAAATCAAGGAAGTGAGGGTGGAGCAAGTCCCAGCAAGTGACTTTGGGGCGCATGATGGGGTC
CTGCTAACGATCCAGGACAAGCCTAGTGACCGGGAATCGGACAAGGTCATGGTCCATTTGGGTGTAAGAAAATCGAGACA
TGGGGATGAGAGCCCCTCAGGGTCATTCCGTTACATGGACAAGGATGTAGGCTTTCAATCAGCTGAAGAAGGAGGGCCGA
GAACTTTTCGGCAAGCTTCAACTCATGGGATAACCTCCCCTTCAACTTTGGTTGGCTTGCTAGAGTTCTCCTACCTTTTC
TGGGGTCATTGGTTCACTTTGAGGGATTTGGAACTTGCCACCAATCATTTTTGCAA-GATAACATTATTGGTGAGGATGG
ATATGGTGTAGTTTATCGCAGCGAGATCATCAATGGCACTCCTGTTGCTGTCAAAAAGCTTCTTTATAACCTGTAAGACT
TGTATTATCACAATG------------TTACACTGCCCATACATGTTCCTTCGTAACAGAATATCCTGCTTTATATTGAA
C----------CAAATGATGTT-TTTCATCTTGCAGAGGGCAAGCTGAGAAGGAATTCAGAGTAGAAGTTGAAGCTATTG
GTCATGTTCGCCACAAGAACTTAGTCCGTCTTCTTGGTTACTGCGTGGAGGGTACTCAGAGGTACTT-GTACCGTCTTTC
ACTATCATATTCATGTTA----TACCTTTGTTATCATTGATTGCATGTCGCATTCACAAAAGAAAAGGTTGGTTACATAT
CCTTGGTACATGTATTACCAAGCAAATGATT-------------------------------------------------
--------GTATGGAATTCTGTTGCATCATTCCTTACTTCAAGTGACC-TTTCAGGATATTTTTCTATGAATATTTGACC
AATGGAAACCTAGGGCAATGGCTTCATGGAGATATGAGTCACCGGGGCTCCCTTACATGGGAGGCCCACATAAAGATTCT
TCTAGGGACAGGTAAAGCGTAAGTTCTCCCTGGAATGCCCTTTCTTTCTGCTAATGTC-GTGTCATTTATTCTTTATCTT
GCCAATTGG-TAATGCAATCATAAAGGTCCCGAAATTGCATCTTATCTCTACCTGGAACTAATTCCACATTAAATAATAA
TTTCTCTATAACATATTGTCATTCACGATGGAAGTGAGGCTTAAGCTGAACGAGTTCCTAATACCATGTCTATCTTATGT
AACACTTCAATTC------------------------------AATACTTTCATTCAATTCATTGCAGGCATGCTTACTT
GCATGAGGCAATTGAACTGAAAGTCGTGCACCATGATATCAAATCTAGCACTATTTTGATTGATGGTGATTTTGACGCTA
AAGTATCAGATTTTGGTTTAGCCAAGCTTCTTGGTGCCGGTAAGAGTCATGTAACTACT----------------TTGGG
TATGTTGGGCAACTAATGAGCTAGAGTACAGTTACACTATGTTAGTGGTGGTTAATAATGTCCTGCATTTACTCATTGCA
GTTATGTGGCACCAGAATATGCAAACACTAGATTGT-GAATGAGAAAAGTGAC---------------------------
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>chr3B_1162
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------------------------------------------GACCGGACAAGCATATGCAAATATCCCAGTCACCCAAA
TCCTTGCCATTTCCAAGGAAATCAAGGAAGTGAGGGTGGAGCAAGTCCCAGCAAGTGACTTAGGGGCGCATGATGGGGTC
CTGCTAACGATGCAAGACAAGCCTAGTGACCGGGAATCGGACAAGGTCGTGGTCCATTTGGGTGTAAGAAAACTGAGACA
TGGGGATGAGAGCCACTCAGGGTCATTCCGTTACATGGACCAGGATGTAGGCTTTCAATCAGCTGAAGAAGGAGGGTCAA
GAACTTTTCGGCAAGCTTCAACTCATGGGATAACCTCCTCTTCACCTTTAGTTGGCTTGCTAGAGTTATCCTACCTTGGC
TAGGGTCATTGGTTTACTTTGAGGGATTTGGAACTTGCCGCTAACCGTTTCTGCAA-GATAACATAA-TGGTGAGGGTGG
ATATGGTGTAGTTTATCGCGGCGAGATCGTCTGTGGCACTCTTGTTGCTGTCAAAAAGCTTCTCAATAACCTATAAGACT
TGCCTTATCACAATT------------TTACACTGCTCATATATGTTCCTTCGTAACATAACATCCTGCTTTATATTGAA
C----------CAAATGATGTT-TTTCATCTTACAAAGGGCAAGCTGAGAAGGAATTCAAAGTAGAAGTTTAAGCTATTG
GTCATGTTCGCCACAAGAACTTAGTCTGTCTTCTTAGTTACTGCATGGAGGGTACTCATAGGTACTT-GTACCGTCTTTC
ACTGTCATATTCATGTTAATTATACCTTTGTTATCATTGATTACATATCGCATTCACAAAAGAAAAGGTTGGTTACATAT
CCTTGGTACATGTATTACCAAGCAAATGATT-------------------------------------------------
--------GTATGGAGTTCTGTTGCATCTTTCCTTACTTCAAGTGACC-TTTCAGGATACTTGTCTATGAATATTTGAAC
AATGGAAACCTAGAGCAATGGCTTCATGGAGCTATGAGTCACCGGGGCTCCCTTACATGGGAGGCCCGCATAAAGATTCT
TCTAGAGACAGGTAAGGCGTGAATTCTCCTTGGAATGCCCTTTCTTTCTGCTAATGTC---GTCATTTATTCTTTATCTT
GCCAATTGGATAATGCAATCATAAAGGTCCCAAAATTGCATCATATTTCTACCTGGAACTAATTCCACATTAAATAATAA
TTGCTCTATAACATATTGTCATTCCCAATGGAAGTGAGGCTTAAGCTGAACGAATTCCTAATACCATGTTTATCTTATGT
AACACTTCAATTC------------------------------AATACTTTCATTCAATTCATTGCAGGTTTGCTTACTT
GCATGAGGCAATTGAACTAAAAGTCGTGCATCGTGATATCAAGTCTAGCACTACTTTGATTGATGATGATTTTGATGCTA
AAGTATCATATTTTGGTTTAGCCAAGCATCTTGGTGTCGGCAAGAGTCATGTAACTACTCGGGTTATGGGAGCCTTCGGG
TATGTTGGGAAACTATTGAGCTAGAGTACAGTTACACTATGTTAGTGGTGGTTAATAATGTGCCGCATTTACTCATTGCA
GTTATGTGGCACCAGAATATGCAAACACTGGACTGT-GAATGAGAAAAGTGACATTTACAACTTTGGAGTTGTTATTCTA
GAGGAAATTACAGGGAGGGATCCTGTTGACTATGGTCGCTCGACAAATGAGGTATTTGTGAGTTGTCAAAACTTTTTGTT
AGATGTATTCTGCTTCTTTGTAATACCATCAAGTGGCAAGATATGATTAGGACGATAACATTAGGATGCTTCTTATCTGA
AG------------------------------------------------------------------------------
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>chr3A_1167
GACGTAT-------------------------------------------------------------------------
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-----------------------------------------------------CATCTGCAAATATCCAAGTCACCCAAA
TCCCTGCCATTTCCAAGGAAATCAAGGAAGTGAGGGTGGAGCAAGTCCCAACAAGTGACTTTGGGGCGCATGATGGGGTC
TTGCTAATGATCCAAGACAAGCCTAGTGACCGGGAATAGGACAAGGTCATGTTCCATTTGGGTGTAAGAAAATCGAGACA
ATGGGACAAGAGCCACTCAGGGTCATTCTGTTACATGGACAAGGATGTAGGCTTTCAATCAGTTGAAGAAGGAGGGTCAG
GAACTTTTCGACAAGCTTCAACTCATGAGATAACCTCCCCTTCACCTTTGGTTGGCTTGCCAGAGTTCTCCTACCTTGGA
TGGGGTCATTGGTTTACTTTGAGGGATTTGGAACTTGCCACTAACTGTTTTTGCAA-GATAACATTATTGGTGAGGGTGG
ATATGGTGTAGTTTATCACGGCGAGATCGTCAATGGAACTGTTGTTGCTGTCAAAAAGCTTCTCAATAACCTGTAAGACT
TTCCTTATCACAATT------------TTACATTGCCCATATATGTTCCTTCATAATAGAACATCCTGCTTTATATTGAA
C----------CAAATGATGTT-TTTCATCTTGCATAGGGCAAGCTGAGAAGGAATTCAGAGTAGAAGTTGAAGCTATTG
GTCATGTTCGCCACAAGAACTTAGTCCGTATTCTTAGTTACTACGTGGAGGGTACTCAGAGGAACTT-GTACCATCTTTC
ACTGTCATATTCATGTTA----TACCTATGTTATCATTGATTACATATCACATTCATAAAAGAAAAAGTTGGTTACATAT
CCTTGATACATGTATTACCAAGCACAT-----------------------------------------------------
----GATCGTATGGAATTTTGTTGCATCATTCCTTACTTCAAGTGACCTTTTCAAGATACTTGTCTATGAATATAGAGT-
AATGGGAACCTAGAGCAATGGCTTCATGGAGCTATGAGTCATCGGGGCTCCCTTACATGGGAGGCCCACATCAAGATTCT
TCTAGGGACAGCTAAAGCGTGAGTTCTCCCTAGAATGCCCTTTATTTCTACTAATGCC-GTGTCATCTATTCTTTATCTT
GCCAATTGGATAATGCAATCATAAAGGTCCCAAAATTGCATCATATTTCTACCTGGAACTAATTCCACATTAAATAATAA
TTGCTCTATAACATATTGTCATTCACGATGGAAGTGAGGCTTAAGCTGAACGAATTCCTAATACCATGTCTATCCTATGT
AACACTTCAATTC------------------------------AATACTTTCATTCAATTAATTGCAGGCTTGCTTACTT
GCATGAGGCAATTGAATTGAAAGTCG--CACCATGGTATCAAATCTAGCACTATTTTGCTTCATGATGATTTTGGCACAA
AAATATCAGAGTTTGGTTTAG-CAAGCTTCTTGGTGCCGGCAAGAGTCATGTAACTACTCGGGTTATGGAAACCTTTGGG
TATGTTGGGCAACTAATGAGCTACAGTACAGTTACACTATGTTAGTGGTGGTTAATAATGTGTTGCATTTACTCATTGCA
GTTATGTGGCACCAGAATATGCAAACATTGGACTA-TGAATGATAAAAGTGACATTTACAACTTTGCAGTTTTTATTCTA
GAGGCAATTACAAGGAGGGATCCTGTTGACTATGGTCGCTCGACAAATGAGGTATTTGCGAGTTGTAAAAACTGTTTGTT
AGATGCATTCTGCTTGTTTGTAATACCATCAAGTGGCAAGACATGATTAGGACGATTACATTAGGATGCTTCTTATCTCA
AG------------------------------------------------------------------------------
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>chr3D_3330
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------------------AGCCTTTGTAAATTTCTAAGCATGTGC-------TAGGGGCGCACTCGCGCGCGTTGTGTGC
ACGTGTTGCATTGTGCACGCTTGTGCGTCTATGTTGTGGT--GAAAAGTACATGACTTGACCACTTGTAGGATAAAATAC
CATTCACCACACTGAATTATAAAGATACATTGCTCATAAGTATCTTTCATATGATGCTTAGTGTTTTGCATTGTCTCTTC
AGTGAAATCATAGGGTCATTCCTTGTGTTTTTCCAACTCAACGCATGATTTTATGGCATTTGCAGGTAAATATGGTTGAC
TAGTTAAAAATGATGGTTGCTAGCAGACATTCAGAAGAGGTGGTGGATCCCACCATAGAGACACGGTCTTCGACAAGAGT
TCTCAAACGTGTACTTCTAACAACTTTGAAGTGTGTGTATCCGGATTCAGAAAAGAGATTGAAGATGGGTCAAGTTGTGC
GGATGCTGGAGTCAGATGACCCAATTCCTCGTGTGGTACGTAATATTTTTTTAAAGAT-AA-AAA-AGCAACTTCATCCT
TGTTTATGTCATGCATGTATTCTTAATTACTTTTAATTGATTTTTTTCGAAACATTTCATGGGAATGTGTGGTGGGATGG
AACCATTCATTCAATGAACTCAGACTTGGTCTCATA--------------------------------------------
--------------------------------------------------------------------------------
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>chr3B_3332
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--------------------CCTTTGTAAATTTCTAGGCATGTGC-------TAGGGGCGCACTCGCATGCATTGTGTGC
ATGTGTTGCAGTGTGCACGCTTGTGCGTCTACGTTGTGGT--GAAAAGGACATAACTTGACCACTTGTAGGATAAAATAC
CATTGACCACATTGAATTATAAAGATACATTGCTCATAAGTACCTTTCATGTGACACTTAGTGTCTTGCATTGTCTCTTA
AGTGAAATCATAGGGCCATTCCTTGTGCTTTTCCAACTCAACGCATGATTTTGTCGCATTTGCAGGTAAATCTGGTTGAC
TGGTTAAAAATGATGGTTGCTAGCAGACGTTCAGAAGAGGTGGTGGATCCCACCATAGAGACACGACCTTCGACAAGAGT
TCTCAAATGTGCACTTCTAACAACTTTGAGGTGTGTGGATCCGGATTCAGAAAAGAGGTCGAAGACTGGTCAAGTTGTGC
GGATGCTGGAGTCAGATGACCCAATTCCTCGTGTGGTACGTAATATTTTTTGAAAGATAAA-AAA-AGCAACTTCATCCT
TGTTTATGTCATGCATGTATTCTTAATTACTTTTAATTGATTTTTT--GAAACATTTCATGTGAATGTGTGGTGGGATGG
AAC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr3D_3978
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-----------------------------------ATATGTTGACCATTGATTGATTATGATA---CTGAAAGCAG-AAA
AA-TGATGTGAGCAGGACAGAAGATCGAGGCGTAACCCC-GGGGGGAGCACCGAAATGGACTCGCAACGGGACAACTCCG
ACTCTGACAAGAGTGACAACCCAGATTCCAAACCGAGCAGGAGCAGAGAATCATCTTCCAAATGAGCACGCAAGCATTCA
CATTTCTCCAACAAACTAGCAACGATGGGAGCTTTGACTACGAAAGGGCTGATGAGAAAACTAGCATTTCGTGTTGTTTC
TGGATGGTTGTAACA-TTTTTATGTATGATTTATTTGTAGGGGCTATTGGTTT--------CTACTACTT-ATCAATTTA
TCTGTACCTACACCGGTTGTCTT---GACGATGTGCTGCTGTAAGTTGTTAACAGTGCTGTGTACAGTACA----GTTGT
AGGATCATTAGTGGCACTCTT----------GTGTGTGAATTTAATGCAAAGTTGTTGTCCGTCCTTTTTTCAAATAGCC
ATCCCAAATTGCTGGCATTTCAAGG------AAGGCAAAGAGTGACCAAGCAAGAAGCACATCGTCCATTGCTTTGCTCA
CTAGGAGAGGTCGAGAGGCCACCA----TGCC--------TGCCTGCCTAACGTACAACAGCGCGAGCCCCCATCAA-GG
AGGAAGAAAATGAGATCCCACCACACCAGACCACACCAAACCTCACCTCACATCACCACAC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>chr3B_3978
--------------------------------------------------------------------------------
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-----------------------------------ATATATTGACCATTGATTGATTATGATA---CTGAAAGCAG-AAA
AA-TGATGTGAGCAGGACAA---------GCATAACCGCAGGGGGGAGCACCGAAATGGACTCGCAACGGGACAACTCCG
ACACTGACAAGAGTGGCAACCCAGATTCCAAACCGAGCAA-----------------------GAGCACGCAAGCATTCA
CATTTCTCCAACAAACTAGCAACGATGGAAGCTTTGACTACGAAAGGGCTGATGAGAAAACGTGCATTTCGTGTTGTTTC
TGGATGGTTGTAACA-TTTTTGTGTATGATTTATTTGTAGAGGCTATTGGTTTTCTA-------CTACTTAAACAATTTA
TCTGTA-CTACACCGGTTGTCCT---GACGATGTGCTGCTGTAAGTTGTTAACAGTGCTGTGTGCAGTACACCTGGTTGT
AGGATCATTAGTGACACTCTT----------GTGTGTGAATTTAAAGCAA------------------TTTCAAATAGCC
ATCCGAAATTGCTGGCATTTCACGG------AAGGCAAAGAGTGACCAAGCAAGAAGCACATCGTCCATTGCTTTGCTCA
CTAGGAGAGGTCGAGAGGCCACCA----TGCA--------TGCCTGCCCAACGTACAACAGCGCGAGCCCCCGCCAAGGG
AGGAAGAAAATCAGATCCCACCACACCACACCACACA-----AAACCTCACCTCACCACAC-------------------
--------------------------------------------------------------------------------
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>chr3A_3982
--------------------------------------------------------------------------------
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---------------------------------------GTTGACCATTGATTGATTATGATA---CTGAACGCAG-AAA
AA-TGATGTGAGCAGGACAGAAGATCGAGGCATAACCCC-GGGGGGAGCACCGAAATGGACTCGCAACGCGACAACTCAG
ACACTGACAAGAGTGACAACCCAGATTCCAAACCGAGCAGGAGCAGAGCATCATCTTCCAAATGAGCACGCAAGCATTCA
CATTTCTCCAACAAACTAGCAACGATGGAAGCTTTGACTACCAAAGGGCTGATAAGAAAACGTGCATTTCTTGTTGTATC
TGGATGGTTGTAACA-TTTTTATGTATGATTTATTTGTAGAGGCTATTGGTTTTCTA-------CTACTT-AACAATTTA
TCTGTACCTACACCGGTTGTCCT---GACGATGTGCTGCTGTAAGTGGTTAACACTGCTGTGTACAGTACA----GTTGT
AGGATCATTAGTGGCACTCTT----------GTGTGTGAATTTAATGCAAAGTTGTTGTCCGTCCTTTTTTCAAATAGCC
CTCCCAAATTGCTGGCATTTCACGG------AAGGCAAAGAGGGACCAAGCAAGAAGCACATCGTCCATTGCTTTGCTCA
CTAGGAGAGGTCGAGAGGCCACCA----TGCCTGCCTGCCTGCCTGCCCAACGTACAACAGCGCGAGCCCCCGCCAAGGG
AGGAAGAAAATGAGATCCCACCACACCACACCACACCACACCAAACCTCACCTCACCACACAT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>SNPs
---------------------------------------------------S----------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
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---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
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--------------------------------S-----------------------------------------------
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--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------SS------------------------------------S-----
-------------------------S------S------------------------------S----------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S-------------------------S-------------------S-----------S--
-S-------------------------------------S------S------------------------------S--
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----SS--------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
--------------------------SS----------------------------------------------------
-------------------------------------------------------------SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS
>forward_116
--------------------------------------------------------------------------------
----------------TTTGGGAAACGTCGAGCTGT--------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1462
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------TTCATGGAATAACCGCCCCT---------------------------------------
--------------------------------------------------------------------------------
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------
>forward_470
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------AACAACTTGATTGCAGTGATAGATT----------
--------------------------------------------------------------------------------
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------
>reverse_1631
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TAATGGCACTCCTGTTGCTGT-----------------------------
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------
>forward_1462
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GG
GAACTTTTCGTCAAGCTTCAAT----------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_6033
--------------------------------------------------------------------------------
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--------------------------------ATTGTGGTCTGAAGAGGGCA----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>forward_1631
--------------------------------------------------------------------------------
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---------AGTTTATCGTGGCGAGATCGTT-------------------------------------------------
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------
>reverse_6159
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------CC
AGTGAAATCAGGGGGTCA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>forward_6033
--------------------------------------------------------------------------------
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-----------TGTGCACGCTTGTCTGTCTATA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>reverse_7451
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------ATCTCGCTCCTGGAAGACCT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
