>input_sequence_23335
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-----------------------------------------------------------ATGGTGGTGCGGAAGAGGTTG
GATTATGGATCTCGTGGCCACCAGGTTCCCGCCATGCCACGCGTTCCAAGCTCTGCTCGGGTACATACACATTCGATATC
CTGTACTACCTGCCATGACCCTG-CGCAATTTTCGTGCTGGATATTATGTA--TTAACGCCCGGTGATGATTCAGGGGAA
ACGCTCAGCCAGGAGAAAGAAAGATGAGATGTCCCCGTTTGATTTGCTCGCGACCGTCGCAGGAACGCTGTTAGTGGATC
ATGAGAATTCATCTAATAATGCTCCTAGCATCAATGCAGCA---GCTTTGACCTATGCCAGGAAAAGGAAATCAGTTAAA
GCTGAGCAGTGTGATGACGCTCCGCCGCTCAAAAGCATTGCCGTGGAGAGCTGTATAGCGGGTTCTGGTGGTGTGTGTGC
CTCTCCTAGGCAATCTAACATCTGCTTGGCAGAAAACTCGTCGACACGAAATGGTACTGACACAGTGTTAGAGTCACTAA
CCGTGAAACCAGATATGTTGGTTAGGGACTCGGTGTTTAGTTGTACAAAATCATGTAACCGTGCCCATGGTGTTGGCGGA
ATTCCAGAGTGTGGATCTTCACGGTCGCTAGAGGCTACTAATCAAGTGCAGGTGCAGCAACCTATGGACGGTGACACCAC
AGCCTTGTACAGTTTGGTTAGCTCTGTGGATTTGGATGGCAGACCTCCTGCTTTGGTTAGCTCTGACAGTAGCTCAGGAG
TGCCTTTGTGCATCCATGACAAGGACCGCAACACCTCCCCTTTGTGCCATGCTGAAGCGAGGCATGCTGCAGATAGAGAT
GATGACGAAAATTCTTCCGGGTGCACTCATCCATGCACCATGGGAAATAATAAGAGCTATATGCCACAGTATACGGGCGA
TAGCAGGATAAGGAAAATGTTTGCCTCCAAGATAAGGAAGGCAGCTCGTAATAAGATGTGTGGAGAGATGTCCAATAAAG
GTATGGAAATCCTCATCACAAAGTTAACCTTTCGCTTCTCCACAGGCTTCATATTCGCCAC-------------------
-------ATTTTTCCACCACCATTATTGTGGCACTAACTAAATATTGCAGGAATTGGACTAAATAAGGCTATTG---TTT
TTTTTTGTTCAACTAGGTAGCAAGCTAAATTTAGGTGGAAAAAAGATATCCACCACACGCCAAAGAGTACAAAGAGCAAT
GTTCAAGAGGCAAAAGCCAGTGCGCCGTCATTTTACACCATCTTCTGCTAAAGGGATTCTAACTGAAGGTATGCTGCGTC
ACCAATTCACGTTTACCTCGTACGGTGGTACGATTGGTACATTGCACAGAGTCATTGAAACTTGCCTTCTATATGCCATC
TGATAGCCTCAATCCTTATTTTGGTAATACTTCCTAAAAGAAAATGCCGCTTGCCATTTCAGCTAGCGGGGCATCATTTT
CTGTGGAAGGTCAAAATCCATTATGTGGATCTGAGGACTACAATGGTATATTTTGCATAT---A-TAGATTTGTTATATT
CTTCGTTAGCATGAGAG--CTTATTGTATTCCCCCCCT-TCCTTTTTCAGTTAAGCTAAGAATCAAGTCATTCACCATCC
CGGAACTGTTCATCGAGATCCCTGAAAATGCAACAGTTGGTTCATTGAAGGTAAAT-----ACTGGCTTCTAGAAGTTAA
ATGTTTGTTGATATTGCATTAGAAATTGTGTTTGATGAAATGTGCAACAGTT---CTTTGAACTCTGTTTTGCACTCTGT
TCTACATAGTTCTGT-CATAATTAAGGAATGCATAAGTTACTTCCTGTACTTGCTGAGTCCAGAGGTTATGGTTCAATTT
TTTAATTTATAAGCAACGGAACTAATTCATTACACAGTGAAACTTGTCCTCTCATGACAGTTTTAACGTTTTCTTTCTAT
CTAGAATTTCTTGTACGTGACTGATTCCCCTGCAGATAATATTACCTTCTTATGAGTGTTCCCAAGTAATATTCTCCACT
TTCTGTACAGAGGACTGTAATGGACGTTGTTACTAGTATAATTGAAAGTGGCCTCCGGGTTGGTGTTCTTCTTCAAGGAA
AGAGTATTCAAGATGACAACAAGACACTTCGTCAAGCTAGAATTTGCCACGGAGAAAATCTAGAAAACATAGACTTCACA
CTGGAATGTGAAGCTGGGCAAAGCTCTTCCCATGGGGTCAGAATACCAGAGGAAATGGATTTTCATGGTGCAGATGCCAT
GAAACCATTAGCTATGTAAGGCATAATAAAATTATTTCTCGTGCTTTTATATGGCAGTTTTGGTTTAGGAAGACAATTGT
CAAGATGCATCTGATAGTTTCTATAGTATATGTGCGCTCTGGAGCATAAACCAAATCTGAAGACCATTGATGGTTTTGGT
ATCCCATGGTTTGCAGGGTAAAGTGTGAAGAGCCCTTTTCTGAGACCAAGGCCGGTTATAACAACCAGCAGCGTGTGCAG
GCTTCTCCAAACCGTGTTCAGAGCGAACATGGTTCTGTTCATTCTCTTTTTGAAACAACTGCTCACGAAGCATCAGCTAG
CTCACAAGCCATTGTTCCGGTTGCCTCTCCAAGCTCAGAGGCTCTAGCCATTGTGCCTGTTTGCAAGTCAAAGCGGCCCG
CTATTGGGCAAAGACGAATAAGGAGGCCCTTCTCCTTGCCTGAAGTGGAGGCACTAGTGGAAGCTGTTGAACAGCTTGGA
ACAGGAAGGTTCGTGCCCAAATGATT--TCTCTATTGAGTATTGACACAAGGTCATTGCTTCCAACATGTTCTCATATGT
TGGCCTCTTGGTCTGTTTTGTTCAGGTGGAGGGACGTTAAAATGCTCGCGTTCGACAATACTGATCATAGGACCTATGTC
GATCTTAAGGTAATTCAGTAACCGCAGCCTAAAAACGGCTGCCATTGCATTGCTTTTTAT-----------TTCTTTCTG
TTTAACATAGATTGTGAACAGTGAGGATTTTCAAATGTGCTAAACTGTGAAACATTTTGTGGACGAACCAGGACAAGTGG
AAGACCCTGGTGCACACAGCGAGCATATCCCCGCAGCAGAGGCGGGGCGAGCCGGTGCCGCAGGGGCTGCTCGACCGCGT
GCTGGCGGCGCAGGCCTACTGGTCCCAGCAGCAGCAGCAGGTGCTATCAGGCAAGGCTTCAGGACAAGCCTGCTCCTCCA
GCTGCTAA------------------------------------------------------------------------
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-----------------------------------------------------------------
>chr3A_1_TraesCS3A01G528500
GGATTTTGGCGGGCTCGGCAGGGGCCGCTCGAATTATGCTCCCTCCCGGATTTGTTTTGTGCCCGGATTCCGCGAATTAT
GCTCCGCGATTTGGTTTTCTGCGGCCCGATTCCCCTCCCTCCCGGGG-------------CTTGCTTCTTGACCCCGGCG
GATTTGCTCCGTCC---TGTTGCGTGCCGATGCGGACACAGACAGCGCTTCTTGCCCATTTCAGACTTTTTCCCCC-GGG
TTGAATTTCGCGGCGTTCTTGGATGTTCCGTGGTCGCCTCTCCGATTCTTCGGAATCCTGGCAAAAGATTGCCGCCGCTC
TCCTCAATCGGGACTCTGTTCAAGCGGATTT-------------------------------TTTT--GGGGTTTTCCCG
ATTCAGAATTCGGCTCTTCCGATGCAGTTTTTTATTTCTGGATCTGTTTGGCTTGC------------TGATTCAGAATT
TGGCTTCCTTGTTTGGTGCGCCAGCCAAAGAATTTTACTGCATAATAATATAACTACTACT-TTTTTGTTTCAATTCATG
GAGCTGACCGCCAGATTTGT---TCGTGTGTCTTTGATTTCTATT----------TGTTGCAGAAACCGATGAAAAGGAT
TCCTGGGCAGGTGCTCA---TCAATCTTGGGTGACTCGTTTCAGATGCTCCTTGGAGGTGATCTCACTCCCCTATAATAC
CCAATCAATCTCCACCGTTTCTTCCCCTACTATGGCTATGGCAA---------CTCCTCCTCCATCAAACCACCCGGCTT
CAGGTTGCCCTGCCCTGTTGGCATACATACATACATACATACATACATACACAAAACATCTTACAAATTATTATTTCTTT
GCTGGGATTCGATGGAAGACCATGTCTTCCACCCATTTTAGGCTTGCTAATATC-----------TTGCTCTGTTTGGGG
CCAAGCAGTTCCAGCTTTGCCGTTTGAGCAATCAGTAGCCGGGAATCCTCACTGAATTCGATATATTTGTTGCAGATAAA
GCTTATATATGTGCTCGTTTACTGCCTGCGAAAGCCGTCCTTTGGAGTGAGATCAAGACATGGTGGTGCGGAAGAGGTTG
GATTATGGATCTCGTGGCCACCAGGTTCCCGCCATGCCACGCGTTCCAAGCTCTGCTCGGGTACATACACATTCGATATC
CTGTACTACCTGCCATGACCCTG-CGCAATTTTCGTGCTGGATATTATGTA--TTAACGCCCGGTGATGATTCAGGGGAA
ACGCTCAGCCAGGAGAAAGAAAGATGAGATGTCCCCGTTTGATTTGCTCGCGACCGTCGCAGGAACGCTGTTAGTGGATC
ATGAGAATTCATCTAATAATGCTCCTAGCATCAATGCAGCA---GCTTTGACCTATGCCAGGAAAAGGAAATCAGTTAAA
GCTGAGCAGTGTGATGACGCTCCGCCGCTCAAAAGCATTGCCGTGGAGAGCTGTATAGCGGGTTCTGGTGGTGTGTGTGC
CTCTCCTAGGCAATCTAACATCTGCTTGGCAGAAAACTCGTCGACACGAAATGGTACTGACACAGTGTTAGAGTCACTAA
CCGTGAAACCAGATATGTTGGTTAGGGACTCGGTGTTTAGTTGTACAAAATCATGTAACCGTGCCCATGGTGTTGGCGGA
ATTCCAGAGTGTGGATCTTCACGGTCGCTAGAGGCTACTAATCAAGTGCAGGTGCAGCAACCTATGGACGGTGACACCAC
AGCCTTGTACAGTTTGGTTAGCTCTGTGGATTTGGATGGCAGACCTCCTGCTTTGGTTAGCTCTGACAGTAGCTCAGGAG
TGCCTTTGTGCATCCATGACAAGGACCGCAACACCTCCCCTTTGTGCCATGCTGAAGCGAGGCATGCTGCAGATAGAGAT
GATGACGAAAATTCTTCCGGGTGCACTCATCCATGCACCATGGGAAATAATAAGAGCTATATGCCACAGTATACGGGCGA
TAGCAGGATAAGGAAAATGTTTGCCTCCAAGATAAGGAAGGCAGCTCGTAATAAGATGTGTGGAGAGATGTCCAATAAAG
GTATGGAAATCCTCATCACAAAGTTAACCTTTCGCTTCTCCACAGGCTTCATATTCGCCAC-------------------
-------ATTTTTCCACCACCATTATTGTGGCACTAACTAAATATTGCAGGAATTGGACTAAATAAGGCTATTG---TTT
TTTTTTGTTCAACTAGGTAGCAAGCTAAATTTAGGTGGAAAAAAGATATCCACCACACGCCAAAGAGTACAAAGAGCAAT
GTTCAAGAGGCAAAAGCCAGTGCGCCGTCATTTTACACCATCTTCTGCTAAAGGGATTCTAACTGAAGGTATGCTGCGTC
ACCAATTCACGTTTACCTCGTACGGTGGTACGATTGGTACATTGCACAGAGTCATTGAAACTTGCCTTCTATATGCCATC
TGATAGCCTCAATCCTTATTTTGGTAATACTTCCTAAAAGAAAATGCCGCTTGCCATTTCAGCTAGCGGGGCATCATTTT
CTGTGGAAGGTCAAAATCCATTATGTGGATCTGAGGACTACAATGGTATATTTTGCATAT---A-TAGATTTGTTATATT
CTTCGTTAGCATGAGAG--CTTATTGTATTCCCCCCCT-TCCTTTTTCAGTTAAGCTAAGAATCAAGTCATTCACCATCC
CGGAACTGTTCATCGAGATCCCTGAAAATGCAACAGTTGGTTCATTGAAGGTAAAT-----ACTGGCTTCTAGAAGTTAA
ATGTTTGTTGATATTGCATTAGAAATTGTGTTTGATGAAATGTGCAACAGTT---CTTTGAACTCTGTTTTGCACTCTGT
TCTACATAGTTCTGT-CATAATTAAGGAATGCATAAGTTACTTCCTGTACTTGCTGAGTCCAGAGGTTATGGTTCAATTT
TTTAATTTATAAGCAACGGAACTAATTCATTACACAGTGAAACTTGTCCTCTCATGACAGTTTTAACGTTTTCTTTCTAT
CTAGAATTTCTTGTACGTGACTGATTCCCCTGCAGATAATATTACCTTCTTATGAGTGTTCCCAAGTAATATTCTCCACT
TTCTGTACAGAGGACTGTAATGGACGTTGTTACTAGTATAATTGAAAGTGGCCTCCGGGTTGGTGTTCTTCTTCAAGGAA
AGAGTATTCAAGATGACAACAAGACACTTCGTCAAGCTAGAATTTGCCACGGAGAAAATCTAGAAAACATAGACTTCACA
CTGGAATGTGAAGCTGGGCAAAGCTCTTCCCATGGGGTCAGAATACCAGAGGAAATGGATTTTCATGGTGCAGATGCCAT
GAAACCATTAGCTATGTAAGGCATAATAAAATTATTTCTCGTGCTTTTATATGGCAGTTTTGGTTTAGGAAGACAATTGT
CAAGATGCATCTGATAGTTTCTATAGTATATGTGCGCTCTGGAGCATAAACCAAATCTGAAGACCATTGATGGTTTTGGT
ATCCCATGGTTTGCAGGGTAAAGTGTGAAGAGCCCTTTTCTGAGACCAAGGCCGGTTATAACAACCAGCAGCGTGTGCAG
GCTTCTCCAAACCGTGTTCAGAGCGAACATGGTTCTGTTCATTCTCTTTTTGAAACAACTGCTCACGAAGCATCAGCTAG
CTCACAAGCCATTGTTCCGGTTGCCTCTCCAAGCTCAGAGGCTCTAGCCATTGTGCCTGTTTGCAAGTCAAAGCGGCCCG
CTATTGGGCAAAGACGAATAAGGAGGCCCTTCTCCTTGCCTGAAGTGGAGGCACTAGTGGAAGCTGTTGAACAGCTTGGA
ACAGGAAGGTTCGTGCCCAAATGATT--TCTCTATTGAGTATTGACACAAGGTCATTGCTTCCAACATGTTCTCATATGT
TGGCCTCTTGGTCTGTTTTGTTCAGGTGGAGGGACGTTAAAATGCTCGCGTTCGACAATACTGATCATAGGACCTATGTC
GATCTTAAGGTAATTCAGTAACCGCAGCCTAAAAACGGCTGCCATTGCATTGCTTTTTAT-----------TTCTTTCTG
TTTAACATAGATTGTGAACAGTGAGGATTTTCAAATGTGCTAAACTGTGAAACATTTTGTGGACGAACCAGGACAAGTGG
AAGACCCTGGTGCACACAGCGAGCATATCCCCGCAGCAGAGGCGGGGCGAGCCGGTGCCGCAGGGGCTGCTCGACCGCGT
GCTGGCGGCGCAGGCCTACTGGTCCCAGCAGCAGCAGCAGGTGCTATCAGGCAAGGCTTCAGGACAAGCCTGCTCCTCCA
GCTGCTAAAGGAAATCCATCTCTGCCCTGCCTGCCTAGAGAGG---AAAACTGATACTCTGTAAAAAGAAATGTTTAAAG
GAGGTTGACTAATTTTCTGTATTTATTCCAAAACTCACAGATCATTTTATTTTCCTT------TTCTTCTCTATTTGCTG
CTCAGGCCAGGTGCTCTCTTTCCTCTGTCGGTTAATAAGAGATACTAAACGCCTGGTCTCGACGGCCCCTTTGTAAATGA
TTTTATAAACTATTTGGAATGTTTCACTATTTACCAGATGTTCATATAAAAACAGTTCAACATTCCAGTTCTTGCACATT
TTCTCATTACTACATTAATTAGTAATTACACTGTCTTGCATTGGAGTTCTTTTTTCTCCAGAGAAACCGGATTATTGTTT
TTTTTTCCTTCAGAAATATTGGATTATTTTTTTCCCTTG--TGGTTGGATTTGGTAAATTCTACTAGTACTTTTTTACTT
TTTTTAGGAAATGGTACAGTAGTTGCTAGTAAAAAAAA-----TAAGATGAGTTTTTTTGTGAGAAAAAAAGGTGTTAAA
CTGTCCCAACAATTTTTTTTT-GAGCGAGGGCTATATTTTTGCTGGTGAGGCCAGGCTGAATTAGCTAGCCCAGTAGATG
AGGCCCATTAGCCCAACAAGGTCCAGCACTTACCAGTTACCACTCCTCTGCCCCCTCTCCCGAGCCGGCGGCGGCACATG
GGCGGGAGCCTCGCCCAACTGCTCCTCTCATGCCTCGCCGGCGACCGCCTCCGCCGCGTCCTCCCGGCGGCGCACGCCCG
CGCCGTCGTCTCGGGCCTCCTCCCGGACCTCTTCCTCGCCAACCTCCTCCTCCGCGGCTACTCCAAGCTCGGCCGCCTCG
CGGACGCCCGCGCCCTGTTCGACCGAATGCCAGGCCGCAACCTCGTCTCCTGGGGCTCCGCCATCTCCATGTACGCGCAG
CACGGCCGCGAGGACGACGCGCTCGCCCTCTTCGCCGCCTTCCGGGCTGCCGCCGACAACGATGG
>chr3B_73
------------------------------------------------------------------------CGAATTAT
GCTCCGCGATTTGGTTTTCTGGGGCCCGATTCCCTCCCTCCCGGCCATGGCCGGCGGGCGCTTGCTTCTTAACCCCGCCG
GATTCGCTCGGCCCCGTTGTTGCGTGCCGATGCGGGCACACACATCGGTTCTTG-CCATTTCAGACTTTTTCCCCCCGAG
TTGAATTTCACGGTGTTCTTGGATGTTCCGTGTTCGTCTCTCCGATTCTTCCCAGTCGCCGCAATAGATTGCCGCCGCTC
TCCTCAATCGGGACTCTGCTCAGGCT-----------CCCCCCTTGTTCGATGCGGCTGGGATTTATGGGGGTTTTCCCG
ATTCAGAATTCGGTTCTTCCGATGCAGTTTTTTATTTCTGGATCTGCACAACGACTTGCCTTGCCTTTTGATTCAGAATT
TGGCTTCCTTGGTGCGCCTCCGTGCA----------------------TAATAAACATAATCTTTTTGTTTCAATTCATG
GG---------CAGATTTGTGCTTGCTCTGCCTTTGATTTCTAAGTAGTATTTGTT-TTGCAGAAACCGATGAAAAGGAT
TCCTGGGCAGGTGCTCATAATCAATCTTGGGTGACTCGTTTCAGATGCTCCTTGGAGGTGATCTCACTCCCCTATAAAAC
CTCCACCGC--------TTTCTTCCCCTACTATGGCTATGGCTATGGCAACTCCTCCTCCTCCATCAATCCACCCGGCTT
CAGGTTGCCCTGCCCTGTTGGCA----TACATACATACATACACAAAACATGTTATACAGT-----ATTATTATCGCTTT
ACTGGGATTCGACGAAAGGCGAAATTTGATATTTCCGCTCATTCCAGAATTGTTTGTTAGTCTCTTTGCTCTGGTTGGGG
CCAAGCAGTTCCAGCTTTGCTGTTTGAGCAATCATTAGCT-GGAATCCTCACTCAATTCGATACGTTTGTTGCAGATAAA
GCTTATATATGTGCCCGATTGCCGCCTGCGAAAGCCGTCCTTTGGAGTGAGATCAAGACATGGTGGTGCGGAAGAGGCTG
GATTATGGATCTCGCGGCCACCAGGTTCCCGCCATGCCGCGCGTCCCAAGCTCTGCTCGGGTACATACGCATTCGATACC
CTGTACTACCTGCCATGAACC-CCCGCAATTTGCGTGTTGGATATTATGTA--TTAACGACCGGTGGTGATTCAGGGGAA
ACGCTCGGCCAGGAGGAAGAAAGACGAGATGTCCCCGTTTGATTTGCTCGCGACCGTCGCAGGAACCCTGTTAGTGGATC
ATGAGAATTCATCTAAT---GCTCCTGGCATCAATGCAGCAGCAGCTTTGACCTATGCCAGAAAAAGGAAATCAGTTAAA
GCTGAAAAGTGTGATGATGTTCCGCCGCTCAAAAGCATGGCCGTGGAGAACTGTATAGCGGGTTCTGGTGGTGTGTGTGC
CTCTCCTAGGCAACCTAACATCTGCTTGGCAGAAAACTCGTCGACACGAAATGGTACTGACCCAGTATTAGAGTCACTAA
CCGTGAAACCAAACATGTTGGTTAGGGACTCGGTGTTTAGTTGTACAAAGTCATGTAACCGTGCCCATGGTGTTGGCGGA
ATTCCAGAGTGTGGATCTTCACGGTCGCTAGAGGCTACTAATCAAGTGCAGGTGCAGCGACCTCTGGACGGTGACACCAC
AGCCTTGTACAGTTTGGTTAGCTCTGTGGATTTGGATGGCAGGCCTCCTGCATTGGTTAGCTCTGACAGTAGCTCAGGAG
TGCCTTTGTGCATCCATGACAAGGACCGCAACACCTCCCACTTGTGCCATGCTGAAGCGAGGCATGCTGCAGATAGAGAT
GATGACGAAAATTCTTCCGGGTGCACTCATCCATGCACCGCCGGAAATAATAAAAGCTATATGCCACAGTATGCAGGCAA
TAGCAGGATAAGGAAAATGTTCGCCTCCAAGATAAGGAAGGCAGCTCGTAATAAGATGTGTGGAGAGATGTCCAATAAAG
GTATGGCAATCCTCATCACAAAGTTAACCTTTCGCTTCTCCACAGGCTTCGTAGTTGCCAC-------------------
-------ATTTTTCCACCACCATTATTATGGGACTAACTAAATATCACAGGAATTGGACTAAATACGGGCTATTGTTTTT
TTTTTTGTTCAACTAGGTAGCAAGCTAAATTTATGTGGAAAAAAGATATCCACCACACGCCAAAGAGTACAAAGAGCAAT
GTTCAAGAGACAAAAGCCAGTGCGCCGTCATTTTACACCATCTTCTGCTAAAGGGATTCTAACTGAAGGTATGCTGCGTC
ACCAATTCACGTTTACCTCGTACGGTGATACGATTGGTACATTGCACAGAGTCATTGAAACTTGCCTTCTATATGCCATC
TGATAGCCTCAATCCTTATTTTGGTA-TACTTCCTAAAAGAAAATGCCGCTTGCCATTTCAGCTAGCGGGGCATCATTTT
CTGTGGAAGGTCAAAATCCATTATGTGGATCTGAGGACTACAATGGTATATTTTTTGGATATAA-TAGATTCATTACATA
CTTCGTCAGCAAGAGAGAGCTTATCATATATCTATTTTCTCCTTTTCCAGTTAAGCTAAGGATCAAGTCATTCACCATCC
CGGAACTGTTCATCGAGATCCCTGAAAATGCAACAGTTGGTTCATTGAAGGTAAATGCTATACCGGCTTCTAGAAGTAAA
CTGGTTGGTGGTATTGCATTGCGAACTGTGATTGGTGAAATCTGCAACAGTTCTTCTTTGAACTCTGTTTTGTACTCTGT
TCTCCATAGTTCTGTACATAATTAAGGAATGCACAAGTTACTTTCTGTAATTGCTGAGTCGA---------------TTT
CTAAATT--TAAGCAACAGAACAAATTCATTACACAGTGAAATTCGTCCCCTCATGACAGTTTTAAT-------------
--------------------------------------------------------TGTTCCCCGTTAATATTCTTCACT
TTCTCTACAGAGAACTGTAATGGACGTTGTTACTAGTATAATTGAAAGTGGCCTCCGGGTCGGTGTGCTTCTCCAAGGAA
AGAGTATTCAAGATGACAACAAGACACTTCGTCAAGCTAGAATTTGCCACGGAGAAAATCTAGAAAACATAGACTTCACA
CTGGAATGTGAAGCTGGGCAAAACTCTTCCCCCGGGGTCAGAATACCAGAGGAAATGGATTTTCATGGTGCAGATGCCAT
GAAACCATTAGCCATGTAAGGCATAATGAAGTTGTTTCTTGTGTCTTTATATGCTAGTTTTGGTTTAGGAAGACAATTGT
CAAGATGCATCTGACAGTTTCTATAT--TATGTACGCTCTGGAGCATAAACCAAATCTGAAGACCATTGATTGGTGTGGT
ATTCCATGGTTTGCAGGGTGAAGTGTGAAGAGCCTTTTTCTGAGGCCAAGGCCGGTTATAACAGCCAGCAGCGCGTGCAG
GCTTCTCCACACCGTGTTCAGAGCGAGCATGGTTCTGTTCATTCCCTTTTCGAAACGACCGCTCACGAAGCATCTGCTAG
CTCACAAGCCATTGTTCCGGTTGCGTCTCCAAGCTCAGAGGCTCTAGCCATTGTGCCTGTTTGCAAGTCGAAGCGGCCGG
CTATTGGGCAAAGGCGCATAAGGAGGCCCTTCTCCTTGCCTGAGGTGGAGGCGCTAGTGGAAGCCGTCGAACAGCTTGGA
ACAGGAAGGTTCGTGCCCAAATGTTTTCTCTCTATTGAGTATTGACACAAGGTCATTGCCGCAAACATGTTCTCATATGT
CGGCCCCTTGGTCTGCTTTGTTCAGGTGGAGGGACGTTAAAATGCTCGCGTTCGACAATACTGATCATAGGACCTATGTC
GATCTCAAGGTAATTCAGTAACCACAGCCTAAAAACGGCTGCTATTGCATTGCATTGCTTTTAAAAAAAAATTCTTTCTG
TTTAACATAGATTGTGAACAATTAGGATTTTTAAATGTGCTAAAATGTGTGA----------ATGAACCAGGACAAGTGG
AAGACCCTGGTGCACACGGCGAGCATATCCCCGCAGCAGAGGCGGGGCGAGCCGGTGCCGCAGGGGCTGCTCGACCGCGT
GCTAGCGGCGCAGGCCTACTGGTCCCAGCAGCAGCAGCAGGTGATATCAGGCAAGGCTTCAGGACAGGGCTGCTCCTCCA
GCTGCTGAAGGAACACATCT--TGCCTTGCCTGCATAGAGAGGAAAAAAACTGATACTCTGTAAAAA-AAATGTTTAAAG
GAGGTTGACTAATTTTCTGTATTTATTCCAAAACTCACAGGTCATTTTATTTTCCTCTTCTTCTTCTTCTCTGTTTGCTG
CTCAGGCCAGGCGCTCTCTTTCCTCTGTCGGTTAATAAGAGAACCTAAACGCCTGGTCTCGACGGCCCCTTTGTAAATGA
TTTTATAAACTGTTTGGAATGTTTCAATATTTACCAGATGTTCATATAAAAACAGTTCACAATTCCAATTCTTGCACATT
TTCTCATTAAATTAATTATTAT------CACTGTCTTGCATTGATGCTCTTTTTTCTTGATAGAAATTGTATTA-----T
TTTTTTCCTTCGGAAAGATTGGATTATTATTTTTCCTTGAGTGGATGGACTTGGTAATTTCTACTAGTACATTTTCTTAG
GAAATG------------GTAGTTGCTAGTAAAAAACTAAAATTAAGAGGAGTTTTTTTGTGAGAAAAAAT-GTGTTATA
CTGTCCCAACTATTTTTTTTTGGAGCGAGGGCTATATTTTTGTTGCTGAGGCCAGGCTGAACTAGCTAGCCCAGTAGAGG
AGGCCCATTAGCCCAACAACACCCAG-------CAGTTACCAGTCCTCTGCCCTCTCTCCCGAGCCGGCGGCGGCGCATG
GGCGGGAGCCTCGCCCAGCTGCTCCTCTCATGCCTCGCCGGCGACCGCCTCCGCCGCGTCCTCCCGCCGGCGCACGCCGT
CGCCGTCGTCTCGGGCCTCCTCCCGGACCTCTTCCTCGCCAACCTCCTCCTACGCGGCTACTCCAAGCTCGGCCGCCTCG
GGGACGCCCGCGCCCTGTTCGACGGTATGCCGAGCCGGAACCTCGTCTCCTGGGGCTCCGCCATCTCCATGTACGCGCAG
CACGGCCGCGAGGACGACGCGCTCGCCCTCTTCGCCGCCTTCCGGGGCGCCGGCG----------
>chr3D_123
--------------------------------------------------------------------------------
------------------------------------------------------CGGGCGCTTGCTTCTTGACCCCGCCG
GATTCGCTCCGTCCTGTTGTTGCGTGCCGATGCGGACACACACATCGGTTCTTGCCCATTTCAGACTTTTTCCCCG-GAG
TTGAATTTCGCCATGTTCTTGGATGTTCCTTGGTCGCCTCTCCGAATCTTCCCAGTCGTCGCAAAAGATTGC--------
TCCTCAATCGGGACTGCGTTCAAGCTGCAGGTGTGGCCCCCCCTTGTTCGATGCGGTTGAGATTTT--TGGGGTTTCCCG
ATTCAGAATTCGGCTCTTCCGATGAA-TTTTTTATTTCTGGATCTGCACAACGACTTGCCTTGCC----GATTCAGATTT
TGGCTGCCTTGTTTGGTGCGCCAGCCAAAGAATTTTACTGCATAATAGTAGTATATATATACTTTTTGTTTCAATTCATG
GAGCTGACCGCCAGATTTGTGCTTCCTCTGTCTTTGGTTTATTTG----------T-TTGCAGAAACCGATGAAAAGGAT
TCCTGGGCAGGTGCTCA---TCGATCTTGGGTGACTCGTTTCAGATGCTCCTTGGAGGTGATCTCACTCCCCTATAAAAC
CCAATCAATCTCCACCGTTTCTTCCCCTACTATGGT------TATGGCAACTCCTCCTCCTCCATCAATCCACCCGGCTT
CAGGTTGCCCTGCCCTGTTGGCA----TACATACATACATACATACATACACAAAACATCTTACAAATTATTATTTCTTT
GCTGGGATTCGGTGGAAGACCATGTCTTCCACCCATTTTAGGCTTGCTAATATC-----------TTGCTCTGTTTGGGG
CCAAGCAGTTCCAGCTTTGCCGTTTGAGCAATCATTAGTTGGGAATCCTCACTGAATTCAATATATTTGTTGCAGATAAA
GCTTATATATGTGCCCGTTTGCTGCCTGCGAAAGCCGTCCTTTGGAGTGAGATCAAGACATGGTGGTGCGGAAGAGGTTG
GATTATGGATCTCGTGGCCACCAGGTTCCCGCCATGCCACGCGTTCCAAGCTCTGCTCGGGTACATACACATTCGATACC
CTGTACTACCTGCCATGACCCCCCCGCAATTTGCGCATTGGATATTATGTATTTTAACGACCGATGGTGATTCAGGGGAA
ACGCTCGGCCAGGAGAAAGAAAGACGAGATGTCCCCGTTTGATTTGCTCGCGACCGTCGCAGGAACGCTGCTAGTGGATC
ATGAGAATTCATCC---AATGCTCCTAGCATCAATGCAGCG---GCTTTGACCTATGCCAGGAAAAGGAAATCAGTTAAA
GCTGAGCAGTATGATGACGTTCCGTCGCTTAAAAGCATTGCCGTGGAGAACTGTATAGCAGGTTCTGGTGGTGTGTGTGC
CTCTCCCAGGCAAGCTAACATCTGCTTGGCAGAAAACTCGTCGACACGAAATGGTACTGACCCAGTGTTAGAGTCACTAA
CCGTGAAACCAGATATGTTGGTTAGGGACTCGGTGTTTAGTTGTACAAAATCATGTAACCGTGCCCATGGTGTTGGCGGA
ATTCCAGAGTGTGGATCTTCACGGTCGCTAGAGGCTACTAATCAAGTGCAGGTGCAGCAACCTATGGATGGTGACACCAC
AGCCTTGTACAGTTTGGTTAGCTCTGTGGATTTGGATGGCAGACCTCCTGCTTTGGTTAGCTCTGACAGTAGCTCAGGAG
TGCCTTTGTGCATCCATGAAAAGGACCGCACCACCTCCCCCTTATGCCATGCTGAAGCGAGGCATGCTGCAGATAGAGAT
GATGACGAAAATTCTTCCGGGTGCACTCATCCATGCACCACGGGAAATAATAAGAGCTATATGCCACAGTATACAGGCGA
TAGCAGGATAAGGAAAATGTTTGCCTCCAAGATAAGGAAGGCAGCTCGTAATAAGATGTGTGGAGAGATGTCCAATAAAG
GTATGGCAATCGTCATCACAAAGTTAACCTTTTGCTTCTCCACAGGCTCCATAGTTTCCATAAACTAGAGAAGCATATGT
CTTTTAAATCTTTCTACCACCATTATTATGGGACTAACTAAATATTGCAGGAATTGGACTAAATAAGGGCTATTGTTTTT
TTTGTT---CAACTAGGTAGCAAGCTAAATTTATGTGGAAAAAAGATATCCACCACACGCCAAAGAGTACAAAGAGCAAT
GTTCAAGAGACAAAAGCCAGTGCGCCGTCATTTTACACCATCTTCTGCTAAAGGGATTCTAACTGAAGGTATGCTGCGTC
ACCAATTCACGTTTACCTCGTACGGTGATACAATTGGTACATTGCACAGAGTCATTGAAACTTGCCTTCTATATGCCATC
TGATAGCCTCAATCCTTATTTTGGTA-TACTTCCTAAAAGAAAATGCCGCTTGCCATTTCAGCTAGCGGGGCATCATTTT
CTGTGGAAGGTCAAAATCCATTATGTGGATCTGAGGACTACAATGGTATATTTTGGATAT---AATAGATTCATTACATG
CTTCGTCAGCAAGAGAA--CTTATCATATATCTATTTTCTCTTTTTCCAGTTAAGCTAAGAATCAAGTCATTCACCATCC
CGGAACTGTTCATCGAGATCCCTGAAAATGCAACAGTTGGTTCATTGAAGGTAAATGCTATACTGGCTTCTAGAAGTAAA
CTGGTTGGTGATATTGCATTGTGAACTGTGATTGGTGAAATCTGCAACAGTTCTTCTCTGAA------------CTCTGT
TCTACATAGTTCTGTACATAATTAAGGAATGCACGAGTTACTTTCTGTAATTGCTGAGTCGAGAGGTCATGGTTAGATTT
CTAAATT--TAAGCAACAGAACAAATTCATTACACAGTGAAAATTCTCCCCTCATGACAATTTTAAT-------------
--------------------------------------------------------TGTTCCCCATTAATATTCCTCACT
TTCTCTACAGAGAACTGTAATGGACGTTGTTACTAGTATAATTGAAAGTGGCCTCCGGGTCGGTGTTCTTCTTCAAGGAA
AGAGTATTCAAGATGACAACAAGACACTTCGTCAAGCTAGAATTTGCCACGGTGAAAATCTAGAAAACATAGACTTCACA
CTGGAATGTGAAGCTGGGCAAAACTCTTCCCCCGGGGTCAGAATACCAGAGGAAATGGATTTTCATGGTGCAGATGCCAT
GAAACCATTAGCCATGTAAGGCATAATGAAGTTGTTTCTTGTGTCTTTATACCGTAGTTTTGGTTTAGGAAGACAATTGT
GAAGATGCATCTGACAGTTTCTATAT--TATGTACGCTCTGGAGCATAAACCAAATCTGAAGACCATTGATGGTTTTGGT
ATCCCATGGTTTGCAGGGTAAAGTGTGAAGAGCCCTTTTCTGAGACCAAGGCCGGTTATAACAGCCAGCAGCGTGTGCAG
GCTTCTCCAAACCGTGTTCAGAGTGAACATGGTTCTGTTCATTCTCTTTTCGAAACGACCGCTCACGAAGCATCAGCTAG
CTCACAAGCCATTGTTCCGGTTGCCTCTCCAAGCTCAGAGGCTCTAGCCATCGTGCCTGTTTGCAAGTCAAAGCGGCCCG
TTATTGGGCAAAGACGCATAAGGAGGCCCTTCTCCTTGCCTGAGGTGGAGGCGCTAGTGGAAGCCGTCGAACAGCTTGGA
ACAGGAAGGTTCGTGCATGAATGATT--TCTCTCTATTGACACT----AAGGTCATTGCTGCAAACATGTTCTCATATGT
TGGCCTCTTGGTCTGCTTTGTTCAGGTGGAGGGACGTTAAAATGCTCGCGTTCGACAATACTGATCATAGGACTTATGTC
GATCTCAAGGTAATTCAGTAACCAC-----------------TATTGCATTGCTTTTTAT-----------TTCTTTCTG
TTTAACATAGATTGTGAACAGTGAGGATTTTCAAATGTGCTAAACTGTGAAACATTTTGTGGATGAACCAGGACAAGTGG
AAGACCCTGGTGCACACGGCGAGCATATCGCCGCAGCAGAGGCGGGGCGAGCCGGTGCCGCAGGGGCTGCTCGACCGCGT
GCTGGCAGCGCAGGCCTACTGGTCCCAGCAGCAGCAGCAGCAGCTCTCAGGCAAGGCTTCAGGACAGGGCTGCTCCTCCA
GCTGCTGAAGG-AATCCTTCTCTGCCTTGCCTGCCTAGAGAGGAAAAAAACTGATACTCTGTAAAAAAAATTGTTTAAAG
GAGGTTGACTAATTTTCTGTATTTATTCCAA-ACTCACAGGTCATTTTATTTTCCCT---TTCTTCTTCTCTGTTTGCTG
CTCAGGCCAGGTGCTCTCTTTCCTCTGTCGATTAATAAGAGAAACTAAACGCCTGGTTTCGACGGCCCCTTTGTAAATGA
TTTTATAAACTATTTGGAATGTTTCAGTATTTACCAGATGTTCATATAAAAACAGTTCAACATTCCAGTTCTTGCACATT
TTCTCATTACTACATTGATTATT-ATCACACTGTCTTCCATTGCAGTTTTTTTTTCTTGAGAGAAATCGGATTATTGTTC
-TTTTCCCATCAGAAAAATTGGATTATTATTTCTCCTTGAGTGGTTGGATTTGGTAATTTCTACTAGTACTTTTT-----
---TTAGGAAATGGTACAGTAGTTGCTAGTAAAAAAATAAGAAGAGT-----TTTTTTTGTAGGAAAAAAT-GTGCTATA
CTGTCCCAGCTATATTTTTTTTGAGCGAGGGCTACATTGTAGTTAGTGAGGCCAGGCTGAATTACCTAGCCCAGTGGATA
AGGCCCATTAGCCCAACAACATCCAGCAGT------TTACCACTCCTCTGCCCCGTCTCCCGAGCCGGCGGCGGCACATG
GGCGGGAGCCTCGCCCAGCTGCTCCTCTCATGCCTCGCCGGCGACCGCCTCCGCCGCGTGCTCCCGCCGGCGCACGCCCG
CACCGTCGTCTCGGGCCTCCTCCCGGACCTCTTCCTCGCCAACCTCCTCCTCCGCGGCTACTCCAAGCTCGGCCGCCTCG
GGGACGCCCGCCGCCTGTTCGACCGGATGCCCGGCCGTAACCTCGTCTCCTGGGGCTCCGCCATCTCCATGTACGCGCAG
CACGGTCGCGAGGACGACGCGCTCGCCCTCTTCGCCGCCTTCCGGGGTGCCGCCGCCAACAATG-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
---------------------S------------SS--SS--S-SSS------------------------------S--
----S-----------------------------------S---S--S------------------------------S-
-------------S-------------------------------------SS-S--S-S--------------------
-------------------------S-SSSS-------------------------------------------------
----------------------------------------------SSSSS-SSSS------------------------
-----------------------------------------------S--SS-SSSS--S--------------------
-------------------------S-S----------------S-----------S-----------------------
-----------------------------------------------------------------------------S--
------------------------------------------S-------------------------S-----------
-----------------------SSSS-----------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S----S----------------------------------------
--------------S-----S-----------------------------------------------------------
------------------------------------------------------------------------------S-
---------------------SS---------S----S---------------------S------S-------------
------S-----------------S-------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S-----------------------------S------------------------------
-------------S-----------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
----------------------------------------S---------------------------------S-----
--------------------------------------------------------------------------------
------S----------------------------------------------S-S------------------------
---------------------------S---S------------------------------------SSSS-S------
---------------------------------S----------------------------------------------
---------S----------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------S-----------------------------------------------------
-------------------------------------------------------S---------------SS---S--S
------S----S------------SS---SS-SSSSS---------S---------------------------------
-----------------------------------------------------------------------------S--
S--S---S------------SSS--S----S---S------S------------------------------S-------
---------------------------------S---------S-----S----------S------S------SS----
S-S----SS--------S----S-------------------S------S----------------SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S-S---------S----
----S-------S-----------------------------------------------S-------------------
--------------------------------------------------------------------------------
----------------------S--------SS-----------------------------------------------
------------S--------------S--S--S-----S---SS---------S-------------------------
--------------S----------SSS-----S----------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------S-----S--S--------------------
--------------------------------------------------------------------------------
----------------S--------------------------S--------S-----------S--S------------
------------------------------------------------------------S-S-----------------
---------------S----------------------------------------------------------------
-----S-----------------S------------------S-------------------------------------
---------------------------------------------------------------S----------------
-----------------S--------------------------------------------------------------
------------------------------------------------------------------S-S-----------
------S----------S--------S----------------------------------------S------------
----------------------------------------S-------------------------------S-------
------------------------------------------S-------------------------------------
--------------------------S-----------------------------------------------------
----------------S----S-S--S----------------S-------------SS-------S-------------
----------------S-----------S----S-----------------------S-----------------SSSSS
SSS----------------------------------S----------S---------------------SS------S-
----------S-------------------------------S-------------------------------------
-------------------SS-------S-SSS-----------------------------------------------
-----------------S------------------------------------------------S-------------
--------------------------------------------------------------------------------
S------------------------S-----S-----S------------------------------------------
----------------------------------------------S--------S----S---S
>forward_44
------------------------CCGCTCGAATTATGCTCCCT------------------------------------
--------------------------------------------------------------------------------
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>reverse_2136
--------------------------------------------------------------------------------
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-------------------------------------------------------CGCCACATTTTTCCACCACC-----
--------------------------------------------------------------------------------
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>forward_1961
--------------------------------------------------------------------------------
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---------------------TGCACTCATCCATGCACCAT---------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_3054
--------------------------------------------------------------------------------
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-------------TACGTGACTGATTCCCCTGC-----------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>forward_2428
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------ACGTTTACCTCGTACGGTGG----------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4144
--------------------------------------------------------------------------------
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---------------------------------------------------------------CGAACCAGGACAAGTGG
AAGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>forward_3313
--------------------------------------------------------------------------------
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-------------CTGGGCAAAGCTCTTCCCAT-----------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4993
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--------------------------------CCAGTTACCACTCCTCTGCC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
