>input_sequence_23297
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TGGCCGCCGTCTCGACGGCCCAAATCCTCCCATTCCTCACCACCTCCACTTTCCAGTCCTCGCTTCTCTTCCCGCCCACA
GCACGGCGGGCCCCAACCTCGCTGACCTACGCCGACCGCCCTGCTCCCGCCGTCGCGTCCTGTCCTCGCCCCGGTGGAAC
CCACAGGACTCAGGCTTTCCAGCCCGTTCTCCCTGCCTGTGCTGCCGTTTCATACTCCTCGTCGAGCGCGGCAGAAGGTA
CTGTG-GTAATCAAATAGGGGCTGTG-----CTGTTGGCTTGAGCTCTTG---TAATTGTGA-------------GCTTT
TGAAGGGGATGAAGGCATGTCTGACCCGGAGCTGAGGCTGGTGCTGGAGCTTGCAACCGACGAGGAGCTGCTGGAACTGG
AGGAGATCCTCTATGGTACCAGGTCTGGCGCTCGAGCTTACTGATTGTTCCAATGCTGTTTACTGCTTAGCACTGAGATA
ACTGATTGTTTGGTTTGGATCATAGTGATGGGTTTCACGAGACAGAGTTGAATTCGCTAGTTTGGAGTTTCGTTAATAGT
GTGCATATATAATCTGCTGCGATGTACTAGTTGTTTTGGACTTTTTGGCTGCCTCTTTTGGTTCCTA-CGTTGGTTATGA
CGGTAAGCATGCTTTGCTGCAGAATTAGTCAAATATATCTAGTTGCTTGTAAATATAGTGCACGATTACAAAGTAGTAAC
GCTAACCGCATTCAAATTATGGACAAAGAGGATCAGATCTGTGAATTTACACAGAATAGTGTTACTTTTGTTTTAGAAAT
AATTTAATTAAACTCTTTGGCAAAAGAGTTAATTATGGTCAAAGAGGATCAGATCTGTGAATTTACTTTTGTAATGCTAA
CTAGATCATATTTATTTGGAAATGATTAAAATTTCATCTCCTTTGTTTCTTTTTCCATCTACTGATTTTTGAAACCATCA
TGGTTTTTCTCTTGCGTTTTCTTTATTGTGCTGACTGATTCAGTTAGACCTGATCACTTTCCTGTGTTCGCATAATGGGA
CTGCCACAAAAAGCTGTGGCGCAATATCTACCTGTCATAATATTCCAATGTTTCACATTGTGAGCATAAGCTTTGGTTCT
GTGTCTCCTTATTCTGCAGCTATTTCAGCCCAGTGCTAAAATCAATTGCAAAAAGGCCGAACACCATTTCTGTTGTTGCT
TTGGATGATATCGAGGAGAGAGATCTTTTCATCTCAAAATTGGAGTCGAGGTTCTTGTATCTTGCTGCAGATGCACGCTC
TGTTCTAAGGTCAGTCAAGTAGGCTTTTATCCCTGTATCAT-CAAAAATGTATACCTGATTAGATTAATTACCCTGTAGA
AGTCGACCTGATATGGTTTGCCACATTTTTGAACGTTTTGTACTTGTACAATTGTTCTTCGTAGGGGCTGGAGGCCATCA
TACAGGAATGTCTTACTTCAAGTAAGAAGAGAACTTGGTGTTCAGTGCTCCAGTAAATTATGTAGTGCAGACCTGGAGGC
AGAAATATTTCTACACCTCCTGGATGAATATTCGAGGTATATACATTTAA-TTT-GGGAAGTATAAGGATGCCCGAACAC
AAATTTCCCTGGGAT--------ATAGTTGTAAACTATGTAACTAGATACGCTGCAATCTG-TTTCCTTTTAAACGG--A
TATATAGTTATATACACTGCAATCTATTAACTAGTAATCGACACTATTGCAGTTTCATATTCATTAATTTCTTTTGTGTT
TGAA-ACTTCTAAGACCTATACTCTCTCTTTGCCACTCTAGTGGTCTTGAATACTAAATTGTTTCTGCATTTAGCCGTCA
GAAAGGATCATTTTCATTTCCATGGGATAAGCAGAAATCTCCAAAAGAAAACCCTAGCATTGAAGTAAACAACTGGAAGG
TGCTTACTGACGCTGCTTGGAGGATTGGAGCAAAGGGACTAGAAAGTACATTCTTGAAGGTTATTTGTGGTTACTTCTTC
TCATTTCTTTGTGACCTTTCACTTCTTTGGCTAATTTCATTTGTTCTTTGATATGGAAGGGTGGCAGTGCATTGACCGTG
AAAACAATCTATGAATCGGTATGAAAT-ACAGTTTATTTGTTGGAAGATCAAATTCTGCTACTTCTAGTTCTCACAACAC
CGTTGTTTATTAATGTTACTTACCATTATGGTAGTTAGCCAAGAGACTATCTGGAAAGCTGCTGATGGAGACAGCTAATT
ATGAGATTAAGAAAGAACTTGTTAAGCAGGTATACCTATTTTAATTGATTCTTTTGGTTTGTTGCTCCTGAATCTCTAAT
TATGTTGTGGCCATCGCTAGCGCAATAGATAGAACTTCATATCTGCGTTTGCCTAGTATAAGCTCTTGTTCTATTTCCCC
ATCTGGAAAATGCATTGGCAAAGCTTGATATTTAGACCAAC-GTGTTTGCATGCTACAACTGATATTCACTACTATCTTA
ATATAATATCCTCCAGAAGTAATGTCTTTACCTTTTCCAGGGTGGCCGATTAGCTGCTGTTAACCTTGAATCCAGAGCTG
GCTTTCTTGCAGCTAGGCAGGTAATACCATCTTTTTATCTTCATTCTATTCCTCGGTGAGCTAGTATGCCCGAAGTGTGT
AGGAGGCAGCTGCTTTTGTACATCAATATTGGCATTGTACCCACGTTTTTTTGTCGAAGATCGTACATACAGATGTCAAG
TTTTAACAGTCCTCTTGAATGTATGCAGGGTTTGGCTCGTGCAGCATCTAGATATGTTGGCCTTAGGAGTTTCATGAGTT
TACTTGGACCAATGTATGTTTATTCTAATATTCTCTAGTATATTTTCATAAACCTTTCCTTGCTGTTACCGCCTTATTTT
TCTTCCTGTCAATATCTATCTTACACCATGATCTGATCAAATTAAATTCCCCT----TTGCACATGGAGTATTTTGCCTG
TAAGTCGCCTACTAACTGTTCTGTGCTTACACTTGACTGTCACACAGAATGTGGGGCACACTCTTGGCTGATATTGTGAT
CCAAATGCTTGGGACAGATTATGCTAGGATCGTGCAAGCAATCTACGCTTTTGCTCAGGTGAGGTTCACTTTATCTCCTT
GTTTA-GTCTCAGCAGCTGCATTGATGCATACGTCGCCTTCCTTACAGATTCGGCTCACTCGGTCGTGTTACCTAGAATC
TATTGAAGAATGA-------------------------------------------------------------------
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>chr5B_1_TraesCS5B01G232000
TTGGCATTAAATGTCAAAATTTCGCAACCATTCTAAAAAAGCTAAATTTATTTCCCTAAAGCCAATTC-AAGAACAACAC
ATAAAACATAGTGTGAACATGCAGAGCGTGGCCTTAGGAAACGATATACACGTGGCCTATCATGCAGCAATATGCGAGTG
ATCACAACTTAAAGGCCGTGTTGCCAGCTGGGTGCAAGTTCGGTCATATGCC--GGATGCCAACCCTAGGAACAAACTAA
AACATATATATTATGAGCT-------------------------------------------------------------
-----------------------------CCATGGCCGTGCCAAAATAGATACTCCATCTGATCCATATTAATTGTCGCT
CGTGCTAAGTGAGCGACAATTAATATATA--------------TCTTTCTCCTGTTCATGCCATTGCAAGGAAACAAT--
--------AAGTTTATTCGGACTTGGAGTTGTGTTTGTCATCGACACGTCTGGGCATGTTGTTATGACTCTCATCTTTTA
TTTTTCTAAATTAATAACCTGGCAGTCCTCTTCAAATAGATTGAACCCATTAGACTCTGGTCTAAAAACAAAATTT--TC
TTGTTAAATACTTATTTTTATATCTTAAAATTTTCTTGTTAAATACTTATTTTATATCTCAAAATTAATAACATGGCAGT
CCTCTTCAATCGTATTTACTTTATTTTATACTTTAAATTTTTTTACTCTTTTTTTAACATTAGTACAGACACACACGCTC
ATATATACGCGCATACATTCATCCCTATGAACGCGCGCACACACTCTATCCATATGAGCACATTCGAAAGACTGATTGAT
TTAAACACTGATGGGCTGGGGATATCACAGTCCCTTTAACCATCCAATCACAGATTGATTCGCTATTTTTTTTTAAATCC
GTAATTGTCTTTGCCATTTGCCATGAAACTGGGAAAACCATACGATTTCCATGTGTGTCGTGGCCGTATCTTATACAGGT
GTGCTCCACAAAACCTCGTCGCGGGTCTGGATTTTGGACCACCCACCGAACCGCCCGCCGGCGATAGCAGCCGCCGCCAA
TGGCCGCCGTCTCGACGGCCCAAATCCTCCCATTCCTCACCACCTCCACTTTCCAGTCCTCGCTTCTCTTCCCGCCCACA
GCACGGCGGGCCCCAACCTCGCTGACCTACGCCGACCGCCCTGCTCCCGCCGTCGCGTCCTGTCCTCGCCCCGGTGGAAC
CCACAGGACTCAGGCTTTCCAGCCCGTTCTCCCTGCCTGTGCTGCCGTTTCATACTCCTCGTCGAGCGCGGCAGAAGGTA
CTGTG-GTAATCAAATAGGGGCTGTG-----CTGTTGGCTTGAGCTCTTG---TAATTGTGA-------------GCTTT
TGAAGGGGATGAAGGCATGTCTGACCCGGAGCTGAGGCTGGTGCTGGAGCTTGCAACCGACGAGGAGCTGCTGGAACTGG
AGGAGATCCTCTATGGTACCAGGTCTGGCGCTCGAGCTTACTGATTGTTCCAATGCTGTTTACTGCTTAGCACTGAGATA
ACTGATTGTTTGGTTTGGATCATAGTGATGGGTTTCACGAGACAGAGTTGAATTCGCTAGTTTGGAGTTTCGTTAATAGT
GTGCATATATAATCTGCTGCGATGTACTAGTTGTTTTGGACTTTTTGGCTGCCTCTTTTGGTTCCTA-CGTTGGTTATGA
CGGTAAGCATGCTTTGCTGCAGAATTAGTCAAATATATCTAGTTGCTTGTAAATATAGTGCACGATTACAAAGTAGTAAC
GCTAACCGCATTCAAATTATGGACAAAGAGGATCAGATCTGTGAATTTACACAGAATAGTGTTACTTTTGTTTTAGAAAT
AATTTAATTAAACTCTTTGGCAAAAGAGTTAATTATGGTCAAAGAGGATCAGATCTGTGAATTTACTTTTGTAATGCTAA
CTAGATCATATTTATTTGGAAATGATTAAAATTTCATCTCCTTTGTTTCTTTTTCCATCTACTGATTTTTGAAACCATCA
TGGTTTTTCTCTTGCGTTTTCTTTATTGTGCTGACTGATTCAGTTAGACCTGATCACTTTCCTGTGTTCGCATAATGGGA
CTGCCACAAAAAGCTGTGGCGCAATATCTACCTGTCATAATATTCCAATGTTTCACATTGTGAGCATAAGCTTTGGTTCT
GTGTCTCCTTATTCTGCAGCTATTTCAGCCCAGTGCTAAAATCAATTGCAAAAAGGCCGAACACCATTTCTGTTGTTGCT
TTGGATGATATCGAGGAGAGAGATCTTTTCATCTCAAAATTGGAGTCGAGGTTCTTGTATCTTGCTGCAGATGCACGCTC
TGTTCTAAGGTCAGTCAAGTAGGCTTTTATCCCTGTATCAT-CAAAAATGTATACCTGATTAGATTAATTACCCTGTAGA
AGTCGACCTGATATGGTTTGCCACATTTTTGAACGTTTTGTACTTGTACAATTGTTCTTCGTAGGGGCTGGAGGCCATCA
TACAGGAATGTCTTACTTCAAGTAAGAAGAGAACTTGGTGTTCAGTGCTCCAGTAAATTATGTAGTGCAGACCTGGAGGC
AGAAATATTTCTACACCTCCTGGATGAATATTCGAGGTATATACATTTAA-TTT-GGGAAGTATAAGGATGCCCGAACAC
AAATTTCCCTGGGAT--------ATAGTTGTAAACTATGTAACTAGATACGCTGCAATCTG-TTTCCTTTTAAACGG--A
TATATAGTTATATACACTGCAATCTATTAACTAGTAATCGACACTATTGCAGTTTCATATTCATTAATTTCTTTTGTGTT
TGAA-ACTTCTAAGACCTATACTCTCTCTTTGCCACTCTAGTGGTCTTGAATACTAAATTGTTTCTGCATTTAGCCGTCA
GAAAGGATCATTTTCATTTCCATGGGATAAGCAGAAATCTCCAAAAGAAAACCCTAGCATTGAAGTAAACAACTGGAAGG
TGCTTACTGACGCTGCTTGGAGGATTGGAGCAAAGGGACTAGAAAGTACATTCTTGAAGGTTATTTGTGGTTACTTCTTC
TCATTTCTTTGTGACCTTTCACTTCTTTGGCTAATTTCATTTGTTCTTTGATATGGAAGGGTGGCAGTGCATTGACCGTG
AAAACAATCTATGAATCGGTATGAAAT-ACAGTTTATTTGTTGGAAGATCAAATTCTGCTACTTCTAGTTCTCACAACAC
CGTTGTTTATTAATGTTACTTACCATTATGGTAGTTAGCCAAGAGACTATCTGGAAAGCTGCTGATGGAGACAGCTAATT
ATGAGATTAAGAAAGAACTTGTTAAGCAGGTATACCTATTTTAATTGATTCTTTTGGTTTGTTGCTCCTGAATCTCTAAT
TATGTTGTGGCCATCGCTAGCGCAATAGATAGAACTTCATATCTGCGTTTGCCTAGTATAAGCTCTTGTTCTATTTCCCC
ATCTGGAAAATGCATTGGCAAAGCTTGATATTTAGACCAAC-GTGTTTGCATGCTACAACTGATATTCACTACTATCTTA
ATATAATATCCTCCAGAAGTAATGTCTTTACCTTTTCCAGGGTGGCCGATTAGCTGCTGTTAACCTTGAATCCAGAGCTG
GCTTTCTTGCAGCTAGGCAGGTAATACCATCTTTTTATCTTCATTCTATTCCTCGGTGAGCTAGTATGCCCGAAGTGTGT
AGGAGGCAGCTGCTTTTGTACATCAATATTGGCATTGTACCCACGTTTTTTTGTCGAAGATCGTACATACAGATGTCAAG
TTTTAACAGTCCTCTTGAATGTATGCAGGGTTTGGCTCGTGCAGCATCTAGATATGTTGGCCTTAGGAGTTTCATGAGTT
TACTTGGACCAATGTATGTTTATTCTAATATTCTCTAGTATATTTTCATAAACCTTTCCTTGCTGTTACCGCCTTATTTT
TCTTCCTGTCAATATCTATCTTACACCATGATCTGATCAAATTAAATTCCCCT----TTGCACATGGAGTATTTTGCCTG
TAAGTCGCCTACTAACTGTTCTGTGCTTACACTTGACTGTCACACAGAATGTGGGGCACACTCTTGGCTGATATTGTGAT
CCAAATGCTTGGGACAGATTATGCTAGGATCGTGCAAGCAATCTACGCTTTTGCTCAGGTGAGGTTCACTTTATCTCCTT
GTTTA-GTCTCAGCAGCTGCATTGATGCATACGTCGCCTTCCTTACAGATTCGGCTCACTCGGTCGTGTTACCTAGAATC
TATTGAAGAATGACCAGAGCAGAATCATCACTGGACAAGCCTAACTGGGTGCTCCGATCTTGTCTACCATTACAGCTCCA
TAGTGTACATTCTGATCACGCAGATCATTCCCGGTCGCGGTACTCCATGGTAAGCTCTGCGGCTTTTTGCAGAGCATAGA
TAACAGAGCAATTGGCAGATGGTAGGTAGCAAGGACAGATAAGAACAGCAGCATTTTCACCGCTTTGAATTTCAGAAGGC
CCATAGCTGCTTCATGTGTGGGAATTTGATTGTGAAGCTTAGGAAAAACAGCATGGTGTCAGGATTGAAACTGTGTATTA
GTAGTACTAGTA---CTTGACAAATAGCTCACGATAGCCATTTGGGCCACCTACTCTCCGAAGGCGGTAGTTGCGGATGA
ATATACATCGACTTCACACTTCCACGGGGTGCCGAAGTTGTAGAACATGCATTCCATTCTGTCCCGGTTAAACAATGTAA
AATAACGGCTCCCCTCATCTTAAACTACTGCGCCCTACCTTTCAGTTAGCCAAGGCGTACTTCGTTGGCATTACTTCATG
CTTATACCAGCCATCCATATATCTT---AGACAGATGATATGGTTGCATCGCATTTGCATATAGCACCCTGTGCTGATCA
TCAATGTTTTTTTTACCCCTTGCGGCGTTCATCGGAGCAGTATCTA-CTACTTATTACTG--------------------
----------------------------GTTTAGATGCTAGTTTTGCTTAGGACATAAGATATCTGCAATATTTGCCTCG
CCATCAACATTTCCACTGGTGATTTTGGCAACCTGAAGATGGTCGTGCAAAGTTTTTTTCTAAGCATTACATGTGAGAAC
GCGAGGTGCTGTGTGCAAAGTTTCAATAGGAGACAAGAGCCATGCTGTGAATGAGCGCCATGTCTAG----TGGTCTAGA
AGGATGCATGGTCCATTGTTTACAGAGCTCGGGTCTCACCAGACCGCCGAAGCTTTCTAAATCCCGGGCACTTACCGCGT
GAGAAGGAGCCGAAGGAACCGCTGCATGATCG
>chr5A_1
TTGACATTAAATGTCAAAATTTTGCAACCATTTGAAAAAAGCTATATTTATTTTCCTAAAGCCAATTT-AAGAACAACAC
ATAAAACATAGTGTGAACATGCGGAGTGCGGCCTTGGAAAACGATACCCACCTGACCTATCATGCAACAATATGTGAGTG
ATCACAACTCGAAGGCCGTGTCGCCTGTTGGATGCAAGATCCGTCATGCCGGATG----CCAACCCTAGAAACAAATTAA
GATATATATAATCTGAGCT-------------------------------------------------------------
-----------------------------CCTTGGCCATGGCAAGACGGATACTCTCTCCAATCCATATTAATTACCGCT
CACATGAGCGGAGCGGCAATTAATATGGAACGGAGGGAGTAGCTCTTTCTCTTGTTCATGCCATCGCAAGAAAACAGTAC
CATCGAGAAAGTTTCTTCAGACTTGGGAATTGTATTGTCACTGATGCGTGTGGGCGTGTTGTTACGATTTTTGTTCTTTC
-TTTTCTAAATTAATAACCTGGCAATCCTCTTTAAACAGATTGAGTCCATTAGACTCTGGTTTAAAGAAAGAAAAAAATC
TTTTTGAATA---------------------------------TTATTATTCGAAAATCTAATCTTA-------------
------------------------------------------------------------AGAAATTCTAATCTGTGGTA
GTC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TTTGCCATGAAACTGGGAAACCCGTACGATTTCCATGTGTGGGGTGGCCGTATCTTATACAGGT
GTGCTCCACAAAACCTCGTCGCGGGTCTGGATTCTGGACCACCCACCGAACCGCCCGCCGGCGATAGCAGCCGCCGCCAA
TGGCCGCCGTCTCGACGGCCCAAATCCCCCCATTCCTCACCACCCCCACTTTCCAGTCCTCGCTTCTCTTCCTGCCCACA
GCACGGCGGCCCCCAACCTCGCCGGCCTACGCCGACCGCCCTGCTCTTGCGGTCGCG---TGTCCTCGCCCCGGTGGAAC
CCACAGGACTCAGGCTGCCCAGCTCGTTCTCCCTGCCTGTGCTGCCGCTTCGTACTCCTCGGCGAGCGCGGCAGAAGGTA
CTGTACGTAATCAAATTGGGGCTGTGCTGTACTGTTGGCTTGAGCTCTTGAAGTAATTGTTACAGTTGTAAGTATGCTTT
TGAAGGGGATGAAGGCATGTCTGACCCGGAGCTGAGGCTGGTGCTGGAGCTTGCCACCGACGACGAGCTGCTGGAACTGG
AGGAGATCCTCTATGGTACCAGGTGTGGGGCTCGAGCTTACTGATTGTTCCAATGCTGTTTACTGTTTAGCACTGAGATA
ACTGATTGTTTGGTTTGGATCATAGTGATGGGTTTCACGAGACAGAGTTGAATTCGCTAGTTTGGAGTTTGGTTAATAGT
GTGCATATATAATCTGCTGCGATGTACTAGTTGTTTTGGAGTTTTTGGCTGCCTCTTTTGGTTCCTACCGTTGGTTATGA
CGGCAAGCATGCTTTGCTGCACAATTAGTCAAATATATCTAGTTGCTTG---------------ATTACAAAGTAGTAAC
GCTAACCGCATTCAAATTATGGACAAAGAGGATCAGATCTGTGAATTTACACAGAATAGTGTTACTTTTGTTTTAGAAAT
AATTTAATTAAACTCTTTGGCAAAAGAGTTAATTATGGCCAAAGAGGATCAGATCTGTGAATTTACTTTTGTAATGCTAA
CTAGATCATGTTTATTTGGAAATGATTAAAATGTCATCTCCTTTGTTTCTTTTTCCATCTACTGATTTTTGAAACCATCA
TGGTTTTTCTCTTGAGTTTTCTTTATTGTGCTGACTGATTCAGTTAGACCTGATCACTTTCCTGTGTTTGTATAATGGGA
CTGCTACAAAAAGCTGTTGTGCAATATCTACCTG---TCATATTCCAATGATTCACATTGTGAGCATAAGCTTTGGTTCT
GTGTCTCCTTATTCTTCAGCTATTTCAGCCCAGTGCTAAAATCAATTGGAAAAAGGCCGAATACCGTTTCTATTGTTGCT
TTGGACGATATCGAGGAGAGAGATCTTTTCATCTCAAAATTGGAGTCGAGGTTCTTGTATCTTGCTGCAGATGCACGCTC
AGTTCTAAGGTCAGTCAAGTAGGCTTTGATCCCTATATCATGCAAAAATGTATCCCTGATTATATTAATTACCCTGTAGA
AGTCGACCTGATATGGTTTGCTACCTTTTTGAATG-TTTGTACTTGTACAATCGTTCTTCATAGGGGCTGGAGGCCATCA
TACAGGAATGTCTTACTTCAAGTAAGAAGAGAACTTGGTGTTCAATGCTCCAGTAAATTATGTAGTGCAGACCTGGAGGC
CGAAATATTTCTACACCTCCTGGATGAATATTCAAGGTATGTACATCTTATTTTGGGGAAGTATAAGGATGCCCGAACAC
AAATTTCCCTGGGATATATGAAAATAGCTGTAAACTATGTAACCAGATACGCTGCAATCTG-TTTCCTTTTAAATGGATA
TATATAGTTATACACACTGCAATATATTAACTAGTAATCGGCGCTATTGCAGTTTCATATTCATTAATTTCTTTTGTGTT
TGAA-ACTTCTAAGACCTATACTCTCTCTTTGCCACTCTAGTGGTCTTGAATACTAAATTGTTTCTGCATTTAGCCGTCA
GAAAGGATCATTTTCATTTCCATGGGATAAACAGAAATCTCCAAAAGAAAACCCTAGCATTGAAGTAAACAACTGGAAGG
TGCTTCGTGACACTGCTTGGAGGATTGGAGCAAAGGGACTAGAAAGTACATTCTTGAAGGTTAGTTGTGGTTACTTCTTC
TCATTTCTTTGTGACCTTTCACTTCTTTGGCTAATTTCATTTGTTCTTTGATATGGAAGGGTGGCAGTGCATTGACTGTG
AAAACAATCTATGAATCGGTATGAAAT-A-AGTTTATTTGTTGGAAGATCAAATTCTGCTACTTCTAGTTCTCACAACAC
CGTTGTTTATTAATGTTACTTACCATTATGGTAGTTAGCCAAGAGACTATCTGGAAAACTGCTGATGGAGACAGCTAATT
ATGAGATTAAGAAAGAACTTGTTAAGCAGGTATACCTATTTTAATTGATTCTTTTGGTTTGTTGCTCCTGAATTTTTAAT
TATTTTGTGGTCATCGCTAGCGCAATAGATAGAACTTCATATCTGTGTTTGCCTAGTATAAGCTCTTGTTCTATTTCCCC
GTCTGGAAAATGCATTGGCAAAGCTTGATATTTAGACCAACCGTGTTTGCATGTTACAACTGATATTCACTACTATCTTA
ATATAATATCCTCCAGAAGTAATGCCTTTACCATTTCTAGGGTGGCCGATTAGCTGCTGTTAACCTTGAATCCAGAGCTG
GCTTGCTTGCAGCTAGGCAGGTAATACCATATTTTTATCTTCATTCTATTCCTCAGTGAGCTAGTATGCCCAAAGTGTGT
AGGAGGCAGCTGCTTTTGTACATCAATATTGGCATTGTACCCACG-TTTTTTGTCGAAGTTCGTACATACAGATGTCAAG
TTTTAACAATCCTCTTGAATGTATGCAGGGTTTGGCTCGTGCAGCATCTAGATATGTTGGCCTTAGGAGTTTCATGAGTT
TACTTGGACCAATGTATGTTTATTCTAATATTCTCTAGTATATTTTCATAAACCTTTCGTTGCTGTTACCGCC-TATTTT
TCTGGCTGTCAATATCTATCTTACACCATGATCTGATCAAATTAAATTCCCCTTTGCTTGCACATGGAGTATTTTGCCTG
TAAGTCGCCTGCTAACTGCTCTGTGCTTACACTTGACTGTCACACAGAATGTGGGGCACACTCTTGGCTGATATTGTGAT
CCAAATGCTCGGGACAGATTATGCTAGGATTGTGCAGGCAATCTACGCTTTTGCTCAGGTGAGGTTCACTTTATCATCCT
TCTCAGGTCTCAGTAGCTGCATTGATTCATATGTCGCCTTTGTTACAGATTCGGCTCACTCGGTCGTGTTACCTAGAATC
TCATGAAGACTGACAAGAGCACAATCATTACCGGACAAGCCTAACTGGGCACTCTGATCTTGTCCACCATTACAGCTCCA
TAGTGTACATTCTGATCGCGCAGATCATTTCTGGCCGCATTACTTCACG--AAGCTCTGCACCTCTGGGTAGTGCATAGA
TAACAGAGCAATTGGCAGATGGTAGGTAGCAAGGGCAGAGAAGAACAGCAACAGTTCAGCCCTTCAAA------------
----------TTCAGATGCGAGAATTTGATTGTAAAGCCTAGGAAAAACAGCATAGTGTCAGGATTGAAACTGTGTATTA
GTAGTACTAGTAGTACTTGACAAATAGCTCACGATAGACATTTGGGCCACCTACTCTCCGAAGGCGGTAGTTGCGGATGA
ATATACATCGACTTCACACTTCCACGGGGT-CCGAAGTTGTAGAACATGCATTCCATTCTGTCCCGGTTAAACAATGTAA
AATAACGGCTCCCCTCGTCTTAAACTACTGCGCCCTACCTTTCAGTTAGGCAAGGCGTACTTCGTTGGCATTACTTCATG
CTCATACCAGCCATCCATATATATCTTAAGACACATGATATGGTTGCATCGCATTTGCATATAGCACCCTGTGCCGATCA
CCGATG----TTTTCCCCCTCGCGACGTTCATCGGAGCAGTATCTATCCACTCCCTCTGTCCCAAAATTCTTGTCTTAGA
TTTGTCTATATACAGATGTATCTAACTAGTTTAGATGCTGGTTTTGCTTAGGACATAAGATATCTGTGATATGTGCCTCA
CCGTCAACAAGTGCACTGGTGATTTTGGCAACCTGAAGATGGTCGTGCAAAGTTTTTACTAAACT-TTACATGTGAGAAC
GCGAGGTGCTGTGTGCAAAGTTTCAATAGGAGAC--GAGCCATGCTGTGAATGAGCGCCATGTCTAGCTAGTGGTCTAGA
AGGATGCATGGTCCATTGTTTATAGAGCTCGGCTCTCACCAGACCGCCGAAGCTTTCTAAATCCCGGGCATTTACCGCGT
GAGAAGGAGCCGAAGGAACCGCTGCATGATCG
>chr5D_1
TTGTCATTAAATGTCAAATTTTTGCAACAATTCTAAAAAAGCTATATTTATTTTCCTAAAGCCAATTTCAAGAACAACAC
ATAAAACATAGTGTGAACATGCGGAGCGTGGCCTTAGGAAACGATATACACATAACCTATCATGTAGCAATATGCCAGTG
ATCACAACTCGAAGGCTGTGTTGCCTGTTGGGTGTAAGATCGGTCATGCCGGATGGATGCCAACCCTAGGAACAAACTAA
AACATACTCCCTCTGTTTCACAATGTAATGTGCCGCGCTATCCGAGATCTAAGTTTGACCATAAATTTAGTCAACAAGAC
CGACTGTATAGAGAGTATATATCATGAGCCCATGGCCGTGCCAAAATAGATACTCCCTCCGATCCAAATTAATTGTCGCT
CGTGCTAAGTAAGCAATATTTAATATGGATCAAACAGAGTTGCTCTTTCTCCTGTTCATGCCATCGCAAAGAAACAAT--
--------AAGTTTATTCAGACTTGGAGTTGTCTTTGCCA-----GCGTGTGGGCATGTTGTTACAATTTTCGTCCTTTT
-TTTCTAAAATTAATAACCTGGCAGTCCTCTTCAAATAGA----ACCCATTAGACTCTGGTTTAAAAAAC--ATTT--TT
TTGTTAAATT---------------------------------TATTTATTTTATATTTTAAAACTAATCTGGAATCAAC
TTGTAGTTGGGATGGTTAGGTGGACAGTGATATTCGGGTCCATTAGGGTTCAAAAATTCTAGAAATTCTAATCTGTGATA
GTC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TTTGCCATGAAACTGGGAAAACCATACGATTTCCATGTGTGGCGTGGCCGTATCTTATACAGGT
GTGCTCCACAAAACCTCGTCGCGGGTCTGGATTCTGGACCACCCACCGAACCGCCCGCCGGCGATAGCAGCCGCCGTCAA
TGGCCGCCGTCTCGACGGCCCAAACCCTCCCATTCCTCACCGCCTCCACTTTCCAGTCCTCGCTTATCTTCCTGCCCACA
GCACGGCGGGCCCCAACCTCGCTGACCTACGCCGGCCGCCCTGCTCCCGCCGTCGCGTCCTGTCCTCGCCCCGGTGGAAC
CCACAGGACTCAGGCTGCCCGGTCCGTTCTCCCTGCCCGTGCTGCCGCTTCGTACTCCTCGGCGAGCGCGGCAGAAGGTA
CTGTCCGTAATTAAATTGGGGCTGTG-----CTATTGGCTTGAGCTCTTG---TAACTGTTACAGTT----GTATGCTTT
TGAAGGGGATGAAGGCATGTCTGACCCGGAGCTGAGGCTGGTGCTGGAGCTTGCCACCGATGAGGAGCTGCTGGAACTGG
AGGAGATCCTCTATGGTACCAGGTCTGGGGCTCGAGCTTGCTGATTGTTCCAATG-------CTGTTTAGCACTGAGATA
ACTGATTGTTTGGTTTAGATCATAGTGATGGGTATCACGAGACAGAGTTGGATTCGTTTGTTTCGAGTTTGGTTAATAGT
GTGCATATATAATCTGCTGCGATGTACTAGTTGTTTTGGAGTTTTTGGCTGCCTCTTTCGGTTCCTACCGTTGGTTATGA
CGGTAAGCATGCTTTGCTGC-----------------------------------------------ACAAAGTAGTAAC
GCTAACCGCATTCAAATTATGGACAAAGAGGATCAGATCTATGAATTTACACAGAATAGTGTTACTTTTGTTTTAGAAAT
AATTTAATCAAACTCTTTGGCAAAAGAGTTAATTATGGCCAAAGAGGATCAGATCTGTGAATTTACTTTTGTAACGCTAA
CTAGATCATATTTATTTGTAAATGGTTAAAATTTCATCTCCTTTGTTTCTTTTTCCATCTACTGATTTTTGAAACCATCA
TGGTTTTTCTCTTGAGTTTTCTTTATTGTGCTGACTGATTCAGTTAGACCTGATCACTTTCCTGTGTTCGCATAATGGGA
CTGCCACAAAAAGCTGTGGCGCAATATCTAACTGTCATCATATTCCAATGTTTCAAATTGTGAGCATAAGCTTTGGTTCT
GTGTCTCCTTATTCTGCAGCTATTTCAGCCCAGTGCTAAAATCAATTGCAAAAAGGCCGAACACCGTTTCTGTTGTTGTT
TTGGATGATATCGAGGAGAGAGATCTTTTCATCTCAAAACTGGAGTCGAGGTTCTTGTATCTTGCTGCAGATGCACGCTC
AGTTCTAAGGTCAGTCAAGTAGGCTTTTATCCCTGTATCATACAAAAATGTATCCCTGATTAGATTAGTTACCCTGTAGA
AGTCGACCTGATATGGTTTGCCACCTTTTTGAACGTTTTGTACTTGTACAATCTTTCTTCATAGGGGCTGGAGGCCATCA
TACAGGAATGTCTTACTTCAAGTAAGAAGAGAACTTGGTGTTCAATGCTCCAGTAAATTATGTAGTGCAGACCTGGAGGC
AGAAATATTTCTACACCTCCTGGATGAATATTCGAGGTATATAAATTTTATTTT-GGGAAGTATAAGGATGCCCGAACAC
AAATTTCCCTGGGATATATGAAAATAGTTGTAAACTATGTAACCAGATACGCTGCAATCTATTTTCCTTTTAAACGG--A
TATATA--------CATTGCAATCTATTAACTAGTAATTGGCGCTATTGCAGTTTCATATTCATTAATTTCTTTTGTGTT
TGAAAACTTCTAAGACCTATACTCTCTCTTTGCCACACTAGTGGTCTTGAATACTAAATTGTTTCTGCATTTAGCCGTCA
GAAAGGATCATTTTCATTTCCATGGGATAAACAGAAATCTCCAAAAGAAAACCCTAGCATTGAAGTAAACAACTGGAAGG
TGCTTACTGACGCTGCTTGGAGGATTGGATCAAAGGGTCTGGAAAGTACATTCTTGAAGGTTATTTGTGGTTATTTCTTT
TCTTTTCTTTGTGACATTTCACTTCTTTGGCTAATTTCATTTTTTCTTTGATATGGAAGGGTGGCAGTGCATTGACTGTG
AAAACAATCTATGAATCGGTATGAAATAA-AGTTTATTTGTTGGAAGATCAAATTCTGCTACTTCTAGA---CACAACAC
CGTTGTTAATTAATGTTACTTACCATTATGGTAGTTAGCCAAGAGACTATCTGGAAAGCTGCTGATGGAGACAGCTAATT
ATGAGATTAAGAAAGAACTTGTTAAGCAGGTATACCCATTTTAATTGATTCTTTTGGTTTGCTACTCCTGAATTTTTAGT
TATTGTGTGGTCATCGCTAGCGCAATAGATAGAACTTCATATCTGCGTTTGCCTAGTATAAGCTCTTGTTCTTTTTCCCC
ATCTGGAAAATGCATTGGCAAAGCTTGATATTTAGACCAACCATGTTTGCATGTTGCAACTGATATTCACTACTATCTTA
ATATAATAACCTCCAGAAGTAATGTCTTTACCATTTCCAGGGTGGCCGATTAGCTGCTGTTAACCTTGAATCCAGAGCTG
GCTTGCTTGCAGCTAGGCAGGTAATACCATCTTTTTATCTTCATTCTATTCCTCAGTGAGCTAGTATGCCCAAAGTGTGT
AGGAGGCAGCTGCTTTTGTACATCAATATTGGCATTGTACCCACG-TTTTTTGTCGAAGATCGTACATACAGATGTCAAG
TTTTAACAATAATCTTGAATGTATGCAGGGTTTGGCTCGTGCAGCATCTAGATATGTTGGCCTTAGGAGTTTCATGAGTT
TACTTGGACCAATGTATGTTTATTCAAATATTCTCTAGTATATTTTCATAAACCTTTCCTTGCTGTTACCGCCTTATTTT
TCTGGCTGTCAATATCTATCTTACACCATGATCTGATCAAATTAAATTTCCCT----TTGCACATGGAGTATTTTGCCTG
TAAGTCGCCTACTAACTGTTCTGTGCTTACACTTGACTGTCACACAGAATGTGGGGCACACTCTTGGCTGATATTGTGAT
CCAAATGCTCGGGACAGATTATGCTAGGATCGTGCAGGCAATCTACGCTTTTGCTCAGGTGAGGTTCACTCTATCTCCTT
GTTTA-GTCTCAGCAGCTGCATTGATGCATACGTCGCCTTTCTTACAGATTCGGCTTACTCGGTCGTGTTACCTAGAATC
TCATGAAGAATGACCAGAGCAGAATCATCACCGGACAAGCCTAACTGGGCACTCTGATCTTGTCTACCATTACAGCTCCA
TAGTGTACATTCTGATCGCGCAGATCATTCCCGGTCGCAGTACTCCACGGTAAACTCTGCAGCTTTTTGCAGAGCATAGA
TAACAGAGCAATTGGCTGATGGTAGGTAGCAAGGACAGATAAGAAGAGCAGCATTTTCACCGCTTTGAATTTCAGAAGGC
CCATAGCTGCTTCATATGTGGGAATTTGATTGTGAAGCTTAGGAAAAACAGCATAGTGTCAGGATTGAAACTGTGTATTA
GTAGTA---------CTTGACAAATAGCTCACGATAGACATTTGGGCCACCTACTCTCCGAAGGCGGTAGTTGCGGATGA
ATATACATCGACTTCACACTTCCACGGGGT-CCGAAGTTGTAGAACATGCATTCCATTCTGTCCCGGTTAAACAATGTAA
AATAACGGCTCCCCTCATCTTAAACTACTGCGCCCTACCTTTCAGTTAGCCAAGGCGTACTTCGTTGGCATTACTTCATG
CTTATACCAGCCATCCATATATCTT---AGACACATGATATGGTTGCATCGCATTTGCATATAGCACCCTGCGCTGATCA
TCGATGTTTTTTT---CCCTCGCGACGTTCATTGGAGCAGTATCTATCTACTTATTACTG--------------------
----------------------------GTTTGGATGCTGGTTTTGCTTAGGACATAAGATATCTGTGATATTTGCCTCA
CCATCAACAAGTGCACTGGTGATTTTGGCAACCTGAAGATGGTCGTGCAAAGTTTTTCCTAAACT-TTACATGTGAGAAC
GCGAGGTGCTGTGTGCAAAGTTTCAATAGGAGACGAGAGCCATGATGTGAATGAGCGCCATGTCTA----GTGGTCTAGA
AGGATGCATGGTCCATTGTTTATAGAGCTCGGCTCTCACCAGACCGCCGAAGCTTTCTAAATCCCGGGCACTTACCGCGT
GAGAAGGAGCCGAAGGAACCGCTGCATGATCG
>SNPs
---S------------------S---------------------S--------S-------------S------------
----------------------S----------------------------S--S-------------------------
---------SS--------------S-S----------S--------SSSSS----------------------------
----------S-S-------------------------------------------------------------------
--------------------------------------------------------S--S--------------------
--------------------------SS------------------------------------S---------------
------------------S-------------S-------SS--SS---S--------------S--S-S--S--S---S
S------------------------------------------------------------S------S-S---------
----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-----------S-S---------SSSSSSS--SS
SSSSSSSSSSSS-SS---SS-SSSSSSSS-SS--SSSS-SSS---SSS--SSSSS-SSS-SSSS-SSSSS-SSSSS-S-S
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS-----------------------------------------S----------------------
---------------------------------S----------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
----------------SS-----------------------------S---S---------S------------------
----S-----------S-------------------------------------------S-------------------
------------------------------------------------------S-------------------------
----------------------------S------------------------------------S--------------
----------------------------------------------------------------------S---------
----------------------------------------S---------------------------------------
---------------------S---------------------------SSSSSSSSSSSSSSS----------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------S-----------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
S----------------------------------------------------S--------------------------
------------------------S---------------------------S-------S-------------------
--------------------------------------------S-----------------------------------
------------------------------------------------S-------------------------------
-------------------------------------------S------------------------------------
------------S---------------------------S-S-------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S-S----
---S------S---------------------------------------------------------------------
-----------------------------------------------------S--------------------------
--------------------------------S-----------------------------------------------
----S-------------------------------------------------S----------------S--------
---------------------------------------------S----------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
---SS---------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S--------------------------S-------------------------------------------
----------------------------------------S---------------------------------------
-SS----------------------------S-----------------SS---S-------------------------
-----------------S--------------------S--------S------------S-------------------
--------------------------------------------------------------------------------
---------------S--------------------------------------S-------------------------
-------------------------------------S------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
--S-----------S-----S---S-------------------------------------------------------
---------------------------------------S--------------------------SS-----------S
---------SS-S--------------------------------------------SSSS--SSS--------------
----------------------------------S---------------------------------------------
----------------------S---------S-----------------------------------------------
--------------------------------
>forward_826
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------ACGCGCATACATTCATCCCT------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2533
--------------------------------------------------------------------------------
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----------------------------------------------------TGTTCTTCGTAGGGGCTGGA--------
--------------------------------------------------------------------------------
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--------------------------------
>forward_1193
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CAGTCCTCGCTTCTCTTCCC-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2764
--------------------------------------------------------------------------------
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-------------------------------------------TAGATACGCTGCAATCTGTTTCC--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------
>forward_1342
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TGCCGTTTCATACTCCTCGT------------------
--------------------------------------------------------------------------------
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--------------------------------
>reverse_2991
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--------------------------------------------------------------------------------
------------------------------GCAGAAATCTCCAAAAGAAAACCC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------
>forward_2306
--------------------------------------------------------------------------------
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----------------------------------------------TGCAAAAAGGCCGAACACCA--------------
--------------------------------------------------------------------------------
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>reverse_3752
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-----------------------------------------------------------------------GAAGTGTGT
AGGAGGCAGCT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------
>forward_3574
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----------------------------------AGACCAACGTGTTTGCATGC--------------------------
--------------------------------------------------------------------------------
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--------------------------------
>reverse_4678
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-------------------------------------CCATTTGGGCCACCTACTCT-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
