>input_sequence_23240
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---------------------------------------------------------------------------ATATA
AATAGACCGTAAGGTTGTCATCTCTCGAGGCTTTGGTGGAAAGAGGGTGTGGAAATAAGAGAATGCTTGCTTGTGCCCAT
CTGAAAGCTGCCGTCCGTGGTCACTCTCTGGTCAAGTGGTCTTTCGA--------------ATCGATTTCCTAACCTCGT
ACTCTCTCCCTTCGAAAATACTTATCATCAAAATAAATAAATAAAATGTATTTAGATGTATTTTAATTTTAAATACATCT
TTTTTGTCCATTTTAATGATAAGTATTTTCGGGCGGAGGGAGGGAGTACGAAATTTGCTTCTGCTCCAGCAGCGAGGTGT
GGACTTGACGACTTCTCCACCCTGCTCGGCTCTGAGAAGACTGGGGTCGTCGCGTCCGGTCTTCTTGAAGCCCCAAAGTC
CAGGTCCCGTCCTGATTACCTATCTCGTATACTAGTACGGGACTGCCACATGCA-TGCCAATCTGGTACGTAACTTCCAA
GCTTTTTTGTACAAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAATGAAATGAGGCCGATGAAAATGAGGAACGGTG
ACAAAGTTGGCAGCCATGATCCACAAAGGTAAGCAAGACGCAAAAGATACTAGTAGCAATTAATCTTAATCGCTTTGGTT
AATCTAGCGGCATTGACTAACCATATCTTGCATGCGTGTAGCTTGGCGGACGTCCAAAACCTGTGGAACCAATGGGAGAT
CCACTGCCTGATAGTGGCAAGCTTCGCCTTGCAAGTGTTCCTCTTCTCCACCGCGGGCCTCCGGCTGCGCAGCTCCTCCC
GTGTCGTGGGGGTGCTGCTGTGGCTGGGCTACATGTCGGCCGACTCCGTCGCCGTGTTCGTCCTGGGCCATCTCTCCGTC
CACACCGCCGGCGGCGGCCACCAGCTGCTTCTCTTCTGGGCGCCCTTCGTGCTCCTCCATCTGGGCGGCCAGGACACTAT
CACGGCTTTCTCCATGCAGGACAACGCTCTGTGGATGCGCCACCTGCTGGGCTTCGCCTCGCAGCTGGCGGTGGCCGTCT
TCGTCGTCTCCAAGTCGCCCTGGCCAGACCGCCGGCTCCTCGCCGCCATGCTGCTCATGTTCCTGTCGGCGAGCATCAAG
TACGGCGAGCGCATCTACTGCCTCGCCACGGCCAACCCAGGGCGGCTCATGAAGGAGTTCCTGCGTGGCTTTGAAGACCG
AATACGCTCCATCAAGGAGATGCAAGCCATCGCCAGAGAAGGCCTGGGGTCCTATCTCAGCAGCCGCACGTTCACCGAGG
TGTCCCTGAATCCTGCCATGGACATCATGTCCACGGACATCCTGCCCGACTACGACTGGTCCGTCTCCCGCGACGTCTTC
TTGGACCTCTACTCCAAGCAGATCGATCCTTCCACGCCACATTACCGTCGCAACGCCTACTTCTTCGCCGAGGACAGGCT
CTGGGTCTGCTACCAACGTCTCTACACCAAGGCCGTGTTCCGTCTCTCCCCTGCTGGCGCCTTGCTCCATCTCCTCGGGT
TTCTCTCCACCTCGGCGGCCATGGCGCTCTTCTTCATGGCAGGTAAAAGCGGCTACGGCGGAGCTGACGTCGCCGTGTCC
ACCCTGTTGCTCGTAGGCGCCGTCACTCTGGAGGCAGCCTCCTTCTTCATGTCCATGTTCTCCCGCGAAGACCTCTGGAG
GCACCCGCTCTGCTGCTCCGGCAAGCTCCCTGTGATCCACTGCGTCTTCTTCATCACCTGCGGGACTTGCGCCGATTCGC
TAAGGAGGAGGTGGCGGAGACCGCAGTGGTCCAAAACACTAACGCAGTACAGCATCATCCAGAGATCCGTCAAGAGAGCT
TCCGGCAGCTCAATGGTGCCGCGGTGGGTCGTCGAGCGCCTGAGCTCGAGCGCGTCTGGCGTCGAGCGCATTCCCGTCGC
CGACGACCTCAAGCACCTGGTCGTCAAGAAACTGCTAGACGATAAGATGATGGCGACGGACTTCACCAGCTCGCGGGGCG
AGGTGGCGCTGGGGAGGCGGTGGGCTGATCAGCAGCCGCCACAGAGCCTCAGCCTGTCAGAGAAGGTCCTAAGCGAGAGT
GTGAAGGAAGTGGATTTCCCAACCAGCGTGCTCATCTGGCACATTGCCACGGACATACGCTTCTTCACCGACGCTGCCGG
CGAGGCCTCCGACGACAAAACCATTATTAGCAGGCAGCTCTCAGGTTACATCATGTACCTCATCTTCAAGTGCGGCGTCA
TGCTCAGCAGCAACTCCAAGTTCCTGCTCCGCAAAGCCGGTGATGAGATCACCGCTCTTGTCAAGGCCGGGCGGCGA---
------GATGAACAACATGATGGATCATCATCCCGGGGTAAGAAAG------GCATAGCCATGGCTGTGCAGCATTTGGT
GGGATCGCCGCTGTTCGCGCAGGCACGCTCTAGTTCAGACACAGTGCCGGCCAACCCCAGCACCGCTGATATCCTCGGTG
ACCCGGTGCTGCCTCGCGCGTTCAGGGTGGCCGAGTCGCTGGCCGGCGTCCCGGAAGCCGATCGCTGGGGGCTCATCGTC
GATGTCTGGCTGGAGATGCTCTACTACATTGCGCCTCGCTGCGGGGCCGCGTTCCATCGCGAGCATCTCAGCACCGGTGG
GGAGTTCATCACGCATGTCCTCGTCGTAATGTATACCATAGGCCCCCTCGGCTATCACCCAAGTCTGCTTAAGTTTGGAC
CTCACTAGTACTGCAGGTTGCACGCGTATCCTGAAAGTTTTAGAGCATACAAGTCGTGCGGGTGCGGCACCGGCGGTGCT
CCAGCCGGCGGCCGACCCCGAGCGACCACCGGCCGCTACTGCTGCGGGCGGGAGCCCGCACCGAGCGCCGCCGCGACTCA
TGGATTTGGTGGCACCACCGGCGGCACAGCTGCTTCAGATTCGTCACTTTCAGTTTGACAGTGTGATATTTGATAAATTC
AGTTTCGTCGGAGAACAAATGTTTGACAGTGTGATGTTTGATAATGATTGCAATTTCAGATTCTTCAAAGAACAACCACT
ATCTAACTTCAGTTTCGTCAGAGAACAATCACTGTTGAACTTGATTGATATACTAGCATGTTGTTGTCATATTCAGATGT
TTTTATAGAGCAAGTAGTTTGCATGTTTAAACTTCGGTGGAACTATGAAATATAGTCGTAGAATTCGAATGTTCGTTCA-
--------------------------------------------------------------------------------
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----------------------------------------
>chr5A_1_TraesCS5A01G241600
TCACCCAAATGTTTCGTGGCATTTGTACTCTGTTTGATAAGGATTTTCTACGAAAGGAAAACAAGTAAAAACAGCAACTG
GCACTTGTCACTATGGCAATAGTTTAGTCCCAAA--AAATAATATAAAGTTGCTATAAAATGATTGTAAAACATCCAAGA
TTGATCATATAACCGGGTATGGCTACTAGGCAGACGGGTGGGGTGGAAAGTGACGGCGGCGACGGGCGGGAGGAGGAAAA
TGTGGATCGATGGTAAGGTTTCGGTGCCGCCGGTCGACTTAAATAGGCGGGCAATGCAATACGCGGCTCGCCGGAGCTGC
ACCACGCGGCGTCATCGGTCCGACGGATGAGACGAGCTTCGGACCACCGGGTTTGATGGCGTTTCCGTCTAGGACCCCTT
CGTCTGTCCGACGAGGCAGGCGTCCCAGGCGCCCCCATATCCATCCCATATTTAAGCTGGATATGGGGGGTGCCGGTCAG
TCA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GGGCGTTTGAGGGCCGCTTGAGA-GGTCCTTCTGGGTCAAAAAATCATGACCGGGC------
-----GGCCCGTCCGGACATATGAGACGGGTTTGACAGGTCCGG-TTGTAAATACTCTAATTATTTGCTCAACAGGCATT
TATTTTTAATCTCCATGTGCATGTACTACTAGCACCAAAGAAAACTTTGAGCTCTTATTCGATCTCACGAAAAGTAGCAG
ACCCAGTCCAAGACAACTACTGACACGCTCTCTAACTTGCTTCACACAACTAGCGTCAGGAAAGTAAGAGAATCATCCTA
ATAATGCAGGAGCCGAAATAGGTGTGTAACCAATTCTTCTGAGAACTAACGAACAGAATCAGCTGCGGGCCCGAAATAAA
GGAAGTCTGATCAGACGAACTGAACAAGGTTCTCCAAGTAACAAAGCAAGAAACCGAACAAGGTTCTCCGACAAAGCAGC
CGTCCGAAAGAGAAACCTGAGGTATAG-----GTGTGATTTACACACTGATGACTGATGAGTGATGAGATACTATATATA
AATAGACCGTAAGGTTGTCATCTCTCGAGGCTTTGGTGGAAAGAGGGTGTGGAAATAAGAGAATGCTTGCTTGTGCCCAT
CTGAAAGCTGCCGTCCGTGGTCACTCTCTGGTCAAGTGGTCTTTCGA--------------ATCGATTTCCTAACCTCGT
ACTCTCTCCCTTCGAAAATACTTATCATCAAAATAAATAAATAAAATGTATTTAGATGTATTTTAATTTTAAATACATCT
TTTTTGTCCATTTTAATGATAAGTATTTTCGGGCGGAGGGAGGGAGTACGAAATTTGCTTCTGCTCCAGCAGCGAGGTGT
GGACTTGACGACTTCTCCACCCTGCTCGGCTCTGAGAAGACTGGGGTCGTCGCGTCCGGTCTTCTTGAAGCCCCAAAGTC
CAGGTCCCGTCCTGATTACCTATCTCGTATACTAGTACGGGACTGCCACATGCA-TGCCAATCTGGTACGTAACTTCCAA
GCTTTTTTGTACAAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAATGAAATGAGGCCGATGAAAATGAGGAACGGTG
ACAAAGTTGGCAGCCATGATCCACAAAGGTAAGCAAGACGCAAAAGATACTAGTAGCAATTAATCTTAATCGCTTTGGTT
AATCTAGCGGCATTGACTAACCATATCTTGCATGCGTGTAGCTTGGCGGACGTCCAAAACCTGTGGAACCAATGGGAGAT
CCACTGCCTGATAGTGGCAAGCTTCGCCTTGCAAGTGTTCCTCTTCTCCACCGCGGGCCTCCGGCTGCGCAGCTCCTCCC
GTGTCGTGGGGGTGCTGCTGTGGCTGGGCTACATGTCGGCCGACTCCGTCGCCGTGTTCGTCCTGGGCCATCTCTCCGTC
CACACCGCCGGCGGCGGCCACCAGCTGCTTCTCTTCTGGGCGCCCTTCGTGCTCCTCCATCTGGGCGGCCAGGACACTAT
CACGGCTTTCTCCATGCAGGACAACGCTCTGTGGATGCGCCACCTGCTGGGCTTCGCCTCGCAGCTGGCGGTGGCCGTCT
TCGTCGTCTCCAAGTCGCCCTGGCCAGACCGCCGGCTCCTCGCCGCCATGCTGCTCATGTTCCTGTCGGCGAGCATCAAG
TACGGCGAGCGCATCTACTGCCTCGCCACGGCCAACCCAGGGCGGCTCATGAAGGAGTTCCTGCGTGGCTTTGAAGACCG
AATACGCTCCATCAAGGAGATGCAAGCCATCGCCAGAGAAGGCCTGGGGTCCTATCTCAGCAGCCGCACGTTCACCGAGG
TGTCCCTGAATCCTGCCATGGACATCATGTCCACGGACATCCTGCCCGACTACGACTGGTCCGTCTCCCGCGACGTCTTC
TTGGACCTCTACTCCAAGCAGATCGATCCTTCCACGCCACATTACCGTCGCAACGCCTACTTCTTCGCCGAGGACAGGCT
CTGGGTCTGCTACCAACGTCTCTACACCAAGGCCGTGTTCCGTCTCTCCCCTGCTGGCGCCTTGCTCCATCTCCTCGGGT
TTCTCTCCACCTCGGCGGCCATGGCGCTCTTCTTCATGGCAGGTAAAAGCGGCTACGGCGGAGCTGACGTCGCCGTGTCC
ACCCTGTTGCTCGTAGGCGCCGTCACTCTGGAGGCAGCCTCCTTCTTCATGTCCATGTTCTCCCGCGAAGACCTCTGGAG
GCACCCGCTCTGCTGCTCCGGCAAGCTCCCTGTGATCCACTGCGTCTTCTTCATCACCTGCGGGACTTGCGCCGATTCGC
TAAGGAGGAGGTGGCGGAGACCGCAGTGGTCCAAAACACTAACGCAGTACAGCATCATCCAGAGATCCGTCAAGAGAGCT
TCCGGCAGCTCAATGGTGCCGCGGTGGGTCGTCGAGCGCCTGAGCTCGAGCGCGTCTGGCGTCGAGCGCATTCCCGTCGC
CGACGACCTCAAGCACCTGGTCGTCAAGAAACTGCTAGACGATAAGATGATGGCGACGGACTTCACCAGCTCGCGGGGCG
AGGTGGCGCTGGGGAGGCGGTGGGCTGATCAGCAGCCGCCACAGAGCCTCAGCCTGTCAGAGAAGGTCCTAAGCGAGAGT
GTGAAGGAAGTGGATTTCCCAACCAGCGTGCTCATCTGGCACATTGCCACGGACATACGCTTCTTCACCGACGCTGCCGG
CGAGGCCTCCGACGACAAAACCATTATTAGCAGGCAGCTCTCAGGTTACATCATGTACCTCATCTTCAAGTGCGGCGTCA
TGCTCAGCAGCAACTCCAAGTTCCTGCTCCGCAAAGCCGGTGATGAGATCACCGCTCTTGTCAAGGCCGGGCGGCGA---
------GATGAACAACATGATGGATCATCATCCCGGGGTAAGAAAG------GCATAGCCATGGCTGTGCAGCATTTGGT
GGGATCGCCGCTGTTCGCGCAGGCACGCTCTAGTTCAGACACAGTGCCGGCCAACCCCAGCACCGCTGATATCCTCGGTG
ACCCGGTGCTGCCTCGCGCGTTCAGGGTGGCCGAGTCGCTGGCCGGCGTCCCGGAAGCCGATCGCTGGGGGCTCATCGTC
GATGTCTGGCTGGAGATGCTCTACTACATTGCGCCTCGCTGCGGGGCCGCGTTCCATCGCGAGCATCTCAGCACCGGTGG
GGAGTTCATCACGCATGTCCTCGTCGTAATGTATACCATAGGCCCCCTCGGCTATCACCCAAGTCTGCTTAAGTTTGGAC
CTCACTAGTACTGCAGGTTGCACGCGTATCCTGAAAGTTTTAGAGCATACAAGTCGTGCGGGTGCGGCACCGGCGGTGCT
CCAGCCGGCGGCCGACCCCGAGCGACCACCGGCCGCTACTGCTGCGGGCGGGAGCCCGCACCGAGCGCCGCCGCGACTCA
TGGATTTGGTGGCACCACCGGCGGCACAGCTGCTTCAGATTCGTCACTTTCAGTTTGACAGTGTGATATTTGATAAATTC
AGTTTCGTCGGAGAACAAATGTTTGACAGTGTGATGTTTGATAATGATTGCAATTTCAGATTCTTCAAAGAACAACCACT
ATCTAACTTCAGTTTCGTCAGAGAACAATCACTGTTGAACTTGATTGATATACTAGCATGTTGTTGTCATATTCAGATGT
TTTTATAGAGCAAGTAGTTTGCATGTTTAAACTTCGGTGGAACTATGAAATATAGTCGTAGAATTCGAATGTTCGTTCAA
AAAAAATGGTTTTATTGATCTGGGTGCCCTATTTTACTATTTTAGGGATGTTGTTGGAGATGGCGCTACCTCATGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCTCCCCCCAATTTTTTTTCATGGTCAATTCTTTTTACTCCACCCACTTTT
CATGCCTTATTATAGGGCTGTTGTTGGAAACGCCCTCAATGTGATATGTTGTATTGGATTCTACTGTCTACTACATACAA
TCCGAATTTTAAGAAGACTAATCATTTCACTGGTTAATTTATAAAACTCGAGAGAAAAAAATCTATCGCCGCCAATTTGT
ACTAGAGTTTTCTATTTAGTGTCATATTAAAAAGGATATAAATTATCTCTATCTTTCACACGAAACATGTTTTCGCCCAC
CTTTATATGTAAAGCAACAATTGAACTGAGTACAAGGCCAAATGATACAAGATGACGAGCAGCCCTAAAACAATGCCGAT
CCCATGATAACCGGATCACGCAGGACTCACGAAAATACAATATCGAAAGAGAGCCTAGGAAAAACTGAGTACAACGTCAC
GCTAACCCCCTATAATACCTAAGTTCCACAACATTGCCT-CGAGGGGGAGAACAGCGCTAAGAGTCACCGCAGCCGAGTC
TCAATGGACAAAGGTTTTCACCCTGAACCCCAACACGAGG
>chr5D_12
-----------TTTCGTGGCATTTGGACTCTGTTTGATAAGGACTTTCTGCGAAGGAAAAAAAAGTAAAAACATCAACTG
GCACTTGTCACTATGGCAATAGGTTAGTCCCAAAAAAAATGATATAAAATTGCTATAAAATTAGTGTAGAACATCCAAGA
TTGATCATATAACCGGGCATGGCTACTAGGAGGACGAGTGGAGTGGAAAGTGGCGGCGGCGACGGACAAGAGGAGGAAAA
TGTGGATCGATGATAGGGTTTCGATGCCACCGGTCGACTTAAATAGCCGGGCAATGCAATACGCGGCCCGCCGGAGTTGC
GCCACGCGGCGTCACCGGTCCGACGGAGGAGACGAGCTTCGGACCGCCGGGTTTGAGGGCGTTTCCGTCTGGGACCCCTT
CGTCTGGCCGACGTGGCGGGCGTGCCCGGGCGCCCCATATCCGCCCCATATTTGGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAGCCCGGGCGTTTGAGGGCCGTTTGAGGGGGTCTGTCTGGGTCAAAAACTCGTGATCGGGCAGTGAC
CGTGCGGCATGCCCGGACGTATGAGGCGGGTTTAAAAGGTCCGATTTGTAGATGCTCTAACTATTTGCTCAACAGGCATT
TGTTTTTAACCTCCATGCGCATGTACTACTAGCACCAAAGAAAACATTGAGCTCTTGTTCGATCTCGTGAAAAGTAGCAG
ACCCAGCCCAAGACAACTACTGACACGCTCTCTAACTTGCTTCACACAACTAGCATCAGGAAAGTAAGAGA---ATCCTA
ATAATGCAGGAGCCGAAATAGGTGTGTAACCAATTCTTCTGAGAACTAACGAACAGAATCAGCTGCGGGCCCGAAATAAA
GGAAGTCTGATCAGACGAACTGAACAAGGTTCTCCAAGTAACAAAGCAAGAAACCGAACAAGGTTCTCCGACAAAGCAGC
CGTCCGAAAGAGAAACCTGAGGTATAGTATAGGTATGATTTACACACTGATGAGTGATGAGATAC---------TATATA
AATAGACCGTAAGGTTGTCATCTCTTGAGGCTTTGGTGGAAAGAGGGTGTGGAAATAAGAGAATGCTTGGTTGTGCCCAT
CTGAAAGCTGCCGTCCG-GGCCACTCTCTGGCCAAGTGGTCTTCCGTGGAGACCCCGGCCGATCGATTCCCTAACCTCGT
--------------------------------------------------------------------------------
-----------------------------------------------ACGAAATTTGCTTCTGCTCCAGCAGCAAGGTGT
GGACTTGACGACTTCTCCACCCTGCTCGGCTCTGAGAAGACTGGGGTCGTCGCGTCCGGTCTTGTTGAAGCCCCAAAGTC
CAGGTCCGTCCA-GATTACCTATCTCGTATACTAGTACGGGAATGCCACATGCATTGCCAATCTGGTACGTAACTTCCAA
GCTTTTTTCTACAAA---GAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTGAAATGAGGCCGATGAAAATGAGGAACGGTG
ACAAAGTTGGCAGCCATGATCCACAAAGGTAAGCAAGACGCAAAAGATACTAGTAGCAA------TTAATCGCTCTGGTT
AATCTGGCGGCATTGACCAACCATATATTGCATGCGTGTAGCTTGGCGGACGTCCAAAACCTGTGGAACCAATGGGAGAT
CCACTGCTTGATAGTGGCAAGCTTCGCCTTGCAAGTGTTCCTCTTCTCCACCGCGGGCCTCCGGCTGCGCAGCTCCTCCC
GTGTCGTGGGCGTGCTGCTGTGGCTGGGCTACATGTCGGCCGACTCCGTCGCCGTGTTCGTCCTGGGCCATCTCTCCGTC
CACACCGCCGG---CGGCCACCAGCTGCTTCTCTTCTGGGCGCCCTTCGTGCTCCTCCATCTGGGCGGCCAGGACACCAT
CACGGCTTTCTCCATGCAGGACAACGCTCTGTGGATGCGCCACCTGCTGGGCTTCGCCTCGCAGCTGGCGGTGGCCGTCT
TCGTCGTCTCCAAGTCGCCCTGGCCAGACCGTCGGCTCCTCGCCGCCATGCTGCTCATGTTCCTGTCGGCGTGCATCAAG
TACGGCGAGCGCATCTACTGCCTCGCCACGGCCAACCCAGAGCGGCTCATGAAGGAGTTCCTGCGTGGCTTTGAAGACCG
CATACGCTCCATCAAGGAGATGCAAGCCATCGCCAGAGAAGGCCTGGGGTCCTATCTCAGCAGCCGCACGTTCACCGAGG
TGTCCCTGAATCCTGCCATGGACATCATGTCCACGGACATCCTGCCCAACTACGACTGGTCCGTCTCCCGCGACGTCTTC
TCGGACCTCTACTCCAAGCAGATCGATCCTTCCACGCCACAGTACCGTCGCAACGCCTACTTCTTCGCCGAGGACAGGCT
CTGGGTCTGCTACCAACGTCTCTACACGAAGGCCGTGTTCCGTCTCTCCCCTGCTGGCGCCTTGCTCCATCTCCTCGGGT
TTCTCTCCACCTCGGCGGCCATGGCGCTCTTCTTCATGGCCGGTAAAAGCGGCTACGGCGGAGCTGACGTCGCCGTGTCC
ACCGTGTTGCTCGTAGGCGCCGTCACTTTGGAGGCAACCTCCTTCGTCATGTCCATGTTCTCCCGCGAAGACCTCTGGAG
GCACCCGCTCTGCTGCTCCGGCAAGCTCCCTGTGATCCACTGCGTCTTCTTCATCACCTGCGGGACTTGCGCTGATTCGC
TAAGGAGGAGGTGGCGGAGACCGCAGTGGTCCAAAACACTAACGCAGTACAGCATCATCCAGAGATCCGTCAAGAGAGCT
TCCGGCAGCTCAATGGTGCCGCGGTGGGTCGTCGAGCGCCTGAGCCCGAGCGCGTCTGGCGTCGAGCGCATTCCCGTCGC
CGACGACCTCAAGCACCTGGTCGTCAAGAAACTGCTAGACGATAAGATGATGGCGACGGACTTCACCAGCTCGCGGGGCG
AGGTGGCGCTGGGGAGGCGGTGGGCTGATCAGCAGCCGCCAGAGAGCCTCAGCCTGTCAGAGAAGGTCCTAAGCGAGAGT
GTGAAGGAAGTGGATTTCCCAACCAGCGTGCTCATCTGGCACATTGCCACGGACATACGCTTCTTCACCGACGCTGCCGG
CGAGGCCTCCGCCGACAGAACCATTATTAGCAGGCAGCTCTCAGGTTACATCATGTACCTCATCTTCAAGTGCGGCGTCA
TGCTCAGCAGCAACTCCAAGTTCCTGCTTCGCAAAGCCGGTGATGAGATCACCGCTCTTGTCAAGGCTGGGCGGCGAGAT
GATCGGGATGAACAACATGATGGATCATCATCCCGTGGTAAGAAAGCCAAAGGCATAGCCATGGCCGTGCAGCATTTGGT
GGGATCGCCGCTGTTCGCGCAGGCACGCTCT---TCAGACACAGTGCCGGCCAACCCCAGCACCGCTGATATCCTCGGTG
ACCCGGTGCTGCCTCGCGCGTTCAGGGTGGCCGAGTCGCTGGCCGGCGTCCCGGAAGCCGATCGCTGGGGGCTCATCGTC
GACGTCTGGCTGGAGATGCTCTACTACATTGCGCCTCGCTGCGGGGCCGCGTTCCATCGCGAGCATCTCAGCACCGGTGG
GGAGTTCATCACGCATGTCCTCGTCGTAATGTATACCATAGGCCCCCTCGGCTATCACCCAAGTCTGCTTAAGTTTGGAC
CTCACTAGTACTGCACGTTGCACGCGTATCCTGAAAGTTTTAGAGCATACAAGTCGTGCGGGTATGGCACCGGCGC----
-----------CCGACCCCGAGCGACCACCGGCCGCTACTGCTGCGGGCGGGAGCCCCCAACGAGCGCCGCCGCGACTGA
TGGATTTGGTGGCACCACCGGCGGCT--GCTGCTTCAGATTCGTCACTTTCAGTTTGACAGTGTCATGTTTGATAAATTC
AGTTTCGTCGGAGAACAAATGTTTGACAGTGTGATGCTTGATAGTGATTGCAATTTCAGATTCTTCAAAGAACAACCACT
ATCTAACTTCAGTTTCGTCAGAGAACAATCACCGTTGAACTTGATTGATATACTAGCATGTTGTTGTCATATTCAGATGT
TTTTATAGAACAAGTAGTTTGCATGTTTAAACTTCGGTCGAACTATGAGATATAGTTGAAGAATTTGAATGTTCGTTCAA
AAAAAATGGTTTTATTGATCTGGGTGCC--------CTATTTTAGGGATGTTGTTGGAGACGGCGCTTCCTCGTGCCCCC
TACCCTCTTACCCCCCAAAAAAA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TTTCATGGTCAATTCTTTTTACTCCACCCACTTTT
CATGCCTTATTATAGGGCTGTTGTTGGAAATGCCCTCAATGTGATATGTTGTATTGGATTCTACTGTCTACTACATACAA
TCAGAATTTTAAGAAGACTAATCATTTCACTGGTTAATTTATAAAACTGGAGAG-AAAAAATCTATCACCGCCAATTTGT
ACTAGAGTTTTCTATTTAGTGTCATATTAAAAAGGATATAAATTATCTCAATCTTTCACACGAAACAGGTTTTCACCCAG
CTTTATATGTAAAGCAACAACTGAACTGAGTACAAGGCCGAATGATACAAGATGAGGGGCAGCCCTAAAACAATGTCGAT
CCCATGATAACCGGATCACGCAGGATGCACGAAAATACACTATCGAAAGAGAGCCTAGGAAGAACTGAGTACAGCGTCAC
GCTAACCCCCTATAATACCTAAGTTCCACAACATTGCCCCCGAGAGGGAGAACGGTGCTAAGAGTCACCGCAGCCGAGTC
CTAGTGGACAAAGGTTTTCACCCTGAACCCCAACACGAG-
>SNPs
SSSSSSSSSSS--------------S-----------------S-----S----S-S----S-----------S------
----------------------S-----------------S-------S------------S-S----S-----------
-----------------S------------SS----S----S----------S------------S-SS-----------
------------S--S-------S----S-----------------S--------------------S--------S---
S-------------S------------S-----------------S----------S-------------S---------
------S------S---S-----S--S--SSS----------SS---------SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S-----S-----SS-------------S--S---S-----------
--------SS-S------S------S-------S-S-------S------S--S------S-------------------
-S-------S-------S---------------------------S----------S---------SS------------
------S-----------------------------------------------S----------------SSS------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S------------------S-------SS-SSSSSSSSSS------
-------------------------S-------------------------------------------S----------
-----------------S--S----------S-----------S--S---------------------S-----------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------S------
---------------------------------------------------------------S----------------
-------SSS-SS-----------------------------S-------------------------------------
--------S------SSS------S----------------------S--------------------------------
-----------------------------------------------------------SSSSSS---------S-----
-----S-----------S--------S-----------------------------------------------------
-------S------------------------------------------------------------------------
----------S---------------------------------------------------------------------
-----------SSS---------------------------------------------------------------S--
--------------------------------------------------------------------------------
-------------------------------S---------------------------------------S--------
----------------------------------------S---------------------------------------
S-------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
-S---------------------------------------S--------------------------------------
---------------------------S----------------------------------------------------
----------------------------------------S---------------------------------------
---S-----------------------S--------S--------S----------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
-----------S-----S--------------------------------------------------------------
----------------------------S--------------------------------------S------------
-----------------------------------S-----------------------------S--------------
-------------------------------SSS----------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-----------------------------------------------SS----------SSSSS
SSSSSSSSSSS----------------------------------------------S--S-----------------S-
-------------------------SSS------------------------------------S--S------------
------------------------------------S------S------------------------------------
--------------------------------S-----------------------------------------------
---------S----------------------------S---------S-------S-S------S--------------
----------------------------SSSSSSSS------------------------S------S----S--SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------
------------------------------S-------------------------------------------------
--S---------------------------------------------S-----S------------S------------
-------------------------------------------------S-----------------S------S----S
--------------------S------------------S---------------S-S-----------------S----
-------------------------SS------------S---------------------S-----------S------
--------------------------------------S-----S--------S-S------------------------
SS-S-----------------------------------S
>forward_269
--------------------------------------------------------------------------------
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---------ATGGTAAGGTTTCGGTGCCG---------------------------------------------------
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>reverse_1621
--------------------------------------------------------------------------------
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--------------------AAGTATTTTCGGGCGGAGGG----------------------------------------
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----------------------------------------
>forward_407
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TCTAGGACCCCTT
CGTCTGT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2027
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CTTGCATGCGTGTAGCTTGG----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>forward_1640
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------AAGTATTTTCGGGCGGAGGG----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------
>reverse_2688
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------GACTACGACTGGTCCGTCTC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>forward_1642
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GTATTTTCGGGCGGAGGGAG--------------------------------------
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----------------------------------------
>reverse_3113
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CGATTCGC
TAAGGAGGAGGT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------
>forward_1772
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CAAAGTC
CAGGTCCCGTCC--------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>reverse_3746
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TGTGCAGCATTTGGT
GGGAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>forward_3629
--------------------------------------------------------------------------------
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---------GCAACTCCAAGTTCCTGCTC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>reverse_5485
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------GGGGAGAACAGCGCTAAGAG----------------
----------------------------------------
