>input_sequence_23079
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-------------------------------------------------------ATGCAGGTTCCGGGAGACGTCGGCG
GGGGTGGAGGGGAAGCCGGGGACATGCGGGGCCGGCACCGGATCCAGGCCGAGCTCAAGAAGCTCGAGCAAGAAGCGCGC
TTCCTCGAGGTCCGCCCATGTCATCCTCGTTTCCATTGTTACCTTCTCTCTGAATATTGTTTCCGTTGTTAGCTTGTCTC
CGATATACTTCTATAAGGGAAAAAGAGTGATTGCTTTCTTGAATCTTTAGGCCTTTTCTTTGACTTTGTTTCGAAAATTG
TTGGGCTAAGAACGGCAATTCTCCTGAAGAAAAGCGGCACGCAAGCTTTTAGCTTTTCAGCCCCATGTTCTGAAGCATAG
AAACTAGTTTGGG-GTAGCAACTTCTT--------CGATCCCCATCCCTCACCATGCACCACGAAACCTTCGACATGGCA
GACCTCCGAGGTTCTCGCGGGTCCATCTCTCTCGCCTGCATTACCTTGCGTCCCATGGGGTAGGGGGGTGGGCCGCCGGT
GGTGGGGTGGGTGGGGGAGGGGGAGAAAGCGGTCAAAGGGCATATGTCCACATTCGGTGCCTCCTTGGTCGCGCACACCT
GCTTCAGGATTTCTTGCGGCAAATATTCAGTTCCGTACTAGTAGTATTTCCTGGGCCTTTTCTCTGACATGCACAGATCT
GTCCGGCTACATCCATCCCAGTTTCTCTGCTGAAGAAAACAAAACCGAATTTCTGCTGCGTCAAATGATTGTGCAGTGTA
CCACTGAGGAATTAACTAGTCGGAATGCACATGGGGTGAGGCGCGGCTGCTATGGCCTGAGGGGGACCTGGTGCATGGGG
AGCCATGTTTTCTATA-GTTCGCGCCAGTGCGTGATCCAATCGTTGGAAGTCATTGGAAGGAGAAATCGGTGCTGGATCA
ACGTGGTTACCCAAACACAAGATATGCCTTTTTATTCGCGGAACAGCTAAAACAAGTACTGTAGCAAAGCGTTTTCAGTT
TGTATGCTCATTAGTTTTGGTGGCAAGCTGGTATGCGGCCCATAAACTAGGGAACTGCTTAACAAATGCTCA--------
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---------------TATTATTTTGGTAGTCCTTACAAGTTAAGACCAACTTGGATAGTTTTGGTTTATTTACCTTTGGT
TATTATTCCGAAGTTGTACCACTCCCTCTTATCCAAAATAGGTGACGCGGTTTTGAGCTGGGGTTAGTTCAAAACTGCGG
CACTTATTATGAATTGAGGTTAGTAGTATTTTTTACACCCTTTGTCAGTTTGCATAGAGAATGAACATTGG---------
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-------------------CAATCTGAAGATTTTCATGCTCTATGAACAACTAAAGAAACATTTTCTAT--CTGTATGTT
ATTTGGTTACGTACTTAAGTTCTAATCGATTATGTTTCTATACTGCGATCAATTTCTTTAATTACAAAACTATGCTCATT
ATTATAACTACAGCGTTTTGTACTTGCAATTTCAAGTTATAATTAATGATGAATTTTCTTTATCACTCCAAGTTCTCATT
TATTGAAGTTCTTACAATCAGAGGCCAGATGAATATCATCATGAATAAAATTCATTTGTCTTATATATATATATGGTTCT
GGATGATATAGATTCAAGGACCAGGGCCATGGCATTGCTAGATGGATGTTATGCTGTAAAATTATTTGTCATCTTTTGTT
AAATCTATTGTATTTTCTTTTGCGAAGTATTGTTGCAAGTTCAAATTTGGAAAACGATATGAGTATTGAGTCTTGATTAA
GATGGAGTAACATAGTTCTTATCTGGTGGTAAATTCTACTGTCGACGTCCTATTATAATATAGTTAAAAATAAAAATAAT
TAACATATTCAATCAGTTTGACGACATATCCAAATATTTATCTATTCTGGCGGGGAATTTTCTTACCGTTTTGAAAGGTC
CAGAGAGAGACATGTAATTTCCTTTTTTACCTTTTCTATCAGCATCAGATCATTGGATTTATGAGAGACTGAGACTCAGA
TCATTGTATTATCAGCATCAGATCATTGGATCTATCAGCATCAGCATCAGACCATTTCTATCGACCTCTGTACTTTTGTA
CTGTTTAACTTATAGCTTACT----TGAGTAGTCATCTACGTACCACCTAGTCAGTAAAACTAGCAAGGATTAATGAGAG
ACTGAGAGTTTACAAACTAGTAACTATAACTAATAATACTATTGAGCTCACTTGTTAGATCCCAAGGGTGTTAAGCAAGC
TGTATTACCTATTTTGATGGCTAAGCACCAATGA--TTTTTCATTTTTGCTGAAGCTCAGGCTCATATGCTCCTTCATGC
ACAGTAAAACTGAAACAAATAGTAAAAAA-ACATTCCGAGGT----TTTTTTTGACAATGAAAATGCACGTGTGTTCTAA
CTGCGTGTAAAAAACAAAATGCAGTGCTCAAGGAAGGGCAATGAACTCGTTGTTTTGTGGCGCTGCGTGGTTGTGTTCCA
AAATAGCTTGGATAATGATGGACATGAACGAAAGCCATATTTATGTACAAATAAGTGAGAGCTCATGATGCTTCACTAGT
AGCAAATTCATTT---TGAACAGTACACTCAAACTTCTCCATTAGTGCCACATTTCAGGGATGCAAGCAGAGAATGCAAA
TTGCATAGCAGGGAAAAAACACAC-GTTTTAAAAATAAGTTCATTTGAAATTTCACAATAGAGATGCTACTGATGAGCTA
GGTATCTGTCCTTGACACAATTATCTGTATATCTGGCACAATAGAA----------------------------------
---TTTCTTGCAAGATATGGGTATTCCCTTCTCTGCCAAACTGCTGATATTCTCAATTGGACTTCATACAGGAGGAACTT
GAAGAGCTAAATAAGATGGATAAGGTGTCAACAGCACTGCAAGAGTACGTGTCAGTAAAACCCC-GATCAATTCACATTT
TACCATATGGTGTTACTGCTTAAAAAG---CACCCACAGTGTGTATAATTGGTGACTGGGGGCTGACTGCATTATTAACC
TTTTGTTAGGTTTGTAGTAACAATTGAAAGCAAAGCAGACCCTCTACTTCCTGTGTAAGTAACCACAAAAATATCATATT
AGTTTG------TCTATAGGATTATCTGAACATTTTTGTCAACTCATAGTCTAATAATGACTTATTTTTTCTGTAACTGC
AGAACTACTGGAGCTGCTTACCAGTCTTGGGACAGGTGGTTTGAAGGTCCGCAGGATCTGCGTAGATGCAAATGCTGGTT
TTTGTGA-------------------------------------------------------------------------
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>chr5D_1_TraesCS5D01G387700
GTCAAAAAATCTTTCGAATCCGTGTCAAATATAGCTCAAATCAAAAAAAATCCCAAACTGTAGAACCCTAGCCCTAGGCG
CAGAAAAGACTTACCCACATCTCCATGTCCATGCTGCAACCCATGTCTAGGTCGCCGTCCGTGCTATACTCCCCGTCCTT
CCATGACGGCATGGCTCATTGGCGACGAGCAGTGAGGTTGGCAGCAACGTCAAGCTGAGCAGAGAGATAGGGAGATTGGA
CAGCCGA--------GGGGGGAGAGAGAGAGAGAGA----------------GAGACGCATGCCCTTTTGACCGTGCAGG
GTGACAGAATGCTCACCGGCGACGAGCACTGCGCTGATCAGCGACATGGACCTGAGTAGACGAATAGAGAGGAGAGTGAG
CGACCAAGGAGAGTGGGCGACTCCGAGAGAGAGGGGCTCGGGCCCTTTTGACCTCCCAGGGTGACGACCGTTAATGGCCA
CGCCTGAGTGCTGA---------CGCGTGGGCCCGATCTGTCATAAACCTGGTCAAAGCTTAGTGATTCGGTCACCGGTG
CTTTTTGAAATAGAAAACCAAATTTGTGATAGTTTTCAGCGAATTTTAAAAAACATATAGTTTTTTGGAACCGTAACCTC
AATACCGGTAGTTTTAAGCC-----ATACAGCACTCCGCAAAATCGTCTCCAAAACCAACCCTTCTATCACAAAATCACA
AATCATATATCCGGAATATGACTGCCAATACATTGATCCACCGCTCCACTGTA---------------------------
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-------------------------TTATCAGTCCATCCGTCGTCGTCACAAGGAAACCTTTTCGAAAACCAAAAAAGAG
TCTTTCCGCCGTCCGCGCATTCCGTGACACCGCTTGGTTTGGTTGGCTTCGC----AGTGCAGCCCAACCCACGCACGCA
TCTGCCAGA-TGCGCTTGGCTGCGCGTGTCTGCCCGCCCCACCCACTATTCTATACTCCGAGCCATCGTCCAGCAGACAG
ACCAGCAGCGCGGAGTGGAGGTCCTCTCGCTGCCGGCGCCACTCCTCTCGCGGCGATGCAGGTTCCGGGAGACGTCGGCG
GGGGTGGAGGGGAAGCCGGGGACATGCGGGGCCGGCACCGGATCCAGGCCGAGCTCAAGAAGCTCGAGCAAGAAGCGCGC
TTCCTCGAGGTCCGCCCATGTCATCCTCGTTTCCATTGTTACCTTCTCTCTGAATATTGTTTCCGTTGTTAGCTTGTCTC
CGATATACTTCTATAAGGGAAAAAGAGTGATTGCTTTCTTGAATCTTTAGGCCTTTTCTTTGACTTTGTTTCGAAAATTG
TTGGGCTAAGAACGGCAATTCTCCTGAAGAAAAGCGGCACGCAAGCTTTTAGCTTTTCAGCCCCATGTTCTGAAGCATAG
AAACTAGTTTGGG-GTAGCAACTTCTT--------CGATCCCCATCCCTCACCATGCACCACGAAACCTTCGACATGGCA
GACCTCCGAGGTTCTCGCGGGTCCATCTCTCTCGCCTGCATTACCTTGCGTCCCATGGGGTAGGGGGGTGGGCCGCCGGT
GGTGGGGTGGGTGGGGGAGGGGGAGAAAGCGGTCAAAGGGCATATGTCCACATTCGGTGCCTCCTTGGTCGCGCACACCT
GCTTCAGGATTTCTTGCGGCAAATATTCAGTTCCGTACTAGTAGTATTTCCTGGGCCTTTTCTCTGACATGCACAGATCT
GTCCGGCTACATCCATCCCAGTTTCTCTGCTGAAGAAAACAAAACCGAATTTCTGCTGCGTCAAATGATTGTGCAGTGTA
CCACTGAGGAATTAACTAGTCGGAATGCACATGGGGTGAGGCGCGGCTGCTATGGCCTGAGGGGGACCTGGTGCATGGGG
AGCCATGTTTTCTATA-GTTCGCGCCAGTGCGTGATCCAATCGTTGGAAGTCATTGGAAGGAGAAATCGGTGCTGGATCA
ACGTGGTTACCCAAACACAAGATATGCCTTTTTATTCGCGGAACAGCTAAAACAAGTACTGTAGCAAAGCGTTTTCAGTT
TGTATGCTCATTAGTTTTGGTGGCAAGCTGGTATGCGGCCCATAAACTAGGGAACTGCTTAACAAATGCTCA--------
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---------------TATTATTTTGGTAGTCCTTACAAGTTAAGACCAACTTGGATAGTTTTGGTTTATTTACCTTTGGT
TATTATTCCGAAGTTGTACCACTCCCTCTTATCCAAAATAGGTGACGCGGTTTTGAGCTGGGGTTAGTTCAAAACTGCGG
CACTTATTATGAATTGAGGTTAGTAGTATTTTTTACACCCTTTGTCAGTTTGCATAGAGAATGAACATTGG---------
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-------------------CAATCTGAAGATTTTCATGCTCTATGAACAACTAAAGAAACATTTTCTAT--CTGTATGTT
ATTTGGTTACGTACTTAAGTTCTAATCGATTATGTTTCTATACTGCGATCAATTTCTTTAATTACAAAACTATGCTCATT
ATTATAACTACAGCGTTTTGTACTTGCAATTTCAAGTTATAATTAATGATGAATTTTCTTTATCACTCCAAGTTCTCATT
TATTGAAGTTCTTACAATCAGAGGCCAGATGAATATCATCATGAATAAAATTCATTTGTCTTATATATATATATGGTTCT
GGATGATATAGATTCAAGGACCAGGGCCATGGCATTGCTAGATGGATGTTATGCTGTAAAATTATTTGTCATCTTTTGTT
AAATCTATTGTATTTTCTTTTGCGAAGTATTGTTGCAAGTTCAAATTTGGAAAACGATATGAGTATTGAGTCTTGATTAA
GATGGAGTAACATAGTTCTTATCTGGTGGTAAATTCTACTGTCGACGTCCTATTATAATATAGTTAAAAATAAAAATAAT
TAACATATTCAATCAGTTTGACGACATATCCAAATATTTATCTATTCTGGCGGGGAATTTTCTTACCGTTTTGAAAGGTC
CAGAGAGAGACATGTAATTTCCTTTTTTACCTTTTCTATCAGCATCAGATCATTGGATTTATGAGAGACTGAGACTCAGA
TCATTGTATTATCAGCATCAGATCATTGGATCTATCAGCATCAGCATCAGACCATTTCTATCGACCTCTGTACTTTTGTA
CTGTTTAACTTATAGCTTACT----TGAGTAGTCATCTACGTACCACCTAGTCAGTAAAACTAGCAAGGATTAATGAGAG
ACTGAGAGTTTACAAACTAGTAACTATAACTAATAATACTATTGAGCTCACTTGTTAGATCCCAAGGGTGTTAAGCAAGC
TGTATTACCTATTTTGATGGCTAAGCACCAATGA--TTTTTCATTTTTGCTGAAGCTCAGGCTCATATGCTCCTTCATGC
ACAGTAAAACTGAAACAAATAGTAAAAAA-ACATTCCGAGGT----TTTTTTTGACAATGAAAATGCACGTGTGTTCTAA
CTGCGTGTAAAAAACAAAATGCAGTGCTCAAGGAAGGGCAATGAACTCGTTGTTTTGTGGCGCTGCGTGGTTGTGTTCCA
AAATAGCTTGGATAATGATGGACATGAACGAAAGCCATATTTATGTACAAATAAGTGAGAGCTCATGATGCTTCACTAGT
AGCAAATTCATTT---TGAACAGTACACTCAAACTTCTCCATTAGTGCCACATTTCAGGGATGCAAGCAGAGAATGCAAA
TTGCATAGCAGGGAAAAAACACAC-GTTTTAAAAATAAGTTCATTTGAAATTTCACAATAGAGATGCTACTGATGAGCTA
GGTATCTGTCCTTGACACAATTATCTGTATATCTGGCACAATAGAA----------------------------------
---TTTCTTGCAAGATATGGGTATTCCCTTCTCTGCCAAACTGCTGATATTCTCAATTGGACTTCATACAGGAGGAACTT
GAAGAGCTAAATAAGATGGATAAGGTGTCAACAGCACTGCAAGAGTACGTGTCAGTAAAACCCC-GATCAATTCACATTT
TACCATATGGTGTTACTGCTTAAAAAG---CACCCACAGTGTGTATAATTGGTGACTGGGGGCTGACTGCATTATTAACC
TTTTGTTAGGTTTGTAGTAACAATTGAAAGCAAAGCAGACCCTCTACTTCCTGTGTAAGTAACCACAAAAATATCATATT
AGTTTG------TCTATAGGATTATCTGAACATTTTTGTCAACTCATAGTCTAATAATGACTTATTTTTTCTGTAACTGC
AGAACTACTGGAGCTGCTTACCAGTCTTGGGACAGGTGGTTTGAAGGTCCGCAGGATCTGCGTAGATGCAAATGCTGGTT
TTTGTGACAAAATGTCAAGA---------------ATGCAAGCAGCAGCGAGGACCGATTCATTTCCCATAGAGTTTCTT
CACAATCTCTGTTGAAGGAGCGGTATGAGAAGGGTACTGTGGAACACGGAGGCAGCACTGAGGACTGACTTAAGACTTTG
TTCTTCAATAAGTTCTTTCTGTCTACTGCATTCCTGTGCATTACATTATCTCTGGTGCTGGTGAAGTATGAGATCTTAGC
TCAAGAATGTCGTCCTAGTCTGAGAAATTATATGAACTCTCTTGTTTTTCCACCTAGTTATCATGTTGTTGGATATTCTG
AAATCAACGTCGAACAATGAAAATTGACGATTATTTCTCTT---TCTGAACTGTGACAAAAAAAAA-AAGCATGGATGTA
TGTTTGTTGCTGTGAATGGAACTTCTGCTATTTTGTGAGTCTGATTATCTGATTACAACATGAGGAACATGCAACCTTCC
ATTTGACATTTTTTTGAGGATTACCTACCATTTGACTTTGCCACTGGAGCCTGCCCAGACTTGAGTG-AAAAGCCCAATC
CTAATTTGGCCCAACCAAATACTGGTAAGC-AAGCACAAGATAGGCCACAAGTGAGGAGGTGACCTTATCCGAAGAAAGC
CA------------TGGCAGTGGCGCACACAGTCACCACCTTCACAGCCAGAAAGAACCCGAGCAATTACCAGAGTACAG
AGGATGGCAATGGCGCCAGTGCCATCGCCCGCAAGCGCTTCTTCCTCCACCACCTCCCATCTCCTCCCGTCCTCCCCATC
CATCTCTGCCTTCCTTGCCTCACACCCGGCCCTCACCCTCCTCCACACGCAATGCGCCACCATGGCTCACCTCCGCCAGC
TCCACGCCGCGCTCGTCAAGTCTGGCCTCGCCAAAGACCCCATCGCCGCCAGCCGCGCCGTCGCCTTCTGCGCCGGCGAA
GGACGCGACGCTGCCTACGCCGCGCGCATCGTGAGGCACCACCCGAGGCCCAACTCCTTCATGTGGAACACCGTCATAAG
>chr5B_1
GTCAAAAAATCTTTCGAAACCGTGTCAAACATAGCTCAAATCAAAAAATTCCCCAAACTGCAGAACCCTAACCCTTGGCG
CAGAAAAGACTTACCCACATCTCCATGTCCATGCTGCAACCCATGTCTAGGTCGTCGTACATGTTGTCCTCCCCGTCCTT
CCATGACGGCATGGCTCATTGGCGACGAGCAGTGAGGTTGGCAGCGACGTCAAGCTGAGCAGAGAGATAGGGAGACTGGG
CAGCCGA--------GGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGCATGCCCTTTTGATCATGCAGG
GTGACAGAATGCTCACTGGCGACGTGTACTGCGCTGATCGGCG-CGTGGAGCTGAGTAGACGAACAGAGAGAAGAGTGAT
CGACCAAGGGGAGTGGGCGACTCCGAGAGAGAGGGGCTCCGACCCTTTTGACCTCTCAGGGTGATGGTTGTTAATCGCCA
CGCCTGAGTGCTGACGTACCTGATGCGTGGGCCCGATCTGTCATAAACCTGGTCAAAGCTTAATGATTCGGTCATCGGTG
CTTTTTGAAATAGAAAACCAAATTTGTGATAGTTTTCAGTGGATTGTACAAAACATATAA-TTTTTTGAACCGTAACTTC
AATACCGTTAGTTTTAAGCTATATAATATAGTACTCTGCAAAATCGTCTCCAAAACCAACCCTTATTTCACAAAATCACA
AATCATATCTGGAATATATGACTGCCAAAACATTGATCCACCGCTCCCCTTTAGAGCAAGTACAATAGAGCTGAGTCAGC
GGGCTATAAGGAATAAACTAGTATATTTCTGCTTAGTTGAAGGAAAGAGAAGAGGAGAGAGAAGGTAAGCGATCTCTTCG
TGAAGAGCCGGCTCTAGCACGTGCTCTTAGGCACTTTGTGAGAATGAAAGATGGGCCACGTAATAAAAAAAATAGTACAC
TCTTTTGATCTACTATTGTACATGTTAACTATAAGATGAGTTGTAGATGACATGGCACTGGCTTATAGCCAGCAGCTGGT
TATACTTACTATTAACCATGCTC---------------------------------------------------------
-------------------------TTATCGGTCCATCCGTCGTCGTCACAAGGAAACCTTTTCGAAAACGAAAAAAGAG
CCTTTCCGCCGTCCGCGTATTCCGTGACACCTCTTGGTTTGGTTGGCTTCGC----AGTGCAGCCCAACCCACGCACGCA
TCTGCCAGTTTGCGCTTGGCTGCGCGTGTCTGCCCGCCCCACCCACTATTCTATACTCGGAGCCATCGTCCAGCAGACAG
ACCAGCAGCGCGGAGTGGAGGTCCTCTCGCTGCCGGCACCACTCCTCTGGCGGCGATGCAGGTTCCGGGCGACGTCGGCG
GGGGTGGAGGGGAAGCGGGGGACATGCGGGGTCGGCACCGGATCCAGGCCGAGCTCAAGAAGCTCGAGCAAGAAGCACGC
TTCCTCGAGGTCCGCCTATGTCATCCTTGTTTCCATTGTTACCTTCTCTCTGAATATTGTTTCCGTTGTTAGTCTGTCTC
CGATATAT------AAGGGGAAAAGAGTGGTTGCTTTCTTGAATCTTTGGGCCTTTTCGTTGACTTTGTTTCGAAAATTG
TTGGCCTAAGAACGGCAATTCT-CTGAAGAAAAGCGGCACGGAAGCTTTTAGCTTTTCAGCCCCATGTTCTGAAGCATAG
AAACTAGTTTGGG-GTAGCAACTTCTTCGATCCGACGATCCCCATCCCTCACCATGCGCCACGAAGACCTCGACATGGCT
GACCTCCGAGGTTCTCGCGCGTCCATCTCTCTCGCCTGCATTTCCCTGCGTCCCATGGGGTAGGGGGTGG----GCCGCG
GGTGGGGTGGGTGGGGGAGGGGGAGAAAGCGGTCAAAGGGCATATGTCCACATTCGGTGCCCCCTTGGTCGCGCACACCT
GCTTCAGGATTTCTTGCGGCAAATATTCAGTTCCGTACT---GGTATTTCCCGGGCCTTTTCTCTGACATGCACAGATCT
GGCCGGCTATATCCGTTCCAGTTTCTCTGCCGAAGAAAACAAAAGCGAATTTCTGCTGCGTCAAATGATTGTGCAGTGTA
CCACTGAGGAATTAACAAGTGATGATGCACATGGGGTGTGGCGCGGCTGCTGTGGCCTGCGGGGGACCTGCTGCATGGGG
AGCCATGTTTTCTATA-GTTCGTGCCAGTGCGTGATCCAATCGTTGGAAGTCATTGGAAGGAGAAATCGGTGCTGGATCA
ACGTGGTTACCCAAACACAAGATATGTCTTTTTATTCATGGGACAACTAAAACGAGTACTGTAGCAAAGCGTTTTCAGTT
TGGATGCTCATTAGTTTAGGTGGCAAGTTGGTATGCGGCCCATAAACTAGGGAACTGCTTAACAAATACTCGTACTCCCT
CCATTCCTAAATATAGGATGTATAGTTTTTGGCACGGAAATTAAAGAACGCATATTGAGGGGAAATTTCACAACTTTTGG
GCGAGATTTCACCTGACTAATTGACATGAGAAAATAGAGGACCTTGCCTAATATAAGGAAATGTAATCAAATCTCTAAAA
GAAATATCCTAATGAGTGGTGCAATGCAATACACCTTATATTTCGGATTTTTTTTCTCAAAAATTTATACACCTTATATC
AAGGAACGGGGGGAGTATTATTTTGGTAGTTCTTACAAGTTAAGACCAACTTGGATAGTTTTGGTTTATTTACCTAA-GT
TATTATTCCAGAGTTGTACCACTCCCTTTTATCCAAAATAAGTGTCGCGGTTTTGAACTGGGCTTAGTTCAAAACTGCAA
CACTTATTATGGGTCGGAGGTAGTAGTAATTGTTACACCATTTCCCTG-TTGCAGCGCGAATGATAATTGGGATGTCACC
CTAGCACAATATGATATAGTTACTAGTATGTGTGCACGTGCAATGCACGTCTTAAAAGAATGAGGTGATTTTGAAGCATG
ACTCGAAAAAAGTATAACAGAGTGATTTTGATAAATGGAATTTCACCCACAATTGTTTTTAATATTCACACAAAAAATTG
TACATTCACATCTAAAATATTGTAGGTTCATTAAAAAAATGTATGTTACTCTATCTTTTTTTTCTTCCCATTCTCCTCCC
AAACCATCTTATCTGGGCTCAAGTCGTCATCCGCTCAAACGGTAATATGGCCCATGAGGCATCACATATGGGCATTTTTT
TTCCTGGAAGGGCCACGTGAATGTTCTAGAACAGAATAGAGGCAACATCAGTCTATTGTTCATGGCAAATCCAGCTGATC
TTAGCCCTTGGATTTTAGAGACCAACGGTATGATTGATGCTCTGGATCCATTTCAAAATTGGTACACTATAGAGTAGTAT
AGATATAGGAGGGCTTTGGCAATCTGAAGATTTTCATGCTCTATGAACAACTAAAGAAACTCTTTGTATTACTGTATGTT
ATTTGGTTACGTGCTTAAGTTCTAATCAATTATGTTTCTATACTGCGATCAATTTCTTTAATTACAAAACTATGCTAATT
ATTATAAATGCAACATTTTGTACTTGTAATTTCAAGTTATAATTAATGATGAATTTTCTTTATCACTCCAAATTCTCATT
CATTGAAGTTCTTACAATCAGACGCCAGATGAATATCGTCATGAATAAAATTCATTTGTCTTCTATATATATATGGTTCT
GGATAATCTAGATTCAAGGACCAGGGCCATGGCATTGATAGATGAATGTTATGCTACAAAATATTTTGTCATCTTTTGTT
AAATCTATTGTATTTTCTTTTGCGAAGTATTCTTGCAAGTTCAAATTTGAAAAACGACATGAGTATTGAGTCTTGATTAA
GATGGAGTAACATAGTTCTTATCTGGTGG-AAATTCTACTGTCGACATCCTATTATAATATAGTTAAAAATAAAAACAAT
TAACACATGCAATCAGTTTGATGACACATCCAAATATTTATCTATTCTGACGGGGAATTTTCTTACCATTTTTAAAGGTT
CAGAGAGAGACATGTAACTTCCATTTTTACCATTTCTATCAGCATCAGATCATCGGGTGTCAAATGACTCAA--------
-----------------------------------------------------------ATCGACCTCTGTACTTTTGTA
CTGTTTAACTTATACCTTACTTAAGTGAGTAGGCATCTACGTACCACCTAGTCAGTAAAACTAGCAAGGATTTATGAGAG
ACCGAGAGTTTACAAACTAGTAACTATAATTAATAATATTATTGAGCTCACTTGTTAGATCCCAAGGGTGTTAAGCAAGC
TGTATTACCTATTTTGATGGCTAAGCACCAGTGATTTTTTTCATTTTTGCTGAAGCTCAGGCTCATATGCTCCTTCATGC
ACAGTAAAATTGAAACAAATAGTAAAAAA-ATCAAAACATTCTGACTTTTTTTTACAATGAAAATGCACGC--GTTCTAA
CTGCGTATAAAAAGCAAAATGCAGTGCTCAAGGAAGGGCAATGAACTCAATGTTTTGTGGTGCTGCGTGGTTGTGTTCCA
AAATAGCTTGGATAATGGTGGACATGAACGAAAGCCATCTTTATGTACAAATAAGTGAGAGCTGATGATGCTTCACTAGT
AGTAAATTCATTT---TGAACAGTACACTCAAACTTCTCCATTAGTGTCACATTTCAGGGATGCAAGCAGAGAATGCTAA
TTTCATAGCAGGGAAAAACCACAC-GTTTTAAAAATAAGTTCATTTGAAATTTCACAATAGAGATGCTATTGATGAGCTA
GGTATCTGTCCTTGACATAATTATCTGTAGATCTGGCACAATAGAA----------------------------------
---TTTCTTACGAGATATGGGTATTCCCTTCTCTGCCAAACTGCTGATATTCTCAATTGGACTTCATACAGGAGGAACTT
GACGAGCTAAATAAGATGGATAAGGTGTCAACAGCACTGCAAGAGTACGTGTCAGAAAAAACTCAGATCAATTCACATTT
TACTGTATGGTGTTACTTCTTAAAAAGCACCACCTACACTCTGTATTATCGGTGACCGGGGGCTGACTGCAGTATTAACC
TTTTGTTAGGTTTGTTGTAACAATTGAAAGCAAAGCAGACCCTCTACTTCCTGTGTAAGTAACCACAAAAATATCCTACG
AGTATTACTTTATCTAAGGGATTATCTAAACATTTTTGTCCACTCATAGTCTAAT---GACTTCTTTTGTTTGTAACTGC
AGAACTACCGGAGCTGCTTACCAGTCTTGGGATAGGTGGTTTGAAGGTCCGCAGGATCTGCGCAGATGCAAATGCTGGTT
TTTGTGACAAAATGCCAAGTAAGAGTGACACCAAGACGCAAGCAGCAGCGAGGACCGATTCTTTTCCCATAGAGTTTCTT
CACAATCTCTGTTGAAGGAATGGTATGAGAAGGGTACTGTGGAACACGGAAGCAGCACCGAGGACTGACC-AAGACTTTG
TTCTTCAATAAGTTCTTTCTGTCTATTGCATTCCTGTGCATTGCATTATCTCTGGTGTTGGTGAAGTATGAGATCTTAGC
TCAAGAATGTCGTCCTAGTCTGAGAAATTATATGAACTCTCTTATTTTTCCACCTAGTTATCATGTTGTTGGATATTCTG
CAATCAACGTCGAACAATGAAAATTGACGATTATTTCTCTTATTTCTGAACTGTGACAAAAAAAAAGAAGCATGGATGTA
TGTTTGTTGCTGTGAATGGAACTTTTGTTATTTTGTGAG--------TCTGATTACAACATGAAGAATATGCAACGTACC
ATTTGAC------------------------------TCTGCCCATA------------CTTTGAGTAAAAAGCCCAAAC
CTAATTCGGCCCAGCCAAATACTGGTAAAGGAAGCACAAGAT-GGCCACAAGTGAGGAGGTGACCTTATCCGAAGAAAGC
CA------------TGGCAGGGGCGCACACAG---------TCACCGCCAGAAAGAACCCGAGCAATTACCAGAGTACAG
AGGATGGCAATGGC------GCCATCGCCCGCAAGCGCTTCCTCCTCCACCACCTCCCCTCTCCTTCCCTCCTCCCCATC
CATCTCTGATTTCCTTGCCTCCCACCCGGCCCTCACCCTCCTCCACACGCAATGCGCCACCATGGCTCACCTCCGCCAGC
ACCACGCCGCGCTCGTCAAGTCTGGCCTCGCCAAAGACCCCATCGCCGCCAGCCGCGCCGTCGCCTTCTGCGCCGGCGAA
GGACGCGACGCTGCCTACGCCGCGCGCATCGTGAGGCACCACCCGAGGCCCAACTCCTTCATGTGGAACACCGTCATA--
>chr5A_1
GTCAAAAAATCTTTTGAATCCGTGTCAAACATAGCTCAAATCAAAAAATTCCCCAAACTGTAGATCC-------TAGGCG
CGGAAAAGACTTACCCACATCTCCATGTCCATGCTACAACCCATGTCTAGGTTGTCGTCCGTGTTGTCCTCCCCGTTCTT
CCATGACGACATGGCTCACTGGCGACAAGCAGTGAGGTTGGCGGCGACGTCAAGCTGAGCAGAGAGATAGGGAGACCGAG
CAGTCGATGGGAGTGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA----CGCATGCCCTTTTGACCATGCAGG
GTGACAGAATGCTCACCGACGACGAGCACTTCACTGATCGGCGACGTGGAGCTAAGTAGACGAACAGAGAGGAGAGTAAG
CGACCAAGGGGAGTGGACGACGCCGAGAGAGAGGGGCTCAGGCCCTTTTGACTGCCTAGCGTGACGGCCGCTAATGGCCA
CACCTGAGTGCTGACATACCTGACGCGTATGCCCGATTTGTCATTAACCTTGTTAAAGCTTAACGTTTCGGTCACCAGTG
TTTTTTAAAATAGA-AACCAAATATGTGATATTTTGCAACGAATTGTAGAAAACAGATAGTTTTTTGGAACCGTAACTTC
AATACCGGTAGTTTTGAGCTATATAGGACTCCACA----AAAATCGTCTCCAAAACCAACCCTTCTTTCACAAAATCACA
AATCTTTTT--CGCAATATGACTGCCAAAACATTGATCCACCACAGCTAAATTTTATATTTTGACCTTTTTCTAAAAGTT
GATTAAGATCTGACCCTACTTTGCAAAAATTTCGGGATCTGATCCTTATGCTACCGCCAAGGACCGTGGCGGTAGGGTTG
CATGTCCTACCGTAAAAAATTTCGAAGTATGAAACATAGTGTGTGCTCGCATCTATTGCCGGACACCTTGGCGGTAGGGT
TGTACAGCTTACCGCCTGCCTGTTTGGCGATAGGGTGTTTCCTACCGGGCTGTCACACCCTACCGTCATGGACCTTGACG
GTAGCAAAAAGGTCAGATTCCGAAATTTTTACAAACTAGGATCAGATCTCGTTCAACCTCGAGAAATGGGTCAAAACAGG
AAAATTTGCCATCGACCGCTGCCCTTTATCAGTCCATCCGTCGTCGTCACAAGGAAACCTTTTCGAAAACGAAAAAAGAG
CCTTTCCGCCGTCCGCGCATTCCGTGACACCTCTTGGTTTGGTTGGCTTCGCTCGCAGTGCAGCCCAACCCACGCACGCA
TCTGCCAGTTTGCGCTTGGCTGCGCGTGTCTGCCCACCCCACCCACTACTCTATACTCCGAGCCATCGTCCAGCAGACAG
ACCAGCAGCGCGGAGTGGAGGTCCTCTCGCTGCCGGCGCCACTCCTCTCGCGGCGATGCAGGTTCCGGGCGACGTCGGCG
GGGGTGGAGGGGAAGCCGGGGACATGCGGGGCCGGCACCGGATCCAGGCCGAGCTCAAGAAGCTCGAGCAAGAAGCGCGC
TTCCTCGAGGTCCGCCCATGTCACCCTCGTTTCCATTGTTACCTTCTCTCTGAATATTGTTTCCATTGTTAGTTTCTCTC
GGATATAC------AAGGGGAAAAGAGTGGTTGCTTTCTTGAATCTTTGGGCGTTTTCTTTGACTTTGTTTCGAAAATTG
TTGGGCTAAGAACGGCAATTCTCCTGAAGAAAAGCGGCACGGAAGCTTTTAGCTTTTCAGCCCCATGTTCTGAAGCATAG
AATCTAGTTTGGGGGTAGCAACTTCTT--------CGATCCCCAACCCTCACCATGCACCACGAAAGCTTCGACATGGCT
GGCCTCCGAGGTTCTCGCGCGTCCATCTTCTCCGTCTGCATTTCCTTGCGTCCCATGGGGTAGGG-GTGG----GCCGCC
GGTGGTGGGGTGGGGGT-GGGGGAGAAGGCGGTCAAAGGGCATATGTCCACATTCGGTGTCCCCTTGGTCATGCACACCT
GCTTCAGGATTTCTTGCG-CAAATATTCAGTTCCGTACC---AGTATTTCCT-GGCCTTTTCTCTGACAGGCACAGATCT
GTCCGGCTACATCCGTTCCAGTTTCTCTGCTGAAGAAAACAAAACCGAATTTCTGCTGCATCAAATGATTGTGCAGCGTA
CCACTGAGGAATTAACAAGTGATGATGCACATGGGGTGAGGCGCGGCTGGTGTGGCCTGCGGGGGACCTGATGCATGGGG
AGCCATGTTTTCTACTGGTTCGTGCCAGTGCGTGATCCAATCGTTGGAAGTCATTGGAAGGAGAAATCGGTGCTGGATCA
ACGTGGTT-----------------------TTATTCGTGGAACAGCTAAAACAAGTACTGTGGCAAAGCGTTTTCGGTT
TGGATGCTCCTTATTTTAGGTGGCAAGTTGGTATGCGGTCCATAAACTAGGGAACTGCCTAACTAATACTCA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TATTTTTTTGGTAGTTCTTACAAGTTAAGCCTAACTTGGATAGTTTTGGTTTATTTACCTTTGGT
TATTATTCCAAAGTTGTACCACTCCCTCTTATCCAAAATAAGTGTAGCAGTTTTGGATTGGGGTTAGTTCAAATCTCCGA
AACTTACTATGGATCGGAGGTAGTAGTATTTTTCACACC-TTTGCCAG-TTGCAGAGAGAATGAACATTGGGATGTCACC
CTAGCACAACATGATATAGTTATAC-------------------------------------------------------
--------------------------------------------------------------------------------
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------AGGAGGGCTTTGGCAATCTGAAGATTTTCATGCTCTATGAACAACTAAAGAAACATTTTCTATTACTGCATGTT
ATTTGGTTATGTGCTTAAGTTATAATCAATTGTGTTTCTATACTGCAAGCAATTTCGTTAATTACAAAACTATGCTCATT
ATTATAACTACAACGTTTTGTATTTGCAATTTCAAGTTATAATTAATGATCAATTTTCTTTATCACTCCAATTTCTCATT
TATTGAAGTTCTTACAATCAGATGCCAGATGAATATCATCATGAATAAAATTCAATTGTCTTCTATATATAT--GGTTCT
GGATTATCTAGATTCAAGGACCAGGGCCATGGCATTGCTAGATGAATGCTAGA----AAATTATTTTGTCATCTTTTGTT
AAATCTATTG-ATTTTCTTTTGTGGAGTATTCTTGCAAGTTCAAATTTGAAAAACGATATGAGTATTGAGTCTTGATTAA
GATGGAGTAACATAATTCTTATCTGGTGGTAAATTCTACTGTCGACATCCTATTATAATATAGTTAAAAATAAAAATAAT
TAACATATGCAATCAGTTTGACGACA-ATCCAAATATTTATCTATTCTGGCGGGGAATTTTCTTACCATTTTTAAAGGTC
CGAAGAGAGACATGTAATTTCCTTTTTTACCATTTCTGTCAGCATCAGATCATTGGATCTCA------------------
----------------------------------------------------------TATCGACCTCTGCACTTTTTTA
CTGTTTAACTTATACCTTACTTAAGTGAGTAGTCATGTACGTACCACCTAGTCAGTAAAACTAGCAAGGATTTATGAGAG
ACTTAGAGTTTACAAAATAGTAACTATAATTAATAATACTATTGAGCTCACTTGTTAGATCCTAAGGGTGTTAAGCAAGC
TGTATTACCTATTTTGATGG-TAAGCACCAATGA--TTTTTCACTTTTGTTGAAGCTCAGGCTCATATGCTCCTTCATGC
ACAGTAAAATTGAAACAAATAGTTAAAAAAATCAAAACATTCTGAGTTTTTTTTACAATGAAAATGCACGTGTGTTCTGA
CTGCATGTAAAAAACAAAATGCAGTGCTCAAGGAAGGGCAATGAACTCGTTGTTTTGTGGTGCTGCGTGGTTGTGTTCCA
AAATAGCTTGGATAATGGTGGACATGAACGAAAGCCGTCTTTATGTACAAATAAGTGAGAACTGATGATGCTTCACTAGT
ACTAGTAAATTCACTCTGAACAGTACACTCAAACTTCTCCATTAGGGCCACATTTCA-GGGTGCAAGCAGAGAACGCTAA
TTGCATAGCAGGGAAGAAATCGCATGTTTCAAAATTAAGTTCATTTGGAATTTCATAATAGAGGTGCTATTGATGAGATA
GGTATCTGTCCTTGACATAATTATCTGTAGATGTGGCAAAATTTACTTTCTTGAAATAATTTACAACTGCTAAGGATGTT
TGTTTTCTTAAAAGACATGGGTATTCCCTTTTCTGCCAAACTGCTGATATTCTCAATTGGACTTCATACAGGAGGAACTT
GAAGAGCTCAATAAGATGGATAAGGTGTCAACGGCACTCCAAGAGTACGTGTCAGAAAAAACTC-GATCAATTCACATTT
TACTGTCTGGCGTTACTGCTTAAAAAG---CAACCACAGTGTGTATTATTGGTGACTGGGGACTGACTGCATTATGAACC
TTTTGTTAGGTTTGTAGTAACAATTGAAAGCAAAGCAGACCCTCTACTTCCTGTGTAAGTAACCACAAAAATATCCTAC-
AGTATTACTTTATCTAAGGGATTACCTAAACATTTTTGTCCACTCATAGTCTAAT---GACTTGGTTTTTCTGTTACTGC
AGAACTACCGGAGCTGCTTACCAGTCTTGGGATAGGTGGTTTGAAGGTCCGCAGGATCTGCGTAGATGCAAATGCTGGTT
TTTGTGACAAAATGCCAAGA---------------ACGCAAGCAGCAGCCAGGACCGATTCATTTCCCATAGAGTTTCTT
CACAATCTCTGTTGAAGGAGTGGTATGAGAAGGGTACTGTGGAACACGGAGGCAGCACTGAGGACTGACTTAAGACTTTG
TTCTTCAATAAGTTCTTTCTGTCTATTGCATTCCTGTGCATTACATTATCTCTGGTGTTGGTGAAGTATGAGATCTTAGC
TCAAGAATGTCGTCCTAGTCTGAGAAATTATATGAACTCTCTTGTATTTCCACTTAGTTATCATGTTGTTGGATATTCTG
AAATCAACGTTGAACAATGAAAATTGACGCTTATTTCTTTTACTTTTGAACTGTGACAAAAAAT------CATGGATGTA
TTTTTGTTGCTGTGAGTGGAACTTTTGCTATTTTGTGAG--------TATGATTACAACATGAAGAATATGCAACCTACC
ATTTGAC------------------------------TTGACACTGGAGCCTGCCCAGGCTTTGAGTAAAAAGCCCAAAC
CTAACTCGGCCCAGCCAAATGCTGGTAAGCAAC-CACAAGATAGGCCACAAGTGAGGAGGTGATCTTATCCGAAGCCATG
GCAGTGGCCGCTCGTGGCAGTGGCGCACACACTCACCACGTTCACCGCCAGAAAGAACCCGAGCAATTACCAGAGTACAG
AGGATGGCCATGGC------GCCATCGCCCGCAAGCGCTTCCTCCTCCACCACCTCCCCTCTCCTGCCCTCCTCCCCATC
CATCTCTGCCTTCCTTGCCTCACACCCGGCCCTCACCCTCCTCCACACGCAATGCGCCACCATGGCTCACCTCCGCCAGC
TCCACGCCGCGCTCGTCAAGTCTGGCCTCGCCAAAGACCCCATCGCCGCCAGCCGCGCCGTCGCCTTCTGCGCCGGCGAA
GGACGCGACGCTGCCTACGCCGCGCGCATCGTCAGGCACCACCCGAGGCCCAACTCCTTCATGTGGAACACCGTCATAAG
>SNPs
-----------------------------S------------------SSS-------------------S---------
------------------------------------------------------S--------S-S-S------------
---------------------------------------------S-----------------------------S---S
-----------------S-S-----------------------------------------------------S------
---------------------------------------S-----S----S-------------S---------------
---------S-----------------------------S--------------------------S-------------
--------------------------------------------------------------S-----------------
---------------------------------------------S--S----------------------------S--
-------------------S----------------S-----------------------------S-------------
--------S-S--S--------------S------------------S--S-----------------------------
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----------------------------------------------------------------------S---------
S------------------------------S------------------------------------------------
--------S-----------------------------------------------------------------------
---------------------------------------------------------------------S----------
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------------------------------------------------------------------------S-------
--------SSSSSS-----S---------S------------------S-------------------------------
-----------------------------------------S--------------------------------------
------------------------------------------------------------------S------------S
-------------------S----------------------S------------------------SS-SSSS----SS
-------------------------------------------------------------S------------------
---------------------------------------SSS--------------------------------------
--------------S-S---------------------------------------------------------------
----------------S---SSSS---------------------------S-------S----------S---------
----------------------S---------------------------------------------------------
--------------------------S-----------S-----------------------------------------
--S--------------S---------S---------------------------------------S------------
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------------------------------S-------------------------------------------------
---------S------------------------------S---S-----------S----------------------S
-----------S--S-SS-S-------------------S----S---S-----S-------------------------
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------------S--------------S----------------------------------------------------
------------S----------------------------------------------------------S--------
----------------------S---------------------------------------S-----------------
----S--S------------------------------------S----------SS-----SS----------------
-------------------------------S-----------------S------------------------------
----------------------------------------------S---------------------------------
--------S-----------------S----------------------------------------S----S-------
-------------------------------S--------------------------S-SSS-SSSSSSS-SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------
--------------S---------------------------------------------------------S-------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
---------S---------------------SSSSSSS-SSS-----------S--------------------------
------------------------------------------------------------S-------------------
-----------------S--------------------S------------------------S----------------
--S--------------------------------------------------------------------------S--
---------------------------------------------------------------------S----------
-----------------S-----------S--------------------------------------------------
---------S----------------------------------------------------------------------
-------------------------------------------------------S----S-S-----------------
---SS-----------------------------------------S---------------------------------
---------------------------------------------------------------------------S--SS
---S-S----------SS---------S------------S--------------SSS-----S----------------
--------S-----------------------S-----------------------------------------------
--------------S---------------------S-------------------------------------------
--------------------S-----------------------------------------------------------
-------------------------S-------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S--------------SSSSSSSS----------------S---S---------S--
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-----------------S---SSSSS-----------S-
------S------S------------------------------------------------------------------
---------------------------------------S-----S----------------------------------
--------------SSSSSS---------------------S----------------S------S--S-----------
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>forward_771
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-------------------------------ATTGATCCACCGCTCCACTG-----------------------------
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>reverse_2177
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----------------TAGTCGGAATGCACATGGGG--------------------------------------------
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>forward_1827
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-----------------------------------------------CTCACCATGCACCACGAAAC-------------
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>reverse_4195
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----------------------------------TCAGCATCAGCATCAGACCA--------------------------
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>forward_3805
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-------------------------GCCATGGCATTGCTAGATGG-----------------------------------
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>reverse_5369
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--------TGGAGCTGCTTACCAGTCTTG---------------------------------------------------
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>forward_4068
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------------------------------------------------GGCGGGGAATTTTCTTACCG------------
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>reverse_5952
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-------------------------------TTGACTTTGCCACTGGAGCC-----------------------------
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