>input_sequence_22886
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-------------------ATGCTATCGTCTGCGATGGATTACCTGAGATCTTGCTGGGGTCCGACGTCGTCGCCGGACG
GGCGCCCTCGCAAGGGGGTGGATGCGGCCGGCCGGCAGGACGGGCTCCTGTGGTACAAGGACGCAGGGCAGCTCGTCGCC
GGCGAGTTCTCGATGGCCGTGGTCCAGGCTAATAACCTGCTGGAGGACCATAGTCAGGTGGAATCCGGGTCGCTGAGCAC
AACGGATCCCAACCTGCAGGGCAGCTTCGTCGGCGTCTATGATGGCCATGGTGGACCGGAGACGGCGCGCTACATCAATG
ACCACATGTTCAACCATCTGAAGGGTAATACCTCAATTGTTGCTGCGGCTCTCCTGATGTAGAACTTAAA----------
---------------------CTAGAAAGGATTTTACATCAAATGTCAGTCTAGCTATGCACTGCGATCCATAGTTGTAT
TGTTTCCCATTGCTAGACCTGCAAGTGTCTGTGATTGATGCTGATTGTTGTCAGCCATTTTTCTTGCCATGGATGTAGAT
ATTTATTGGATGCCTGCATTGCAAGGGATATAGTTCTACTTGTAGTAATACAGAAAACAAACAAGTGCAATTTAAATGAT
GTTCTCTTCGGAGCAGTTGCCTAGTTTATACTATATTCGATCCTTGGTTGATTTATTTTACT-------TTCAAGTATAA
TGGAAGCACATTTATTGTTGACTGTAGAGTGAATAAATGATAGTGTCGTTTACT-ACCTTCACGTCATATTATGATATGT
TTGAACTACATGTCAATCTCCATTAGTTCCCTTGCATGATGAACTTCCTTTTTCAGGATATGCATCTGAGCAGAAGTGCA
TGTCAGTGGAAGTAATTCGGAAGGCTTTCCGAGCGACCGAGGAGGGATTTCTCTCTCTAGTCAGTAATCAATGGTCGGTG
AGGCCGCAATTAGCGGCGGTAGGCTCTTGCTGTCTAGTTGGTGTGATTTGTGCTGGAACTCTCTATGTTGCAAATGTTGG
GGACTCTCGTGCTATTCTGGGGAGACTTGTCAAGGGAACTGGAGAGGTTGTGGCTATGCAGCTCTCAGCAGAACATAATG
CATCCTTCGAGGAGGTTAGGCGAGAGATGCAGGCAATGCATCCTGATGATCCCCACATTGTGATCCTGAAGCACAATGTT
TGGCGTGTGAAGGGTATTATTCAGGTAAATGCTTGGAGTTCAGAAATTGCAACTGGCATGTGATCCATAGCTTCCTTTAT
ACAGTCTTCGGACATTAGGCTAAACTTTTCATTATTACCATAACTGCGTTTAAATGCTGCGTCATGGTGCTTCTATTAGA
ATTATTGCTGCATGTTTTTACATTAGGCAAATTCTCAGTTATCAGCTATATTTAGGTGTTCTTGTTGGCTATTTTTTTAC
CCGTGTATACAATCTGCAATAATGCAACAGTCCGAGTCTTGTAATTAGGTAC----------------------------
--------------------------------------------------------------AGTAGTAGCCAAGACAAA
TACCATATTCAGCTGTTGAATGCATTTCCCTTGATGTCGATCCCGCAAATTAATTATTATGTATGCCTGCGTTTCTTAAA
ACAGATATGAGGTGTGCTTATCATGTA--------CAATATCGTCATGTGCATTTCCTAGATGAATCATTTTAATCTGCT
GTTGTCTCTTGCAT--CGTTACTGCTTAGTCCCTTCCCAAATGCCATGCAATTGCTTCTGCCGTGTATCTCACATGGTAG
GATAATGTGTTGCAGATAACAAGGTCCATTGGAGATGTGTATCTGAAGAGACCAGAATTCAACAGAGAACCTTTGCATAG
CAAGTTTCGGCTTCCAGAAACTTTCCAGAGACCGCTTCTTAGTTCTGAGCCAGCAATTACTGTACACCAAATACAGTTAA
CTGATCAGTTCATCATTTTTGCATCTGATGGGCTCTGGGAGCATCTTAGTAATCAGAAAGCTGTTGAGCTAGTCCACAGT
AGTCCTCGTAATGTATGTGTTCTTATCTTATGTTTAGTTTGTGTTACTGGGTTCTTTGAAAGCTAAGTGCTAGTTCATGC
ATTCTTTTTCCGAACCACAAAGTACGTATTTTTGCTTCTGTAGTAATTTTATCGTTCTTTGGTTGATGTTTCTGTTGAGG
TAAGTGGCTATATTTTCTTTCTTATAAGGAATTA-GGGAATACCAGATATGAACATCTTTAGAACTCTTTCTAAGTTCTG
TTAACATGTAATAGTTCTGCAAGAACATAGTATAGAC--ATTATCATGCAAGGGTATATTAGATTTTGTTCGCCTGCCAC
GATGGTTGCAACTGACTTAAATGGCACCAAGTTATCGATTTTGTAGCAGTTCCGCAGTTGTTGCTGTTTTAGGTATTTAA
ATTTGTCTGCATCAAAATGTTGTTTGAGATAACAACAATGGTTTAGTCCCTAGAATTTTGTGTTCCTCTGCTGGTCCTGG
ATTAGGTCATGTCTGGCTAATGTGGTATAGGTTATATTGTTGATTATCTATGTCTCTCTTTTCATGTCACACTATTGGAA
TCCCTAGTCGCTGAATTGAAGGTTACTTGCTTAAACTTCAGTCTGCAAATGCCTGGTTGGTTGCTTATTGAGGAGATATT
TTGTACTCCCTCCGTTCCTTTATAGTAGCAGTTATCATCTTCAGAGTTCAGACCTCCTTTTCTTTTCCA-----------
----------------------------------------------------------------------------AGGG
AACCATTTTTAGATCTCTTCAACATCTGCATTCTACA-TGAAGCATTGTGAATGAGCTACTTTACAACTGATTCGGTTAT
ATTAATCACACCTT-CCTGAACTATGGCGATTGGCACCTCACCAACTAACCAATGTAGACATGCTACTGAATCTCACTTC
ACATTTCAGTTTGCAAACAAACCATGTAGCAGAACCCAGCTTCATTATGTCTAAAC-ATCTTGTTCTCATATTCTACTAG
AGTCTTGTGTTCCTTAATTCATTTCATAGAACAACATTGTTTTCTTATTTTGTTATTAATGTTATCGTAACTTTATATGT
TTCAGGGGATTGCTCGAAAGCTAGTGAAGGCTGCAATGCAGGAAGCAGCAAAGAAGAGGGAGATGCGGTATTCAGATCTC
AAGAAAATTGACCGTGGAGTGAGGCGCCACTTTCATGATGATATAACGGTTGTCGTGGTATTTTTTGATTCGAATGCCAT
AGCCACTGACGCCTGGAACCGGCCCACAGTTTCTCTGCGAGGTGGTGGCGTTGCCCTCCCTGCAAATTCCCTTGCTCCAT
TCTCAGGTTCCTAG------------------------------------------------------------------
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-----------------------------------------------------------------
>chr1B_1_TraesCS1B01G218900
GTGGTGACACGTCCAATGCCCAGGGCCCAACACTGCATGTACATATGCATATATAACTCAAAA-----------------
-----TACGGCAAAATCACTTTTT--------------------------TACGTACCTGCGTTCGTAGAGGTGATCGTC
AGTGTGTACACGTGAACATTTGATTTGTATCATGCTTGTTTTTATCGGATGTCCCCGAAGGGACATCATGCTTCTTTTTA
TAGTTTATAAACAAAAATCCTTTTTCTTCGTGTGTAA-GATAAGAAAGGCAGCCAGAGAAAACAGGGGAGAGATTAATGG
AAGCATTCCACGAAATAGTCACCACCCCGGAATGAAATTAGGTCCTATCGCCTTTGCCATTGCCTTGCTGGCCCCGACCC
CCCCTCGCTCTCTCCTTGGGTTGCCTTGTTCGTCTTCTCTCTTGCTTGCTAGTCCTCTCTCTCCCTCTCT--TTGCTGTG
GAGCGGAGAAGATAGAGAGATTCCCTGATCTGCTCGTCGTTCGAGCCTG-CCTGCCTGCCTGCAAAATTTGGCAGCCGCG
AGAAGGGAGACCGAAAAGGAGAGCGGAAAAGCGCATCTTATTTTAGTCTCTCCGCCTCAGCTTCGCGGTTGCTTCGTCTG
GATCCCGTAGAGGAGCCCACCC-GTTCCACCAAAACCCAATCTTCCGCTTGCTCGAGATCGATTGGTTTCCAGATCCAAG
CCCGCCCCTCCCTCGTCGCGAGATCGCAGGAAATCTGGGTGCGCGGCTCTGCAGGAAGCTAGCCATCCAAGAAAAAGGTG
AGTTGTTCTTTTCTTGTTTGGTCCCTCGTCTTCCAATGCTAGTAGGGTGTGGTCGTTCTTGGCGATCTCTCCCCCTTCGA
TCGCGCAGCGTCTGCCGTGGATTGATCGGGCTCTTGATCTTGGTGTTTGTG------TTGGTTGGTTTCGATGGCAGATT
TGGCGAGGCGAAGGGAAGGGGAAAGGATATCGGGAGAGAAGGCGAATAGACATGGCTTTTGTGAGGCAGCGGGCGATGGG
GAGGTGGCGGAGATGAGGGATGCTATCGTCTGCGATGGATTACCTGAGATCTTGCTGGGGTCCGACGTCGTCGCCGGACG
GGCGCCCTCGCAAGGGGGTGGATGCGGCCGGCCGGCAGGACGGGCTCCTGTGGTACAAGGACGCAGGGCAGCTCGTCGCC
GGCGAGTTCTCGATGGCCGTGGTCCAGGCTAATAACCTGCTGGAGGACCATAGTCAGGTGGAATCCGGGTCGCTGAGCAC
AACGGATCCCAACCTGCAGGGCAGCTTCGTCGGCGTCTATGATGGCCATGGTGGACCGGAGACGGCGCGCTACATCAATG
ACCACATGTTCAACCATCTGAAGGGTAATACCTCAATTGTTGCTGCGGCTCTCCTGATGTAGAACTTAAA----------
---------------------CTAGAAAGGATTTTACATCAAATGTCAGTCTAGCTATGCACTGCGATCCATAGTTGTAT
TGTTTCCCATTGCTAGACCTGCAAGTGTCTGTGATTGATGCTGATTGTTGTCAGCCATTTTTCTTGCCATGGATGTAGAT
ATTTATTGGATGCCTGCATTGCAAGGGATATAGTTCTACTTGTAGTAATACAGAAAACAAACAAGTGCAATTTAAATGAT
GTTCTCTTCGGAGCAGTTGCCTAGTTTATACTATATTCGATCCTTGGTTGATTTATTTTACT-------TTCAAGTATAA
TGGAAGCACATTTATTGTTGACTGTAGAGTGAATAAATGATAGTGTCGTTTACT-ACCTTCACGTCATATTATGATATGT
TTGAACTACATGTCAATCTCCATTAGTTCCCTTGCATGATGAACTTCCTTTTTCAGGATATGCATCTGAGCAGAAGTGCA
TGTCAGTGGAAGTAATTCGGAAGGCTTTCCGAGCGACCGAGGAGGGATTTCTCTCTCTAGTCAGTAATCAATGGTCGGTG
AGGCCGCAATTAGCGGCGGTAGGCTCTTGCTGTCTAGTTGGTGTGATTTGTGCTGGAACTCTCTATGTTGCAAATGTTGG
GGACTCTCGTGCTATTCTGGGGAGACTTGTCAAGGGAACTGGAGAGGTTGTGGCTATGCAGCTCTCAGCAGAACATAATG
CATCCTTCGAGGAGGTTAGGCGAGAGATGCAGGCAATGCATCCTGATGATCCCCACATTGTGATCCTGAAGCACAATGTT
TGGCGTGTGAAGGGTATTATTCAGGTAAATGCTTGGAGTTCAGAAATTGCAACTGGCATGTGATCCATAGCTTCCTTTAT
ACAGTCTTCGGACATTAGGCTAAACTTTTCATTATTACCATAACTGCGTTTAAATGCTGCGTCATGGTGCTTCTATTAGA
ATTATTGCTGCATGTTTTTACATTAGGCAAATTCTCAGTTATCAGCTATATTTAGGTGTTCTTGTTGGCTATTTTTTTAC
CCGTGTATACAATCTGCAATAATGCAACAGTCCGAGTCTTGTAATTAGGTAC----------------------------
--------------------------------------------------------------AGTAGTAGCCAAGACAAA
TACCATATTCAGCTGTTGAATGCATTTCCCTTGATGTCGATCCCGCAAATTAATTATTATGTATGCCTGCGTTTCTTAAA
ACAGATATGAGGTGTGCTTATCATGTA--------CAATATCGTCATGTGCATTTCCTAGATGAATCATTTTAATCTGCT
GTTGTCTCTTGCAT--CGTTACTGCTTAGTCCCTTCCCAAATGCCATGCAATTGCTTCTGCCGTGTATCTCACATGGTAG
GATAATGTGTTGCAGATAACAAGGTCCATTGGAGATGTGTATCTGAAGAGACCAGAATTCAACAGAGAACCTTTGCATAG
CAAGTTTCGGCTTCCAGAAACTTTCCAGAGACCGCTTCTTAGTTCTGAGCCAGCAATTACTGTACACCAAATACAGTTAA
CTGATCAGTTCATCATTTTTGCATCTGATGGGCTCTGGGAGCATCTTAGTAATCAGAAAGCTGTTGAGCTAGTCCACAGT
AGTCCTCGTAATGTATGTGTTCTTATCTTATGTTTAGTTTGTGTTACTGGGTTCTTTGAAAGCTAAGTGCTAGTTCATGC
ATTCTTTTTCCGAACCACAAAGTACGTATTTTTGCTTCTGTAGTAATTTTATCGTTCTTTGGTTGATGTTTCTGTTGAGG
TAAGTGGCTATATTTTCTTTCTTATAAGGAATTA-GGGAATACCAGATATGAACATCTTTAGAACTCTTTCTAAGTTCTG
TTAACATGTAATAGTTCTGCAAGAACATAGTATAGAC--ATTATCATGCAAGGGTATATTAGATTTTGTTCGCCTGCCAC
GATGGTTGCAACTGACTTAAATGGCACCAAGTTATCGATTTTGTAGCAGTTCCGCAGTTGTTGCTGTTTTAGGTATTTAA
ATTTGTCTGCATCAAAATGTTGTTTGAGATAACAACAATGGTTTAGTCCCTAGAATTTTGTGTTCCTCTGCTGGTCCTGG
ATTAGGTCATGTCTGGCTAATGTGGTATAGGTTATATTGTTGATTATCTATGTCTCTCTTTTCATGTCACACTATTGGAA
TCCCTAGTCGCTGAATTGAAGGTTACTTGCTTAAACTTCAGTCTGCAAATGCCTGGTTGGTTGCTTATTGAGGAGATATT
TTGTACTCCCTCCGTTCCTTTATAGTAGCAGTTATCATCTTCAGAGTTCAGACCTCCTTTTCTTTTCCA-----------
----------------------------------------------------------------------------AGGG
AACCATTTTTAGATCTCTTCAACATCTGCATTCTACA-TGAAGCATTGTGAATGAGCTACTTTACAACTGATTCGGTTAT
ATTAATCACACCTT-CCTGAACTATGGCGATTGGCACCTCACCAACTAACCAATGTAGACATGCTACTGAATCTCACTTC
ACATTTCAGTTTGCAAACAAACCATGTAGCAGAACCCAGCTTCATTATGTCTAAAC-ATCTTGTTCTCATATTCTACTAG
AGTCTTGTGTTCCTTAATTCATTTCATAGAACAACATTGTTTTCTTATTTTGTTATTAATGTTATCGTAACTTTATATGT
TTCAGGGGATTGCTCGAAAGCTAGTGAAGGCTGCAATGCAGGAAGCAGCAAAGAAGAGGGAGATGCGGTATTCAGATCTC
AAGAAAATTGACCGTGGAGTGAGGCGCCACTTTCATGATGATATAACGGTTGTCGTGGTATTTTTTGATTCGAATGCCAT
AGCCACTGACGCCTGGAACCGGCCCACAGTTTCTCTGCGAGGTGGTGGCGTTGCCCTCCCTGCAAATTCCCTTGCTCCAT
TCTCAGGTTCCTAGCCCTTCCACTGGAGTTAAGAAGACACGAAGACCAGAAAAGGGAAGGAAAAGAAGAAGACAAGAAGA
GCAGCAGCCACGGTCAAGTGTAGCGCGTTTCCTGTGCGTTCTCGCAAG--AAAAAAAAA-CTTTTAGATTCAACCTGGTT
ACTAGTGTACTGATAGGGGCAAGGTATAAGATTAGATTATTCTTAGTGTACATTCTCCGGATCGTCTTGTGATAATAGTT
CATCTCATCACCATTTCATTTTGTTTAGCCCCTCACAAAGTGCTGCATCTATAGGCTGGCTAATCTTCGGCATGTAGCAG
GTTGCTTTCTTTATGCCTTAATCTGCTGAGCTCTGATCAACACGATCTACAACGTTACTCTGTTGACATGTCGATGCCAC
ATGTGAACTTGCACATA--TTGAACAGCTCTCGTCACAGGGAACCTGATGAAGAAGCCATTTGTGATGGCAATGCCTTGT
GGAGTTCGCATCGAAGCTGAGCCCCTCATTTTAATTTCTTTATTACGTGCAATTTGAAAGAAACTTCCAAAGTTTTAATC
AAGGTAGAAAGCGAGCATGATAAAACTAAGATTTTGTAGCATTGGTTTTCTGTTGCCAAGAACAGCCAGATCTGGTGCCA
TCCTTCCGTCCCATAATGTAAGACATTTCTGACACTACACTCGAGTCAAAAAAGGCATACATTATGGGGCGGAGGGATTA
GAAAGCAGATGAACCATATACGCAACATCCTCTCAGTACGACGAACTTGTATAATTTATGGCAATGAAACATCACAGCAT
ATTACTCACTCTGTTATCTACTACTCCAAAACATGAACACAG--AGAGTTTCTACCTAGCCCAACAGGTGCACCTCTGCC
CTTCGAGGGCTTGCTCCTTACCGGAGGCCAGAGAAGCAAAAGTGTTTGCCACCTTCAGAATGATGAGCTCTCTCACCATC
----GACTTGCCTTCACTGTGAGTTCAGGGACCGAGCAACTTCTTCCACCAGGCGTACCCTAACA
>chr1D_1
GTGATGACACGTCCAGTGCCCAGGGCCCAACACTGCATGTACATATGCATATATAACTCAAAACACAGTATACACAACAC
ATGATTACGGCAAAATCATTTTTTGAACAAGTGCCCACATGAATAGAGTATAGGTACCTGCGTTTGTAGAGGTGATCGTC
AGTGTGTACGTGTGAACGTTTGATTTGT------------------------------------ATCATGCTTCTTTTTA
TAGTTTATAAACAAAAAGCCTTTTTCTTCGTGTGTAT-GATAAGAAAGGCAGTCAGAGAAAACAGGGGAGAGATTAATGG
AAGCATTCCACGAAATAGTCACCACCCCGGAATGAAATTAGGTCCTATCGCCTTTGCCATTGCCTTGCTGGCCCCGACCC
CCCCTCGCTCTCTCCTTGGGTTGCCTTGTTCGTCTTCTCTCTTGCTTGCTAGTCCTCTCTCTCTCTCTCTCTTTGCTGTG
GAGCGGAGAAGATAGAGAGATTCCCTGATCTGCTCGTCGATCGGGCCTG-CCTGCCTGCCTGCAAAATTTGGCA-CCGCG
AGAAGGGAGACCGAAAAGGAGAGCGGAAAAGCGCATCTTATTTTAGTCTCTCCGCCTCAGCTTCGCGGTTGCTTCGTCTG
GATCCCGTAGAGGAGCCCACCC-GTTCCACCAAAACCCAATCTTCCGCTTGCTCGAGATCGATTGGTTTCCAGATCCAAG
CCCGCCCCTCCCTCGTCGCGAGATCGCAGGAAATCTGGGCGCGCGGCTCGGCAGGAAGCTATCCATCCAAGAAAAAGGTG
AGTTGTTCTTTTCTTGTTTGGTCCCTCGTCTTC-AATGCGTGTAGAGTGTGGATGTTCTTGGCGATCTCTCCCCCTTCGA
TCGCGCAGCGTCTGCCGTGGATTGATCGGGCTCTTGATCTTGGTGTTTGTG------TTGGTTGGCTTCGATGGCAGATT
TGGCGAGGCGAAGGAAAGGGGAGAGGATATCGGGAGAGAAGGCGAATAGACATGGCTTTTGTGAGGCAGCGGGCGATGGG
GAGGTGGCGGAGATGAGGGATGCTATTGTCTACGATGGATTACCTGAGATCTTGCTGGGGTCCGACGTCGTCGCCGGACG
GGCGCCCTCGCAAGGGGGTGGATGCGGCCGGCCGGCAGGACGGGCTCCTGTGGTACAAGGACGCAGGGCAGCTCGTCGCC
GGCGAGTTCTCGATGGCCGTGGTCCAGGCCAATAACCTGCTGGAGGACCACAGTCAGGTGGAATCCGGGTCGCTGAGCAC
CACGGATCCCGACCTGCAGGGCACCTTCGTCGGCGTCTATGATGGCCATGGTGGACCGGAGACGGCACGCTACATCAATG
ACCACATGTTCAACCATCTGAAGGGTAATACCTCAACCGTTGCTGCGGCTCTCCTGTTGTAGAACTTAAACTAGAAAGGA
TTTTCACCCGCAAAAAAAAACCTAGAAAGGATTTTACATCAAATGTCAGTCCAGCTATGCTATACGATCCATAGGTGTAT
CGTTTCCCATTGCTAGACCTGCAAGTGTCTGCAATTGATGCTGATTGTTCTCAGCCATTTTT----CCATGGAAGTAGAT
ATTTATTGGATGCCTGCATTGCATGGGATATGGTTCTACTTGTAGTAATACAGAGAACAAACAAGCGCAATTTAAATGCT
GTTTTGTTCAGAGCAATCACCTAGTTTATACTATATTCGATCCTTGGTTGATTTATTTTACTCCAAAAGTCCAAATATAA
TGGAAGCGCATTTATTGTTGACTGTAGAGTGAATAAATGATAGTGTCGTTTACTCACCTTCGCGTCATATTATGATATGT
TTGAACTACATGGCAATCTCCATTAGTTCCCTCACATGATGAACTTCCTTTTTCAGGATATGCATCTGAGCAGAAATGCA
TGTCAGTGGAAGTAATTCGGAAGGCTTTCCGAGCGACCGAGGAGGGATTTCTCTCTCTAGTCAGTAATCAATGGTCGGTG
AGGCCGCAATTAGCAGCGGTAGGCTCTTGCTGTCTAGTTGGTGTGATTTGTGCTGGAACTCTCTATGTTGCAAATGTTGG
GGACTCCCGTGCTATTCTGGGGAGACTTGTCAAGGGAACTGGAGAGGTTGTGGCTATGCAACTCTCAGCAGAACATAATG
CATCCTTCGAGGAGGTTAGGCGAGAGATGCAGGCAATGCATCCTGATGATCCCCACATTGTGATCCTGAAGCACAATGTT
TGGCGTGTGAAGGGTATTATTCAGGTAAATGTCCGGAGTTCAAAAATTGCAACTGGCATGTGATCCATAGCTTGCTTTAT
ACAGTCTTCAGACATTAGGCTTAACTTTTCATTATAACCATAACTGCGTTTAAATGCTGTGTCCCCATGCTTCTGTTAGA
ATTGTTGCTGCATGTTTTTACATTAGGCAAATTCTCAGTTATCAACTATACGTAGGTGTTCTTGTTGGCTATTTTTTTAC
CTGTGTATACAATCTGCAATAATGCAACGGTCTGAGTCTTGTAATTAG--------------------------------
---------------------------------------------------------------GTATTAGCCAAGACAAA
TACCATATTCAGCTGTTGAATGCATTTCCCTTGATGTCGATCCCGCAAATAAATTATTATGTACGCCTGTGTTTCTTAAA
ACAGATATGAGGTGTTC--------TA--------CAATATGGCCATGTGCATTTCCTAGATGAATCACTTTAATCTGCT
GTTGTCTCTTGCATAGCGTTACTGCTTAGTCCCTTCCCAAATGCCATGCAATTGCTTCTGCCGTGTATCTCACATGGTAG
GATAATGTGTTGCAGATAACAAGGTCCATTGGAGATGTGTATCTGAAGAGACCAGAATTCAACAGAGAACCTTTGCATAG
CAAGTTTCGGCTTCCAGAAACTTTCCGGAGACCGCTTCTTAGTTCTGAGCCAGCAATTACTGTACACCAAATACAGTTAA
CTGATCAGTTCATCATTTTTGCATCTGATGGACTCTGGGAGCATCTTAGTAACCAGAAAGCTGTTGAGCTAGTCCACAGT
AGTCCTCGTAATGTATGTGTTCTTATCTTATGTTTAGTTTCTGTTACTGGGTTCTTTGAAAGCTAAGTGCTAGTTCATGC
ATTCTTTTTCCGAACAACAAAGTACGTATTTCTGCTTTTGTAGTAATTTCATCGTTCTTTGGTTGATGTTTCTGTTGAGG
TAAGTGGACATATTTTCTTTCTTATAAGGAATTAAGGGAACACTAGATATGAACATCTTTAGAAGTCGTTCTAAGTTCTG
TTAACATGTAACAGTTCTGCAAGTACATAATATAGACATATTATCATGCTACGGTATATTAGATTTTGTTCGCCTGCCAC
GATGGTTGCAACCGACTTAAATGGCACCAAGTTATTGATTTTGTAGCACCTCCGCAGTTGTTGGTGTTTTAGGTACTTAA
ATTTGTCTGTAGCAAAATGTTGT------TAACAACAGTGGTTTAGTCCCTAGAATTTTGTGTTTCTCTGCCGGTCCTGG
ATTAGGTCATGTCTGCCTAATGTGGTATAGGTTATATTGTTGCTTATGTATGTC-CCCTTTTCATGTCACT---------
-------TCGCTGAATTGAAGGTTACATGCTTAAACTTCAGTCTGCAAATGCCTGGTTGGTCGCTTATTGAGGAGATATT
TTGTA----------------------GAAGTTATTATCTTCAAAGCTCCTCCATTCTCGATGATGAATCGATTTGATAG
ATCAGATATTGTTATTCCAAATATTGATCCGATTCAGTATCATCAGAATGACAAAAGCTGACTTGTTTTTTTT-CGAGGG
AACCATTTTTAGATCTCTTCAACATCTGCATTCTGCATTGAAGCATTGTGAATGAGCTACTTTACAACTGATTCATTTAT
ATTAATCACACCTTTCCTGAACTATGGGGATTGTCACCTCACCAACTAACCAATGTAGACATGTTACTGAATCTCACTTC
ACATTTCAGTTTGCAAACAGACCATGTAGTAGGACCCAGCTTCATTATATCTAAACAATCTTGTTCTCATATTCTACTAG
AGTCTTGTGTTCCTTCATTCATTTCGTAGAACATCATTGTTTTCTTATTTTG---TTAATGTTATCGTAACTTG-TATGT
TTCAGGGGATTGCTCGAAAGCTAGTGAAGGCTGCAATGCAGGAAGCAGCAAAGAAGAGGGAGATGCGGTATTCAGATCTC
AAGAAAATTGACCGTGGAGTGAGGCGCCACTTTCATGATGATATAACGGTCGTTGTGGTATTTTTCGATTCGAATGCCAT
AGCCATGGATGCCTGGAGCCGTCCCACAGTTTCTCTGCGAGGTGGCGGCGTTGCCCTCCCAGCAAATTCCCTTGCTCCAT
TCTCAGGTTCCTAGCC-TTTCACTGGAGTCAAGAAGACACGAAGGCCAGAAAAGAAATGG---AGAAGAAGACAAGA---
GCAGCAGCCACGGTCAAGTGTAGCGCGTTTCCTGTGCGTTCTCGCAAG--AAAAAAAAACCTTTTAGATTCAACCTGGTT
ACTAGTGTACTGATAGCGGCAAGGTATAAGATTAGATTATTCTTAGTGTACATTCTCCGGATCGTCTTGTGATAATAGTT
CATCTCATCACCATTTCATTTTGTTTAGCCCCTCACAAAGTGCTGCATCTCAAGGCTGGCTAATCGTGGACATGTAGCAG
GTTGCTTTCTTGATGCCTTAATCTGCTGAGCTCTGATCAACACGATGTACGACGTTATTCTGTTGACATGT------CAC
ATGTGAACTTGCACATATATTGAACGGTTCTTGTCACATCGTTTG-----------------------------------
--------------------------------------------------------------------------------
------GAAAGCAAGCATGATAAACCTAAGATTTTGCAGCATCGGTTTTCTGTTGCCAAGAACAGCCAAATCTGGTGCCA
ATCT------------------------------------------------------------------------ATTA
AAAAGCAGATGAACT------------------------GACGTACTTGTATAATTTATGGCAATGAAACATCACAGCAT
ATTACTCACTCTGTTATCTACTACTACAAAACATGAACACACATAGAGTTTCTCCCTAACCCAACAGGCACACCTCTGCC
CTTTGAGGGCTTGCTCCTTACTGGAGGCCAGAGAAGCAAAAGTATTTGCCACCTTCAGAATGATGAGCT-TCTCACCATC
TTATGACTTGCCTTCACTGTGAGTTCAGGGACCAAGCAACTTTTTCCACCAGGCGTACCCTAACA
>chr1A_177
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------ATCATGCTTCTTTTTA
TAGTTTATAAACAAAAAACTTTTTTCTTCGTGTGTAAAGATAAGAAAGGCAGCCAGACAAAACAGGGGAGAGATTAATGG
AAGCATTCCACGAAATAGTCACCACCCCGGAATGAAATTAGGTCCTATCGCCTTTGCCATTGCCTTGCTGGCCCCGAC-C
CCCCTCGCTCTCTCCTTGGGTTGCCTTGTTCGTCTTCTCTCTTGCTTGCTAGTCCTCTCTCC--CTCTCTCTTTGCTGTG
GAGCGGAGAAGATAGAGAGATTCCCTGATCTGCTCGTCGATCGAGCCTGCCCTGCCTGCCTGCAAAATTTGGCA-GCGCG
AGAAGGGAGACCGAAAAGGAGAGCGGAAAAGCGCATCTTATTTTAGTCTCCCCGCCTCAGCTTCGCGGTTGCTTCGTCTG
GATCCCGGAGAGGAGCCCACCTTGTTCCATCAAAACCCAATCTTCCGCTTGCTCGAGATCGATTGGTTTCCAGATCCAAG
CCCGCCCCTCCCTCGTTGCGAGATCGCAGGAAATCTGGGCGCGCGGCTCGGCAGGAAGCTAGCCATCCAAGAAAAAGGTG
AGTTGTTCTTTTCTTGTTTGGTCCCTCGTCTTGCAATGCGTTTAGGGTGTGGTCGTTCTTGGCGATCTCTCCCCCTTCGA
TCGCGCAGCGTCTGCCGTGGATTGATCGGGCTCTTGATCTTGGTGTTTGTGCTTGTGTTGGTTGGCTTCGATGGCAGATT
TGGCGAGGCGAAGGAAAGGGGAGAGGATATCGGGAGAGGAGGCGAATAGACATGGCTTTTGTGAGGCAGCGGGCGATGGG
GAGGTGGCGGAGATGAGGGATGCTAGCTTCTGCGATGGATTACCTGAGATCTTGCTGGGGTCCGACGTCGTCGCCGGACG
GGCGCCCTCGCAAGGGGGTGGATGCGGCCGGCCGGCAGGACGGGCTCCTGTGGTACAAGGACGCAGGGCAGCTCGTCGCC
GGCGAGTTCTCGATGGCCGTGGTCCAGGCCAATAACCTGCTGGAGGACCACAGTCAGGTAGAATCTGGGTCGCTGAGCAC
CACGGATCCCGACCTGCAGGGCACCTTCGTCGGCGTCTATGATGGCCATGGTGGACCGGAGACGGCACGCTACATCAATG
ACCACATGTTCAACCATCTGAAGGGTAATACCTCAACCGTTGCTGCGGCTCTCCTGTTGTAGAACTTAAACT--------
-----------------------AGAAAGGATTTTACATCAAATGTCAGTCTAGCTATGCTATACGATCCATAGTTGTAT
TGTTTCCCATTGCTAGACCTGCAAGTGTCTGTGATTGATGCTGATTGTTCTCAGCCATTTTTCTTCCCATGGAAGTAGAT
ATTTATTGGATGCCTGCATTGCATAGGATATAGTTCTGCTTGAAGTAAAACAGAGAACAAACAAGCGCAATTTAAATGAT
GTTTTGTTCAGAGCAGTTGCCTACTTTGTACTATATTCGATCCTTGGTTGATTTATTTTACT-------TCCAAGTATAA
TGGAAGCACATTTATTGTTGACTGTAGAGTGAATAAATGATAGTGTCGTTTACTCACCTTCACGTCATACTATGACATGT
TTGAACCACATGTCAATCTCCATTAGTTCCCTCACATGATGAACTTCCTTTTTCAGTATATGCATCTGAGCAGAAGTGCA
TGTCAGTGGAAGTAATTCGGAAGGCTTTCCGAGCGACCGAGGAGGGATTTCTCTCTCTGGTCAGTAATCAATGGTCGGTG
AGGCCGCAATTAGCGGCGGTAGGCTCTTGCTGTCTAGTTGGTGTGATTTGTGCTGGAACTCTCTATGTTGCAAATGTTGG
GGACTCCCGTGCTATTCTGGGGAGACTTGTCAAGGGAACTGGAGAGGTTGTGGCTATGCAGCTCTCAGCAGAACATAATG
CATCCTTTGAGGAGGTTAGGCGAGAGATGCAGGCAATGCATCCTGATGATCCCCACATTGTGATCCTGAAGCACAATGTT
TGGCGTGTGAAGGGTATTATTCAGGTAAATGTCCGGAGTTCAAAAATTGCAACTGGCATGTGATCCATAGCTTGCTTTAT
ACAGTCTTCAGACATTAGGCTTAACTTTTCATTATAGCCATAACTGCATTTAAATGCTGTGTCCCTATGCTTCTGTTAGA
ATTGTTGCTGCATGTTTTTACATTAGGCAAATTCTCAGTTATCAACTATACTTAGGTGTTCTTGTTAGATA-TTTTTTAC
CAGTGTATACAATCTGCAATAATGCAAGAGTCCGAGTCTTAAAATTAGGTACTCTCTCCGTTCCAAAATAGATGACTCAA
CTTTGTACTAACTTTATACTACAGTTAGTACAAAGTTGAGTCATCTATTTTGGAACGGAGGGAGTATTAGCCAAGGCAAA
TACCATATTCAGCTGTTGAATGCATTTCCCTTGATGTTGATCCCGCAAATAAATTATTATGTATGCCTGTGTTTCTTAAA
ACAGATATGAGGTGTGC--------TAACCATGTGCAATATGGTCATGTGCATTTCCTAGACGAATCAC-TTAATCTGCT
GTTGTCTCTTGCATAGCGTTACTGCTTAGTCCCTTCCCAAATGCCATGCAATTGCTTCTGCTGTGTATCTCACATGGTAG
GATAATGTGTTGCAGATAACAAGGTCCATTGGAGATGTGTATCTGAAGAGACCAGAATTCAACAGAGAACCTTTGCATAG
CAAGTTTCGGCTTCCAGAAACTTTCCGGAGACCGCTTCTTAGTTCTGAGCCAGCAATTACTGTACACCAAATACAGTTAA
CTGATCAGTTCATCATTTTTGCATCTGATGGACTCTGGGAGCATCTTAGTAACCAAAAAGCTGTTGAGCTAGTCCACAGT
AGTCCTCGTAATGTATGTGCTCTTATCTTATGTTTAGTTTGTGTTACTGGGTTCTTTGAAAGCTAAGTGCTAGTTCATGC
ATTCTTTTTCCAAACAACAAAGTACGTATTTCTGCTTTTGTAGTAATTTCATCGTTCTTTGGATGATGTTTCTGTTGAGG
TAAGTGGACATATTTTCTTTCTTATAAGGAATTAAGGGAACACTAGATATGAACATCTTTAGAACTCATTCTAAGTTTTG
ATAACATGTAACAGTTCTGTAAGTACATAGTATAGACATATTATCATGCTAGGGTATATTAGATTTTGTTCGCCTGCCAT
GATGGTTGCAACCGACTTAAATGGCACCAAGTTATCGATTTTGTAGCACTTCCGCAGTTGTTGGTGTTTTAGGTACTTAA
ATTTGTCTGTAGCAAAATGTTGTTTGAGATAACAACAGTGGTTTAGTCCCTAGAAGTTTGTGTTTCTCTGCCGGTCCTGG
ATTAGGTCATGTCTGCCTAATGTGGTATAGGTTATATTGTTGATTATGTATGTCCCCCTTTTCATGTCACT---------
-------TCGCTG-ATTGAAGGTTACATGCTTAAACTTCAGTCTGCAAATGCCTGGTTGTTCGCTTATTGAGGAGATATT
TTGTA----------------------GCAGTTATCATCTTCAGAGCTC-------------------------------
-------------------------------------------------------------CTTGTTTTTTTTCCGAGGG
AACCATTTTTAGATCTCTTAAACATCTGCATTCTTCATTGAAGCATTGTGAATGAGCTACTTTACAACTGATTCATTTAT
ATTAATCACACCTTTCCTGAACTATGGCGATTGTCACCTCACCAACTAACCAATGTAGACATGTTACTGAATCTCACTTC
ACATTTCAGTTTGCAAACAGACCATGTAGTAGGACCCAGCTTCATTATGTCTAAACAATCTTGTTCTCATATTCTACT--
AGTCTTGTGTTCCTTCATTCATTTCGTAGAACAGCATTGCTTTCTTATTTTG---TTAATGTTATCGTAACTTG-TATGT
TTCAGGGGATTGCTCGAAAGCTAGTGAAGGCTGCAATGCAGGAAGCAGCAAAGAAGAGGGAGATGCGGTATTCAGATCTC
AAGAAAATTGACCGTGGAGTGAGGCGCCACTTTCATGATGATATAACGGTCGTTGTGGTATTTTTCGATTCGAATGCCAT
AGCCATGGATGCCTGGAGCCGTCCCACAGTTTCTCTGAGAGGTGGCGGCGTTGCCCTCCCAGCAAATTCCCTTGCTCCAT
TCTCAGGTTCCTAGCC-TTTCACTGGAGTCAAGAAGACACGAAGGCCAGAAAAGAAATGG---TGAAGAAGACAAGAAGA
GCAGCAGCCACGGTCAAGTGTAGTGCGTTTCCTGTGCGTTCTCGCAACAAAAAAAAAGACCTTTTAGATTCAACCTGGTT
ACTAGTGTACTGATAGCGGCAAGGTATAAGATTAGATTATTCTTAGTGTACATTCTCCGGATCGTCTTGTGATAATAGTT
CATCTCATCACCATTTCATTTTGTTTAGCCCCTCACAAAGTGCTGCATCTCAAGGCTGGCTAATCTTGGACATGTAGCAG
GTTGCTTTCTTGATGCCTTAATCTGCTGAGCTCTGATCAACACGATCTACAACGTTATTCTGTTGACAAGT------CAC
ATGTGAACTTGCACATA--TTGAACGGTTCTTGTCACATCGTTCG-----------------------------------
--------------------------------------------------------------------------------
------GAAAGCAAGCATGATAAACCTAAGATCTTGCAGCATCGGTTTTCTGTTGCCAAGAATAGCCAAATCTGGTGCCA
ATCT------------------------------------------------------------------------ATTA
AAAAGCAGATGAACT------------------------GACGTACTCGTATAATTTATGGCAATGAAACATCACAGCAT
ATTACTCACTCTGTTATCTACTACTACAAAACATGAACACAC--AGAGTTTCTCCCTAACCCAACAGGCACACCTCTGCC
CTTCGAGGGCTTGCTCCTTACCGGAGGCCAGAGAAGCAAAAGTGTTTGCCACCTTCAGAATGATGAGCTCTCTCACCATC
TTATGA---GCCTTCACTGTGAGTTCAGGGACCGAGCAACTTCTTCCACCAGGCGTACCCTAACA
>SNPs
---S-----------S----------------------------------------------------------------
------------------S---------------------------------S-----------S---------------
---------SS------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
---------------------------------------S----------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S---------S------------------------------
---------------------------------------SS---------------------------------------
-----------------------------------------------------------------S--------------
--------------S-------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------S-----------------------------
S---------S------------S------------------------------------------S-------------
------------------------------------SS------------------S-----------------------
------------------------------------------------------------SS-S----------------
-------------------------------------------------S---------------S-------S------
-----------------------S------------------------------S----------S--------------
---S-S---S------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------SS----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------SSS--------S------------------------------S------
---------S-----------S-------------S-----------------------S---SSSS-------S-----
---S----------------------------------------S-----S-----------------------------
-S------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------S------------------S----------
-----------------SSSSSSSS----------------S--------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
-------------------------------S--------------------S---------------------------
--------------------------------------------------------------------------------
---------------S---------------S-----S-----------S------------------------------
-------SS-------------------------------S--S-----------------------S------------
-----------S-----------S-------------------------S------------------------------
------------S-----------------------------------S--------------S-----------S----
---------S-S-------------------------S--------------------------S------S--------
---------------S-------------------------------S------S-S-------------SSSSSSSSSS
SSSSSSS-------------------S----------------------------------S------------------
-----SSSSSSSSSSSSSSSSSSSSSS-------------------S--SSS-S-S--SSSSSS-SSSS-----------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------SS----
---------------------------------S-----------------------------S----------------
-------------------S---------S--S-----------------------------------------------
---------------S---------S-------S------------------SSS------------------SS-----
--------------------------------------------------------------------------------
--------------------------------------------------S--S-----------S--------------
-----SS--S-------S---S-----------------------S--------------S-------------------
----------------S--S---------S--------------S---------SS-S--SSS-----------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------SS---------------S-S----------
-----------S---------------------------------------------S-------------SSSSSS---
-------------------------S-S---S------SS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS------S-----------S-----------S-----S-------------------------S-----------
SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
S-------------SSSSSSSSSSSSSSSSSSSSSSSSS----S------------------------------------
-------------------------S---------------S-----------S----S---------SS----------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_840
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GTCCCTCGTCTTCCAATGCT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_2087
--------------------------------------------------------------------------------
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------TCGTGCTATTCTGGGGAGAC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>forward_1624
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----ATTGGATGCCTGCATTGCAA--------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_3585
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------CCTCTGCTGGTCCTGG
ATTAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>forward_2384
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TGCGTTTAAATGCTGCGTCA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_4100
--------------------------------------------------------------------------------
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-------------------AACCATGTAGCAGAACCCAGC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_3742
--------------------------------------------------------------------------------
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------------------------------------------CTGCAAATGCCTGGTTGGTT------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_5174
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-----------------------------------------------------GGCATACATTATGGGGCGGA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
