>input_sequence_22702
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-----------ATGAAAACCTACCACGGGGTTTCCCCAGGCGGCCG---CCGCCGCAGCGGTTCTCAAATCGGCGCGAGC
GAGGAGGCCGCCGAAATGGCCGGCGCTAGCCGCAGTCGCCGCCGCTCCCAGATCGCGGTGACCCGCCCCGGTCGCCGTAG
CCGCTCCCATATCGGGGCGAGCGAGGAGGACGAGGGGCTGGTCCGCCCCGGTCGCCGCCGCCGCTCCCAAGTCGGGGCGA
GCGAGGATCGCCGCCGCCGCCGCCGCCGCAC---CTCTCCGGAGGCGCCTGTCCCTCTGCCGGGTGACGGCGATACGCCG
CGGA---ACGGCGGCCGCTGTCCTCCGGCCCCGTGCGAGTCGCTGCCGTTGGATATGCTTTGGGAGATCCTTCTCCTTCT
GCCACCACAGCCGTCGTCCCGCCTGCTCGCATCCTTGGTCTCCAGGCGCTGGCGAGGCCTCGCCACCGACCCCAACTTCG
TCCGCCAGTTCCAAGCCCGCCGCAGGAGCTGGAAGCCGCCCCTACTCGGCTTCTTCGAGCGCCGACGGAAGATCGTGTTC
AACCAGGACATCCTGTACCCTCCCGACCGTGTCCCTGCTGAGCGCATCCACATCCCGTTCGGCATGGCCTCCCGCGGCTT
TGAAGTTTTGGGGTGCCGTGGCGGTCGCGTGCTCGCCTTACACCGGGTGTTCAGACAGCTTATTGTGTTCGCTCCCATCA
CCGGCGAGCAGCGGTACTTCGCTGTTCCTGCCGAATTCGGGCAACCGTCCATCCTCTACGGGGCGGTGCTCTGTGCTGCT
GGCGAGCAGGACCATGTGCACGGCCACTGTCATTGCAGCCCTTTCAAGGTTGTCTTGGTGTCTCACAAAAGAGATCATCA
ACCACAGGCTTGTGTTTTTTCCTCGGAGACTGACACATGGAGCAATATCATATCAACAAAGTATCCATGCGAGCTCCATG
GTGATAGCGTTCCCGCGACCCTTATTGGCGATGCACTCTATTGGCTGCTTTCGTGCAATGCCATATTTTGGTTTGATTTG
GATATGCAGAGCCTAGCTGTCATCATGGGGCCTCCTGGTATGAATGAATCTGGCAACTATAGGATCATCAAGCCAGAGGA
CGGCGCTGATGGCCTAGCCATAGCCATATTCCTCTTCCCGAACCTTCAGATCTGGCAGAGGGTGGTTAATTCTCAGGGTA
TTGCCACATGGTTTTTGCGGAAGACTGTTGAAATGCATAGCACTCTTGGGATCCCTCATCAGATTAGGAGAAAGGTGTGG
CAAGACAAAGTGCTGGGGTATGATGAAGATAACGATGTGATCATCCTCTATGTGGATGACAGTGCCTACATGCTTGAACT
TAAGCAAATGCAATCCAGGAAACTTAACGGAACCCGTTCTATGAAACAATGTCATCCTTTCACGAGTTTCTATCCGCCAG
GTAATTCCTCATCCTTAGTAT--TTATATCATAGAGTAACCCAATCTAGTTATGTTCTGTACATGATTGCTTGAATACAG
ATATTGTGATTCTGAATTTTTCACCTATAACTTGTATTGAGTAAGCAACTGTCGCTGATAAAACTTATCTAACACCTAAT
TTGATGTCAAATGAA--TAAGTCAGTTGGCAAGTGTGAAACCTCAAAGCTGGTTATAC-TTTTATCTGTTAATATCTGTT
CTGATCTTGTTATTTATCGTAATTCCATAAAAAAAAACTTCTGTTGAATCCATACTTTGTGAAATAACTGTGATTTTGTC
ATTTGTTCATGACCCCTTCTGCTGGTGCGTGTTACATTTGTAGCACATAGGAATAAATTGAATTTCTTGTCTCGGGATCC
TTATTATTTAAGACAGAATACTTGACATCTGCTGGTGCCCTTGGTTGGCCGTCTATACCGGCGCTTCTTCGATTCGGACA
CACTCCTGGAGCTGCGTCTCCTTCCAGCTCCTTGGGCTCGCTGGCGACCCTGCTGTCCGGTCCTGTTGGCCTGGATCTGT
GCTCCCCAGCAGATCCTGGCTCGTCTGGGTCTCCAGCCACCGTCACATCCCTCGCCGCTTCTCATTCCGCCCAGCCACCC
AACCTCGCCCACCTCCATGCCCCGTCCGTCCTTCCGCCTGCTCCTGAGCTCGCACGTCTAGCGGCGCCCGCTGCCTCCTT
TGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCCTTCCTGCGGTCGCGGTTCCGGCCTATGCCCGACTTCCTCTTCTCTGATTTGTGCTCTGACGGCTTGGGATTGCATC
CCTGCATCCTATGCTGGCAGCGGCGACCCGCGGGTGCCGTCCCCTTCTTGGAGGCACTGCCATGGCCTTCATCTGTGGCC
CTCTTCTAGCATCAGGGGAAACCCTTGGTCCGGTTATTTGGATCGGACGGCGACGCCATCTCGGTGTCGTTCTCCTTCGT
TAAGGCGCTGTCTTGTTTGCTCGCGGCGTCCTCGGTTCTGGATTTGGAGATGTTGGTCATCTAGTTGTTGGTTTGGGTTG
CTTCCAAGGGCGGTGAGTTTAGCTGTGCTTT-CTCTGTTTGGGCCGAGCATTCCTTGCATCTCTGCTCTGGGCACCATGT
TCACGCCTCTTGCGTCCGTG----------------------------CTCTAACTTCTATCAATGGAATGATATGCAAG
CTTTGCGTATTCGCGAAAATAAAAGAATACCTGACATCAATTTTCTGCTAGACTTTATTGTTTTGGCATAGTGTTGTTTG
CTTGACATGACAAGGGATGATCTTACATGAAAAAAGTTATAGGACATGTTTT--TCTTCTTGGTAGCTAAATTCTCCATC
CGAAGGTAGCTAAATATGCTACTTTTATGAATATTCTTTGCATTTTACAACATATGTGGCTTTTCAAAATCTATTGCTGG
TACTGTAAAGAGTGAGTTATAACACATATATAATAAAAATGAGTTATATGAGATATTTCTAATTGTCTCATTGTGGCCTT
TTGTTCTCCATTTGTCTCTTCATCATAACTGTTGCTAATTGTCTGACTTTTATGCTTCTAGACATAGCCATCTAA-----
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>chr5A_1_TraesCS5A01G406800
TCAAATCGCCCGTAAACGTTCGAATCATGATGTCCGGATGCAATTTGCCATTCAACATCGCCCGACATCGGTCCACGGAC
CA-------TGTCCGTTTCCTGCAAACCAAAAGCAAACTAGGGCACTTTGCGGGAGTCCAAACCGTCGCCATGTAGGACT
ATGGCACCCCCGGCCCACTCAAAGTGCACAACTAGAACATTTGTGCTAGTTGAATGCAAGTTTGAATTATTTTATTTGAC
AACTTATTTGGATTGTAATATTTAAATTAGAACTACCGTTGCATTTGAATATTTTCAACCTTCGCTGATTTGATATGCCA
CTATTTTGAGCCCACAGATATTTTTGAAAAAGAGACAAAAATTTTAGGAAACAACGTTGGATGACCTGCTCCCACATCAC
TGCTCGTGAACTGATCTGGATCAGTCTACAGATAAATACTGTAACCGTTTTGAGGGTCAACAATGAAGATCCGCGTCAAC
AGCGCAGACTCCCCTGGGCGGCTAGGCCCTTCGATGA-CCCGGTCCTACCAAAGTCGGTATGGCAAAAGCATCATGCCAT
TGCTTGGTGCTACATTTCGTTTAGTAGTAT-TTTTAACGCCGGCTCATTCAGTCTAGAGGAAACCAAAACGTAGAAATAA
GAAGTATACAAGAATTTGATAGGATGGCACTTGTCATTTTAAGGATTTGTCTT-GACTTGATCTTACGCAAAAAAGAGAG
CTTTGAGT---GGATGTGATGTATGGTTTTCTTCAAAAACACAGAAAATGAATAGTATTTTTAAGAAATTCC--------
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-------------------TGCTTTCTGGGTGTTGT--------GGGTCTTTGGCCCAGCAAGACAACGGCGCAGCTAGT
CTTCAGGTGGGGCCTCCAGAGAAGAACTTGGTAGCAGTGTCATC--CCCTTGGAACGGAAAAGAAAACCCTAACCCCTAC
CCACCCCCTTGGCGGCGCCCGATTGAACT-GCCGCCGTGAAAGCTCGCCGGAGTCGTCTATGACCGACTCCCAATAAAAA
CCACCACCAGAATGAAAACCTACCACGGGGTTTCCCCAGGCGGCCG---CCGCCGCAGCGGTTCTCAAATCGGCGCGAGC
GAGGAGGCCGCCGAAATGGCCGGCGCTAGCCGCAGTCGCCGCCGCTCCCAGATCGCGGTGACCCGCCCCGGTCGCCGTAG
CCGCTCCCATATCGGGGCGAGCGAGGAGGACGAGGGGCTGGTCCGCCCCGGTCGCCGCCGCCGCTCCCAAGTCGGGGCGA
GCGAGGATCGCCGCCGCCGCCGCCGCCGCAC---CTCTCCGGAGGCGCCTGTCCCTCTGCCGGGTGACGGCGATACGCCG
CGGA---ACGGCGGCCGCTGTCCTCCGGCCCCGTGCGAGTCGCTGCCGTTGGATATGCTTTGGGAGATCCTTCTCCTTCT
GCCACCACAGCCGTCGTCCCGCCTGCTCGCATCCTTGGTCTCCAGGCGCTGGCGAGGCCTCGCCACCGACCCCAACTTCG
TCCGCCAGTTCCAAGCCCGCCGCAGGAGCTGGAAGCCGCCCCTACTCGGCTTCTTCGAGCGCCGACGGAAGATCGTGTTC
AACCAGGACATCCTGTACCCTCCCGACCGTGTCCCTGCTGAGCGCATCCACATCCCGTTCGGCATGGCCTCCCGCGGCTT
TGAAGTTTTGGGGTGCCGTGGCGGTCGCGTGCTCGCCTTACACCGGGTGTTCAGACAGCTTATTGTGTTCGCTCCCATCA
CCGGCGAGCAGCGGTACTTCGCTGTTCCTGCCGAATTCGGGCAACCGTCCATCCTCTACGGGGCGGTGCTCTGTGCTGCT
GGCGAGCAGGACCATGTGCACGGCCACTGTCATTGCAGCCCTTTCAAGGTTGTCTTGGTGTCTCACAAAAGAGATCATCA
ACCACAGGCTTGTGTTTTTTCCTCGGAGACTGACACATGGAGCAATATCATATCAACAAAGTATCCATGCGAGCTCCATG
GTGATAGCGTTCCCGCGACCCTTATTGGCGATGCACTCTATTGGCTGCTTTCGTGCAATGCCATATTTTGGTTTGATTTG
GATATGCAGAGCCTAGCTGTCATCATGGGGCCTCCTGGTATGAATGAATCTGGCAACTATAGGATCATCAAGCCAGAGGA
CGGCGCTGATGGCCTAGCCATAGCCATATTCCTCTTCCCGAACCTTCAGATCTGGCAGAGGGTGGTTAATTCTCAGGGTA
TTGCCACATGGTTTTTGCGGAAGACTGTTGAAATGCATAGCACTCTTGGGATCCCTCATCAGATTAGGAGAAAGGTGTGG
CAAGACAAAGTGCTGGGGTATGATGAAGATAACGATGTGATCATCCTCTATGTGGATGACAGTGCCTACATGCTTGAACT
TAAGCAAATGCAATCCAGGAAACTTAACGGAACCCGTTCTATGAAACAATGTCATCCTTTCACGAGTTTCTATCCGCCAG
GTAATTCCTCATCCTTAGTAT--TTATATCATAGAGTAACCCAATCTAGTTATGTTCTGTACATGATTGCTTGAATACAG
ATATTGTGATTCTGAATTTTTCACCTATAACTTGTATTGAGTAAGCAACTGTCGCTGATAAAACTTATCTAACACCTAAT
TTGATGTCAAATGAA--TAAGTCAGTTGGCAAGTGTGAAACCTCAAAGCTGGTTATAC-TTTTATCTGTTAATATCTGTT
CTGATCTTGTTATTTATCGTAATTCCATAAAAAAAAACTTCTGTTGAATCCATACTTTGTGAAATAACTGTGATTTTGTC
ATTTGTTCATGACCCCTTCTGCTGGTGCGTGTTACATTTGTAGCACATAGGAATAAATTGAATTTCTTGTCTCGGGATCC
TTATTATTTAAGACAGAATACTTGACATCTGCTGGTGCCCTTGGTTGGCCGTCTATACCGGCGCTTCTTCGATTCGGACA
CACTCCTGGAGCTGCGTCTCCTTCCAGCTCCTTGGGCTCGCTGGCGACCCTGCTGTCCGGTCCTGTTGGCCTGGATCTGT
GCTCCCCAGCAGATCCTGGCTCGTCTGGGTCTCCAGCCACCGTCACATCCCTCGCCGCTTCTCATTCCGCCCAGCCACCC
AACCTCGCCCACCTCCATGCCCCGTCCGTCCTTCCGCCTGCTCCTGAGCTCGCACGTCTAGCGGCGCCCGCTGCCTCCTT
TGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCCTTCCTGCGGTCGCGGTTCCGGCCTATGCCCGACTTCCTCTTCTCTGATTTGTGCTCTGACGGCTTGGGATTGCATC
CCTGCATCCTATGCTGGCAGCGGCGACCCGCGGGTGCCGTCCCCTTCTTGGAGGCACTGCCATGGCCTTCATCTGTGGCC
CTCTTCTAGCATCAGGGGAAACCCTTGGTCCGGTTATTTGGATCGGACGGCGACGCCATCTCGGTGTCGTTCTCCTTCGT
TAAGGCGCTGTCTTGTTTGCTCGCGGCGTCCTCGGTTCTGGATTTGGAGATGTTGGTCATCTAGTTGTTGGTTTGGGTTG
CTTCCAAGGGCGGTGAGTTTAGCTGTGCTTT-CTCTGTTTGGGCCGAGCATTCCTTGCATCTCTGCTCTGGGCACCATGT
TCACGCCTCTTGCGTCCGTG----------------------------CTCTAACTTCTATCAATGGAATGATATGCAAG
CTTTGCGTATTCGCGAAAATAAAAGAATACCTGACATCAATTTTCTGCTAGACTTTATTGTTTTGGCATAGTGTTGTTTG
CTTGACATGACAAGGGATGATCTTACATGAAAAAAGTTATAGGACATGTTTT--TCTTCTTGGTAGCTAAATTCTCCATC
CGAAGGTAGCTAAATATGCTACTTTTATGAATATTCTTTGCATTTTACAACATATGTGGCTTTTCAAAATCTATTGCTGG
TACTGTAAAGAGTGAGTTATAACACATATATAATAAAAATGAGTTATATGAGATATTTCTAATTGTCTCATTGTGGCCTT
TTGTTCTCCATTTGTCTCTTCATCATAACTGTTGCTAATTGTCTGACTTTTATGCTTCTAGACATAGCCATCTAAGAAGC
ACTGATATG-GAACATGGAGAGTTGGAGACGCAGATATGGATGCAGAGTCGTAGGATATAGCATTTTCCAGGAACAGCCA
TGCGGGGATGCAGCGAGTATATAAATGAAAAAGTACAGCATGTGATGTAATGAGGGACAATAGTATGCATTTGTAAGATG
TAAGATCAAAGTAGTGCCCACTTGTTGTCTGCGGGCCTTTGTTTACCTGTTTGTATGTATTTGTAAGATGTAAGATCAAA
GTAGTGCCCATTTGTTGTCTGCGGGCCTTCGTTTACCTGTTTGTATGTGGCTGAGCTTAATGCAGCTGATGCTGC-----
--------ATGTAAGTAAATATTTCAGGAAAAGAAAACACAATGA-------AGTATGGACATAATTATATCTGTAAGAT
GTGGGATCAGGTCTTGATTCTACCATGTGGTGGGCAGCTAAAGCAGATCTAGATGTGTCATAAGTATTGCACATTCAAGT
CCCGTGCCAGCATCTTGAAGGAGAAATCAGATAAATGCAGAAGCAAGAAGAGTGACGCTATAAGAAAGTTGTCGGCAGTT
GCTTGATGATGGTGATGATGCTTATTTTGTGGGGGGCAATTCTGTGAGGTTGCGTTCCATATGCCGGCAGTTGGTAGGGT
TAGCGTGTTGGGCGTGTTTTCATGTTTGCTCTTGTGGTTTTGTGGGCTCATGATTTGGGAGTAGTCCGCTTGCTTCATGG
GGTTGTGGCTTGGTTGCATTCCGTCGTCAAGTTGTAACGGGGTTGTGGCTTGGTTGCATTCCGTCGTCAAGTTGTAACGG
TTTTTGTCTGGTTTTCTGCAATTAACTGGGCAACTCTCTTATTAATTAATGAATGAGGCAAAACTTTTGCCTTCTTTTCA
AGAAAAAAAGTCCTGTGCCATTGATCTTACATGGAGATTCGTTGAGTGTTTTCTTTTTTGTTTCCTTTTTCTTTTTGTGC
TAATTAAGTCATTTAGATGTGCAATAACTAGGACGTATCTAGATGTGTTTTAAACA
>chr5D_1
TCAAATCACCCGTAAACGTTCAGACCGTGCTGTCCGGACGTAATTTGCCATCCAGCGCCGTCCGACATCGGTCCATGGAC
CAGTCTGCTTGTTTGTTTCCCGCAAATCAAAAACAAACTAGGGGACTCTGCGGGGGTCCAAACCATAGCTATGTAGGACC
GTGGCACCGTCGTCCCACTCAAAGGGGACAACTAGAACATATGTGCTAGTTGAATGCAAGTTTGAACTATTTTA----AA
TACTTATTTGGATTGTAATAATTAAATTAGAACTACTATTGCATTTGAATATTTTCAATCTTTGATGATTTGATATGCTG
CTATTTTGAGCTCGCGAATATTTTTTG-AAAGAGGCGGAAATTTTAGGGGATAAGGTTGGATGACTGACTTCCACATCAC
TGCCCGTGGACTAGTCTGGATCAGTCTACAGACAAATATCGTGTCCGTAGTGATGGTCAACTTTGGAGATCTACGTCAGC
AGTGTATACTCCCCTGTGCGGCTGGGCCCTTCGATGGCCCCGATCCTATCAAGGTCGGTATGGCAAAATCATCATGCCAT
TGCTTGGTGCTACATTTCATTTAGCAGTATCTTTTAACACCGGCTCATTCAATGTGGAGGAAATCCAAACTCAGGAATTA
GGAGTGCACAAGAATTTGATAGAATGACATTTGCCATTCCAAGGAATTGTCTT-GACTTGTTCCTACGTAAAAAAAAATG
AGCTTTACGTGG-ATGCGATGTGTAGTTTCCTCCAAAAACACAGGAAACGAATAGTATTTCTATGAAATTCCTGTAAGCA
TTTCTTACAAACCC-AATGCATCTATTCTTGTGTGTGTGTTTTTCTATGAAAATTCTCCAAACAGAATGAGGCCAAACCC
AGT--------TCTCAACCTGCTTTCTGGGTGTTGTGGGAATGCGGGTCTTTGGCCCAGCAAGACAACGGCGCAGCTAGT
CTTCAGGTGGGGCCTCCAGAGAAGAACTTGTAGCAGTGAAAGCTCGCCCTTGGAACGGAAAAGAAAACCCTAACCCCTAC
CCACCCCCTTGGCGGCGCCCGATTGAACG-GCCGCCGTGAAAGCTCGCCGGAGTCGTCTATGACCGA------ATAACAA
CCACCACCAGAATGAAAACCTACCACGGGGTTTCCCCA---GGCGG---CCGCCGCAGCCGTTCTCAAATCGGCGCGAGC
GAGGAAGCCGCCGAAATGGCCGGCGCTCGCCGCAGTCGCCGCCGCTCCCAGATCGCGGTGACCCGCCCCAGTCGCCGTAG
CCGCTCCCAAATCGGGGCGAGCGAGGAGGATGATGGGCTGGTCCGCCCCGGCCGCCGCCGCCGCTCCCAAATCGGGGCGA
GCGAGGATCGCC---GCCGCCGCCGCCGCAC---CTCTCCGGAGGCGCCTGTCCCTCTGCCGGGCGACGGCGATACGCCG
CGGA---ACGGCCGTC---GTCCCCCCGCCCCGTGCGAGTCGCTGCCGTTGGATATGCTTTGGGAGATCCTTCTCCTTCT
GCCACCGCAGCCGTCGTCCCGCCTGCTCGCGTCCTTGGTCTCCAGGCGCTGGCGAGGCCTCGCCACCGACCCCAACTTCA
TCCGCCAGTTCCAAGCCCGCCGCAGGAGCTGGAAGCCGCCCCTGCTCGGCTTCTTCGAGCGCCGACGGAAGATCGTGTTC
AACCAGGACATCCTGCACCCTCCCGACCGTGTCCCTGCTGAGCGCATCCACATCCCGTTCGGCATGGCCTCCCGTGGCTT
TGAAGTTTTGGGGTGCCGTGGCGGCCGCGTGCTTGCCTTGCACCGGGTGTTAAGGCAGCTTATTGTGTTCGCCCCCATCA
CCGGTGAGCAGCGCTACCTGGCTGTTCCTGCCGAATTCGGGCCGCCGTCCATCCTCTACGGGGCGGTGCTCTGTGCTGCT
GGCGAGCAGGACCATGTGCACGGCCACTGTCATTGCAGCCCTTTCAAGGTTGTCCTGGTGTCCCACAGAAGAGATCATCA
ACCACAGGCCTGTGTTTTTTCCTCGGAGACTGACACATGGAGCAATATCATATCAACAAAGTATCCATGCGAGCTCCATG
GTGATAGTGTTCCCGCGACCCTTATTGGTAATACACTCTATTGGCTGCTTTCGTGCAATGCCATATTTTGGTTTGATTTG
GATATGCAGAGCCTAGCTGTCATCATGGGGCCTCCTGGTATGAATGAATCTGGCAACTATAGGATCATCAAGCCTGAGGA
CGGCGCCGATGGCCTAGCCATAGCCATATTCCTCTTCCCGAACCTTCAGATCTGGCAGAGGGTGATTAACTCTCAGGGTA
TTGCCACATGGTTTTTGCGGAAGACTGTTGAAATGCATAGCACTCTTGGGATCCCTCATCAGACTAGGAGGAAGGTGTGG
CAAGACAAAGTGCTGGGGTATGATGAAGATAACGATGTGATCATCCTCTATGTGGATGACAGTGCCTACATGCTTGAACT
TAAGCAAATGCAATCCAGGAAACTTAATGGAACCCGTTCTATGAAACAATGTCATCCTTTCACGAGTTTCTATCCGCCAG
GTAATTCCTCATTCTTAGTATATTTATATCATAGAGTAACCCAATCTAGTTATGTTCTGTACAAGATTGCTTGAATACAG
ATATTGTGATTCTGAAATTTTCACCTATAACTTGTATCGAGTAAGCAATTGTCGCTGATAAAACTTATCTAACACCAAAT
TTGATGTCAAATGAGTG--AGTTAGCTGGCAAGTTTGAAACCTCAAAGCTGGTTATAC-TTTTATCTCTTAATATCTGTT
CTGATCTTGTTATTAATCGTAATTCCAT-AAAAACAACTTCTGTTGAATCCATACTTTGTGAAATAACTGTGATTTTGTC
ATT----CATGACCCCTTCTGCTGGTGCGTATTACATTTGTAGCACATAGG-ATAAATTGAATTTCTTGTCTCGGGATCC
TTTTTATTTAAGACAGAATACTTGACATCTGCTGGTGCCCTTGGTTGGCCGTCTATACCGGCACTTCTTTGATTCGGACA
CGCTCCTGGAGCTGTGTCTCCTTCCAGCTCCTTGGGCTCACTGGCGACCCTGCTGTCCGGTCCCGTTGGCCTGGATCTGC
CCTCCCCTCCAGATCCTGGCTCGTCTGGGTCTACGGCCACCTTCACATCC------------------------------
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--CCTTCCTGCGGTCGCGGTTCCGGCCTATGCCCGACTTCCTCTTCTCTGATTTGTGCTCTGATGGCTTGGGATTGCATC
CCTGCTTCCTATGCTGGCAGCGGCGACCCACGGGTGCCGTCCCCTTCTTGGAGGCACTGCCATGGCCTTTATCTATGGCC
CTCTTCTAGCATCAGGGGAAACCCTAGGTCCAGTTATGTGGATCGGACGGCGACGCCATCTCGGTGTCGTTCTCCTTCGT
GAAGGCGTTGTCTTGTTTGCTCGCGGCGTCCTGGGTTCTGGA----------TTGGTCATCTAGTTGTTGGTTCGGGTTG
CTTCTCAGGGCGGTGAGTTTAGCTGTGCTTTTCTCTGTTTGGGCCGAGCATCCCTTGTATCTCTGCTCTGGGCATCATAT
TCACGCCTCTTGCGTCCGTGCCATGTATTGTACCACCTCTTGTACTCACTCTAACTTCTATAAATGGAATGATATGCAAG
CTTTGTGTTTTCGCGAAAATAAAAGAATACCTGACACCAATTTTCTGCTAGACTTTATTGTTTTGGCCTAGTGTTGTTTG
CTTGACATGACAAGGGATGATCTTACATGAAAAAAGTTATAGGACATGTTTT--TCTTCTTGGTAGCTAAATTCTCCATT
CGAAGGTAGCTAAGTATGCTACTTTTATGAATATTCTTTGCATTTTACAACATATGTGGCTTTTCAAAATCTATTGCTGG
TACTGTAAAGAGTGAGTTATAACACATATATAA---AAATGAGTTAAATGAGATGTTTCTAATTGTCTCATTGTCACCTT
TTGTTCTCCATTGGTCTCTTCATCATAACTGTTGCTAATTGTCTGACTTTTATGCTTCTAGACATGGCCATCTAAGAAGC
ACTGATATGGGAACATGGAGAGTTGGAGACGCAGATATGGATGCAGAGTTTTAGGATATGGCATTTTCCAGAAACAGCCA
TGCGGGGATGCAGCGAGTATATAAATGAAAAAGTAGAGCATGTGATGTAATGAGG-ACAATAGTATGTATC---------
-------------------------------------------------------------TGTAAAATGTAAGATCAAA
GTAGTGGCCATTTGTTGTCTGCGGGCCTTGGTTTACCTGTGTGTATGTGGCTGAGCTTAATGCAGCTGATGCC-------
GCAAGTATATGTAAGTAAATATTTCAGGAAGGGAAAAGACAATGCAGCATGTAGTATGGACATGATCATATCTGTAAGAT
GTGGGATCAAGTCTTGATTCTACCATGTGGTGGACA--------------------------------------------
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>chr5B_52
---------------------------------------------------TCAACGTCGTCCGACTTCGATCCACGGAC
CAATCCGCTTGTCTGTTTCCCGCAAACCGAAAACAAACTAGGGGACTTTGCGGGAGTCCAAACCGTCGCCACGTAGGACT
ATGGCACCCCCGGCCCACGCGAA-GGGACAACTAGAACATATGTGCTAGTTGAATGCAAGTTTGAACTATTTTATTTAAA
AACTCATTTGGATTGTAATATTTAAATTAGAACTACTGTTGCATTTGAATATTTTCAATCTTCAGTGATTTGATATGCCA
CTATATTGAGCTCGCGTATATTTTTTGAAAAGAGGCAAAAAAATTAGGGGACAAGGC-----------CTCCCACGTCAC
TGCCCGTGGACTGGTTTGGATCAATCTACAGACAAATACCGTGCCCGTTTTGAGGGTCAGCATTGGAGATTTGTGCCAGC
AGCGCATACTCCCCTAGGCGGCTAGACCCTTCGATGGCCCCGGTCCTATCAAGGTCGGTATGTCAAAATCATCATGCCAT
TGCTTGGTGCTACATTTCGTTTAGCAGTATCTTTTAACACCGGCTCATTCAATTTGAAGAAAATCAAAAGGTAGGAATTA
GGAGTGTACAAGAACTTGATAGGATGACACCTACCATTCTAAGGAGTTGTCTTTGACTTGTTCCTACACAAAAAAATGAG
ATTTGAGT---G-ATGCGATGTGTAGTTTCCT--AAAAACACAGAAAATGAATAGTATTTCCACTAAATTCCTGTAAGCA
TTTCTTACAAAACCGAATGCATCTATCCTTGTTTTTGTGTTTTTCTATGAAAATCCTC----CAAAATGAGGCCAAACCT
GGAGATAATTGTCTCAACTTGCTTTCAGGGTGTTGT--------GGGTCTTTGGCCCAGCAAGACAACGGCGCAGCTAGT
CTTCAGGTGGGGCCTCCAGAGTAGAACTTGGTAGCAGTGTCATC--CCCTTGGAACGGAAAAGAAAACCCTAACCCCTAC
CCACCACCTTGGCGGCGCCCGATTGAACGGGCCGCCGTGAAAGCTCGCCGGAGTCGTCTATGACCGA------ATAAAAA
CCGCCACCAGAATGAAAACCTACCACGGGGTTTCCCCA---GGCGGCCGCCGCCGCAGCCGTTCTCAAATCGGCGCGAGC
GAGGAGGCCGCCGAAATGCCCGGCACTCGCCGCAGTCGCCGCCGCTCCCAGATCGGGGTGACCCGCCCCGGTCGCCGTAG
CCGCTCCCAAATCGGGGCAAGCGAGGAGGACGGGGGGCTGGTCCGCCCCGGTCGCCGCCGCCGCTCCCGAATCGGGGCGA
GCGAGGATCGCC---GCCGCCGCCGCCGCCGCAACTCTCCGGAGGCGCCTGTCCCTCTGCCGGGCGACGGCGATACGCCG
CGGAACGACGGCCGTC---GTCCGCCCGCCCCGTGCGAGTCGCTGCCGTTGGATATGCTTTGGGAGATCCTTCTCCTTCT
GCCCCCACAGCCGTCGTCCCGCCTGCTCGCATCCTTGGTCTCCAGGCGCTGGCGAGGCCTGGCCACCGACCCCAACTTCA
TCTGCCAGTTCCAAGCCCGCCGCAGGAGCTGGAAGCCGCCCCTGCTCGGCTTCTTCGAGCGCCGACGGAAGATCGTGTTC
AACCAGGACATCCTGCACCCTCCCGACCGTATCCCTGCTCAGCGCATCCACATCCCGTTCGGCATGGCCTCCCGCGGCTT
TGAAGTTTTGGGGTGCCGTGGCGGCCGCGTGCTCGCCTTACACCGGGTGTTCAGGCAGCTTATTGTGTTCGCCCCCATCA
CCGGGGAGCAGCGCTACCTGGCTGTTCCTGCCGAATTCGGGCCGCCGTCCATCCTCTACGGGGCGATGCTCTGTGCTGCT
GGCGAGCAGAATCATGTGCACGGCCACTGTCATTGCAGCCCTTTCAAGGTTGTCTTGGTGTCCCACAGAAGAGATCATCA
ACCACTCGCCTGTGTTTTTTCCTCGGAGACTGACACATGGAGCAATATCATATCAACAAAGTATCCATGCGAGCTCCATG
GTGATAGTGTTCCCGCGACCCTTATTGGTAATGCACTCTATTGGCTGCTTTCGTGTAATGCCATATTTTGGTTTGATTTG
GATATGCAGAGCCTAGCTGTCATCATGGGGCCTCCTGGTATGAATGAATCTGGCAACTATAGGATCATCAAGCCAGAGGA
CGGCACCGATGGCCTAGCCATAGCCATATTCCTCTTCCCGAACCTTCAGATCTGGCAGAGGGTGGTTAATTCTCAGGGTA
TTGCCACATGGTTTTTGCAGAAGACTGTTGAAATGCATAGCACTCTTGGGATCCCTCATCAGATTAGGAGGAAGGTGTGG
CAAGACAAAGTGCTGGGGTATGACGAAGATAACGATGCGATCATTCTCTATGTGGATGACAGTGCCTACATGCTTGAACT
TAAGCAAATGCAATCCAGGAAACTTAATGGAACCCGTTCTATGAAACATTGTCATCCTTTCACAAGTTTCTATCCGCCAG
GTAATTCCTCATCCTTAGTAT--TTATATCATAGAGTAACCCAATCTAGTTATGTTCTGTACATGATTGCTTGAATACAG
ATA--GTGATTCTGAAATTTTCACCTATAACTTGTATTGAGTAAGCAATTGTCGCTGATAAAACCTATCTAACACCAAAT
TTGATGTCAAATGAGTTTAAGTCAGTTGGCAAGTTTGAAACCTCAGAGTTGGTTATATTTTTTATCTCTTAATCTATGTT
TTGATCTTGTTATTAATCTTAACTCCAT-AAAAGCAACTTCTGTTGAATCCATACTTTCTGAAATAACTGTGATTTTATC
ATTTGTTCATGATCCCTTCTGCTGGTGCGTGTTGCATTTGTAG-ACATAGAAATAAATTGAATTTCTTGCCTCGGGGTCC
TTTTAT--------------------------------------------------------------------------
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------------------------------------TCAATTTTCTGCTAGACTTTATTGTTTTGGCATAATGTTGTTTG
CTTGACATGACAAGGGATGATCTTACATGAAAAAGGTTATAGGACATGTTTTCTTCTTCTTGGTAGCTAAATTCTGCATT
CGAAGGTAGCTAAGTATGCTGCTTTTATGTATATTCTTTGCATTTTACAACATATGTGGCTTTTTAAAATCTATTGCTAC
CACTGTAAGGAGTGAGTGATAACACATCTATAA---AAATGAGTTATATACGATGTTTCTGATTGTCTCATTGTTCCCTT
TTC-TCTCCATTTGTCTCTGCATCATAACAGTTCTTAATTGTCTGACTTCTATGCTTCTAGACATAGCCATCTAAGAAGC
ACTGATATG-GGAACA-------TGGAGACGCAGATATGGATGCAGAGTTGTAGGATATGGCATTTTCCAGAAACAGCCA
TGCAGGGATGCAGCAAGTATATAAATGAAAAGGTACAGCATGTGATGTAATGTGG-AAAATAGTATATACTCCCTCCCGT
CCCATAATGTATAGTGTTAAAAAAGGTCTTAGATTATGGGACGGAGGGA-------GTATTTGTAAGATGTAAGATCAAA
GTAGTGCCCATTTGTTGTCTGCGGGCCTTTGTTTCCCTGTTTGTATGTGGGTGAGCTTAATGCAGCTGATGCTGCAACCT
GCAAGTATATGTAAGTAAATATTTCAGGAAGAGAAAAGACAATGCAGCATGTAGTATGGACATGATTATATCTGTAAGAT
GTGGGATCAAGTCTTGATTCTACCATGTGGTGGACA--------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------
>SNPs
-------S-------------SS-S-S--S--------S-S---------------S---S-------------------
-------------S------S-----------S----------S------------------------------------
------------------------S-S-------------S-------------------------S----------S-S
------------------------------------S---------------------S-----S---------------
-----------S-S-SS--------SS-------S-------------SS----S----------SSS------------
---S----S----S------------------S------S--SS------------------S--S-----S------S-
------S-----------------------------S-----------S---S---------------S-----------
------------------------S-------------S------------S-S-S-------S----------S---S-
-S---S--------------------S------S----S------S--------------S--S-----------S----
S-----------S---S-----S-S----S--S---------------------------S--S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S--------------------------------------SSSSSS-------
--------------------------------------SSS---S--------------S--------------------
---------------------------S----------------------------------------------------
---------S------------------------------------------------------------S---------
------------SSS-------------------------------------------------S---------------
------------S-S-SSS----S--S-----------------------------------------------------
-------------------------------------------------------------------------------S
-------------------------------------------S------------------------------------
---------------S----------------------------------------------------------------
------------------------S-----------------------------S-----------------S-------
----S--------S---S-S----------------------SS------------------------------------
--------------------------------------------------------------S----S------------
---------S----------------------------------------------------------------------
-------S--------------------SS--------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
----------------S-------------------------------S---------------------------S---
--------------S-------------------S--------------------------------S------------
--------------S-------------S-----S---------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------S------S----------
-S------------S------------------------S-----------------------S---------------S
S------SS-----------------------S-S------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS-------------------------------------------------------------S----------------
-----S-----------------------S---------------------------------------S----S-----
-------------------------S-----S-----S------------------------------------------
S------S------------------------S---------SSSSSSSSSS---------------------S------
----SS---------------------------------------------S-----S----------------S---S-
-------------------------------------------------------------S------------------
-----S--S-----------------------------------------------------------------------
-------------------------------------------------------------------------------S
-------------S------------------------------------------------------------------
---------------------------------SSS------------------S-------------------SS----
--------------------------------------------------------------------------------
-------------------------------------------------S---------S-----------S--------
-------------------------------------------------------S-----------S---SSSSSSSSS
SSSSSSSSSSS-----SSS-SSSSSSSSS-SSSSSSSSSSSSSS-SSSSSSSSSSS------------------------
-----------------------------S--------------------------------------------------
------------------------------S------S------S------------------S----------------
---------S-----------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1113
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-----------------------------------------------------TCGTCTATGACCGACTCCCA-------
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>reverse_3055
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--------------CGTCTCCTTCCAGCTCCTTG----------------------------------------------
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>forward_1815
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-----------------------------------CCTTACACCGGGTGTTCAGA-------------------------
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>reverse_3761
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TAAGGCGCTGTCTTGTTTGC------------------------------------------------------------
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>forward_3675
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-------------------------------------------------------ACTGCCATGGCCTTCATCTG-----
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>reverse_5044
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---CGTGTTGGGCGTGTTTTCAT---------------------------------------------------------
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--------------------------------------------------------
