>input_sequence_22640
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------------------------------------------------------ATGGAGGTAGACGGACGCGGAGATGT
ATTAGCTCCGTCCCCTCGCCCCGCTTGCGGCAAGAAGCGGCCGCTTTCCCCCTCAACTCCTCAGAA-----TTGCGGACT
CGTCCAAGTCCACCACCAGCGACGAGGACGACAACCCCTGGGCGCTCAGCGACGACGAAGAGGAGGATGAATACCACGGT
AAGGCACTGCTTCCTCCGTAGTTGATTCGACGCTTCTGTTCTGTACTTGATTAGTTTAGATCTATGTGTATCCTGATGCA
ATTGGCTCTCTCAATTAGAAACCAGTGCTCCTTGATGTAAGAACCTTTATCAACAAGATTTTCGTGCAATACTAAAGAAT
ATCTTGCTGAATTAGTTGCACCAACACCGTCAGTGTTTGAAACTTTGAATTTCAACCGAATACATTGCGTTGCTAACTAC
TTGTACGAAATTGAGACCTCGTTCAATAGTTGAACCACCGC-TGGACAAACTGTTGATCTTTTCTTTGGGTAACCTGTGC
CAGCTACTCAGATTTAGGTATGTTGTTAGCATTTCTGTAACACAATAATGCCTTTTGGGGAGAATAATATTTAAATGGTC
ACACACTCTTGATCTTAAACTAATAAACATGAATATGGCAAATCATTTTATAAGTAGAGTTTCTGGGAAAAGGTTACAAG
TAACTTAAAATTTAGCTGGCTATTCCACTGGTGCTCGGCTACTTTATTTTATTGGAGATTGTTATTCTCCACTAATTAGG
TCTAATTGTACTGAATCTAACCATAGTGAAGATCCTACCTGATCTTCCAATCTGCGAACATGTTTGTAATAATAACACAC
ACACACACACA------CACTTGGTATTAATGGTAATTTTCACTTCAAAAGAACATA-----------------------
-------TAATTCGACGCATGTATACAGCCTTGTAGACTGCAATTGTTTTGACAGCTAATCTTTCTCAAGTGATATATAC
TTTTTCGAGGAATATTTCTCAAGTGACCCATCTAATAATTTTGGCTTCTAAATCAATGGTAGATCTTTGTCAAAAAATCA
ATGATAGATGGTGCTCAATGTTTTTTGTTGTTGTTGATTTGGTTAATGATTTCGTGTGTAGGGAAGTACCGCCCTTTTAC
AGTTGATGATTTCCCAAGGGTTAGCAGTGATGAT---GAGCAGACAGTTGCCGTGTATAAGAATCCAGAGATTTCTATCC
GAGGCCCAAGACCGCTTAGGAGATTTCCAGCATTTAAGCCAGAAAGTCGGCATTCATGTGATATGGAGTATCAACTTGCC
GATGAATCTGAAAGTAAGTGTTTTTTTAATTAAAGTTCTGTCACTGAGATGCCCTGCATCAAATTATCATCAAGAGAAAA
GTCCAAAGTTTCTCAGCTTAGGAAGAATTTTTTTTATGAGTACCAAGATATCTTGATGAGTGGTCCCATCACACACCAAA
CTTGATCCTCAATAAAT-GGGGGAAAACCCTTGTGCATCAGCTGTCAATCTAGGAATTGAACCCGGGTGGTTAGTTAGCT
TTACCTGCTGTCAATTGTCAAGTGTTATCCTGTTCGTCTATTCAGATTGGCATCAAATGAAAGAAATTTGAGCATTTCCC
CATCCACCCCCAAATCCAAACTACATTCCAGATCCCTCCTCTGCTCACTTCTCAGCTCTTCCTTTGTCAATCCTTTGTGA
TAACAATGAACAAACAGGATTTGGTAGTATATTTTCCAGAACTGAACCACTCTTGATGAAACAAAGCAGATTTTCTCTCA
TCATTTGTTCATGACTATAGATCTCTGATAATACCTCATGCTCTGTTTGTTAATTTTGCAGTCAGTTTCAGCAATGTTGG
GACCGTTGATTGCTCACATAAGGGTTATTGCAGATCGATGGACATGGTGCAGTTCGTTGATCTCAAAATCGCTGGCTATC
AGCATGCCCGGCCTGGACGTGCCAAAATATTTGGGTTTTTCGCAGCGCGGGATCGGGTCGAACCTTTGCGCAATTATGTC
TATAGGCGTCAAATTGAGAATTATGAAGCTGTAACTGTGAAGCCAAAGACGGTAATCTGACTATCAAACTTGCAACTTTC
TACTGGCCTGATTCTTTAATCATACTTACAATACACGTGCATGAGATGCAAGCACTGTATTG--AAAAAATTATTATATT
TAGGCTTTATTCTGGAAGTTTGAGATACTCACCTGAGTGCATGCTGCAATAGTTCAGTAATATCCAGTTTAAAGGTATCA
CGCCGAGTCAAATAATCTCACTAATTCACTATTAGACATAACACTTAATTATATCCAGACCAGACAGTTGTAGTGATTGC
AGCCGATCTATTGTAGTAATCACTAATTAAAGTATAGGATGTCATGCCTGTTGATCCAAATTGTAGGGTATGGCACGTTT
ATCACTGACTAGCTCTGCTCGAGGTATTGGCATAAGGAGCCGTGTGCTATTTGAATTCAAACTCTGTATATGTACTGAAG
ACCCACAGGAAGATGGGCCCAAAGGCGACCTTCTTATTGAAGGACGTACTGAATTCAGCACCATGTACACAACAGAATCA
TCCATTCAAAATCGGCGTCTTTATGGGGACAAGTTTTCACTAGATGTCAAGTTTGCGGCGCTGATTAATGCAGTCCAGGC
ATTCGTTGATGTTGAGATACTCCGTGCTCCTGATTGTGGCCTTAATCTGAATCTCTATGCCAAGACCAGTGGTTACGAAG
ATGTGATTCCTCTCTACCAGGGAGTTGCAGAAGCTGGCTGCAAAATAAGTTCAGTTGTAGCCGTGGTGATACGGAGTTGC
GTGTATCTTCGTATCGAAGGGACCCCCAAAGATGACGGACTTTCTCAGAAGCGGCTGCCCTGTGGTGCGTGGGAAGACAG
CTTCGACACTTGCTATCATGGAATAGTAGATAAGGCTGGTCATATTGGGGAGTAACTTATACTAGTGTCATGTATATGAC
ACTAGTCGAAGTTACGACCTTCATAGTGCAAAGTAACTAGTGTCATAGATGGCCTCATTTATTAGCTTGTAGACTCATCC
TTTTTTGGGAAGCGCTATGTTACAGTAACATATTATGTTACTCTAAATACCTCTCTCCTCATTAACTACATGCCGCATAA
GCAAAATTTTCTTGAAGTGTGTTATGTTACTACTTAAGTTACTCCCACTATGACTAGCCTAAAGTGGTGAATCTTGACGA
ATTTACCATGATTTCGGTGAAGATCACCTGGAGAACCTTGGATTGA----------------------------------
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------------------
>chr5A_1_TraesCS5A01G081000
AATTTGTGTTTAAATTTCTTTTTTCAAAAAAGTTGCGAGTTTTGATAAAATACATCGAGAAATCATAAAATGTTCTTGAA
TTCAAAAAACAAATGGGAAATCAAAAAATGTTCGTGATTTCAAAAAATTGTTTGCGTATTAGCAAACTCATGATTTCAAA
CAAATGCTCGTGAAATAGAAAATGCTCATGATTTTCAGAAAATAATCGTGTATTCAAAACATATTCAGAAATTTGAAAAC
AATGCCCATGAAAATTTTGAAAATGTTCACAGAAATTAAAACAGATTCAGAAAGCTGTGAGTTTAAAAAAATCGAGAATT
ATAGAATATTTGTGAATTAAAAAAATCAGGAAATCATAAAATTTCCGTGATTCGGAAAACTGTTTGCATATTATAAAAAA
AATGCAATTTCAATTTTTTTTACGTGAAATAAGAAATGTTCATAATTTTTAAAAAATGATCATGTATTCAAAACATATTC
GGGAATTTTAAAAAATGTCCATGAAATTATACAAAATCTTCACACATCTACATAATCTGATTGTTTTTCACCCGTTGCAA
CGCACAGGCATATTTGCTAGTAAAACTTTCATGAATTTTAAAAAATTCACAGAATTTGATAAAATCACGAATTAGAAAAA
TCGTAATTTGGGAAATTTTGGAAAAAATGACAGAGTTCACGAGAATTTGAAAAAGTTCATGAATTTGCAATAAGTTCTTT
AATCTGAAAAGAATTCACGCATTTGTAAATTAAAAATAAAATAAAAACGAAAACCCAAGACAAACCCATGCCAGGAAAAC
CCGCAAGAAAAAAACGCGCAAAAAAAATGCGCGGAAAACTGTGGAATAAACAAACCTACATGGGCCGGCTCATTTGTCAT
GTCGTGCCAGTTAGCGAAATTGCCGCTTAGGGCGCCATCTGGGGCTGGAGTTGCCCTAACGTGCACTTGAAATCCTCC--
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------------------------------------------------------------------------AAGTCCAA
ATTAAGTAACGGCAAATAATCGAGTCCCC--------------------GCGCCATGGAGGTAGACGGACGCGGAGATGT
ATTAGCTCCGTCCCCTCGCCCCGCTTGCGGCAAGAAGCGGCCGCTTTCCCCCTCAACTCCTCAGAA-----TTGCGGACT
CGTCCAAGTCCACCACCAGCGACGAGGACGACAACCCCTGGGCGCTCAGCGACGACGAAGAGGAGGATGAATACCACGGT
AAGGCACTGCTTCCTCCGTAGTTGATTCGACGCTTCTGTTCTGTACTTGATTAGTTTAGATCTATGTGTATCCTGATGCA
ATTGGCTCTCTCAATTAGAAACCAGTGCTCCTTGATGTAAGAACCTTTATCAACAAGATTTTCGTGCAATACTAAAGAAT
ATCTTGCTGAATTAGTTGCACCAACACCGTCAGTGTTTGAAACTTTGAATTTCAACCGAATACATTGCGTTGCTAACTAC
TTGTACGAAATTGAGACCTCGTTCAATAGTTGAACCACCGC-TGGACAAACTGTTGATCTTTTCTTTGGGTAACCTGTGC
CAGCTACTCAGATTTAGGTATGTTGTTAGCATTTCTGTAACACAATAATGCCTTTTGGGGAGAATAATATTTAAATGGTC
ACACACTCTTGATCTTAAACTAATAAACATGAATATGGCAAATCATTTTATAAGTAGAGTTTCTGGGAAAAGGTTACAAG
TAACTTAAAATTTAGCTGGCTATTCCACTGGTGCTCGGCTACTTTATTTTATTGGAGATTGTTATTCTCCACTAATTAGG
TCTAATTGTACTGAATCTAACCATAGTGAAGATCCTACCTGATCTTCCAATCTGCGAACATGTTTGTAATAATAACACAC
ACACACACACA------CACTTGGTATTAATGGTAATTTTCACTTCAAAAGAACATA-----------------------
-------TAATTCGACGCATGTATACAGCCTTGTAGACTGCAATTGTTTTGACAGCTAATCTTTCTCAAGTGATATATAC
TTTTTCGAGGAATATTTCTCAAGTGACCCATCTAATAATTTTGGCTTCTAAATCAATGGTAGATCTTTGTCAAAAAATCA
ATGATAGATGGTGCTCAATGTTTTTTGTTGTTGTTGATTTGGTTAATGATTTCGTGTGTAGGGAAGTACCGCCCTTTTAC
AGTTGATGATTTCCCAAGGGTTAGCAGTGATGAT---GAGCAGACAGTTGCCGTGTATAAGAATCCAGAGATTTCTATCC
GAGGCCCAAGACCGCTTAGGAGATTTCCAGCATTTAAGCCAGAAAGTCGGCATTCATGTGATATGGAGTATCAACTTGCC
GATGAATCTGAAAGTAAGTGTTTTTTTAATTAAAGTTCTGTCACTGAGATGCCCTGCATCAAATTATCATCAAGAGAAAA
GTCCAAAGTTTCTCAGCTTAGGAAGAATTTTTTTTATGAGTACCAAGATATCTTGATGAGTGGTCCCATCACACACCAAA
CTTGATCCTCAATAAAT-GGGGGAAAACCCTTGTGCATCAGCTGTCAATCTAGGAATTGAACCCGGGTGGTTAGTTAGCT
TTACCTGCTGTCAATTGTCAAGTGTTATCCTGTTCGTCTATTCAGATTGGCATCAAATGAAAGAAATTTGAGCATTTCCC
CATCCACCCCCAAATCCAAACTACATTCCAGATCCCTCCTCTGCTCACTTCTCAGCTCTTCCTTTGTCAATCCTTTGTGA
TAACAATGAACAAACAGGATTTGGTAGTATATTTTCCAGAACTGAACCACTCTTGATGAAACAAAGCAGATTTTCTCTCA
TCATTTGTTCATGACTATAGATCTCTGATAATACCTCATGCTCTGTTTGTTAATTTTGCAGTCAGTTTCAGCAATGTTGG
GACCGTTGATTGCTCACATAAGGGTTATTGCAGATCGATGGACATGGTGCAGTTCGTTGATCTCAAAATCGCTGGCTATC
AGCATGCCCGGCCTGGACGTGCCAAAATATTTGGGTTTTTCGCAGCGCGGGATCGGGTCGAACCTTTGCGCAATTATGTC
TATAGGCGTCAAATTGAGAATTATGAAGCTGTAACTGTGAAGCCAAAGACGGTAATCTGACTATCAAACTTGCAACTTTC
TACTGGCCTGATTCTTTAATCATACTTACAATACACGTGCATGAGATGCAAGCACTGTATTG--AAAAAATTATTATATT
TAGGCTTTATTCTGGAAGTTTGAGATACTCACCTGAGTGCATGCTGCAATAGTTCAGTAATATCCAGTTTAAAGGTATCA
CGCCGAGTCAAATAATCTCACTAATTCACTATTAGACATAACACTTAATTATATCCAGACCAGACAGTTGTAGTGATTGC
AGCCGATCTATTGTAGTAATCACTAATTAAAGTATAGGATGTCATGCCTGTTGATCCAAATTGTAGGGTATGGCACGTTT
ATCACTGACTAGCTCTGCTCGAGGTATTGGCATAAGGAGCCGTGTGCTATTTGAATTCAAACTCTGTATATGTACTGAAG
ACCCACAGGAAGATGGGCCCAAAGGCGACCTTCTTATTGAAGGACGTACTGAATTCAGCACCATGTACACAACAGAATCA
TCCATTCAAAATCGGCGTCTTTATGGGGACAAGTTTTCACTAGATGTCAAGTTTGCGGCGCTGATTAATGCAGTCCAGGC
ATTCGTTGATGTTGAGATACTCCGTGCTCCTGATTGTGGCCTTAATCTGAATCTCTATGCCAAGACCAGTGGTTACGAAG
ATGTGATTCCTCTCTACCAGGGAGTTGCAGAAGCTGGCTGCAAAATAAGTTCAGTTGTAGCCGTGGTGATACGGAGTTGC
GTGTATCTTCGTATCGAAGGGACCCCCAAAGATGACGGACTTTCTCAGAAGCGGCTGCCCTGTGGTGCGTGGGAAGACAG
CTTCGACACTTGCTATCATGGAATAGTAGATAAGGCTGGTCATATTGGGGAGTAACTTATACTAGTGTCATGTATATGAC
ACTAGTCGAAGTTACGACCTTCATAGTGCAAAGTAACTAGTGTCATAGATGGCCTCATTTATTAGCTTGTAGACTCATCC
TTTTTTGGGAAGCGCTATGTTACAGTAACATATTATGTTACTCTAAATACCTCTCTCCTCATTAACTACATGCCGCATAA
GCAAAATTTTCTTGAAGTGTGTTATGTTACTACTTAAGTTACTCCCACTATGACTAGCCTAAAGTGGTGAATCTTGACGA
ATTTACCATGATTTCGGTGAAGATCACCTGGAGAACCTTGGATTGACACACAGCTTCCTGTACAAGTTACTCTAATATGT
TGCTCGAACTTTGATTGCTCGCTGCCCTGATGTTATCAGCACTCCACTTCGTTCCTGAACCAGAGTTATGTATCTGCTGT
TTTGAAACAACTAGATGATGCCCTACGGGGTACCGTCATTGACGTGGAAATTGTTTGCAGCACATTTCGGTGAGATTTAG
TTGTATAGAACATGAATACTTAGATTAATAATATAAAAACAGAAACTAAAATACATAAGATTTTTCTTGATTATTATATA
GTTTTAAAATGTTGTTCAATATGGAAATGACTTAGCATTTTCTGATGCATGTTATAAGGTGACATGACTGC-TGACATAT
TTGAATGTTGAGGAAAATTGGCTAGTGGGAATCACCTATTTTCCCTGGCACTAGCAGTGAACGATAAAGCACATGTGTAA
CG-------CATGTGCTAATCTTTTGTTCTTGGTCATGTTGGAATTCCGAGTCAGAAGCATAATGTTGTTGGATGCCTCC
CACCTTGTTTCTCCACTGTACATTTGAGATTAGATGGTTCATAGCGTAAGTTTTCATATTTGCACCAAGATGAGGTTTCC
ACCTGATACGTCATAAGTTTCCATAAAAATACATGTGTTCTATTATATTTGATTACTGTACAAATGTAAATATTTGTAAA
AATATAAGTAGCATAACATAATGAAAAAAAACCATCAACCATTTGCATGTTCAGAAGGATATTTGTTTCTTTGTATAAGT
AGTATAATAAATTGGAAACGGCTTTAGCATTTTCTCATGCATGTTTGCATGTTATAAGGTGATATGTCTCCGGAGGTGAC
AT--TTGATTGTCGAGAGAAATATGTTAGCGAGGATCATATATTTAGGTGTATACTAGATGATACACCATACATTGTTTC
AGAAGTTGTTTGCAATATGTTTCAATGGGATTTGGTTGTATGGAGCACAAATATTTGAACTGATAATATAAGAATCAAAA
CCATTCACAATCAGTT--
>chr5D_917
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------------------------------------ATCTGGGGCTGGAGTTGCCCTAACGTGCACTTGAAATCCTCTTA
TACCAAATTAAGTTCTTTAAAAGAAAGTTCAAATTAAGTTTTTATTTGGAAATGGAGGCGTGCCCCCGGCCTCTGCATCA
TAATGATGCATGCAACCATTTTATTAAAAATCCACGAAGTATTAAAAAGTCATAAGAGTATTACAGCTCGCAAGCGAAGC
GAACCAAAAGAAAAAAAAAGTACATGCTGACAATCACAACCGATACGGTAATATGAAGGATAAGCTCCCTAGACTCATAT
CCTGTTATGCGACCGCCATCTGAACCCGTTGATATAGCCCGTGCTACCATCTCCCACTGGTTTCATCCAGTAACTGGTTT
CACCCAGTAACCAAAGGCTCCCTGGAGTCCATAGGAGTAAGTAAGGACCATGTATGGATCCAAACGATAGCTCTGAAGAT
GACCTGCAAGAAAGTTAAAGTGTGTTGTCTGTTAAAAACCATATCATTCCTACGTTTTCATATAGCCCACAAAAGTCCAA
ATTAAGTAACGCAAATAATCAATAGAGTCCCCTCGCCCCGCTTGCGGCGGCGCCATGGATGTAGACGGACGCGGAGATGA
ATTGGCGGCGTCGCCTCGCCCCGCTTGCGGCAAGAAGCGGCCGCTTTCCCCCTCAACTCCTCAGAACGACGTTGCGGACT
CGTCCAAGTCCACCACCAGCGACGAGGACGACAACCCCTGGGCGCTCAGCGACGACGAAGAGGAGGATGGATACCACGGT
AAGGCACTGCTTCCTCCGTGGTTGATTCGACGCTTCTGTTCTGTACTTGATTAGTTTAGATCTATGTGTATCCTGATGCA
ATTGGCTCTCTCAATTAGAAACCAGTGCTCCTTGATGTAAGAACCTTTATCAACAAGATTTTCGTGCAATACT-------
------CTGAATTAGTTGCACCAACACCGTCAGTGTTTGAA--------TTTCAACCGAATATATT--------------
-TGCACGAAATTGAGGACTCGTTCAATAGTTGAACCACCGCCTGGACAAACTGTTGATCTTTTCTTTGGGTAACCTGTGC
CAGCTACTCAGATTTAGGTATGTTGTTAGCATTTCTGTAACACAATAATGCCTTTTGGGGAGAATAATATTTTAATGGTC
ACACACTCTTGATCTTAAACTAATAAACATGAATATGGCAAATCATTTTATAAGTAGAGTTTCTGGGAAAAGGTTACAAG
TAACTTAAAATTTAGCTGGCTATTCCACTGGTGCTCTGCTACTTTATTTTATTGGAGATTGTTATTCTCCACTAATTAGG
TCTAATTGTACTGAATCTAACCATAGTGAAGATCCTACCTGATCTTCCTAGCTGCGAACATGTTTGTAATAATAACACAC
ACACACACACACACACACACTTGGTATTAATGGTAATTTTCACTTCAAAAGAACATATAATTCGACGCATGTATACAGCC
TTGTATATAATTCGACGCATGTATACAGCCTTGTAGACTGCAATTGTTTTGACAGCTAAGCTTTCTCAAGTGATATATAC
TTTTTCGAGGAATATTTCTCAAGTGATCCATCTAATAATTTTGGCTT------CAATGATAGATCTTTGTCAGAAAATCA
ATGATAGATGGTGCTCAATGTTTTTTGTTGTTGTTGATGTGGTTAATGATTTCGCGTGTAGGGAAGTACCGCCCTTTTAC
AGTTGACGATTTCCCAAGGGTTAGCAGTGATGATGATGAGCAGACAGTTGCCGTGTATAAGAATCCAGAGATTTCTACCC
GAGGCCCAAGACCGCTTAGGAGATTTCCAGCATTTAAGCCAGAAAGTCGACATTCATGTGATATGGAGTATCAACTTGCC
GATGAATCTGAAAGTAAGTGTTTTTTTTATTAAAGTTATGTCACTGAGATGCCCTGCATCAAATTATCATCTAGAGAAAA
GTCCAAAGTTTCTCAGCTTAGGAAGAATTTTT-TTATGAGTACCAAGATATCTTGATGAGTGGTCCCATCACACACCAAG
CTTGATCCTCAATAAATGGGGGGAAAACCCTTGTGCATCAGCTGTCAATCTAGGAATTGAACCCGGGTGGTTAGCTAGCT
TTACCTGCTGTCAATTGTCAAGTGTTATCCTGTTCGTCTATTCAGATTGGCATCAAGTGAAAGAAATTTGAGCATTTCCC
CATCCACCCCCAAATCCAAACTACATTCCAGATCCCTCCTCTGCTCACTTCTCAGCTCTTCCTTTGTCAATCCTTTGTGA
TAACAATGAACAAACAGCATTTGGTAGTATATTTTCCAGAACTGAACCACTCTTGATGAAACAAAGCAGATTTTCTCTCA
TCATCTGTTCATGACTATAGATCTCTGATAATACCTCATGCTCTGTTTGTTAATTTTGCAGTCAGTTTCAGCAATGTTGG
GACCGTTGATTGCTCACATAAGGGTTATTGCAGATCGATGGACATGGTGCAGTTCATTGATCTCAAAATCGCTGGCTATC
AGCATGCCCGGCCTGGATGTGCCAAAATATTTGGGTTTTTCGCAGCGCGGGATCGGGTCGAACCTTTGCGCAATTATGTC
TATAGGCGTGAAATTGAGAATTATGAAGCTGTAACTGTGAAGCCAAAGACGGTAATCTGACTATCAAACTTGCAACTTTC
TACTGGCCTGATTCTTTAATCATACTTACAATACACGTGCATGAGATGCAAGCACTGTATTGAAAAATAATAATTATATT
TAGGCTTTATTCTGGAAGTTCGAGATACTCACCTGAGTGCATGCTGCAATAGTTCAGTAATATCCAGTTTAAAGGTATCA
CGCCGAGTCAAATAATCTCACTAATTCACTATTAGACATAACACTTAATTATATCCAGACCAGACAGTTGTAGTGATTGC
AGCCGATCTACTGTAGTA--CACTAATTAAAGTATATGATGTCATGCCTGTTGATC------------------------
---ACTGACTAGCCCTGCTCGAGGTATTGGCATAAGGAGCCGTGTGCTGTTTGAATTCAAACTCTGTATATGTACTGAAG
ACCCACAGGAAGATGGGCCCAAAGGCGACCTTCTTATTGAAGGATGTACTGAATTCAGCACCATGTACACAACAGAATCA
TCCATTCAAAATCGGCGCCTTTATGGGGACAAGTGTTCACTGGATGTCAAGTTTACGGCGCTGATTAATGCGGTCCAGGC
ATTCGTTGATGTTGAGATACTCCGTGCTCCTGATTGTGGCCTTAATCTGAATCTCTATGCCAAGACCAGTGGTTACGAAG
ATGTGATTCGTCTCTACCAGGGAGTTGCAGAAGCTGGCTGCAAAATAAGTTCAGTTGTAGCCGTGGTGATACGGAGTTGC
GTGTATCTTCGTATCGAAGGGACCCCCAAAGATGACGGACTTTCTCAGAAGCGGCTGCCCTGTGGTGCGTGGGAAGACAG
CTTCGACACTTGCTATCATGGAATAGTAGATA------------------------------------------------
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-------------------------------------------------------------AAGTGGTGAATCTTGACGA
ATTTACCACGATTTCGGTGAAGATCACCTGGAGAACCTTGGATTGACACACAGCTTCCTGTACAAGTTACTCTAATATGT
TGCTCGAACTTGGATTGCTCGCTGCCCTGATGTTATCAGCACTCCACTTCGTTCCTGAACCAGAGTTATGTATCTGATGT
TTTGAAACAACTAGATGATGCCCTACGGGCTACCGTCATTGACGTGGAAATTGTCTGCAGCACATTTCGGTGAGATTTAG
TTGTATAGAACATGAATACTTAGATTAATAATATAAAAACAGAAACTAAAATACATAAGATTTTTCATGATTATTATATA
GTTATAAAATGTTATTCGATATGGAAACGACTTAGCATTTTCTGATGCATGTTATAAGGTGCCGTGACTACTTGACATAT
TTGAATGTTGAGGAAAATTGGCTAGTGGGAATCACCTATTT---------------------------------------
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>chr5D_4595
TTGGCTTGATGCA-------------------------------------------------------------------
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----------------------------GAATCACATATTTTACCTCGCACTAGCAGTGAGCGATAAAGCACATGTGTAA
GCTGTTACACATGTGCTAATCTTTTGTTCTTGGTCATGTTGGAATTCCAAGTCAGAAGCATAATGTTGTTGGATGCCTCC
CACCTTGTTTCTCAACTGTTCATTTGAGATCAGATGGTTCATAGCGTAAGTTTTCATATTTGCACCAAGATGAGGTTTCC
ACCTGATACGTCATAAGTTTACATAAAAATGCATGTGTTTAATTATATTTGATTACTGTACAAATGCAAATATTTGTAAA
AATATAAGTAGCATAACATAATAATAAAAAACATCAACGA--TTGCATGTTCAGAAGGATATGT-TTTCTTTGTATAAGT
AGCATAATAAATTGGAAACGGCTTTAGCATTTTCTCATGCATGTTTGCATGTTATAAGGTGATATGTCTCCGGAGGTGAC
ATATTTGATTGTCGAGAGAAATATGTTAGCGGGGATCATCTATTTAGGTGTATACTAGATGATAC-CCATACATTGTTGC
AGAAGTTGTTTGCAATATGTTTCAATGGGATTTGGTTGTATGAAGCACGAATATTCGGACTGATAATATAAGAATCAAAA
CTATTCACACAATCAGTT
>SNPs
SSSSSS--S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------S--
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-----------SS--SS-SSSSSSSSSS-------------------------------S-------------------S
---S--SS----S-------------------------------------------------------------------
---------------------------------------------------------------------S----------
-------------------S------------------------------------------------------------
-------------------------------------------------------------------------SSSSSSS
SSSSSS-----------------------------------SSSSSSSS-------------S---SSSSSSSSSSSSSS
S--S-----------SS---------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
------------------------------------------------S-S-----------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------S--------------------SSSSSS-----S-------------S-------
--------------------------------------S---------------S-------------------------
------S----------------------------------------------------------------------S--
-------------------------------------------------S------------------------------
---------------------------S---------S---------------------------------S--------
--------------------------------S----------------------------------------------S
--------------------------------------------------------------------------S-----
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
----S---------------------------------------------------------------------------
-------------------------------------------------------S------------------------
-----------------S--------------------------------------------------------------
---------S----------------------------------------------------------------------
-------------------------------------------------------------------S---S--------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
----------S-------SS----------------S-------------------SSSSSSSSSSSSSSSSSSSSSSSS
SSS----------S----------------------------------S-------------------------------
--------------------------------------------S-----------------------------------
-----------------S----------------S------S------------S----------------S--------
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---------S----------------------------------------------------------------------
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--------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
--------S-----------------------------------------------------------------------
-----------S----------------------------------------------------------------S---
-----------------------------S------------------------S-------------------------
------------------------------------------------------------------S-------------
---S---------S---S---------S---------------------------------S-S-----S----------
------------------------------------------S---S-------------S-------------------
SS----------------------------------------------S-------------------------------
-------------S-----S----------S-------------------------------------------------
--------------------S---------S--------SS-------------------------S-------------
----------------------S-S-------SSSS-SSSSS--------------------S-S---------------
--S-----------------------------------------------------------------------------
-------------------------------S-------S-------------------------S------------S-
------------------------------------------S-----S------S-S----------------------
-S-------SSSSSSS--
>forward_898
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------------------------------------------------------------------------------AT
GTCGTGCCAGTTAGCGAA--------------------------------------------------------------
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>reverse_2838
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-------------------------------------CTGTCACTGAGATGCCCTGC-----------------------
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-----------------CGTGCCAAAATATTTGGGTTTTTCG--------------------------------------
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------------------------------------------------------TTGCAGCACATTTCGGTGAG------
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------------------
