>input_sequence_22634
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--------------------------------------------------------------ATGGGGAAGAAGGGCAAG
TGGCTGGGCGCCGTCAAGAAGGTGTTCAGCCCTGAGTCCAAGGAGAAGAAGGAGGAGGTAATAATTAATTTGTGGC-GGT
GGCTCTTGCTTCGGG-TTCTCCTCTCTACTAATTTATTTATGG---AGTTCTTGTGCTGGATTTACTTAGATTTT-ACTG
TTAGCTGCTGTGAGCTTGCTGTGGGTCTGATCAGGATTTGGCTGTTTCCTCC---ATGAATTAATTGCAAACAGTTCAGC
TTATTGGTTCCTCTAGGGGATTTTTTT-AGGCAACAGAATCTTGAAATTGGCATATTGTTTTGC-----TCACGCCAGCA
ATTAATTGCAGAGATTTCTTACTA-----GTACTAGTTTTGATAGCCTGTCTATTCATGG----TGATGGTTTCAGTTGG
GCTGTCATGTTTGGACAA-CATCTTTTCATTTCTTACTTGCCATTCAGTAATAACTGTAATAAATAGGGGATACCATCTT
TCCACCTACAATTGGATTGTCCAGTAGTTAATTTC-ACATATCTGTGATAAAACTAGTATTGTCTTTGCGATTGTGTTAT
CATAGTACTGTAATTTGAACTGAATTGTGATGACAACCCAAGCTTTGCCTTTCAAATGTACAGAAACTGAGGAAGAAGTT
GGCTGCAAGAGACCCCAGTCCACCAGATCTAACACCTTCCACTTCCTTGGAAGTCAATGTTTCGATGCCGCCGCCGCTGC
CGCC------TCCCGCCGTTCCATCCCCGCACCAAACTGAGGAGGTTCAGGTCCGTGATGTTGAGCTGGAGCAGGAGCAG
GAGCAGAGCAAGCATGTGACCGTGGAGGCAGCCCCTGATGCTCCTGCGCAGACATCGTCGGCATTGCCACCTGGTGTATC
GAGGGAAGAGCTAGCAGCAATCAAGATCCAGACCGCCTTCAGGGGATACCTGGTAATTTGACATCAGCTCTTGAATTAGC
AATTTCATGCCATTTGGAATGTTTTGTGAGCTCATTGTGACAGTTGGGATACTTAAATGGCTGGTTTCATTCTAACTATG
TCATGAAATTTATAAAAATTAAAGATTAAACGTGCTTGCATGCAGTCTTTTATTTTCTGATGGCCGCTGATCCGGTCTTT
GCATTTTTTCAACTTTGGAAGAAAAACTCTTGTATTGTTTATGGATTATGTCGCTGTACGAACATGCCTGAACACGCAAG
CAAATCCCCATGGTGGCCTTCCTCAAAACTTTCTCTTATCCTCTTCTGAGGTTTAGGTATTATCAGCTCAACAACTTGGT
CAGTTGCTTTTAATTTGAATTGAGGCCTCTTGGTGAAATTTCTTAGCTACTTACAGTTCCTCTGTTCTGTTCACAAATTT
TGCATGGTAAATCAACTTTTATGGTTCAACAAGCCAGTATTCTTGCCTACCAGAATCCTCTGTTCTT---TTTTCGACAA
ACCAATCCTCTCTTACTCCTTAAAAGCACTCATCGCCCCTTATGATTT-ACTCACTAATGTTCATTTACTCTGTATATGC
TGTTGAAGAGGGCCTACAAAAAAAATCTTGCCAAATATCACAGAATAATCCATGCACATCTGTCAGTTGGTGGCAGCCAC
CTTTCATTATTCATTTGATTTTTTA-ATCATTTTTTGATGTTGATGGCATTGCTTTGTGGTATAGCCTTGATACAAAGGT
AGCATGTCTTGAACTTGACTTTGTAGTTCCATTCCAAAAACATGATACCATATCCTGTGAAATTTTTATTTACTGAATAA
GATTATGCTTTTCTTCCGCTATACATACTCCTTTTTCTCCAAACCAGGATTGCTATACATATTCTGAGAG---TCAATGT
AATAATGCAGGCAAGGAGGGCACTACGAGCCTTGAGGGGCCTTGTTAGATTGAAGTCATTGGTCGAGGGTAATTCGGTTA
AGCGTCAAGCTGCAAGTACTCTGCGCTGTATGCAGACTCTCGCACGGGTGCAGTCACAGATACGTTCAAGAAGGCTGAAG
ATGTCTGAGGAGAACCAAGCCCTCCAGCGCCAGCTCCTGCTGAAACAAGAATTGGACAGTTTGAGGGTAGGCAAACCATC
TCAAAACCTTCATCAGTAAAAATATTGTGTGCGCCACTGTTGTCCACTCAACTCGCTAGGCATCTACTAGTTTTTGTTAT
TGCACGAAAGAATTTTGCTTGATGAGTACTCCAATTTCCAGAAGTATCGCTTTCTCTTTTGCTCCAAATCTCGCAGTCGT
GGGCAATTACATCTTTTAAGTGAGAGCATTAAGCATACTCTATTTTTTGAATGAATACCAGATGGGGGAGCACTGGGACG
ACACCACTCAATCCAAGGAGAAGATCGAAGCAAGTCTAATAAGCAGGCAAGAGGCTGCAATAAGAAGAGAGAGAGCGCTC
GCATACGCGTTTTCCCATCAGGTAGGCCTTCCCGATTCTTAAAAATAGATGCCAATCTTCGTTTCATCTCATTCGACTAT
GTCATTCTTAAAATGCTTGAAAATTTGCACTATGCAGTGGAAGAGCAGTTCAAGGTCCTCCAACCCAATGTTTGTAGACC
CAAACAACCCACACTGGGGCTGGAGCTGGCTGGAGCGCTGGATGGCAGCAAAGCCTTCTGAGGCCGGCCGCACTGGAACC
GGCAAGGAAAGCAACATTGACCAGGGATCAGTGAAGAGCACGAGTTTGAACCTTGGAGAGGGCGAGATCACTAAAGCCTT
CAACCGTAGGGGCTCCAAGCCAGACAAGTCGTCACCGACGACTCCAAAGCTGATCCGCCCAGCCTCCCGGCTGTCCCCTT
CCACACCCACTGCCAAAGTGACACCAATAGTTGTGAAGAAGAAACCTGCTACACCGAAGAACGGGATTTCACAGGTGGAT
GACGATGCAAGGAGCGTGCTCAGTGTGCAGTCCGAGCGACCAAGGCGGCACAGCATAGCCACCTCAACAGTGCGGGATGA
CGAGAGCCTCGCAAGCTCTCCATCAGTCCCAAGCTACATGGCTGCCACAAAATCTGCTAGGGCCAAGTCCCGCCTCCAGG
GGTCGCCACTGATCGATAGTGCAGAGACGACACCAGAGAAAGGAGGCTCTATTAGCGTTGGGTCAGCCAAGAAGAGGCTG
TCTTTCCCAGCTGGAGGGGTGCCCCCCTCGCCAATGAGGCGGCATTCTGGCCCTCCGAAGGTGGAGAGTGTGGTGAAGGA
CATCGCTGTGACACCGCAGCCAGAGGCCCTGGCGATCAGCGGTTGA----------------------------------
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--------------------------------------------------------------------------
>chr1A_1_TraesCS1A01G064100
AAAGAATGCCCAATAGCCAAAACACAGAAATGAAAGAAATATATGGAAACCAATAGGCACATAAAGAGAAGAAATGAGAG
TAAAAAAAATGTTGACTGAAGCTGAAAATAAAACATTTCAACTGAAAAATAGCAATTCTGTAGA------AGTATTTGCA
CCGACATTTCAGATCACTTGCCGCTAGTTATGGAAAAT-------------------------------------AAATT
AGCAATTCCGTGGGAGTATTTGCACCAGTATTTG-GAATCTCTTGCGGATAGTTTATCCCCATCCAGCCGAACAGCCGAT
CCTATCAACATTAAAGTGCATCCAAGAACACCCAAAA-----CACCCAAGCACCCAATCCCAAAACATAAAGAGCACCAA
GTGGAGATACCACTCCCACTCCAATCCCTTCCCTCTTCTGTATCCAAGCTGTCCAACCCCAAAGAGGGAG-----AGAGA
GAGCAT-----CCCAACAGGCACCAAGCAAGTGCACACGGACCATCCCTCACTCTCCCTCCCCTCACCACCCCAGCAGCT
ACCTCTCAGCTCCC-----CGCTGTGCCCTCCTGTCAGTCCTACCACCTCCAGGCTCCAGCCAGCCAGCTACAATTCCCA
GCTCCTCGCCCTCCAACCCCGCTCCACCACCTCCCACATGATGCCA----TCCCCGCAGATATACCCGCAGCAATGCAGC
TGTCCTC---TCACGCCAACCTGACACACCC----------TCCCATCC-----TTCCCGTTAGTTAGTTGCCGCTCGCC
ACCGCACCGCACCGC----------------AAGGGCACTCGCCCGCCCTGCCCGCCCTCCTCACCTTGCTTCCGCAGAA
AGATCCATTTGGTTGGACTGGCGGTGGTTCCCCTGCAGACTGCCTGCAGCGGTAAAGCCGCGCCCTTTTGTGTGTGCGCT
TGCCTTGCCGCCGCGGCATCCGTCCCGCCCCGCTCCGTGGATAACTAGTGATAGATCTGGGAGGCGCAGATCTGACTGAC
CGGCCGGTGTTCGTCCTCCTTCCTGTCGGTGAGTGTTTGTTGGCCAAGAATTTGTTGGGGCCATGGGGAAGAAGGGCAAG
TGGCTGGGCGCCGTCAAGAAGGTGTTCAGCCCTGAGTCCAAGGAGAAGAAGGAGGAGGTAATAATTAATTTGTGGC-GGT
GGCTCTTGCTTCGGG-TTCTCCTCTCTACTAATTTATTTATGG---AGTTCTTGTGCTGGATTTACTTAGATTTT-ACTG
TTAGCTGCTGTGAGCTTGCTGTGGGTCTGATCAGGATTTGGCTGTTTCCTCC---ATGAATTAATTGCAAACAGTTCAGC
TTATTGGTTCCTCTAGGGGATTTTTTT-AGGCAACAGAATCTTGAAATTGGCATATTGTTTTGC-----TCACGCCAGCA
ATTAATTGCAGAGATTTCTTACTA-----GTACTAGTTTTGATAGCCTGTCTATTCATGG----TGATGGTTTCAGTTGG
GCTGTCATGTTTGGACAA-CATCTTTTCATTTCTTACTTGCCATTCAGTAATAACTGTAATAAATAGGGGATACCATCTT
TCCACCTACAATTGGATTGTCCAGTAGTTAATTTC-ACATATCTGTGATAAAACTAGTATTGTCTTTGCGATTGTGTTAT
CATAGTACTGTAATTTGAACTGAATTGTGATGACAACCCAAGCTTTGCCTTTCAAATGTACAGAAACTGAGGAAGAAGTT
GGCTGCAAGAGACCCCAGTCCACCAGATCTAACACCTTCCACTTCCTTGGAAGTCAATGTTTCGATGCCGCCGCCGCTGC
CGCC------TCCCGCCGTTCCATCCCCGCACCAAACTGAGGAGGTTCAGGTCCGTGATGTTGAGCTGGAGCAGGAGCAG
GAGCAGAGCAAGCATGTGACCGTGGAGGCAGCCCCTGATGCTCCTGCGCAGACATCGTCGGCATTGCCACCTGGTGTATC
GAGGGAAGAGCTAGCAGCAATCAAGATCCAGACCGCCTTCAGGGGATACCTGGTAATTTGACATCAGCTCTTGAATTAGC
AATTTCATGCCATTTGGAATGTTTTGTGAGCTCATTGTGACAGTTGGGATACTTAAATGGCTGGTTTCATTCTAACTATG
TCATGAAATTTATAAAAATTAAAGATTAAACGTGCTTGCATGCAGTCTTTTATTTTCTGATGGCCGCTGATCCGGTCTTT
GCATTTTTTCAACTTTGGAAGAAAAACTCTTGTATTGTTTATGGATTATGTCGCTGTACGAACATGCCTGAACACGCAAG
CAAATCCCCATGGTGGCCTTCCTCAAAACTTTCTCTTATCCTCTTCTGAGGTTTAGGTATTATCAGCTCAACAACTTGGT
CAGTTGCTTTTAATTTGAATTGAGGCCTCTTGGTGAAATTTCTTAGCTACTTACAGTTCCTCTGTTCTGTTCACAAATTT
TGCATGGTAAATCAACTTTTATGGTTCAACAAGCCAGTATTCTTGCCTACCAGAATCCTCTGTTCTT---TTTTCGACAA
ACCAATCCTCTCTTACTCCTTAAAAGCACTCATCGCCCCTTATGATTT-ACTCACTAATGTTCATTTACTCTGTATATGC
TGTTGAAGAGGGCCTACAAAAAAAATCTTGCCAAATATCACAGAATAATCCATGCACATCTGTCAGTTGGTGGCAGCCAC
CTTTCATTATTCATTTGATTTTTTA-ATCATTTTTTGATGTTGATGGCATTGCTTTGTGGTATAGCCTTGATACAAAGGT
AGCATGTCTTGAACTTGACTTTGTAGTTCCATTCCAAAAACATGATACCATATCCTGTGAAATTTTTATTTACTGAATAA
GATTATGCTTTTCTTCCGCTATACATACTCCTTTTTCTCCAAACCAGGATTGCTATACATATTCTGAGAG---TCAATGT
AATAATGCAGGCAAGGAGGGCACTACGAGCCTTGAGGGGCCTTGTTAGATTGAAGTCATTGGTCGAGGGTAATTCGGTTA
AGCGTCAAGCTGCAAGTACTCTGCGCTGTATGCAGACTCTCGCACGGGTGCAGTCACAGATACGTTCAAGAAGGCTGAAG
ATGTCTGAGGAGAACCAAGCCCTCCAGCGCCAGCTCCTGCTGAAACAAGAATTGGACAGTTTGAGGGTAGGCAAACCATC
TCAAAACCTTCATCAGTAAAAATATTGTGTGCGCCACTGTTGTCCACTCAACTCGCTAGGCATCTACTAGTTTTTGTTAT
TGCACGAAAGAATTTTGCTTGATGAGTACTCCAATTTCCAGAAGTATCGCTTTCTCTTTTGCTCCAAATCTCGCAGTCGT
GGGCAATTACATCTTTTAAGTGAGAGCATTAAGCATACTCTATTTTTTGAATGAATACCAGATGGGGGAGCACTGGGACG
ACACCACTCAATCCAAGGAGAAGATCGAAGCAAGTCTAATAAGCAGGCAAGAGGCTGCAATAAGAAGAGAGAGAGCGCTC
GCATACGCGTTTTCCCATCAGGTAGGCCTTCCCGATTCTTAAAAATAGATGCCAATCTTCGTTTCATCTCATTCGACTAT
GTCATTCTTAAAATGCTTGAAAATTTGCACTATGCAGTGGAAGAGCAGTTCAAGGTCCTCCAACCCAATGTTTGTAGACC
CAAACAACCCACACTGGGGCTGGAGCTGGCTGGAGCGCTGGATGGCAGCAAAGCCTTCTGAGGCCGGCCGCACTGGAACC
GGCAAGGAAAGCAACATTGACCAGGGATCAGTGAAGAGCACGAGTTTGAACCTTGGAGAGGGCGAGATCACTAAAGCCTT
CAACCGTAGGGGCTCCAAGCCAGACAAGTCGTCACCGACGACTCCAAAGCTGATCCGCCCAGCCTCCCGGCTGTCCCCTT
CCACACCCACTGCCAAAGTGACACCAATAGTTGTGAAGAAGAAACCTGCTACACCGAAGAACGGGATTTCACAGGTGGAT
GACGATGCAAGGAGCGTGCTCAGTGTGCAGTCCGAGCGACCAAGGCGGCACAGCATAGCCACCTCAACAGTGCGGGATGA
CGAGAGCCTCGCAAGCTCTCCATCAGTCCCAAGCTACATGGCTGCCACAAAATCTGCTAGGGCCAAGTCCCGCCTCCAGG
GGTCGCCACTGATCGATAGTGCAGAGACGACACCAGAGAAAGGAGGCTCTATTAGCGTTGGGTCAGCCAAGAAGAGGCTG
TCTTTCCCAGCTGGAGGGGTGCCCCCCTCGCCAATGAGGCGGCATTCTGGCCCTCCGAAGGTGGAGAGTGTGGTGAAGGA
CATCGCTGTGACACCGCAGCCAGAGGCCCTGGCGATCAGCGGTTGAGACAAACAAGCAACTCATACAAGTGGAGACGGGA
CTATGGA---TTATGCAGATACACATATTTCACCCATGAAAAAAAGGTC--AAAGTTCTTCGAATTGTTGCATTTTGTTT
TCATCCAATTATTATTGTGACTACATTGTCGGCTTCATTAGGG-AAGACTCTCGGTGTCGTCTGTCGGTCCATTCCATTT
GTTGCTTG----TGTAAAACCATATGGGGTTTGCTCTTTGTATGTACACAGGTCTTCTATTTATGCGAGCAATATATTTC
TTCCATGCCTTTACG--ATGGTCCCAAATTCCCAATGAACTTGTTAATGTCAATGTAGCACTCTGCCCCAATAAGTACCC
TATTTTTAA--------TGTCTACACAAAAGCATATCAAA-TTAGTGGTTTTGTTCACTGGGTTACGCATGTACAAA--A
AAAAACGATGGTTGGTGGTGGCCATGCTCTCACCATGGTTGGTGTCGGCCATGGTA-----------GCGACCTCTAATC
ATGTTGCCTTTCTTATTACGGCAATTGCCCAGCATCCAGTTGAAATTTTTTTATCTTATATTA-----------------
--------------------------------------------------------------------------------
--------------------TTCAGAAGTGCATTTCAAAGTGTCGAAGACATTCTCCCTTATCTTTTCTTTTTTGCTGAG
GAAAAAAGATGAGGGAGAATGTCTTCGACGCTTCCAAATGC---ACTTTTGAAATAATATGATATTCTTGCTTATCTATG
TGGAAATACACTGTAATTATGCAAACTTTCCTGCAAAATTCTGTTCATTGGGGCCTGCACAAAAGTA---TGAAAAGGTT
GTCCAGTAAGAACCATTTTTGCCTTAATTTTGTTCTCTGCAGATGAACCCGAAACTGGTGTCAGAATGACAATACTACCA
TTGAGCTCGGTTAATT----------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AGTAAATACAGTCAAGGTTCAAGCCAAAACATGGC-ATGTTTCACACCTTATC
AGGTCCAT-----------------------------------------------------------GACAGTAACAGCC
AAGACATCCAAGCACAGTTCCATCACTAATCATGGCAATTGATCAAGCATTCATGGTCGAAGCACATTGCACAA
>chr1B_1
AAAAAATGCCCATTAGCCAAACTAATGAGATGAAAAATA-ATATGAAAACTAATAGGCACATAAAGAGAAGAACCGAGAG
CCAGAAATATGTTGACTGGAGCTGAAAATAAAACAATTCGACTGAAAAAATCGCAATACCTTGGAAGTAGAGTATTTGCA
CCGACATTTCAGATCACTCAGCTGCTAGTTATTGGGAAAATTGATTTAACCTGCAAATAAAAGCCGTTGGACTGGAAAAT
AGCAATTCCGTGGAAGTATTTGCACCGGTGTTTTCGAGTCTCTTGCGGCTGGTTTATCCCCGTCCGGCTGAACAACCGAT
CCCATCCACATTAAAGTGCATCCAAGAATACCCAAAAACACCCACCCAAGCACCCAATCCCAAAACATAAACAACACCAA
GTGGAGATTCCACTTCCAATTCAATTCGTTTCCTCTTCTGTATCCAAGCTGTCCAGCCCCAAAGAGGGAG-----AGAG-
-AGCAT-----CCCAACAGACACCAAGCAAGTGCACACGGACCATCCCTCA---------CTCTCACCACTCCAGCAGCT
ACCTCTCAGCGCCGCGCTGTGCTGTGCCCTCCTGTCAGTCCTACCACCTCCAG-------CCAGCCAGCTACAACTCCCG
GCTCCTC-CCCTCCAACCCTGCTCCACCACCTCCCACATGATGCCATCCTTCCCCGCAGATATACCCGCAGCAATTCAGC
TGTCCTC---TCACGCCAACCTGACACACCT----------TCCCATCCCTTCCTTCCCGTTAGTTAGTTGCCGCTCGCC
ACCGCACCCCACCG-----CACCGCAAGAGGAAGGGCATTCGCTCGCCCTGCCCGCCCTCCTCACCTTGCTTCCGCAGAA
AGATCCATTTGGTTGGACTGGCGGTGCTTCCCCTGCAGACCGCCTGCAGTGGTAAAGCCGCGCCCTTTTCTCTGTGCGCT
TGCCTTGTCGCCGCGGCATCCGTCCCGTCCCGTCCCGTGC----------ATAGATCTGGGAGGCGCAGATCTATCTAAC
A----GGTGTTCCTTCTCCTTCCCGTCGGTGAGTGTTTGTAGGGAGAGAATTTGTTGGGGCCATGGGAAAGAAGGGCAAG
TGGCTGGGCGCCGTCAAGAAGGTGTTCAGCCCTGAGTCCAAGGAGAAGAAGGAGGAGGTAATAATTAATTAATTTGTGGC
GGCTCTTGCTTTGGTGTTCTTCCCTCTTATTACTTATTTATGG---AGTTCTTGTGCTGGATTTCCTTAGATTTTTACTG
CTAGCTGCTGTGAGCTTGCTGTGGGTCTCATCAGGATTTGGCTGTTTCCTCA---ATGAATTAATTGCAAACGCTTCAGT
TTATTGGTTCCTCTAGGGGATTTTTTTCAGGCAGCAGAATCTTGAATTTGGCATGTTGTTTTG-----TTCACGCCAGCA
ATTTATTGCAGAGATTTCTTTTACCAGTACTACTAGTTTTGATAGCCTGTCCACTCATGGTGATTGATGGTTTCAGTTGG
GCTGTCATGTTTGGACAG-CATCTTTTCATTTCTTACTTGCCACTCAATAATAACCGTAATAAATAGGGGACACCATCTT
TCCAT-TACAATTGAATTGTCCAGTAGTTAATTTAAACATATCTGTGATAAAACT---ACTGTCTTTGCGATTGTGTTAT
CATAGTACTGTAATTTGAACTGAATTCTGATGACAACCCAAACTTTGCCTTTCAAATGCACAGAAACTGAGGAAGAAATT
GGCTGCAAGAGACCCCAGTCCACCAGATCTAACACCTTCTACTTCCTTGGAAGTCAATGTTTCGATGCCGCCGCCGC---
---CGCCGCCTCCCGCAGTTCCTTCTCCACACCAAACCGAGGAGGTTCAGGTCCGGGATGTTGAGCTGGAGCAGGAGCAG
GAGCAGAGCAAGCATGTGACCGTGGAGGCAGTTCCTGATGCTCCTGTGCAGACGTCGACGGCATTGCCACCTGGTGTATC
TAGGGAAGAGCTCGCTGCAATCAAGATCCAGACCGCCTTTAGGGGATACCTGGTAATTCGACATCAGCTCTTGAATTAGC
AATTTCATGCCATTTGGAATGTTTTGTGAGCTCATTGTGACAGTTGGAATACTTAAATGGCTGCTTTCATTCTAACTATG
TCATGAAATTTATAAAAATTAAAGATTAAACGTGCTTGCGTGCAGTGTTTTATTTTCTGATGGCCGCTGATCCGGTCTTT
GCATTTTTTCAACTTTGGAAGAAAAACTCTTGTATTGTTTATGGATTATGTCTCTGTACGAACATGCCTGAACATGCAAG
CAAATCCCTGTGGTAGCCTTCCTCAAAACTTTATCTTATCCTCTTCTGAGGTTTAGGTATTATCAGCTCAACAACTTGGT
CAGTTGCTTTTAATTTGAATTGAAGCCTCTTGGTG-AATTTCTTAGCTACTTACAGTTCCTCTGTTCTGTTCACAAATTT
TGCATGGTAAATCAACTTATATGGTTCAACAAGCCAGTATTCTTGCGTACCAGAATCCTCTGTTCTTCTTTTTTCAACAA
ACCAATCCTCTCTTACTCCTTAAAAGCACTCATCGCCCCTTATGATTT-ACTCACTAATGTTCATTTACTCTGTATATGC
TGTTGAAGAGGGCCTAC-AAAAAAATCTTGCCAAATATCACAGAATAATCCATGCACATCTGTCAGTTGGTGGCAGCCAC
CTTTCAATATTCATTTGATTTTTTA-ATCATTTTTTGATGTTGATGGCATTGCTTTGTGGTATAGCCTTGATACAAAGGT
AGCATGTCTTGAACTTGACTTTGTAGTTCCATTCCAAAAACACGATACCATATCCTGTGGATTTTTTATTTACTGAATAA
GATTATGTTTTTCTTCCGCTATACATATTCCTTTTTCTCCGAACCAGGATTGCTATACATATTCTGAGAG---TCATTGT
AATAATGCAGGCAAGGAGGGCACTACGAGCCTTGAGGGGCCTTGTTAGATTGAAGTCATTGGTCGAGGGTAATTCGGTTA
AGCGTCAAGCTGCAAGTACTCTGCGCTGTATGCAGACTCTCGCACGGGTGCAGTCACAGATACGTTCAAGAAGGCTGAAG
ATGTCTGAGGAGAACCAAGCCCTCCAGCGCCAGCTCCTGCTGAAACAGGAGTTGGACAGTTTGAGGGTAGGCAAACCATC
TCAAAGCCTTCATTAGTAAAAATATTGTGTGTGCCACTGTTGTCCACTCAACTGGCTAGGCATCGACTAGTTTTTGTCAT
TGCACGAAAGAATTTTGCTTGACGAGTACTCCAATTTCCAGAAGTATCGCTTTCTCTTTTGCTCCAAATCTCGCAGTTGC
GGGTAATTACATCTTTTAAGTGAGAGCATTAAGCATACTCTGTTTTTTGAATT-ATACCAGATGGGGGAGCACTGGGACG
ACACCACTCAATCCAAGGAGAAGATCGAAGCAAGTCTAATAAGCAGGCAAGAGGCTGCGATAAGAAGAGAGAGAGCTCTC
GCATATGCGTTTTCCCATCAGGTAGGCCTTCCCGACTCTTAAAAATAGATGCCAATCTTCGTTCCATCTCATTCGACTAT
GTCATTCTTAAAATGCTTGAAAATTTGCACTATGCAGTGGAAGAGCAGTTCAAGGTCCTCCAACCCAATGTTTGTAGACC
CAAACAACCCACACTGGGGCTGGAGCTGGCTGGAACGCTGGATGGCAGCAAAGCCTTCTGAGGCCGGCCGCACTGGAACC
GGCAAGGAAAGCAACATTGACCAGGGATCAGTGAAGAGCACGAGTTTGAACCTTGGAGAGGGCGAGATCACTAAAGCCTT
CAACCGTAGGGGCTCCAAGCCAGACAAGTCGTCACCGACGACTCCAAAGCTGACCCGCCCAGCGTCCCGGCTATCCCCTT
CTACACCCACTGCCAAAGTGACACCAATAGTTGTGAAGAAGAAATCTGCTACACCGAAGAACGGGATTTCACAGGTGGAT
GACGATGCAAGGAGCGTGCTCAGTGTGCAGTCCGAGCGACCAAGGAGGCACAGCATAGCCACCTCAACGGTGCAGGATGA
CGAGAGCCTCGCAAGCTCTCCATCAGTCCCAAGCTACATGGCTGCCACAAAATCTGCTAGGGCCAAGTCCCGCCTCCAGG
GGTCACCACTGATCGATAGTGCAGAGACGACACCAGAGAAAGGAGGCTCTGTTAGTGTTGGGTCAGCCAAGAAGAGGCTG
TCCTTCCCAGCTGGAGGGGTTCCCCCCTCGCCAATGAGGCGGCATTCTGGCCCTCCAAAGGTGGAGAGCATGGTGAAGGA
CATCCCCGAGACGCCGCAGCCAGAGGCCCTGGCGATCAGCGGTTGAAACAAACAAGCAACTCATACAAGTGGAGACGGGA
CTATGGATTATTATGCAGATATACACATTCCACCCATGAAAAAAAAGGTTAAAAGTTCTTCGAATTGTTGCATTTTGTTT
TCATCCAATTATTATCGTGACTACATTGTCGTCTTCATTAGGGGAAGACTCTCGGTGTCGTCTGTTGGTCCATTTCATTT
GTTGCTTG----TGCAAAACCATATGGGGTTTGTTGTTTGTATGTACACAGGTCTTCTATTTATGCGAGCAATATATTTC
TTCCATGCCTTCTATTTATGGTCCCAAATTCCCAATGAACTTGT------CAATGTAGCACTCTGCCCCAACAAGCATCC
TATCTTTAATGTCTAGTTGTCTACACAAAAGCATATCAAAC-TAGTGGTTTTGTTCGCTGGGTTACGCATGTACAAATAA
AAAAACAATGGTTTGTGGTGGCCATGCTCTCACCATGGTTGGTGTCGGCCATGGCA-----------GCTACCTCTAATC
ATGTTGCCTTTCTTATTACGGCAATTGCCCAGCATCCAGTTGAAAAC-TTTTATCTCATACTCCCTCAGTCCGGAATTAC
TTATTGCAGCAATGGATAAAAATAGATGTATTTAAAATTAGAATATGTCTATATACATTTATTTCTCCTACAAGTATTTC
GGGACGGAGGGAGTATATTCTTCAAAAGTGTATTTGGAAGTGTCGAAGACCTTCTCCCTTACCTTTTTA-----------
-----------AGGGAGAATGTCTTCGACACTTCTACATGCACTACTTTTAAAATAATATGATATTCTCCCTTATCTATG
TGGAAATACACTGTAATTATGCAAACTTTCTTTTAAAAAAATTCATT---GGGCCTGCACAAAAGTAAAATCAAAA-GTT
GTCCAGAAAGAATCATTTTTGCCTTAATTTTGTTCTCCGCAAAT--ACCCAAAACTGGTGGCAGAACAACAATACTACCG
TTGAGCTCAGTTAATTAGTACTCCCTCCAGATGCTGGGCAATTGCCGTAATAAGAATGGCAACATGATTAGAGGTGCGCA
CGCACCCATGTCCACCTTTGTATTTTCGCTCCCTCCGTTACTAAATATAAATCCTTTTAGAGACTAAATATAAATCCTTT
TAGAGATTTCACTGTAGAAACACAGGGAGTACATAGAGTCAAGGTTCAAGCTAAAACGGGCATATGTTTCACAACTTATC
AGGTC-ATGACAAGCCTCAGAAACATACTCATATTTCCACTTAAACAACTAACAGCTGTTTTAGATAGACAGTGACAGTC
AAGACATCCAAGCACAGTTCCATCACTGATCATGGCAATTGATCAAGCATTCATGGCTGAAGCACA--------
>chr1D_193
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------AAAAT
AGCAATCCCGTGAAAGTATTTGCACCCGTATTTTTGAATCTCTTGCGGCTAGTTTATCCCCATCCAGCCGAACAGCCGAT
CCTATCAACATTAAAGTGCATCCAAGAATACCCAAAAGCACCC----AAGCACTCAACCCCAAAACATAAACAACACCAA
GTGGAGATTCCACTTTCACTTCAATTCGTTTCCTCTTCTGTATCCAAGCTGTCCAACCCCAAACCCACAACCCAAAGAGA
GAGCATCCCATCCCAACAGACACCAAGCAAGTGCACACGGACCATCCCTCA---------CCCTCACCACTCCAGCAGCT
CCCTCTCAGCGCCGCGCTGCGCTGTGCCCTCCTGTCAGTCCTACCGCCAC----CTCCAGCCAGCTAG-TACAATTCCCA
GCT------CCTCCAACCCCGCTCCACCACCTCCCACATGATGCCA----TCCCCGCAGATATACCCGCAGCAATTCAGC
TGTCCTCCTCTCACGCCAACCTGACACACCTCCCCTTCCCATCCCTTCCCTTCCTTCCCGTTAGTTAGTTGCCGCTCGCC
ACCGCACCGCACCGCACCGCACCGCAAGAGGAAGGGCACTC---------GCCCGCCCTCCTCACCTTGCTTCCGCAGAA
AGATCCATTTGGTTGGACTGGCGGTGGCTCCCCTGCACACCGC----AGTGGTAAAGTCGCGCCCTTTTGTGTGTGCGCT
TGCCTTGCCGCCGCGGCATCCGTCCCGCCCC-----GTGGATAACTAGTGATAGATCTGGGAGGCGCAGATCTGACCGGT
GGTATTCTCCTTC----CCGTCCCGTCGGCGAGTGTTTGCTGGGAGAAAATTTGTTGGGGCCATGGGGAAGAAGGGCAAG
TGGCTGGGCGCCGTCAAGAAGGTGTTCAGCCCTGAGTCCAAGGAGAAGAAGGAGGAGGTAATAATTAATTTGTGGTAA--
--CTCTTGCTTGGGA-TTCTTCTCTCTTATTACTTATTTATTATGCAGTTCTTGTGCTGGATTTCCTTAGATTTT-ACTG
CTAGCTCTTGTGAGCCTGCTGTGGGTCTAATCAGGATTTGGCTGTTTCCTCCATGATGAATTAATTGCAAACAGT-CAGC
TTATTGGGAA-------------TTTTTAGGCGGCAGAATCTTGAAATTGGCATATTGTTTTGTTCACTTCACGCCAGCA
ATTTATTGCAGAGATTTCTTACTA---TAGTACTAGTTCTGATAGCCTGTCCACTCATGGTGATTGATGGTTTCAGTTGG
GCTGTCATGTTTGGACAAACATCTTTTCATTTCTTACTTGCCATTCAGTAATAACTGTAATAAATAGGGGACACCATCTT
TCCACCTACAATTGGATTGTCCAGTAATTAATT------------TGACAAAACT---ATTGTCTTTGCGATTGTGTTAT
CATAGTACTGTAATTTGAACTGAATTCTGATGACAACCCAAGCTTTGCCTTTCAAATGCACAGAAACTGAGGAAGAAATT
GGCTGCAAGAGACCCCAGTCCACCAGATCTAACACCTTCTACTTCCTTGGAAGTCAATGTTTCGATGCCGCCGCCGC---
---C------TCCCGCCGTTCCTTCTCCGCACCAAACTGAGGAGGTTCAGGTCCGTGATGTTGAGCTGGAGCAGGAGCAG
GAGCAGAGCAAGCATGTGACCGTGGAGGCAGCCCCTGATGCTCCTGCGCAGACGTCGGCGGCATTGCCACCTGGTGTATC
GAGGGAAGAGCTCGCGGCAATCAAGATCCAGACCGCCTTCAGGGGATACCTGGTAATTTGACATTAGCTCTTGAATTAGC
AATTTCATGCCATTTGGAATGTTTTGTGAGGTCATTGTGACAGTTGGAATACTTAAATGGCTGGTTTCATTCTAACTATG
TCATGAAATTTATAAAAATTAAAGATTAAACGTGTTTGCATGCAGTGTTTTATTTTCTGATGGCCGCTGATCCGGTCTTT
GCATTTTTTCAACTTTGGAAGAAAAACTCCTGTATTGTTTATGGATTATGTCTCTGTCCGAACATGCCTGAACATGCAAG
CAAATGTCTGCGGTGGCCTTCCTCAAAACTTTCTCTTACCCTCTTCTGAGGTTTAGGTATTATCAGCTCAACAACTTGGT
CAGTTGCTTTTAATTTGAATTGAGACCTCTTGGTGAAAT-TCTTAGCTACTTACAGTTCTTCTGTTCTGTTCACAAATTT
TGCATGGTAAATCAACTTTTATGGTTCAACAAGCCAGTATTCTTGCCTACCAGAATCCTCTGTTCTTCTGTTTTCGACAA
ACCAATCCTCTCTTACTCCTTAAAAGCACTCATCACCCCTTATGATTTAACTCACTAATGTTCATTTACTCTGTATATGA
TGTTGAAGAGGGCCTAC-AAAAAGATCTT---------CACAGACTAATCCATGCACATCTGTCAGTTGGTGGCAGCCAC
CTTTCATTATTCATTTGATTTTTTTTATCATTTTTTGATGTTGATGGCATTGCTTTGTGGTATAGCCTTGATACAAAGGT
AGCATGTCTTCAACTTGACTTTGTAGTTCCATTCCAAAAACACGATACCATATCCAGTGAAATTTTTATTTACTGAATAA
GATTATGTTTTTCTTCCGCTATACATATTCCTTTTTCTCCGAACCAGGATTGCTATACATATTTTGAGAGTCATCATTGT
AATAATGCAGGCAAGGAGGGCACTACGAGCCTTGAGGGGCCTTGTTAGATTGAAGTCATTGGTCGAGGGTAATTCGGTCA
AGCGTCAAGCTGCTAGTACTCTGCGCTGTATGCAGACTCTCGCACGGGTGCAGTCACAGATACGTTCAAGAAGGCTGAAG
ATGTCTGAGGAGAACCAGGCCCTCCAGCGCCAGCTCCTGCTGAAACAAGAATTGGACAGTTTGAGGGTAGGCAAACCATC
TCAAAGCCTTCATCAGTAAAAATATTGTGTGCGCCACTGTTGTCCACTCAACTCGCTAGGCATCTACTAGTTTTTGTTAT
TGCACGAAAGAATTTTGCTTGATGAGTACTCCAATTTCCAGAAGCATCGCTTTCTGTTTTGCTCCAAATCTCGCAGTCGC
GGGTAATTACATCTTTTAAGTGAGAGCATTAAGCATACTCTGTTTTTTGAATT-ATACCAGATGGGGGAGCACTGGGACG
ACACCACTCAATCCAAGGAGAAGATCGAAGCAAGTCTGATAAGCAGGCAAGAGGCTGCGATAAGAAGAGAGAGAGCGCTC
GCATACGCGTTTTCCCATCAGGTAGGCCTTCCCGATTCTTGAAAATAGATGCCAATCTTCGTTTCATCTCATTCGACTAT
GTC--TCTTAAAATGCTTGGAAATTTGCACTATGCAGTGGAAGAGCAGTTCAAGGTCCTCCAACCCAATGTTTGTAGACC
CAAACAACCCACACTGGGGCTGGAGCTGGCTGGAACGCTGGATGGCAGCAAAGCCTTCTGAGGCCGGCCGCACTGGAACC
GGCAAGGAAAGCAACATTGACCAGGGATCAGTGAAGAGCACGAGTTTGAACCTTGGAGAGGGTGAGATCACTAAAGCCTT
CAACCGTAGGGGCTCCAAGCCAGACAAGTCGTCACCAACGACTCCAAAGCTGACCCGCCCAGCTTCCCGGCTATCCCCTT
GTACACCCACTGCCAAAGTGACACCAATAGTTGTGAAGAAGAAATCTGCTACTCCGAAGAACGGGATTTCACAGGTGGAT
GACGATGCAAGGAGCGTGCTCAGTGTGCAGTCTGAGCGACCAAGGCGGCACAGCATAGCCACCTCAACGGTGCGGGATGA
CGAGAGCCTCGCAAGCTCTCTGTCAGTCCCAAGCTACATGGCTGCCACAAAATCTGCTAGGGCCAAGTCCCGCCTCCAGG
GGTCACCACTGATCGATAGTGCAGAGACGACACCAGAGAAAGGAGGCTCTGTTAGTGTTGGGTCAGCCAAGAAGAGGCTG
TCCTTCCCAGCTGGAGGGGTGCCCCCCTCGCCAATGAGGCGGCATTCTGGCCCTCCAAAGGTGGAGAGCATGGTGAAGGA
CATCCCCGAGGCGCCGCAGCCAGAGGCCCTGGCGATCAGCGGTTGAGACAAACAAGCAACTCATGCAAGTGGGGACGGGA
CTATGGATTATGCAGAT-ATATACACATTTCACCCATGAAAAAAAGGTT--AAAGTTCTTCGAATTGTTGCATTTTGTTT
TCATCCAATTATTATTGCGACTACATTGTCGGCTTCATTAGGGGAAGACTCTCGGTGTCGTCTGTCTGTCCATTTCATTT
GTTGCTTGCTTGTGTAAAACCATATGGGGTTTGTTGTTTGTATGTACACAGGTCTTCTATTTATGCGAGCAATATATTTC
TTCCATGCATGCC---------------TTCCCAATGAACTTGTCAATGTGAATGTAGCACTCTGCCCCAATAAGTATCC
TATCTTTAC--------TATCTACACAAAAGCATATCAAATTTAGTGGTTTTGTTCACTGGGTTACGCATGTACAAA-AA
AAAAACAATGGTTGGTGGTGGCCATGCTCTCGCCATGGTTGCTGTCGGCCATGGTAGCTGACTAGCTGCTACCTCTAATC
ATGTTGCCTTTCTTATTACGGCAATTGCCCAGCATTCAGTTGACAAC-TTTTATCTCATATTAT----------------
--------------------------------------------------------------------------------
--------------------TTCAAGAGTGCAATTGGAAGTGCCGAAGACATTCTCCCTTATCTTTTTTTCGGTGGAAAA
AA------------------------------------------------GAAATAATACGATA-TCTCCCTTATCTATG
TGGAAATACACTGTAATTATGCAAA------------ATTTTGTTCATTGGGACCTGCACAAAAGTAAAATGAAAAGGTT
GTCTAGTAAGAACCATTTTTGCCTTAATTTTGTTCTCCGCAAAT--ACCTGAAACTGGTGTCAGAACGACAATACTACCG
TA-AGCTCAGTTAATT----------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AGTAAATAGAGTCAAGGTTGAAGCCAAAACATGGC-ATGTTTCACACCTTATC
AGGTCCATGACAAGCCTCAGAAACATACTCTCCACTT--CTTAAACAACTAACACCAGTTTTAGATAGACAGTAACAGCC
AACACATCCAAGCACAGTTCCATCACTAATCATGGCAATTGATCAAACATTCATGGCCGAAGCACA--------
>SNPs
---S--------S--------SS-SS--S------S-S-S-----S----S----------------------SS-----
SS-S---S----------S----------------S---S---------SSSSS-S-SSS-S-S----------------
------------------SSS-SSSSSS-SSSSSSS-S----------------------------------------S-
-------------S------------S------S--------------S-------------------------------
----------------------------S------------------------------------------S-S------
--------S-----S-----S----S-S--S-------------------------------------------------
-------------------S-------------------------------SSSSSSSSS----------S---------
----------S--S---------------------------------------S--------------------------
-------S-------------------------------------------------------------------S----
------------------------------S-------------------------------------------------
-------------------------------------------S------------------------------------
----------------------------------------S--------S------------------------------
--------------------------------SS----------------------------------------------
S-SSS-------S-S--------S-------------------SSS----------------------------------
---------------------------------------------------------------------------S---S
-----------S--S-----S------SS-S-S-------------------------------S---------------
S---------------------------S---------------------------------------------------
---------------------------------S-----------------------------S----------------
---S-----------------------------------------------S-S--------------------------
-----------------------------------------------------------------------S--------
----------------------------------S--------------------SSS----------------------
--------------------------S-------------------------------S------------------S--
---------------------------------------S-------------------------------------SSS
SSS-------------------S--S------------------------------------------------------
-----------------------------------------------------S---S----------------------
------------S--S----------------------------------------------------------------
-----------------------------------------------S--------------------------------
----------------------------------------------S---------------------------------
----------------------------------------------------S---------------------S-----
--------SS----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
-------S-------------------S------------S-----------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
-------------------------------------------------------------------------------S
---S-------------------------------------S----------SS--------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S---------S--------S-------
-S------------------------------------------S-----------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
----S---------------------------------------------S----S------------------------
--S-----------------------------------------------------S-----------SS----------
----S-S-S---S-------------------------------------------------------------------
---------------------S---S----------------------S-------------------------------
--------------------------------------------------------------------------S-----
---------------------------------S-S--------------------------------------------
-----------SSSS-----------------------------S--------------------------------S--
---S----------------------------------------------------------------------------
------S--------------------------------------------------------------S----------
---------------------------------------------SSS--------S-----------------------
--------------------------------------------------------------------------------
------------------------S----------SS------------------------------S--SSS--SSS-S
S-SSSSSSSSS------------------S----S-S-------------------------------SS----------
------------------------------S-SS------S---------------------------------------
-------------------------------------S---S--SS--------------------S------------S
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S---------SSSSSSSS
>forward_1084
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------------------------GTCGGTGAGTGTTTGTTGGC------------------------------------
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>reverse_2293
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----------------------------------------------------GCTGTACGAACATGCCTGAAC-------
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>forward_2207
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---------------------------AAACGTGCTTGCATGCAGTC---------------------------------
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>reverse_3414
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-----------------------------------------------------AATACCAGATGGGGGAGCAC-------
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>forward_2658
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------------------------------------------------------------------------------GC
TGTTGAAGAGGGCCTACA--------------------------------------------------------------
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>reverse_4309
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--------------------------------------------------------------------TGTGGTGAAGGA
CATCGCTG------------------------------------------------------------------------
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>forward_3894
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----------------------------------CCGACGACTCCAAAGCTGAT--------------------------
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>reverse_5326
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---------------------------------------------AACCCGAAACTGGTGTCAGA---------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------
