>input_sequence_22586
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----------------ATGGTGCTGGATCTCAATGTGGAGTCGCCGGCGGACTCGGGCACGTCCAGCTCCTCCGTGCTCA
ACTCCGCGGACGCCGGTGGCGGCGGC---TTCCGGTTCGGCCTGCTCGGGAGCCCTGATGATGACGACTGCTCCGGCGAG
CCGGCGCCGGTCGGGCCCGGGTTCGTCACGAGGCAGCTCTTCCCCGCGTCGCCGCCCGGGCACGCGGGCGCGCCCGGGGT
GACGATGGGGCAGCAGGCCCCGGCGCCTGCGCCGATGGCGCCCGTGTGGCAGCCGCGGCGCGCCGAGGAGCTCCTCGTGG
CGCAGCGGATGGCGCCCGCGAAGAAGACGCGGCGGGGCCCGAGGTCGCGCAGCTCGCAGTACAGGGGCGTCACCTTCTAC
CGCAGGACCGGCCGGTGGGAGTCGCACATCTGGTCAGCCCTCCTCTCGTCTCCCTACTCCTCCTCCATGACTATAGTTAT
TACCCAAATCACTAATCAATCGCTGGCCTTTGTCCGTCTGATTCCACCAGGGATTGCGGGAAGCAGGTCTACTTGGGTGA
GCTCAAACAAATCCCAGCTCGAGCTCCGATCTCCTCGGTGTCTAATTTCGATTATCTTAGCTGTATGGGCTCGTGATTAA
CACTGGATAATTTCTTCAGGTGGTTTCGACACTGCGCACGCGGCCGCAAGGTGAACTAATTAATTAACCAGGCCTCGTTT
GAATTCCTTTTGCCCCGATTTGGCCACGAACTGTGTACTGAGATGAGACGGTGTGGCGTGGCGCAGGGCCTACGATCGCG
CGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTGAGCGACTACGAGGAGGATTTGAAGCAGGTAATC
TTATCCAAGCCTAGTTGATTGC------------TGTACTACCAAGTAGTGCGCCGGATACATATGTATCGGTGGTTTGT
CCGATGGTTGATATCTGGTGGGTGGTGGTGGTGTTTTTTGCCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATC
CTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGA
GGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTAAGCAGGCACACACACAGCTCACGCACTAAAATTAATTCACTTCGCCC
ACATTATCATAGTAGTAGTTTCTTTTATCAAATGCCATTG-----ACAAGATTCAGTTGAAATGAAATTTCACAGACTGC
TCATGAACTTGACACTAATTAGTAGTAGATGTGACAGGGCAGCTGTTCATGCTGTGGACGTTTAATTAGCCTGTCGCAGG
TAATCATCTTAGATTACCCC-TTTTGAAACATAATCTTAGCTGGTTTAGGGTAGGGTCATCAAGTTAATCCATGTTGTTA
GTTGTTGGCGCGTCCTGTGTTGGTGCTGGTGAGACGTCCACTTCCCCCGACACGACACTC-GATTGCAGACATCTATTTG
GAGCAACTGTTAGGCTCCACATAAGTATATGATCGAGTCGTCCAGACAAAATTAGTCTAATCCAATCCGTGCACATTATG
GTCCAGACCCAGAATTGTCACCCTACACCTTCACACCCCTATCTCCGTTGAGCTGTGGTCTCATCTCATATACCTGATAC
CCACATTATCATCACACGCGCAGGTACATATATCTGGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGTACTTTGATTT
GCGCTGATCATTAACATTTGG--GCTCACAAAACTTCCTTAATCTTTGCTCACTCACTCTAGTGTCATGTTGGATTTGGT
AGGGCGTACGACAGGGCGGCGATTCGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGA
TGCTCCACCCGACGCCGAAAATGAGGGTACTACT--ACAATCGGTCTCACCTGTCGAATTTCTCCAATCACACCC-AAGT
CTTATCTCATCGATATCGTTGTTGTTTTCTTAGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTGCGGATGTCGCAA
CCCACCGCGCACGATCCCAAGAGGGACAACATCATCGCCGGCCTTCAGTTAACTTTTGATTCCCCTGAATCGTCAACCAC
AATGATCTCTTCTCAGGTAAAGAAACAA----AATTATGTTTAGCACTAGCTAATTCAGTGGTTAGATTTGCTCAAATAG
AAAATTTGCTGTTGGCCCAGTTGTGTCGGTGGATGAGATATTATTGATCCAGGTCGTATGGCATATACTCTGTCCTAAAC
TTACGATATTTGTGCCTTT-TGATATCGCTGTAGCCAATGAGCTCATCTTCGTCCCAGTGGCCTGTGCATCAACATGGCA
CGGCAGTAGCACCTCAGCAGCACCAGCGTTTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTATCATCA
TCACTACGAGAACGACCAC-----CTCCTCCTCCTCCTCCTCCTCTGCTTGGTGCGCTGCTCCACCAGCTTACTGAAACT
GTTGCTACCACTGAATAATGTTTCTGAAGAAACTGCTAATAACATTTTCAGTTTTCGACAAGTTCGTTCCTGAAATTAAG
GTTTCCATGCTTCTTTCC----TAAAACTAATCACGCCTGCTCTCCTAAAACATCTACAG-GTGCAAGAATTTTGGGTGT
AGTGATGTGTCTGTTGACTGA-----------------------------------------GCATCTCGTCTCATGGAC
AGACAGAGCATGCTGTGTGGTAGTACCAGAGTACTTACTAGATGTGGGCACTACTGTTTGCCCTGTGAGCTC--------
-----------------GCACCACCTTTC-GAAAAAAACTGCAGTGCGCCCTCCGGTTCTTGCAGTTCCATCCGTCCCCC
ATGGCACAGCTTTAGATGCA------------------------------------------------------------
-----------------------------------------------------------------GCAGCAGCTTGCTTA
GTT---GTAGTACCCTGATCACATGGCGCAGCTTTATTCTTGGTAGCCACTGTGCATTCACATGAAAGCAAAGCTTTG--
-GTGCATGCACGGCCATGACTTGACGCTCTATCTCACTGCTGG-----TGCTGGTGCAGGTGCAGGTGCAGGAGAGGCCC
ATGGAGGCAAGGCCCCCTGAGCAGCCGTCGTCCTTCCCCGGCTGGGGGTGGCAAGCGCAAGCCATGCCGCCGGGCTCCTC
CCACTCGCCGTTGCTTTACGCTGCAGCATCATCAGGATTTTCTACCGCCGCCGCCGGCGCGAACCTCGCCCCGCCGCCGC
CGTACCCGGAC------CACCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTGA------------------------
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>chr5A_1_TraesCS5A01G473800
ACAAGATGCTACTTGGTTGTATATAAAATGATTGGGC-TATAATACTCCTCTTCGCAACAATTAAATTACTCAGTAGGTG
AACATTTTATATATTCAACTCTAGCATATAATACAAATTTGT-TGTCGGCATAGAAATGAGTTGCAATCATTTCATAAAT
AGGAAGAACACATGGCTTAT----------------------ACCAAACTAGCAGCCTAA---------AAAGGTTTTTT
TTTCTTCTTTCTGAGAGGAGGCATTTAGCTTGTGGAGCAAAATGTTGAAGCGGCT------GGGCGAAAAAACC--CTCG
GCTGATCCGCGTGAGGGCACGACACGTGGCGTCCCGGTCCACGGGGTGTGTGGCCGTAGCGATTAGCGAGGCTCCGCTGC
ACAAAAATAGTTTACCTCTGATGCCCTTGGCCTCCCCGACGTCCCATCTCGCTTTCTCTCTT----TCTCTTTCTCCCAC
TGGCCT----GGCCCCCTCTCCTCGTCGTCCTCCAGTCCTCATCCCCC-GCCCCATGGCCACCACCACCACGGCCNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAC
TCATCGGTCCAGGTCGGTCGCTCGGAGCCGAGCGGCGGCGGGCGGGCGAGGAGTGCGTTTTATTCGGT------CCCGGC
GGGCCTCGGATCGGAGATGGTGCTGGATCTCAATGTGGAGTCGCCGGCGGACTCGGGCACGTCCAGCTCCTCCGTGCTCA
ACTCCGCGGACGCCGGTGGCGGCGGC---TTCCGGTTCGGCCTGCTCGGGAGCCCTGATGATGACGACTGCTCCGGCGAG
CCGGCGCCGGTCGGGCCCGGGTTCGTCACGAGGCAGCTCTTCCCCGCGTCGCCGCCCGGGCACGCGGGCGCGCCCGGGGT
GACGATGGGGCAGCAGGCCCCGGCGCCTGCGCCGATGGCGCCCGTGTGGCAGCCGCGGCGCGCCGAGGAGCTCCTCGTGG
CGCAGCGGATGGCGCCCGCGAAGAAGACGCGGCGGGGCCCGAGGTCGCGCAGCTCGCAGTACAGGGGCGTCACCTTCTAC
CGCAGGACCGGCCGGTGGGAGTCGCACATCTGGTCAGCCCTCCTCTCGTCTCCCTACTCCTCCTCCATGACTATAGTTAT
TACCCAAATCACTAATCAATCGCTGGCCTTTGTCCGTCTGATTCCACCAGGGATTGCGGGAAGCAGGTCTACTTGGGTGA
GCTCAAACAAATCCCAGCTCGAGCTCCGATCTCCTCGGTGTCTAATTTCGATTATCTTAGCTGTATGGGCTCGTGATTAA
CACTGGATAATTTCTTCAGGTGGTTTCGACACTGCGCACGCGGCCGCAAGGTGAACTAATTAATTAACCAGGCCTCGTTT
GAATTCCTTTTGCCCCGATTTGGCCACGAACTGTGTACTGAGATGAGACGGTGTGGCGTGGCGCAGGGCCTACGATCGCG
CGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTGAGCGACTACGAGGAGGATTTGAAGCAGGTAATC
TTATCCAAGCCTAGTTGATTGC------------TGTACTACCAAGTAGTGCGCCGGATACATATGTATCGGTGGTTTGT
CCGATGGTTGATATCTGGTGGGTGGTGGTGGTGTTTTTTGCCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATC
CTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGA
GGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTAAGCAGGCACACACACAGCTCACGCACTAAAATTAATTCACTTCGCCC
ACATTATCATAGTAGTAGTTTCTTTTATCAAATGCCATTG-----ACAAGATTCAGTTGAAATGAAATTTCACAGACTGC
TCATGAACTTGACACTAATTAGTAGTAGATGTGACAGGGCAGCTGTTCATGCTGTGGACGTTTAATTAGCCTGTCGCAGG
TAATCATCTTAGATTACCCC-TTTTGAAACATAATCTTAGCTGGTTTAGGGTAGGGTCATCAAGTTAATCCATGTTGTTA
GTTGTTGGCGCGTCCTGTGTTGGTGCTGGTGAGACGTCCACTTCCCCCGACACGACACTC-GATTGCAGACATCTATTTG
GAGCAACTGTTAGGCTCCACATAAGTATATGATCGAGTCGTCCAGACAAAATTAGTCTAATCCAATCCGTGCACATTATG
GTCCAGACCCAGAATTGTCACCCTACACCTTCACACCCCTATCTCCGTTGAGCTGTGGTCTCATCTCATATACCTGATAC
CCACATTATCATCACACGCGCAGGTACATATATCTGGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGTACTTTGATTT
GCGCTGATCATTAACATTTGG--GCTCACAAAACTTCCTTAATCTTTGCTCACTCACTCTAGTGTCATGTTGGATTTGGT
AGGGCGTACGACAGGGCGGCGATTCGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGA
TGCTCCACCCGACGCCGAAAATGAGGGTACTACT--ACAATCGGTCTCACCTGTCGAATTTCTCCAATCACACCC-AAGT
CTTATCTCATCGATATCGTTGTTGTTTTCTTAGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTGCGGATGTCGCAA
CCCACCGCGCACGATCCCAAGAGGGACAACATCATCGCCGGCCTTCAGTTAACTTTTGATTCCCCTGAATCGTCAACCAC
AATGATCTCTTCTCAGGTAAAGAAACAA----AATTATGTTTAGCACTAGCTAATTCAGTGGTTAGATTTGCTCAAATAG
AAAATTTGCTGTTGGCCCAGTTGTGTCGGTGGATGAGATATTATTGATCCAGGTCGTATGGCATATACTCTGTCCTAAAC
TTACGATATTTGTGCCTTT-TGATATCGCTGTAGCCAATGAGCTCATCTTCGTCCCAGTGGCCTGTGCATCAACATGGCA
CGGCAGTAGCACCTCAGCAGCACCAGCGTTTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTATCATCA
TCACTACGAGAACGACCAC-----CTCCTCCTCCTCCTCCTCCTCTGCTTGGTGCGCTGCTCCACCAGCTTACTGAAACT
GTTGCTACCACTGAATAATGTTTCTGAAGAAACTGCTAATAACATTTTCAGTTTTCGACAAGTTCGTTCCTGAAATTAAG
GTTTCCATGCTTCTTTCC----TAAAACTAATCACGCCTGCTCTCCTAAAACATCTACAG-GTGCAAGAATTTTGGGTGT
AGTGATGTGTCTGTTGACTGA-----------------------------------------GCATCTCGTCTCATGGAC
AGACAGAGCATGCTGTGTGGTAGTACCAGAGTACTTACTAGATGTGGGCACTACTGTTTGCCCTGTGAGCTC--------
-----------------GCACCACCTTTC-GAAAAAAACTGCAGTGCGCCCTCCGGTTCTTGCAGTTCCATCCGTCCCCC
ATGGCACAGCTTTAGATGCA------------------------------------------------------------
-----------------------------------------------------------------GCAGCAGCTTGCTTA
GTT---GTAGTACCCTGATCACATGGCGCAGCTTTATTCTTGGTAGCCACTGTGCATTCACATGAAAGCAAAGCTTTG--
-GTGCATGCACGGCCATGACTTGACGCTCTATCTCACTGCTGG-----TGCTGGTGCAGGTGCAGGTGCAGGAGAGGCCC
ATGGAGGCAAGGCCCCCTGAGCAGCCGTCGTCCTTCCCCGGCTGGGGGTGGCAAGCGCAAGCCATGCCGCCGGGCTCCTC
CCACTCGCCGTTGCTTTACGCTGCAGCATCATCAGGATTTTCTACCGCCGCCGCCGGCGCGAACCTCGCCCCGCCGCCGC
CGTACCCGGAC------CACCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTGAAGCTGGCCGTTGTGACCAGACGGC
GGTGGGTGCGCGCGGTCGAGGTGTTCGCT--------------------CCTCGTCGTCGGTAACGCTTGTTGTGAAACT
ATAATCGGAGAGAGATG-ACATTGCCAGGCCATGTGTGGTGACACTACT----GGCTGGTCTCTCGCC------GCCTCG
CCATGATCGGGATCACGCGGATCATGGCTGTTC---ATTAGATTCTCATGTATCCAATGTTCAAGTTTCCCAAACGG---
-TTGAAAAAACTTTGAAATTTGTGATGGCAAATTCATGCATGGGTCG--CACGGTGC-GCCCTTGCACAAGCGCGGGGAA
GCAC--TCTGTTGTTTTACAGCAGTCCGCCATTGTTGCGTTAACCGTTGGGCC-TTCTGGCCGAGGGCGAGCGGCGATTG
ACAGGCGGGCCCTCCCCGGACGCGACTGGTGG------------------GCGACTAGGTGAGGTGAGGTGAGGTGAGTA
GGCTAGGCGGTG-GGTCAGTGATTGTTCGTTGCCATCCTCCATTCTGGGAGGGGAGCAAGCTGTGATTGATGGGCCGTAA
ACCGCAGCAGGCATCACCTTTTTCTCCTCGCTTCCTA----------------------------------TTCAATCCC
GCACAGTGAAGTGAAAGCCTTTGTGGGTG--------------------CCCCGGCCTTGTGGCGCTAGCGATAGCTAAT
AAGCCAGCTACCCATGTTTGCCACCCCACCCACACACCCATC--------CATCCATCCACAATAGCAAAGCTACCCGTA
GTACTATACCAGCGCCACTGTGCCATGCCAGTAGTACTACGCTGTAGCCTGTAGCTGAGCGTGGGGCTCGCTCTCGCTCT
CGCTCTGGCTGGCCTGGCCGTGCAGAGTGCGCTAGAGCGGGCACTGGAGCGGCACAGT---GCGGCCCGGCCGGAGCG--
---GCTTCTCGTCCGCTGCGCCCAATGGCGCCGCGCCGTGTGTGCAGC---GCCAGAGCAT----GCATGCGTCGCGCCC
GCCCTCCCTCCGCGGCGCCGCTGCAGA---------ATCCCCACCCTGTTTTGGCGATTCGTGCG---CCTCGGTCGCCG
CGAACTGC
>chr5D_1
ACAAGATGGTACTTGATTCTATATAAAAACAAATGTATTATAATACTCATCTCCGCAACAATTAAATTACTCTGTAACTT
GATATTTTATATCTTTAGTTTTGGCATCTAATACCAGACCAGACGTCGACATAGAAATGAGTTGCAATT------TCAAG
AGATAGAACACATGGTTTGTTCCAAACTCGAGCTCTAGATCGACCAAACTAGCAGCCTATATATTTCTGAGTCATTTTTA
CCTTT------TGTAAAGAA------------------AAAATGTTGAAGGCGGCTGTCCGGGCCAAAAAAAAC--CTCG
GTTGATCCGCCTCGGAGGGCGACACGTGGCGTCCCCATCCGCGGGGTGTGTGGGCGTAGCGATTAGCGAAGCTCCGCTGC
ACAAAAATAGTTTACCTCTGATGCCCTTGGCCTCCCCGACGTCCCATCTCGCTTTCTTTCTCTCTCTCTCTTTCTCCCAC
TGGCCT----GGCCCCCTCTCCTCGTCGTCCTCCAGTCCTCATCCCCCCGCCCCATGGCCACCACCACCACCGCCTCCTC
CCCCTCCCCCTACCACTACTTCTACTCCCCCCGCCTCGCCCTCGCAGCCCGCGGCCGCCGCGCTCCCATGCCATAGACGC
GACCCC--------------------------------------------------------------------------
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------------------------------------------------------------------------------AC
TCATCGGTCGAGGTCGGTCGCTCCGAGGCGAGCGGCGGCGGGAGAGGCGGTGGGTCAAGCGAGTTTCGGAGGCGCCCGGC
GGGCCTCGGATCGGAGATGGTGCTGGATCTCAATGTCGAGTCGCCGGCGGACTCCGGCACGTCCAGCTCGTCCGTGCTCA
ACTCCGCGGACGCCGGCGGCGGCGGCGGCTTCAGGTTCGGCCTGCTCGGGAGCCCCGATGATGACGACTGCTCCGGCGAG
CCGGCGCCGGTCGGGTCCGGGTTCGTGACGAGGCAGCTCTTCCCCGCGTCGCCGCCCGGTCACGCGGGCGCGCCCGGGAT
GATGACGGGGCAGCTGGCACCGGCGC---CGCCGATGGCCCCCGTGTGGCAGCCGCGGCGCGCCGAGGAGCTCGTGATGG
CGCAGCGGGTGGCGCCCGCGAAGAAGACGCGGCGGGGGCCGAGGTCGCGGAGCTCGCAGTACAGGGGCGTCACCTTCTAC
CGCAGGACCGGCCGGTGGGAGTCGCACATCTGGTTAGC---CCTCTCATCTCCCTACTCATCCTCCATGACTATACTTA-
---CCAAATCATTAATCAATCGCTGGCCTTTGTCCGTCTAATTCCACCAGGGACTGCGGGAAGCAGGTCTACTTAGGTGA
GCTCC-ACAAATCCCTGCTAAAGCTCCGATCTCCCCGGTGTCTAATTTCGATTATCTTAGCCATGTGTACTCGCAATTAA
CACTGGTTAATCTCTTCAGGTGGTTTCGACACTGCGCACGCGGCCGCAAGGTGAATTTATTAATTAATCAGGCCTTGTTT
GAATCCCTTTTACCCCGATTTGACCACGAACTGTGTACTGAGATGAGACGGTCCGGCATGGCGCAGGGCCTACGATCGCG
CGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTGAGCGATTATGAGGAGGATTTGAAGCAGGTAATC
ATCTAAGCTGTAAGCTATAATCTGAGTAGAAGATTGTACTACCAAGTAGTGCGCCGGATA---ATATATCGGTGGTTTGT
CCGATGGTTGATATCCGGTGGGTTGGGCTTGTGTTTTTTGCCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATC
CTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGA
GGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTAAGCAGGCACACACACAGCTCACGCACTAAAATTAATTCACTTCGTCG
ACATTATCATACTAGT---TTCTTTAATCAAATGCCATATACAGTACAAGATTACGTTGAAATGAAATTCACAAG-CTGT
TCATGAACCTGACACTTATTAGTAGTAGATGTGACATGGCAGCTGTTCATGCTGTGGACGTTTAATGAGCCTGTCGTAGG
TAATCAATCTTAGATGATATATTTTGAAACATAACCTTAGCTGATTTAGGGTAGGGTCATCAAGTTAATCCATGTTGTTA
GTTGTTGGCGCGTCCTGTGTTGGTGCTGGTGAGACGTCCACTTCCCCCGACAC-----TC-GATTGCGGACATCTATTTG
GAGCAACTGTTAGGTTCCAC--------ATGATCGTGTTGTCCAAAAAATAATAATCTAATCCAATCCGTGCACATTATG
GTCCAGACCTGGAATTGTCACCCTACACAC-----CCCCTATCTCCGTTGAGCTTTG-----ATGTCATATACCTGATAT
CCACATTATCATCGCA--CGCAGGTACATATATCTTGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGTACTGTGATTA
TCCCTGATCATTAACATGCGG--ACTCACAAAACTTCCTTAATTTCCGCTCACTGACTCTAGTGTCATGTTGGATTTGGT
AGGGCGTACGACAGGGCGGCGATTCGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGA
TGCTCCACCCGACGCCGAAAATGAGGGTACTACT--ACAATCAGTCTCACCCGTCGATTTTCTCCAATCACA-CC-AAGT
CTTATCTCGTTGATATCGTTGTTGTTTTCATAGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTACGGATGTCGCAA
CCTACCGCGCACGATCCCAAGCGGGACAACATCATCGCCGGCCTTCAGTTAACTTTTGATTCCCCTGAATCGTCAACCAC
AATGCTCTCTTCTCAGGTAAAA-----AAATTAATCATGTTTAGCACTAGCTAACTCAGTGGTCAGATTTGCTCCAATAG
AAAATTTCCTGTTGGCCCAGTTGTGTCGGTGGATGAGATATTATTCATCCAGGTCGTCTGGCATATACTCC-TCCTAAAC
TTACGATATTTGTGCCTTT-TGATATCGCTGTAGCCAATGAGCTCATCTTCTTCCCAGTGGCCTGTGCATCAACATGGCA
CGGCAGTAGCACCTCAGCAGCACCAGCGTTTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGT---ATCG
TCACTACGAGAACGACCCC-----GTCCTCCTCCTCCTCCT---CTGCTTGGTGCGCTGCTCCACCAGCTTACTGAAACT
GTTGCTACTACTGCATAATGTTTCACAAGAAACTGTTAATAACATTT-CACTTTTTGACAAGTTCATTCCTGAAATTAAG
GTTTACATGTTTCTTTCCCTGGTAAAACTAATCATGCCTGCTCTCCTAAAAACATCTACAAGTACTAATCATTGACTGAG
-----------------CTGAGCTGCTTGCTTTTTTGAAACGAAACGCAAGCTTTTTCATTGGCATCTCGTCTCATGGAC
AGA----GCATGCTGTGTAGTAGTACCAGAGAACTTACTAGATGTGGGTGCTACTGTTTCCCCTGTGAGCTCTCCTGATT
GATGGTTCCGTGAGCTTGCACCACCTTTC-G-AAAAAACTGCAGTGCGTCCTCCGGTTCTTACAGTCCCATCCGTCCTCC
ATGACACAGCTTTAGATGTA------------------------------------------------------------
-----------------------------------------------------------------GC------TTGCTTA
GTTGTAGTAGTACCATGATCACATGGCGCAGCTTTATTCTTGGTGGACACTGTGCATTCACATGAAAGCAAGCTTTGCTG
CGTGCATGCACGGCCATGACTTGACACTCTCTCTCGCGTTGTTGCCACTGCAGGTGCAGGTGCAGGTGCAGGAGAGGCCC
ATGGAGCCAAGGCCCCCTGAGCCGCCGTCGTGCTTCCCCAGCTGGGGGTGGCAAGCGCAAGCCATGCCGCCGGGCTCCTC
CCACTCGCCGTTGCTTTACGCTGCAGCATCATCAGGATTCTCTA---CCGCCGCCGGCGCGCACCCCGCCCCGCCGCCGC
CGCCGTCGTACCCGGATCACCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTAGCTCTCTCTCTCTCTCTCTCTGCTT
GCTCGGCCATGGACGGTGGCCGACGAGCTTGTGTGTGTTGGAGGTGCTCCCGCCTCGTCGGTAACAGTTGTTGTGAAT--
-TAATCGGAGAGAGACACACGTTGCCAGGCCATGTGTGAGTGTGACTGGCTGAGGCTGGTTTCTCTCCGCGTCGGCGTCG
CCATGATCAGGATCACGGGCATCATGGCTGCTCGTTATTAGATTCTCATGTATCCATTGCTCACGTTTTCCAAACAG---
-TTGAAAAAACTTGGAAATTGTTGATGGCAAGTTCATGCATGGATGGATCACACTGGTGCCCTTGCAGAAGAGCGGGGAA
GCACAGTCTGTTGTTTTA----------CCGTTGGTGCGTTAACCGTTGGGCTTTTCTGACCGAGGACGAGCGGCGATTG
ACAGGTGGGTCCCACCCGGACGCGACGGGTGGGCAGTGAGGAGGCAGCGAGCTACTG----------GGTGAGGTGAGTA
GGCTGGGCTAGGCGGTCAGTGATTGTTCGTTGCCATCGTCCATTCTGGGAGCGAC-----CTCTGATTGATGGGCCGTAA
CTGCGGCTGGAGTGGT---------AGCCAATCCCCTGGTGAGGTGAGTAC---------------------TCAATCCC
GCACAGTGAAGTGAAAGCCTTTGAGGCTGTTCGGGTGTGCCCTGCCCTCCCCTGACCTTGTGGCGCTAGCCAGCTATCTT
TG---------------------------CCACCCACCCACC--------CATCCATCCACAATAGCAAAGCTAGTATGT
ACTGTAGTACCAGTACTGTGCC----------AGTAGTAGGCTGTAGCCTGTAGGTGCGCGTGGGGG-------CGCTCT
CGCTGTGGCCGGCCGTGCAGCACACC--------------GCACTGGAGCAGAGCAGTGGAGCGGCCCAGCCGGAGCGGA
GTGGCTTCTCGTCCGTTGCCCCCAATGGCGCCGCGCCGTGTGTGCAGTGCCGCGGCAGCGCCAGAGCATGCATCA-----
---CTCCCTCCGCGGCGCCGCTGCATGCATCACTCCCT-CCCACCCTCTTTTGGCGACCCGTGCG---------------
--------
>chr5B_1
ACAAGATGCTACTTGATTCTATATAAAACAATTA-TATTATAATACTCATCTTCGCAGTGATTAAATTACTCTGTAACTT
GACATTTTATATCTTTAGCTTTGGCCTCTAACACCAAACCATATGTCGACATAGAAATCAGTTGCAATCATTTCA-CGAG
AGAAAGAACACATCATTTAT----------------------AGGTCATTTATCTC----ATTTTTCTCAAACGTTTTTT
TTTAT------TGAAAGGAGGCATTTACCTTGTGGAGCAAAATGTTGAAGGCGGCTGTCCGGGCCAAAAAAAAAAACTCG
GTTGATCCGCCTGGGAGGGCGACACGTGGCGTCCCCATCCGGGGGGTGTGTGGGCGTAGCGATTAGCGAAGCTCCGCTGC
ACAAAAAAAGTTTACCTGTGATGCCCTTGGGCTCCTCGACGTCCCATCTCGCTTTCTTTCTT----TCTCTTTCTCCCAC
TGGCCTGGGAGGCCCCCTCTCCTCGTCGTCCTCCAGTCCTCATCCCCCCGCCCCATGGCCACCACCACCACNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---------------------
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-----------CGGAGATGGTGCTGGATCTCAATGTCGAGTCGCCGGCGGACTCCGGCACGTCCAGCTCGTCCGTGCTCA
ACTCCGCGGACGC---------CGGCGGCTTCCGGTTCGGCCTGCTCGGGAGCCCCGATGACGACGACTGGTCCGGCGAG
CCGGCGCCGGCCGCGTCCGGGTTCGTGACGAGGCAGCTCTTCCCCGCGTCGCCGCCC------------GCGCCCGGGAT
GATGATGGGGCAGCAGGCCCCGGCGC---CGCCGATGGCCCCCGTGTGGCAGCCGCGCCGCGCCGAGGAGCTGGTCGCGG
CGCAGCGGGTGGCGCCCGCGAAGAAGACGCGGCGCGGGCCGAGGTCGCGGAGCTCGCAGTACAGTGGTAGTC--------
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-----------------------------------------------AGTGCGCCGGATA---ATATATGGGTGGTTTGT
CCGATGGTTGATATCCTGTGGGTGGTGGTGGTGCTTTTTGCCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATC
CTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGA
GGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTAAGCAGGCACACACAC-----------TAAAATTAATAAATTTCATCC
ACATTATCATACTAGT---TTCTCTAATCAGATGCCATATACAGTACAAGATTACGTTGAAAAGAAATTCACAAG-CTGT
TCATGAACTTGACCCTAATTAGTACTAGATGTGACAAGGCAGCTGTTCGTGCTGTGGACGTTTAATTAGCCTGTCGTAGG
TAATCATCTTAGATTATCCC-TTTTGAAACATAATCTTAGCTGGTTTAGGGTAGGGTCATCAAGTTAATCCATGTTGTTA
GTTCTTGGCGCGTCCTGTGTTGGTGCTGGTGAGACGTCCACTTCCCCCGACAC-----TCTGATTGCAGACATCTATTTG
GAGCAACTGTTAAAGGTTCCACA--TATATGATCGACTTGTCCAAACAAAATTAATCTAATCCAATCCGTGCACATTATG
GTCCAGACCCGGAATTGTCACCCTACACAC-----CCCCTATCTCCGTTGAGCTGTG-----ATCTCATATACCTGATAT
CCACATTATCATCGCA--CGCAGGTACATATATCTTGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGTACTGTGATTA
TCCCTGATATCCACATTAAGGAAGCTCACAAAACCTCCTTAATTTCCGCTCACTCGCTCTAGTGTCATGTTGGATTTGGT
AGGGCGTACGACAGGGCGGCGATTCGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGA
TGCTCCACCCGACGCCGAAAATGAGGGTACTACAACACAATCAGTCTCACCTGTCGATTTTCTCCAATCACA-CCCAAGT
CTTATCTCATTGATATCTTCGTTGTTTTCTTAGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTTCGGATGTCGCAA
CCTACCGCGCACGATCCCAAGCGGGACAACATCGTCGCCGGCCTTCAGTTAACTTTTGATTCCCCTGAATCGTCAACCAC
AATGCTCTCTTCTCAGGTAAAGAAATTAAATTAATCATGTTTAGCACTAGCTAGCTCAGTGGTTAGATCGCTGGAATAGA
AAAAATTCCTGTTGGCCCAGTTGTGTCGGTGGATGAGATATTATTGATCCAGGTCGTATGGCATATACTCC-TCCTAAAC
TTACGATATTTGTGCCTTTTTGATATCGCTGTAGCCAATGAGCTCATCTTCTTCCCAGTGGCCTGTGCATCAACATGGCA
CGGCAGTACCACCTCAGCAGCACCAGCGTTTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGT---ATCA
TCACTACGAGAACGACCCCTCCTCCTCCTAGTCCTCATCCT---CTGCTTGGCGCGCTGCTCCACCAGCTTACTGAAACT
GTTGCTACTGCTGAATAATGTTTCAGACGAAACTGTTGATGACATTT-CAGTTTTTGACAAGTTCATTCCTGAAATTAAG
GTTTCCATGTTTCTTTCCTGGTG-AAACTAATCATGCCTGCTCTCCTAAAAACGTGTACAAGTGCTGGAATTCTGGGTGT
AGTGATGTGTCTATTGACTGAGCTGCTTGCTTTTTTGAAACGAAACGCAAGCTTTTCG-TTGGCATCTCGTCTCATGGAC
AGA----GCATGCTGTGTAGTA---CCAGAGTACTTG------------------GTTTCTCCTGTGAGCTT--------
-----------------GCACCTCCTTTCAGAAAAAAACTGCAGTGCGTCCTCCGGTTCTTACAGTTGCATCCGTCCTCC
ATGACACAGCTTTAGATGTACTCCCTCCGTTCTGAATTACTTGTCTTAAATTTGTCTAGATACGGATGTATCTAGACTCA
TTTTAGTGCTAGACATATCTGTATCTAGACAAATCGAAGACAAGTAATTTGGAACGGAGGGAGTAGC------TTGCTTA
GGTGTAGTGGTACCCTGATCACATGGTGCAGCTTTATTCTTGGTAGACACTGTGCATTCACATGAAAGCAAGCTTTGGTG
CTTGCATGCACGGCCATAACTTGACGCTCTCTCTCT--------------------CAGGTGCAGGTGCAGGAGAGGCCG
ATGGAGGCAAGGCCCCCTGAGCCGCCGTCGTGCTTCCCCGGCTGGGGGTGGCAAGCGCAAGCCACGCCGCCGGGCTCCTC
CCACTCGCCGTTGCTTTACGCTGCAGCATCATCAGGATTCTCTA---CCGCCGCCGGCGCGCACCCCGCCC---CGCCGC
CGCCGTCGTACCCGGATCACCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTAGCTCTCTCTCTCTCTCTCT--GCTT
GCTCGGCCACGGACGGTGGCCGACGCGCGTGTGTGT--TGGAGGTGCTCGCGCCTCATCGGTAGCCGTTGTTGTGAATTA
ATCG---------------------------------GAGTGTGACTGGCCCAGGCTGGTTCCTCTCCGCGTCGCCG---
---TGATCAGGATCACGAGCATCGTGGCTGCTCGTTATTCGATTCTCATGTATCCATTGCTCAAGTTTCCCAAACAGACT
CTTGAAAAAACTTGGAAATTGTTGATGGCAAGTTCATGCATGCATGGGTCACATTGC-GCCCTTGCCGAAGAGCGAC---
-----GTCTGTTGTTTTA----------CCGTTGGTGCGTTAACCGTTGGGCTTTTCTGACCGAGGACGAGCGGTGATTG
ACAGGTGGGGCCTACGCGGACGCGACGGGTGGGCAGTGAGGAGGCAGCGAGCGACTGGGTGAGGTGAGGTGAGGTGAGTA
GGCCGGGGTAGGCGGTCAGTGATTGTTCGTTGCCATCCTCCATTCGGGGAGCGAC-----CTCCGATTGATGGGCCGTAA
CCGCAGCTGGAGTCGTGTCACTTTTAGCCAATCCCCTTCATTATTTTTTTCCCTTTTCCCTTCCTCTTCACTTCAATCCC
GCACAGTGAAGTGAAAGCCTTTGAGGCTGTTCGGGTGTGC---------------CCTTGTGGCGCTAGCCAGCTATCTT
TG---------------------------CCACCCACCCACCCATCCAACCATCCATCCACAATAGCAAAGCTAGTA---
------GTACTGGTACTGTGCC----------AGTAGTACGCTGTAGC----------GCGTGGGGG-------CGCTCT
CGCTCTGGCTGGCCGTGCAGCACACTACCTACAGTG---------------GAGCAGAGCAGTAGCCCAGCCGGAGCG--
---GCTTCTCGTCCGTTGCCCCCAATGGCGCCGCGCCGTGTGTGCAGCCGCGCCAGAGCAT----GCATGCGTCA-----
---CTCCCTCCGCGGCGCTGCTGCATGCACAGAGCGATCCCCACCCTCCTTTGGCGACTCGTGCGTCGCCTCGGTCGCCG
CGAACTGC
>SNPs
---------------S--S---------SS---S-SS-----------S-----------------------S---SS-S
S-----------S--S-S--S-S----S------S--SSSS-------S---------------------------S--S
--S------------S-------------------------------------------S------------S-------
---S-SSSSSS---S------------S----------------------SS-SS--------S-S------S-------
-S--------S--S-S-SS----------------SS---S------------S---------------S----------
---------------------------------------------------------S----------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
---------S-------------S---S--------------S-S-SSS-SS-SS-SSSSS-S-SSSS------------
------------------------------------S-----------------S--------------S----------
----------------S--------------------------------------S------------------------
---------------S----------S--------------------------------S------------------S-
--S-----------------------SSS----------S---------------------------------S------
--------S----------------------------S-----------S------------------------------
----------------------------------S---SSS------S-----------S---------------S---S
SSS--------S---------------------------S-------------S--------------------S-----
----SS---------S---SS-------------S--------------------------SS-S--SS----SS-----
------S----S-------------------------------------------S-S---------S-------S----
----S------S----------S-----------------------------SS---S----------------------
----------------------------------------------------S--S------------------------
S-S-SSSSSSSS--S-SSSSS---------------------------------------SSS--S--------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-----------S----SSS------S------------SS-------------SS--------------SSSS--S---S
------------------------------------S---------------------------------------S---
----------------S---------------------------------------------------------------
-----------------------------------------------------SSSSS----------------------
--------------S------S-SS-------------S-----S---------S-------------------------
----------S-----------------SSSSSSS----------------------SSSSS-----------------S
-------------S--SS-----------------S-------------------------------------S-----S
S-S--------------SS------------------------S-SS---------------------------------
--------------------------------------------------------------------------------
------------------------------------------S--------------S--------------S-------
----------S--------------------------------------------------------S------------
--S------------------S----------------------------------------------------------
----S--------------------SS--------S------------------S-------------------------
-------S--------------------------------------------------------------SS--------
---------------------------------------------------S----------------------------
-------------------------------------------------------------------------SSS----
-----------------S-----------------------SSS------------------------------------
--------S---------------S----------S-----------S-------S---------S--------------
---------S------------------------S----------------SSSSSSSSS-----S--------------
------------S-------------------------------------------------------------------
---SSSS-----------S-----------------------------SS---------S--------------------
------------------------------------------------S------------S---------------S--
---S--------------S-------------------------------------------------------------
-------------------------------------------------------------------SSSSSS-------
----------------------------------------------S------------------------SSS--S---
------------------------------S----S-SSSSSS--------S----------------------------
----------------------S--------S------------------------------------------------
---------------------------------------S----SSS--------------S---S--------------
--SSSS--S---------------------------------------------SSSS--SS-SS-SSSSSS-SSSSSSS
-S-S--SSSSS-SS-SS-SSSSSSS--------------------------S-S-----------SS----------SSS
---------------SS---S-----------------SSSSSSSSSSS-----------S----S----------S---
--------S--------S-S----------S-------------------------S--S---------------S----
-------------S------SS---------S-----------S-S------SS-------------S---S--------
------------------SSSSSSSSSS--S---S-----------------S------S------S-------------
-----S---S---S------------S-----------------------------S-----------------------
----S---SSS----------------------------------------S-SSSSSSS--S-----------------
S-SSSSSSS-SSSSSSSSSSS--S-SSS-SS-S--SS-------------------------------------------
-----------------------S--S-------------------------S-S---------------S-SSSS-SS-
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S------S---------------------------------SSSSSS
SSSS--SSS-S-SSS-SS--SSSSSSSSSSSS----S-----------------S--S--------SSSSSSSS------
--------------SS--S-SS--SSSSSSS-SSSSSSSS----------S-SS--------------S-----------
---------------S---S------------------------------------------------------SSSSSS
SSS----------------------SS--------------------S---------S----------------------
--------
>forward_458
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------ACGTCCCATCTCGCTTTCTC----------------------
--------------------------------------------------------------------------------
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>reverse_1748
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-------------------------------------------------------------------CCAGGCCTCGTTT
GAATTCC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------
>forward_1023
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-------------------------------------------GGGCGAGGAGTGCGTTTTAT-----------------
--------------------------------------------------------------------------------
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--------
>reverse_2675
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----------------------------------ACCCCTATCTCCGTTGAGCT--------------------------
--------------------------------------------------------------------------------
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--------
>forward_1982
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------------------------------------------CAAGTAGTGCGCCGGATACA------------------
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--------
>reverse_4004
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---GCACAGCTTTAGATGCAGCA---------------------------------------------------------
--------------------------------------------------------------------------------
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--------
>forward_2700
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----------------------------------------ATCTCCGTTGAGCTGTGGTC--------------------
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--------
>reverse_4683
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------------------------------------------CACTACTGGCTGGTCTCTCG------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
