>input_sequence_22581
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------------------ATGTATGGCAAGCCTGTCCGCCGCATCGGCGACGGCTACGTCGATAACGTTACACCAGAAAC
CGTGAAGGAGGACATACTCCTCCTGCTCGACGACATCCACGGCTTCTACAAGGCGGCGCTCGATCGGCTGCCTGTAAAGA
GGATGCCCGCGCTGGCTCCCTGCCTTCTCAAGGCCGGCGTGTGCTTCGGCTTCCTCGACCCAGTCTCCAACATCATGCTC
AACACCATCGCCTACTCGCAGCGGTTGCCCAGCACCGAGAGTCAAGAAGGGGCCACTAGAAA------GTCGATCTTCTC
CAAGATCTCCACTGACACTCAGGATCGCAGAATTTTCCGGATACCGCTGCCCGGACACATGGCGGGCGGCATGACCATCG
CGCGGCTGTCGCTGGAAGGTCTGGTCAGCTTCCTCCTGTTCCACTTCCGCTACCTCGCGGAGACGGAAGCCCTGCGCTAC
CTGCGCCTGGCCAGGGCCGACCTTGTCGCCGCCGTGCATCTCATCAACCAAGATCGTAACAAGTCGTGTTCGGCGTCTGG
CATTGCCAAGATTCACAACAGGCCCGCGTTCGACATTACATCTCCTACCTCCAAGGTTGCCCTGGAGTGTGCCGCTGCCT
CTGCGAGGCACCCTGAACCAGCCATCCTGGTGAACGCGTCGCTGTCGGCGGTGTCTCGGCTGAGCAAGGTCTCTAGCCTT
TTGCAGGTGCATCGCCTGCCCCCTCGAACTATAAGGCGCCTGGAGCTGTTGCTCAGGCGAGAGCCTAAAGTTATGGATCA
AATGGCCATAAGGCGTCCGCTGAATCTTGCTGGGTCACGTCTCCGTGATGGAAAGGAGGAGAAGAGGGATCTTGCTGGTT
CACCTCTCCATGATGGAAATGAGAAGAAGAGAAAGAGGGTCGAGCCGCCTTATGGGGACACAGGATCTATGGTGAGCGTT
GCACATGGGAAGGTAGAGATCGATGTGACTGTGACATATAGATATACAGAGTCTCTTAAGCTGTTGCTTCTCGACAAGAT
CCACCTGCTCTACCTAGATGCACTTTCTAAGTTTCCTAGGGATAGCTTGCGCAAACATCACCATTGCAACCTTCTCAGGG
CTGGTTATTGCTATGGTCTAATGGAACCTGTCTCCAACATCATTTTCAACACCATCTGGTATGACTCTGTAATCTCCACG
CAGCATGAGTATGCACTTGACTTTGAGGTGGACATGATATGCACCAATGCCCTTATGCGAATCGAGTGCTGCTCCCTCTA
TGGCCTTATCGCCTTCCTCCGTCGCCTCTTCCACCATCTGACTGAGCATGATGCTATCAAGTTCCTGCTCAAGAGCAATG
CTGATGTTTGGTCAGCCATCGACATAGCAGAGCAACATGGTCATCATATGTCTGATGTGTACCTCAATGCCTTTAGGGAA
GCAGCTGTTAATTCATGGCACCCTCTCCCTAAAGCACTGGAGAAATTCATCCTGTCAGCCCTGAACATGAATTCGACTGA
GTTGTCAACGATGCTGACCCATGCAGTCAAGAACTGCAGATTTGAGGGACTTGCCATGTCTGTGTCACCTAAATCTTCAC
CTACCAAGTCAGAAGAGCAGGTTCAACAACTGGACAAGTTGGCCTCGAGCTCGGAGTTCTTATCTGAAAACCAAAAAATG
TTCATTTCAGAGATTCAGAAAAAATTTAAGGCTGACCAAAATTTCTATGTCAGGAAGGTCAAAGCTGCGTTGAAGAGCTA
CTCCCAGAAACAAGGGGTTTGTTCATTCACCTATGTTGTTGTATTCTTTGTTTTTATACTTGTGTTTGCTTAAACGTCTG
TTCAGTGATTAGCTTCCTTCTCCTGCCTTGCTTTACATAGGTGTACTATGAGCTTCATGTTATTTGTGGCGTGAATCCTC
-ATGCGGTCAAGGGTGGAACTGCTGATCTTTTTAAGAAAAAGGGCAAATTTGAATACTCCCACATCAACTTTTGGGCAAC
ACGCGAGGGATCAAATTCTGCTGCCACAGATCCAGTACTGTTCTTCGCTGAATGCAGCAATGATGATGAAGATGACAAGG
AAACACCTCCCCTGTGTGTACCAGTATTTAGTTCTTGGATCTCTGATGGTATGATCTCAGCTCTCTTTCACACAGTAGGT
ATCTTGTATTCTGTGATTTGCATAGTTAGTTGAAATAGAAGTGGTAAAACAAGAGTGCTTGGCCTGTGAGAATTAGAAGA
ACCTCCTTACTTTGTAGTGCAATTATGTTTATGCACTACATGCATATTCCAGAATTGTGTATAGCCCAAGTACTCAAAGC
TTCCCTCCTTGCGTACTAACAGAAACCAGTTATAGTTAGCATGATTAAGCCTCATACGTTTTTTTAAGTCTCTTAAGGTT
TAAAGATGGGCATCTTAAAGATTAGAAATTTAAAACCTGAAAGTA-TAGACCACTTAAGCATTT-CCTTAATTATTCAGC
GATCTGAAGTTCTGAACATGTACTAGAAGAATGCCCCCTGTGTTGCTGTGGAGATTT----GTAGTTAAAACGCTGGTAA
ACTACAATTAGTGTAGCTGGCATTTTAGAAGCATGAATTATTAGAAATGCCATTTTCCAAATATGTTTGTATAAGATATA
TAG-TTACCCAAAATATGTGGTGGCTCCTTCGAGAAAATTACATCCAGTCATTGAATTGTTGG-TCCAATGAAATCAATG
AATCAGAATTAATGAAGCTTTGCTCAATTCTTTTCCGAACACTGGCCCAAACACAGTGATATTTCCACATCCTCGACAGT
GATGGCATGTATGCCTGGTGCAATTTTTAGT---------------------------AATGTGTCCCTAGGCATCCTAT
GTACTCTAAATTTCCAGATCAAAGGGTTCTCTTCATTATCTTTTAGATCCATCTTTTGCGCTTAGCTTTGTGTTTTTCCT
TTTTTTATGAGAAATCTGATAATATAATTAATTTTGTTTGGACGAAAGTTCGTTGCTTCCACTGCGAGTTTCTAGGGAAA
AAAATTGTTCACCCATATCATGAATCATATTATGGGCGTTACGAGGACTTTGTTGGAATGGCTCGTGGAGACCATAGCAT
TTGCAATGAAGAAATTATCAGTGCATGCGACTTCCATGCTGATATGATGTGCACATTAAAAGAGGATTGGATCTTTTTTG
ATCCCAACATGGATGCTATGATTGCTCGAGCGAATCCCATTAAGAATTTGTCTACGGAGATGGTGAAATGGAAGAACAGA
ATCTTTTGA-----------------------------------------------------------------------
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>chr3B_1_TraesCS3B01G203400
AAATACCTGAATATTCATTTAAAATGTCGCATACGATCTTTAGTGGAAATGGAAA-TTTTTAACCTATGCAAACATATTT
------------TAATATTTTCTTAAATGAGATGAACATTTGTTTAATGAAATGCGGGAATATTTTCATAAAATGGCATG
TACATTTTTTAGTCTTGCAGATTATTTTTTACATTACGAAAAAAATTATTTACATTGTATACACATTTTAGACAAACCAC
ACACATTTGTTGAAACACAAGAACATTTTTAAAATTTTCAGGAACATTTTATAAAAT--GGCTAACAAAGTTTTATACTA
T--GTTAACCTTTTAAATTCGTGTTTTAAAATTT--------------------TAGAATATATATGCATTTAACTTAAA
ATAAATAGG-AAAAAC--------AATTCTAGTGTCATTAGCATGACTAGCCACGTCGTACTGGCCGTCCCACCACCGAC
GC-CCTGTAACAGCGCAGGGAACGGTCGGTCA---------ATTGGATCAAATACCCCCGAAATTCTAACGGCATGTACA
ATGGTCGATAAGGTAGTCTTATTTTAAATCTTGCATGTAATTTAGATATGACAAAAAAACATGTCTACATTGGGTCATCT
CTTAGTCTTATCTTCAATAACTAGCTATTCCTGAAAACGTGGTGACACATTGTGCTAAGAGATCATCTCTTGTCTTCTCT
TATATAAGAGAAGACAAGCCTTCTCTTATGATTTCTCTCACCTCCACCTCATCATTTATTCTATGTGGCATTGTTAAGGT
AGAACCATTGTACATGCACTAAAACCTTGACCATATTTGTGGGGCAAAATTATACTTGTCTGAGTATA--GATTTGGTGC
GATGCCCCCATTGTGCTTATTATTAGGGTTTTTCTTCTGGGCCTCGTCCTCCCCTATTCTAATCGCCGCCCTTGCCCACC
CCCCTGCACCACCGAAATCCAAACGAATCAGGAAGCATCCACCCTCGCCGCGCCGGAGAAGAGAGCAAGTGCGCCCGTCC
GTCCGTCCGTCCGTCGACATGTATGGCAAGCCTGTCCGCCGCATCGGCGACGGCTACGTCGATAACGTTACACCAGAAAC
CGTGAAGGAGGACATACTCCTCCTGCTCGACGACATCCACGGCTTCTACAAGGCGGCGCTCGATCGGCTGCCTGTAAAGA
GGATGCCCGCGCTGGCTCCCTGCCTTCTCAAGGCCGGCGTGTGCTTCGGCTTCCTCGACCCAGTCTCCAACATCATGCTC
AACACCATCGCCTACTCGCAGCGGTTGCCCAGCACCGAGAGTCAAGAAGGGGCCACTAGAAA------GTCGATCTTCTC
CAAGATCTCCACTGACACTCAGGATCGCAGAATTTTCCGGATACCGCTGCCCGGACACATGGCGGGCGGCATGACCATCG
CGCGGCTGTCGCTGGAAGGTCTGGTCAGCTTCCTCCTGTTCCACTTCCGCTACCTCGCGGAGACGGAAGCCCTGCGCTAC
CTGCGCCTGGCCAGGGCCGACCTTGTCGCCGCCGTGCATCTCATCAACCAAGATCGTAACAAGTCGTGTTCGGCGTCTGG
CATTGCCAAGATTCACAACAGGCCCGCGTTCGACATTACATCTCCTACCTCCAAGGTTGCCCTGGAGTGTGCCGCTGCCT
CTGCGAGGCACCCTGAACCAGCCATCCTGGTGAACGCGTCGCTGTCGGCGGTGTCTCGGCTGAGCAAGGTCTCTAGCCTT
TTGCAGGTGCATCGCCTGCCCCCTCGAACTATAAGGCGCCTGGAGCTGTTGCTCAGGCGAGAGCCTAAAGTTATGGATCA
AATGGCCATAAGGCGTCCGCTGAATCTTGCTGGGTCACGTCTCCGTGATGGAAAGGAGGAGAAGAGGGATCTTGCTGGTT
CACCTCTCCATGATGGAAATGAGAAGAAGAGAAAGAGGGTCGAGCCGCCTTATGGGGACACAGGATCTATGGTGAGCGTT
GCACATGGGAAGGTAGAGATCGATGTGACTGTGACATATAGATATACAGAGTCTCTTAAGCTGTTGCTTCTCGACAAGAT
CCACCTGCTCTACCTAGATGCACTTTCTAAGTTTCCTAGGGATAGCTTGCGCAAACATCACCATTGCAACCTTCTCAGGG
CTGGTTATTGCTATGGTCTAATGGAACCTGTCTCCAACATCATTTTCAACACCATCTGGTATGACTCTGTAATCTCCACG
CAGCATGAGTATGCACTTGACTTTGAGGTGGACATGATATGCACCAATGCCCTTATGCGAATCGAGTGCTGCTCCCTCTA
TGGCCTTATCGCCTTCCTCCGTCGCCTCTTCCACCATCTGACTGAGCATGATGCTATCAAGTTCCTGCTCAAGAGCAATG
CTGATGTTTGGTCAGCCATCGACATAGCAGAGCAACATGGTCATCATATGTCTGATGTGTACCTCAATGCCTTTAGGGAA
GCAGCTGTTAATTCATGGCACCCTCTCCCTAAAGCACTGGAGAAATTCATCCTGTCAGCCCTGAACATGAATTCGACTGA
GTTGTCAACGATGCTGACCCATGCAGTCAAGAACTGCAGATTTGAGGGACTTGCCATGTCTGTGTCACCTAAATCTTCAC
CTACCAAGTCAGAAGAGCAGGTTCAACAACTGGACAAGTTGGCCTCGAGCTCGGAGTTCTTATCTGAAAACCAAAAAATG
TTCATTTCAGAGATTCAGAAAAAATTTAAGGCTGACCAAAATTTCTATGTCAGGAAGGTCAAAGCTGCGTTGAAGAGCTA
CTCCCAGAAACAAGGGGTTTGTTCATTCACCTATGTTGTTGTATTCTTTGTTTTTATACTTGTGTTTGCTTAAACGTCTG
TTCAGTGATTAGCTTCCTTCTCCTGCCTTGCTTTACATAGGTGTACTATGAGCTTCATGTTATTTGTGGCGTGAATCCTC
-ATGCGGTCAAGGGTGGAACTGCTGATCTTTTTAAGAAAAAGGGCAAATTTGAATACTCCCACATCAACTTTTGGGCAAC
ACGCGAGGGATCAAATTCTGCTGCCACAGATCCAGTACTGTTCTTCGCTGAATGCAGCAATGATGATGAAGATGACAAGG
AAACACCTCCCCTGTGTGTACCAGTATTTAGTTCTTGGATCTCTGATGGTATGATCTCAGCTCTCTTTCACACAGTAGGT
ATCTTGTATTCTGTGATTTGCATAGTTAGTTGAAATAGAAGTGGTAAAACAAGAGTGCTTGGCCTGTGAGAATTAGAAGA
ACCTCCTTACTTTGTAGTGCAATTATGTTTATGCACTACATGCATATTCCAGAATTGTGTATAGCCCAAGTACTCAAAGC
TTCCCTCCTTGCGTACTAACAGAAACCAGTTATAGTTAGCATGATTAAGCCTCATACGTTTTTTTAAGTCTCTTAAGGTT
TAAAGATGGGCATCTTAAAGATTAGAAATTTAAAACCTGAAAGTA-TAGACCACTTAAGCATTT-CCTTAATTATTCAGC
GATCTGAAGTTCTGAACATGTACTAGAAGAATGCCCCCTGTGTTGCTGTGGAGATTT----GTAGTTAAAACGCTGGTAA
ACTACAATTAGTGTAGCTGGCATTTTAGAAGCATGAATTATTAGAAATGCCATTTTCCAAATATGTTTGTATAAGATATA
TAG-TTACCCAAAATATGTGGTGGCTCCTTCGAGAAAATTACATCCAGTCATTGAATTGTTGG-TCCAATGAAATCAATG
AATCAGAATTAATGAAGCTTTGCTCAATTCTTTTCCGAACACTGGCCCAAACACAGTGATATTTCCACATCCTCGACAGT
GATGGCATGTATGCCTGGTGCAATTTTTAGT---------------------------AATGTGTCCCTAGGCATCCTAT
GTACTCTAAATTTCCAGATCAAAGGGTTCTCTTCATTATCTTTTAGATCCATCTTTTGCGCTTAGCTTTGTGTTTTTCCT
TTTTTTATGAGAAATCTGATAATATAATTAATTTTGTTTGGACGAAAGTTCGTTGCTTCCACTGCGAGTTTCTAGGGAAA
AAAATTGTTCACCCATATCATGAATCATATTATGGGCGTTACGAGGACTTTGTTGGAATGGCTCGTGGAGACCATAGCAT
TTGCAATGAAGAAATTATCAGTGCATGCGACTTCCATGCTGATATGATGTGCACATTAAAAGAGGATTGGATCTTTTTTG
ATCCCAACATGGATGCTATGATTGCTCGAGCGAATCCCATTAAGAATTTGTCTACGGAGATGGTGAAATGGAAGAACAGA
ATCTTTTGACAGGTATGTCTCTTGCCTAACTTGGAAATTTTAGTTTTGTGGTTGCATCGAGGAGGAAATATTTCTCTCTT
TAGGCCGTGTTTGGAATGTCGTTTTCCTTCTAAACACACTCGTATAGAAAATACAGGTGTCCGCCCGTCGTTTTGGTTTC
CGGTTGGAAATAGCTCTGGGCCGGTATTTTACACCTGTAAGTTATATACACCTGTATAAGATTACACCCATACCAAGCGC
GGCCTTAGCGTGTTTCAAGAAAACTAGAGATAGCCCTATCAGGATATGGTTTGCACCAATAATTAAATATGTATTAGTTT
ATCCCATTTTTATATGATATAACATACCTTGTTCTACTTCGCAGTCATGCTCGATCTTTTTTTTTTCCGAGACAGATCAG
ATGGACTCTTGAAATTGAGATTCTTGAAGAGCTTTCCTGGGAGCACTCGTTCAAGCTTAGTTAACATTTGCTAGAACTGT
TTATTATATTCTTTTGTTGAAGTATATATCAACTTCTTAAGTGTGGTGTTAGTTTGTCAACCATGATGTAAATTATCCTT
GATGCTACTCGAGTATGTGGATATCTAATGCCAGGTTTGCATGTGGGCACTTCATCACAAAGCTATACAGAACAACAACA
ATTTATATGTTGGGCGTTCAGTTCTATTTCCTGGTGCTGCTGGTGGCGGCTGTAGCGGTCGTTCGTCTTGCAGCACCTGG
CTGTTAGTCATCATAGGGATAT----------------------------------------------------------
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-------------------------ATAATGATATGAAGCAGACGTACAACAATGGTCACCAGGTGATTGCCCTAGCAGT
AGCAGCGTGTTTGACAGCCCGAAAGCAAGGGAATGGGAGTTTGTAAGGGATTAAGATAGTCCCAATCTCACGTTTGGTGT
GTGGTGGGAATTCTAGTCGTGGGAATCTGAAAAGATGTTTCATCCCACCAAAATTAACAATGGAACTAAAAAATGGATAT
GTGGGAATTAGCCTCCTTAATTTATTTTTAGTCAACTATTTTGCCCCCACCC
>chr3D_1
AAACACCTGAATATTTATTTAAAATGTTGCATACAATTTTTAGTGGAAATGAACATTTATTAACCTATGCGAACATATTT
TTACATTGTCTGTAATATTTTCTTAAATGAGACAAACATG--TTT--TGAAACGCGGGAATATTTTCATAAAAAGCAATG
TACAATTTTTAATGTTGCAGATTATTTTTTACACTACGCAAACAATTATTTATATTTTATACACATTTTAGAAAACTCCT
GTACATTTGTTGAAACACAAT----TTTTTTTAATTTTCAGGAACATTTTTTAAAACTGGGCTAACAAAGTTTTATACTA
TATGTTAAACTTTTAAATTCGTGTTTTAAAATTTATAAAATACATTTAAAATTTTAGAATATATTTGCATTTAACTTAAA
ATAAATAAA-AAAATAGGGACAATAGTTCGAGTGTCGTTAGCATGACTAGCCACGTCGTACTGGGCGGCCCACCACCAAC
GC-CCTGTAACAGCGCAGGGAA----CGGTCA---------ATTGGATCAAATACCCCCGAAATTCTAA-----------
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----------------------AACCTTGACCATATTTGTGGG----------ACTTTTCTGAGTATATAGTTTGGTGTG
GTCCACC---TTGTTCTTATTATTAGGGTTT--CTTCCAGGCCTCGTCCTCCCCTATTCTAATCTCCGTCCTTCCCTCAC
CCTCCGCAGCACCGAAATCCGAACGAATCAGGAAGCACCA-CCCT-----CGCCGGAGAAGAGAGCAAGTCGCTG-----
GTCCGTCC--------ACATGTATGGCAAGCCTGTCCGCCGCATCGGCGACGGCTACGTCGA-AACGTTACACCAGAAAC
CGTGAAGGAGGACATACTCCTCCTGCTCGACGACATCCACGGCTTCTACAAGGCGGCGCTCGATAGGTTGCCTGTACGGA
GGACCCCCGCACTGGCTCCCTGCCTTCTCAAGGCCGGCGTGTGCTTCGGATTCCTCGACCCAGTCTCCAATATCATCCTC
AACACCATCGCCTACTCGCAGCGGATGCCCAGCACCGAGAGTCAAGAAGGGGCTACTAGAAAATT------GATCTTCTC
CAAGATCTCCACTGACACTCAGGATCGCAGAATTTTCCGGATACTGCTGCCCAGACACATGGCGAACGCCATGACCATCG
CGCGGCTGTCGCTGGAAGGTCTGGTCAGCTTCCTCCTGTTCCACTTCCGCTACCTCGCGGAGACGGAAGCCCTGCGCTAC
CTGCGCCTGGCCAGGGCCGACCTTCTCGCCGCCGTGCATCTCATCAATCGAGATCGTGACAAGTCGTGCTTGGCGTCTAG
CATTGCCAAGATTCACAACAGGCCCGCGTTCGACATCTCATCTCCTACCTCCAAGATCGCCCTGGAGTGTGCCGCTGCCT
CTGCGAGGCACCCTGAACCAGCCATCCTGGTGAACGCGTCGCTGTCGGTGGTGTCTCGGCTGAGCAAGGTCTCTAACCTT
TTGCAGGTGCATCGCCTGCCCCCTCGAACTATAAGGCGCCTGGAGCTGTTGCTCAGGCGAGAGCCTAAAGTCATGGATCA
AATGGCC-------------------------------------------------------------------------
----------------------------------------------GCCTGATGGGGACGCAGGATCTATGGTGAGCGTT
GCACATGGGAAGGTAGAGATCGGTGTGACTGTGACATTTCGATATACAGAGTCTCTTAAGCTGTTGCTTCTCGACAAGAT
CCACCTGCTCTACCTAGAGGCACTTTCTAAGCTGCCTAGGGATAGCTTGCGCAAACATCACCATTGCAACCTTCTCAGGG
CTGGTTATTGCTATGGTCTGATGGAACCTGTCTCCAACATCATTTTCAACACCATCTGGTATGACTCTGTAATCTCCACG
CAGCATGAGTATGCGCTTGATTTTGAGGTGGACATGATATGCACCAATGCCCTTATGCGAATTGAGTGCTGCTCCCTCTA
TGGCCTTATTGCCTTCCTCCGCCGCCTCTTCCGCCATCTGACTGAGCATGATGCCATCTGGTTCCTGCTCAAGAGCAATG
CTGATGTTTGGTCAGCCATCGACATAGCAGAGCAACATGGTCATCATATGTCTGATGTGTACCTCAATGCCTTTAGGGAA
GCAGCTGTTAATTCATGGCACCCTCACCCTAAAGCGCTGGAGAAATTCATCCTGGAAGCCCTGAACATGAATTCGACTGA
GCTGTCATTGATGCTGACCCATGCAGTCAAGAACTGCAGATTTGAGGGACTAACCATGTCTTTGTCACCCAAATCTTCAC
CTACCAAGTCAGATGAGCAGGTTCAACAACTGGACAAGTTGGCCTCGAGTTCGGAGTTCTTATCTGAAAACCAAAAAATG
TTCATTTCAGAGATTCAGAAAAAATTTAAGGCTGACCAAAATTTCTATGTCAGGAAGGTCAAAGCTGCGTTGAAGAGCTA
CTCCCAGAAACAAGGGGTTCGTGCATTCACCTATGTTGTTGTATTCTTTGTTTTTATACCTGTGTTTTCTTAAACGTCTG
TTTAGTGATTAGCTCCCTTCTCCTGTCTTGCTCTATATAGGTGCACTACGAACTTCATGTTATTTGTGGTGTGAATCCTC
-GTGCGGTCAAGGGTGGAACTGCTGATCTTTTTAAGAAAAAGGGCAAATTTGAATACTCCCACATCAACTTTTGGGCAAC
ACGTGAGGGATCAAATTCTGCTGCCACAGATCCAGTACTGTTCTTCGCTGAATGCAGCAATGATGATGAAGATGACAAGG
AAACACCTCCCCTGTGCGTCCCAGTATTTAGTTCTTGGATATCTGATGGTATGCTCTCAGCTCTCTTTCACACAGTAGGT
ATCTTGTATT-TGTGATTTACATAGTTAGTTGAAATAGAAGTGGTAAAACAAGAGTGCTTGGCTTGTGAGAATT---AGA
ACCTCCTTACTTTGTAGTGCAATTATGTTTATGCTCTGCATGCATATTCCAGAATTGTGTATAGCCCAAGTACTCAAAGC
TTCCCTCGTTCCGTACTAACAAAGACCAGTTACAGTTAGCATGATTAAGTCTCGTACGTTTTCTTTAGTCTCTTAAGGTT
TAAA-----------CAAAGATTAAAAATTAGAAACCTGAAAGGTTTAGACCACTTAAGCATCTCCCTTAATTATTTAGC
AATCTGAAGTTCTGAAAATACACTAGAAGAATGCCCCCTCTGTTGCTGGGGAAATTTGTGCGTAGTCAAAACGCTGGTAA
ACTACAATT-----------------------------TATGAGAAATGGCATTTTCCAAATATGTTTGTATAAGATATA
TAGATTACCAAAAATCTGTGGTATCTCCTCCGAGAAAATTACATCCAGCCATTGAATTGATGGATCCAATGAAATCAATG
AATCAGACTTAATGAAGCTTTGCTCAGTTCTTTTTGGAACACTGGCCCAAACATAGTGATATTTCCACATCCTTGACAGT
GATGGCATGTATGCCTGGCGCAACTTTTAGTCCCACTATAAATATTTTGGCAGATAGTAATGTGT-CCTAGGCAGCCTAC
ATACTCTAAATTTCGGAATCAAGGGGTTCTCTTCATTGGCTTTTAGATCCATCTTTTGCACTTAGCTTTGTGTTTTTC-T
TTTTTTATGAGAAGTCTGATAATATAATTACTTTTGTTTGGAGGAAAGTTCGCTGCTTCCACTGTGAGTTTCTAGTGAAA
AAAATTGTTCACCCATATCATGAATCATATTATGGGTGTTACGACGACTTTGTTGGAATGGCTCGTGGAGAACATAGCAT
TTGTAATGAAGAGATTATCAGTGCATGCGACTTCCATGCTGATATGATGTGCACATTAAAAGAGGATTGGATCTTTTTTG
ATCCCAACATGGATGCTATGATTGCTCGAGCGAATCCCATTAAGAATTGGGCTACGGAAATGCTGAAATGGAAGAACAGA
ATCTTTTGACAGGTGTGTCTCTTGCCTAACTTGGAAATTTTAGTTTTGTGGTTGCATCGATTTGGAAATATTTCTCTCTT
TAC-----------------------------------------------------------------------------
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--------CGTGTTTCAATAAAACTAGAGATAGCCCTATCAGGATATGGTTTTCTCCAGTAATTAAATATGTATTAGTTT
ATCCCATTTTTGTATGATATAACATACTTCGTTCTACTTTGCAGTCATGCTCGGTCTTTTTTTTTTCCGAGACAGATCAG
ATGGACTCTTGAAATTGAGATTCTTGAAGAGCTTTCCTGGGAGCACTTGTTCAAGCTTAGTTAACATTTGCTAGAACTGT
TTATTATATTCTTTTGTTGAAGTATATCTCAACTTCTTAAGTGTGGTGTTAGTTTGTCAACCATGATGTAAATTATCCTT
GATGCTACTCGAGTATGTGGATATCTAATGCCAGGTTTGCATGTGGGCACTTCATCACAAAGCTATACAGAACAGCAACA
ATTTATATGTTGGGCGTTCAGTTCTATTTCCTGGTGCTGCTGGTGGCGGCTGTAGCGGCCGTTCGTCCTGCAGCACCTG-
---TTAGTCATTATAGGGATACTAGCAAAAAGGTCCGTGCGTTGCAACGGGAGAAAAAAAATCCTCTCATATCTTTCCCA
TCTGCAATTTTTTTTGCCAGCTCTTCGGACCTGGGCCTCAGTGCGCCAACAGGTGGGCTTTCTCCATTGGGCCAAAACGG
ATGACAAGTAACGAAACCAAATAGCGTACGTGAAGTTAATTGAAGCGGGACCAGACGAAGCGGGACGAAATCAAAAATAT
CACCTCTTTTTAATAGTAGGTATAGATAATGATATGAAGCAGACATACAACATTGGTCACCAGGTGATCGCCCTAGCAGT
AGCAGTGTGTTTGACAACCCGAAAGCAAGGGAATGGGAATTTGTTAGGAATTAAGATAGTCCCAGTCACATGTTTGATGT
GTGGTAGGAATTCTAGTAGTGGGAATCTGAAAAGATGTTTCATCCCACCAAAATTAACAATGGGACTAAGAAAAAGATAC
ATGGGAATTAGCCTCCTTAATTTATTT-------------------------
>chr3A_1
AAACACCTGAATATTTATTTAAAATGTCGCATACAATTTTTAGTGGAAATGAACATTTATTAACCTATGCGAACATTTTT
TTACATTGTCTGTAATATTTTATTAAATGAGATGAACCTTTTTTT--TGAAATGTGGGAATATTTTCATAAAATGGCATG
TATATTTTTTAGTGTTGCAGATCATTTTTCACATTATGCAAACAATTATTTACATTGTATACACATTTTAGAAAAATCAC
GTACATTTGTTGAAACACAAGAACATTTTTGAAATTTTCAGGAACATTTTAAG-AACTGCACTAACAAA-TTTTATACTA
T--GTTAACCTTTTAAATTCGTATTTTAAAATTTATGAAATACATTTAAAATTTTAGTACATATATGCATTTAACTTAAG
ATAAATAAATAAAATAGGGAAAATAATTCGAGTGTCGTTAGCATGACTAGCCACGTTGTACTGGCCGGCCCACCGCCAAC
GCACCGGTAACAGCGCAGGGAA----CGGTCGGTCAGTTGGATTGGATCAAATACCCCCCAAA-----------------
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>chr3A_798
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-----------------------------------------------------ACTTTTCTGAGTATA--GTTTTGTGCG
GTGCACC---TTGTTCTTCTTATTAGGGTTTTTCTTCCAGGCCTCGTCCTCCCCTATTCTAATCGCCGCCCTTCCCCCAC
CCCCTGCACCACCAAAATCCGAACGAATCAGGTAGCATCCGCCCT-----CGCCGGAGAAGAGAGCAAGTACGCCCGTCC
GTCCGTCC--------ACATGTATGGCAAGCCTGTCCGCCGCATCGGCGACGGCTATGTTGATAACGTTACACCAGAAAC
CGTGAAGGAGGACATACTCCTCCTGCTCGATGACATCCATGGCTTCTACAAGGCGGCGCTCGATCGGTTGCCTGTAAAGA
GGATGCCCGCGCTGGCTCCCTGCCTTCTCAAGGCCGGCGTGGGCTTCGGCTTCCTCGACCCAGTCTCCAATATCATCCTC
AACACCATCGCCTACTTGCAGCGGTTGCCCAGCACCGAGAGTCAACAAGGGGCTACTAGAAATAGAAAGTCGATCTTCTC
CAAGATCTCCACTGACACTCGGGATCGCAGAATTTTCCGGATACTGCTGCCCAGACACATGGCGAACGCCATGACCATCG
CGCGGCTGTCGCTGGAAGGTCTGGTCAGCTTCCTCCTGTTCCACTTCCGCTACCTCGCGGAGACGGAAGCCCTGCGCTAC
CTGCGCCTGGCCAGGGCCGACCTTCTCGCCGCCGTGCATCTCATCGACCAAGATCGTAACAAGTCGTGCTCAGCGTCTAG
CATTGCCAAGATTCACAACAAGCCCGTGTTCGACATTACATCTCCAACCTCCAAGATTGCCCTGGAGTGTGCCGCTACCT
CTGCAAGGCACCCTGAACCGGCCATCCTGGTGAACGCGTCGCTATCGGCGGTATCTCGGCTGAGCAAGGTCTCTAACCTT
TTGCAGGTGCATCGCCTGCCCCCTCGAACTATAAGGCGCCTGGAGCTGTTGCTCAGGCGAGAGCCTAAAGTCATGGATCA
AATGGCCATAAGGCGTCCGCTGAATCTTGCTGGGTCACGTCTCCGTGATGGAAAGGAGGTGAAGAGGGATCTTGCTGGTT
CACCTCTCCATGATGGACAGGAGAAGAAGAGAAAGAGGGTCGAGCCGCCTTACGGGGACACAGGATCTATGGTGAGCGTT
GCACATGGGAAGGTAGAGATCGATGTGACTGTGACATTTAGATACACAGAGTCTCTTAAGCTGTTGCTTCTCGACAAGAT
CCACATGCTCTATCTAGAGGCACTTTCTAAGCTGCCTAGGGATA------------------------------------
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>chr3A_2129
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--------------------------------TCCAACATCATTTTCAACACCATCTGGTATGACTCTGTAATCTCCACG
CAGCATGAGTATGCGCTTGACTTTGAGGTGGACATGATATGCACCAATGCCCTTATGCGAATAGAGTGCTGCTCCCTCTA
TGGCCTTATCGCCTTCCTCCGTCGCCTCTTCCACCATCTGACTGAGCATGATGCTATCAAGTTCCTGCTCAAGAGCAATG
CTGATGTTTGGTCAGCCATCGACATAGCAGAGCAACATGGTCATCATATGTCTGATGTGTACCTCAATGCCTTTAGGGAA
GCAGCTGTTAATTCATGGCACCCTCACCCTAAAGCACTGGAGAAATTCATCCTGTCAGCCCTGAACATGAATTCGACTGA
GTTGTCAACAATGCTGACCCATGCAGTCAAGAACTGCAGATTTGAGGGACTCACCATGTCTTTGTCACCCAAATCTTCAC
CTACCAAGTCAGATGAGCAGGTTCAACAACTGGAAAAGTTGGCCTCAAGCTCGGAGTTCTTATCTGAAAACCAAAAAATG
TTCATTTCAGAGATTCAGAAATTTTTTAAGGCTGACCAAAACTTCTATGTCAGGAAGGTCAAAGCTGCGTTGAAGAGCTA
CTCCCAGAAACAAGGGGTTTGTGCATTCACCTATGTTGTTGTATTCTTTGTTTT-ATACCTGTGTTTGCTTAAA------
--------------------------------------------------------------------------------
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>chr3A_2828
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-----------GCTCCCTTCTCCTGTCTTGCTCTATATTGGTGCACTATGAACTTCAAGTTATTTGTGGTGTGAATCCTC
AGTGCGGTCAAGGGTGGAACTGCTGATCTTTTTAAGAAAAAGGGCAAATTTGAATACTCTCTCATCACCTTTTGGGCAAC
ACGTGAGGGATCAAATTCTGCTGCCACAGATCCAGTACTGTTCTTCGCTGAATGCAGCAATGATGATGAAGATGACAAGG
AAACACCTCCCCTGTGCGTCCCAGTATTTAGTTCTTGGATATCTGATGGTATGCTCTCAGCTCTCTTTCACACAGTAGGT
ATCTTGTATTCTGTGATTTGCATAGTTAGTTGAAATAGAAGTGGTAAAACAAGAGTGCTTGGCTTGTGAGAATTAGAAGA
ACCTCCTTACTTTGTAGTGCAATTATGTTTATGCTCTACATGCATATTCCAGAATTGTGTATAGCCTATGTACTCAAAGC
TTCCCTCTTTGCGTACTAACAGAAACTGGTTATAGTTAGCATGATTAAGCCTCATAC-TTTTTTTAAGTCTCTTAAGGTT
TAAAGATGGGCATCTCAAATATTAGAAATTGAAAACGTGAAAGTATTAGACCACTTAAGCATTTTCCTTAATCATTTAGC
GATCTGAACTTCTGAACATGTACTAGAAGGATGCCCCCTGTGTTGCTGTGGAAATTT----GTAGTTAAAACACTGGTAA
ACTACAATTAGTGTAGCTGGCATTGTAGAAGCATGAATTATTAGAAATGCCATTTTCCAAATATGTTTGTATAAGATATA
TAGATTACCCAAAATCTGTGGTGGCTCCTCCGAGAAAATTACATCCAGTCATTGAATTGTTGG-TCCAATGAAATCAATG
AATCAGAATTAATGAAGCTTTGCTCAATTCTTTTCCGAACACTGGGCCAAACACAGTGATATTTCCACATCCTCGACAGT
GATGGCATGTTTGCCTGGTGCAATTTTTAGTCCCACCATAACTATTTTGGTGGATAGTAATGTGTCCCTAGGCAGCTTAC
GTACTCTAAATTTCCGTATCAATGGGTTCTCTTCATTGGCTTTTAGATCCATCTTTTGCACTTAGCTTTGTGTTTTTC-C
TTTTTTATGAGAAGTCTGATAATATAATTACTTTTGTTTGGACGAAAGTTCGTTGCTTCCACTGTGAGTTTCTAGGGAAA
AAAATTGTTCACCCATATCATGAATCATATTATGGGCGTTACGAGGACTTTGTTGGAATGGCTCATGGAGACCATAGCAT
TTGTAATGAAGAAATTATCAGTGCATGCGACTTCCATGCTGATATGATGTGCACATTAAAAGAGGATTGGATCTTTTTTT
ATCCCAACATGGATGCTATGATTGCTCGAGCGAATCCCATTAAGAATTGGGCTACGGAGATGCTGAAATGGGAGAACAGA
ATCTTTTGACAGGTATGTCTCTTGCCTAACTTGGAAATTTTAGTTTTGTGGTTGCATCGAGGAGGAAATATTTCTCTC--
--------------------------------------------------------------------------------
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------AGCGTGTTTCAATAAAACTAGAGATAGCCCTATCAGGATATGGTTTGCACCAATAATTAAATATGTATTAGTTT
ATCCCATTTTTGTATGATATAACATACTTTGTTCTACTTTGCAGTCATGCTCGATC-TTTTTTTTTCTGAGATAGATCAG
ATGGACTCTTGAAATTGAGATTCTTGAAGAGCTTTCCTGGGAGCACGCGTACAAGCTTAGTTAACATTTGCTCGAACTGT
TTATTATATTCTTCCGTTGAAGTGTATCTCAACTTCTTAAGTGTGGTGTTAGTTTGTCAACCATGATGCAAATTATCCTT
GATGCTACTCGAGTATGTGGATATCTAATGTCAGGTTTCCATGTGGGCACTTCATCACAAAGCTATACAGAACAACAACA
ATTTACATGTTGGGCGTTCAGTTCTATTTCCTGGTGCTGCTGGTGGCGGCAGTAGCGGTCGTTCGTCCTGCAGCACCTG-
---TTAGTCACTATATAGGGAT----------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------ATAATGATATGAAGCAGACGTACAACAATGGTCACCAGGTGATTG-CCTAGCAGT
AGCAGTGTGTTTGATAGCGCGAAAGCAAGGGAATGGGAATTTGCAAGAGATTAAGATAGTCCCAATCTCATGTTTGGTGT
GTGATGGGAATTCTAGTCGTGGGAATCTGAAAAGATGTTTCATCCCACCAAAATTAACAATGGGACTAAGAAAGAGATAT
GTGGGAATTAGCCTCCTTAATTTATTTTTCGTCAACTTTTTTGCACCCACCC
>SNPs
---S-----------S------------------S--S-------------S-S----S-----------S---------
-----------------------------------------S---SS---------------------------------
-------------S------------------------S---S-----------------------------S---S---
SS----------------------------S-------------------------S-----------------------
--------------------------------------------------------------------------------
-------SS-----SS-------------S------S------------------------------S---------S--
----------------------SSSS-------------------------------------------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS---------------------SSSSSSSSSS----S-------------S----SSSS
-SSSS--SSS----S----------------------SS----------------------------------S---SS-
--------------------S-------------------S----SSSSS--------------------S---------
--------SSSSSSSS----------------------------------------------------------------
-------------------------------------------------------------------S------------
----------------------------------------------------------------------S-----S---
-----------------------------------------------------S--------------------------
--------------------------------------------S-------S-----------SS--S-----------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------S---------S-
-------------------------------------------------------S------------------------
---------------------------------------------------------------------------S----
-----------------------------------------------------------------------S--------
-----------------------------------------------------------S--------------------
-----------------S-S------------------------------------------------------------
-------------------------------------S------------------------------------------
------------------S------------S-S----------------------------------------------
-------------------S------------------------------------------------------------
--------------S-----------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
---------------------------------------------------SS--------S-------S----------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S------------------------------------S--------------------
--S-----------S----------S------S--S-------S-------S-----------------S----------
-S------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
----------------S--S--------------------S------------S--------------------------
---------------------------------------------------------------S----------------
----------------------------------S---------------------------------------------
-------S------------------------------------------------------------------------
---------------S--------------S---------------------------------------------S---
----------------------------------------------------S---------------------------
------------------------S-------------------------------------------------------
---------------S-------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S----S
---------------SS-----S--------------SS--------------------S------------------S-
-------------S----------------S---------------------------------S---------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
------------------------------------------------S-S-----------S-----------------
--------------------------------------------------------------------------------
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS------------S-------------------------------------------------------------
-----------S---------------S-----------S----------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S-----------S
SSS--------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------S-------------------------------S---------
---------------------------------------------------------------S-----S---SS-----
-----------------------------S-------S------S-------
>forward_568
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--------------------------------------------------------------------ACGGCATGTACA
ATGGTCGA------------------------------------------------------------------------
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>reverse_1900
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-----------------------------------------------------------AGAAGAGGGATCTTGCTGGT-
--------------------------------------------------------------------------------
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----------------------------------------------------
>forward_1756
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--------------------------------------------------------CGGCTGAGCAAGGTCTCTAG----
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----------------------------------------------------
>reverse_2950
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---------------------------------------------------------------------CGTGAATCCTC
ATGCGGTCA-----------------------------------------------------------------------
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----------------------------------------------------
>forward_2622
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------------------------------------------TGAGGGACTTGCCATGTCTG------------------
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----------------------------------------------------
>reverse_4484
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---TTGGAAATAGCTCTGGGCCG---------------------------------------------------------
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----------------------------------------------------
