>input_sequence_22342
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--------------------------------------------ATGCTAGCTTCTGCGATGGATTACCTGAGATCTTGC
TGGGGTCCGACGTCGTCGCCGGACGGGCGCCCTCGCAAGGGGGTGGATGCGGCCGGCCGGCAGGACGGGCTCCTGTGGTA
CAAGGACGCAGGGCAGCTCGTCGCCGGCGAGTTCTCGATGGCCGTGGTCCAGGCCAATAACCTGCTGGAGGACCACAGTC
AGGTAGAATCTGGGTCGCTGAGCACCACGGATCCCGACCTGCAGGGCACCTTCGTCGGCGTCTATGATGGCCATGGTGGA
CCGGAGACGGCACGCTACATCAATGACCACATGTTCAACCATCTGAAGGGTAATACCTCAACCGTTGCTGCGGCTCTCCT
GTTGTAGAACTTAAAC-------------------------------TAGAAAGGATTTTACATCAAATGTCAGTCTAGC
TATGCTATACGATCCATAGTTGTATTGTTTCCCATTGCTAGACCTGCAAGTGTCTGTGATTGATGCTGATTGTTCTCAGC
CATTTTTCTTCCCATGGAAGTAGATATTTATTGGATGCCTGCATTGCATAGGATATAGTTCTGCTTGAAGTAAAACAGAG
AACAAACAAGCGCAATTTAAATGATGTTTTGTTCAGAGCAGTTGCCTACTTTGTACTATATTCGATCCTTGGTTGATTTA
TTTTACT-------TCCAAGTATAATGGAAGCACATTTATTGTTGACTGTAGAGTGAATAAATGATAGTGTCGTTTACTC
ACCTTCACGTCATACTATGACATGTTTGAACCACATGTCAATCTCCATTAGTTCCCTCACATGATGAACTTCCTTTTTCA
GTATATGCATCTGAGCAGAAGTGCATGTCAGTGGAAGTAATTCGGAAGGCTTTCCGAGCGACCGAGGAGGGATTTCTCTC
TCTGGTCAGTAATCAATGGTCGGTGAGGCCGCAATTAGCGGCGGTAGGCTCTTGCTGTCTAGTTGGTGTGATTTGTGCTG
GAACTCTCTATGTTGCAAATGTTGGGGACTCCCGTGCTATTCTGGGGAGACTTGTCAAGGGAACTGGAGAGGTTGTGGCT
ATGCAGCTCTCAGCAGAACATAATGCATCCTTTGAGGAGGTTAGGCGAGAGATGCAGGCAATGCATCCTGATGATCCCCA
CATTGTGATCCTGAAGCACAATGTTTGGCGTGTGAAGGGTATTATTCAGGTAAATGTCCGGAGTTCAAAAATTGCAACTG
GCATGTGATCCATAGCTTGCTTTATACAGTCTTCAGACATTAGGCTTAACTTTTCATTATAGCCATAACTGCATTTAAAT
GCTGTGTCCCTATGCTTCTGTTAGAATTGTTGCTGCATGTTTTTACATTAGGCAAATTCTCAGTTATCAACTATACTTAG
GTGTTCTTGTTAGATA-TTTTTTACCAGTGTATACAATCTGCAATAATGCAAGAGTCCGAGTCTTAAAATTAGGTACTCT
CTCCGTTCCAAAATAGATGACTCAACTTTGTACTAACTTTATACTACAGTTAGTACAAAGTTGAGTCATCTATTTTGGAA
CGGAGGGAGTATTAGCCAAGGCAAATACCATATTCAGCTGTTGAATGCATTTCCCTTGATGTTGATCCCGCAAATAAATT
ATTATGTATGCCTGTGTTTCTTAAAACAGATATGAGGTGTGCTAACCATGTGCAATATGGTCATGTGCATTTCCTAGACG
AATCAC-TTAATCTGCTGTTGTCTCTTGCATAGCGTTACTGCTTAGTCCCTTCCCAAATGCCATGCAATTGCTTCTGCTG
TGTATCTCACATGGTAGGATAATGTGTTGCAGATAACAAGGTCCATTGGAGATGTGTATCTGAAGAGACCAGAATTCAAC
AGAGAACCTTTGCATAGCAAGTTTCGGCTTCCAGAAACTTTCCGGAGACCGCTTCTTAGTTCTGAGCCAGCAATTACTGT
ACACCAAATACAGTTAACTGATCAGTTCATCATTTTTGCATCTGATGGACTCTGGGAGCATCTTAGTAACCAAAAAGCTG
TTGAGCTAGTCCACAGTAGTCCTCGTAATGTATGTGCTCTTATCTTATGTTTAGTTTGTGTTACTGGGTTCTTTGAAAGC
TAAGTGCTAGTTCATGCATTCTTTTTCCAAACAACAAAGTACGTATTTCTGCTTTTGTAGTAATTTCATCGTTCTTTGGA
TGATGTTTCTGTTGAGGTAAGTGGACATATTTTCTTTCTTATAAGGAATTAAGGGAACACTAGATATGAACATCTTTAGA
ACTCATTCTAAGTTTTGATAACATGTAACAGTTCTGTAAGTACATAGTATAGACATATTATCATGCTAGGGTATATTAGA
TTTTGTTCGCCTGCCATGATGGTTGCAACCGACTTAAATGGCACCAAGTTATCGATTTTGTAGCACTTCCGCAGTTGTTG
GTGTTTTAGGTACTTAAATTTGTCTGTAGCAAAATGTTGTTTGAGATAACAACAGTGGTTTAGTCCCTAGAAGTTTGTGT
TTCTCTGCCGGTCCTGGATTAGGTCATGTCTGCCTAATGTGGTATAGGTTATATTGTTGATTATGTATGTCCCCCTTTTC
ATGTCACT----------------TCGCTG-ATTGAAGGTTACATGCTTAAACTTCAGTCTGCAAATGCCTGGTTGTTCG
CTTATTGAGGAGATATTTTGTA----------------------GCAGTTATCATCTTCAGAGCTC--------------
------------------------------------------------------------------------------CT
TGTTTTTTTTCCGAGGGAACCATTTTTAGATCTCTTAAACATCTGCATTCTTCATTGAAGCATTGTGAATGAGCTACTTT
ACAACTGATTCATTTATATTAATCACACCTTTCCTGAACTATGGCGATTGTCACCTCACCAACTAACCAATGTAGACATG
TTACTGAATCTCACTTCACATTTCAGTTTGCAAACAGACCATGTAGTAGGACCCAGCTTCATTATGTCTAAACAATCTTG
TTCTCATATTCTACT--AGTCTTGTGTTCCTTCATTCATTTCGTAGAACAGCATTGCTTTCTTATTTTG---TTAATGTT
ATCGTAACTTG-TATGTTTCAGGGGATTGCTCGAAAGCTAGTGAAGGCTGCAATGCAGGAAGCAGCAAAGAAGAGGGAGA
TGCGGTATTCAGATCTCAAGAAAATTGACCGTGGAGTGAGGCGCCACTTTCATGATGATATAACGGTCGTTGTGGTATTT
TTCGATTCGAATGCCATAGCCATGGATGCCTGGAGCCGTCCCACAGTTTCTCTGAGAGGTGGCGGCGTTGCCCTCCCAGC
AAATTCCCTTGCTCCATTCTCAGGTTCCTAG-------------------------------------------------
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--------------------------------------------------------------------
>chr1A_1_TraesCS1A01G205300
CAAACCCTAGAGTCGCCGCCAGAAGCGCCTTAGGGTTTCGACGAAAAAGTCGGTCGAGCGAGCGAACATAAAAAAACCTT
TTTCTTAACAGGTGCCCATATGAATAAAGTATATGTACATGCGTTTGTAGAGGCGATCGTCAGTGTGTACGCATGAACGT
TTGATTTGTATCATGCTTCTTTTTATAGTTTATAAACAAAAAACTTTTTTCTTCGTGTGTAAAGATAAGAAAGGCAGCCA
GACAAAACAGGGGAGAGATTAATGGAAGCATTCCACGAAATAGTCACCACCCCGGAATGAAATTAGGTCCTATCGCCTTT
GCCATTGCCTTGCTGGCCCCGA-CCCCCCTCGCTCTCTCCTTGGGTTGCCTTGTTCGTCTTCTCTCTTGCTTGCTAGTCC
TCTCTCC--CTCTCTCTTTGCTGTGGAGCGGAGAAGATAGAGAGATTCCCTGATCTGCTCGTCGATCGAGCCTGCCCTGC
CTGCCTGCAAAATTTGGCA-GCGCGAGAAGGGAGACCGAAAAGGAGAGCGGAAAAGCGCATCTTATTTTAGTCTCCCCGC
CTCAGCTTCGCGGTTGCTTCGTCTGGATCCCGGAGAGGAGCCCACCTTGTTCCATCAAAACCCAATCTTCCGCTTGCTCG
AGATCGATTGGTTTCCAGATCCAAGCCCGCCCCTCCCTCGTTGCGAGATCGCAGGAAATCTGGGCGCGCGGCTCGGCAGG
AAGCTAGCCATCCAAGAAAAAGGTGAGTTGTTCTTTTCTTGTTTGGTCCCTCGTCTTGCAATGCGTTTAGGGTGTGGTCG
TTCTTGGCGATCTCTCCCCCTTCGATCGCGCAGCGTCTGCCGTGGATTGATCGGGCTCTTGATCTTGGTGTTTGTGCTTG
TGTTGGTTGGCTTCGATGGCAGATTTGGCGAGGCGAAGGAAAGGGGAGAGGATATCGGGAGAGGAGGCGAATAGACATGG
CTTTTGTGAGGCAGCGGGCGATGGGGAGGTGGCGGAGATGAGGGATGCTAGCTTCTGCGATGGATTACCTGAGATCTTGC
TGGGGTCCGACGTCGTCGCCGGACGGGCGCCCTCGCAAGGGGGTGGATGCGGCCGGCCGGCAGGACGGGCTCCTGTGGTA
CAAGGACGCAGGGCAGCTCGTCGCCGGCGAGTTCTCGATGGCCGTGGTCCAGGCCAATAACCTGCTGGAGGACCACAGTC
AGGTAGAATCTGGGTCGCTGAGCACCACGGATCCCGACCTGCAGGGCACCTTCGTCGGCGTCTATGATGGCCATGGTGGA
CCGGAGACGGCACGCTACATCAATGACCACATGTTCAACCATCTGAAGGGTAATACCTCAACCGTTGCTGCGGCTCTCCT
GTTGTAGAACTTAAAC-------------------------------TAGAAAGGATTTTACATCAAATGTCAGTCTAGC
TATGCTATACGATCCATAGTTGTATTGTTTCCCATTGCTAGACCTGCAAGTGTCTGTGATTGATGCTGATTGTTCTCAGC
CATTTTTCTTCCCATGGAAGTAGATATTTATTGGATGCCTGCATTGCATAGGATATAGTTCTGCTTGAAGTAAAACAGAG
AACAAACAAGCGCAATTTAAATGATGTTTTGTTCAGAGCAGTTGCCTACTTTGTACTATATTCGATCCTTGGTTGATTTA
TTTTACT-------TCCAAGTATAATGGAAGCACATTTATTGTTGACTGTAGAGTGAATAAATGATAGTGTCGTTTACTC
ACCTTCACGTCATACTATGACATGTTTGAACCACATGTCAATCTCCATTAGTTCCCTCACATGATGAACTTCCTTTTTCA
GTATATGCATCTGAGCAGAAGTGCATGTCAGTGGAAGTAATTCGGAAGGCTTTCCGAGCGACCGAGGAGGGATTTCTCTC
TCTGGTCAGTAATCAATGGTCGGTGAGGCCGCAATTAGCGGCGGTAGGCTCTTGCTGTCTAGTTGGTGTGATTTGTGCTG
GAACTCTCTATGTTGCAAATGTTGGGGACTCCCGTGCTATTCTGGGGAGACTTGTCAAGGGAACTGGAGAGGTTGTGGCT
ATGCAGCTCTCAGCAGAACATAATGCATCCTTTGAGGAGGTTAGGCGAGAGATGCAGGCAATGCATCCTGATGATCCCCA
CATTGTGATCCTGAAGCACAATGTTTGGCGTGTGAAGGGTATTATTCAGGTAAATGTCCGGAGTTCAAAAATTGCAACTG
GCATGTGATCCATAGCTTGCTTTATACAGTCTTCAGACATTAGGCTTAACTTTTCATTATAGCCATAACTGCATTTAAAT
GCTGTGTCCCTATGCTTCTGTTAGAATTGTTGCTGCATGTTTTTACATTAGGCAAATTCTCAGTTATCAACTATACTTAG
GTGTTCTTGTTAGATA-TTTTTTACCAGTGTATACAATCTGCAATAATGCAAGAGTCCGAGTCTTAAAATTAGGTACTCT
CTCCGTTCCAAAATAGATGACTCAACTTTGTACTAACTTTATACTACAGTTAGTACAAAGTTGAGTCATCTATTTTGGAA
CGGAGGGAGTATTAGCCAAGGCAAATACCATATTCAGCTGTTGAATGCATTTCCCTTGATGTTGATCCCGCAAATAAATT
ATTATGTATGCCTGTGTTTCTTAAAACAGATATGAGGTGTGCTAACCATGTGCAATATGGTCATGTGCATTTCCTAGACG
AATCAC-TTAATCTGCTGTTGTCTCTTGCATAGCGTTACTGCTTAGTCCCTTCCCAAATGCCATGCAATTGCTTCTGCTG
TGTATCTCACATGGTAGGATAATGTGTTGCAGATAACAAGGTCCATTGGAGATGTGTATCTGAAGAGACCAGAATTCAAC
AGAGAACCTTTGCATAGCAAGTTTCGGCTTCCAGAAACTTTCCGGAGACCGCTTCTTAGTTCTGAGCCAGCAATTACTGT
ACACCAAATACAGTTAACTGATCAGTTCATCATTTTTGCATCTGATGGACTCTGGGAGCATCTTAGTAACCAAAAAGCTG
TTGAGCTAGTCCACAGTAGTCCTCGTAATGTATGTGCTCTTATCTTATGTTTAGTTTGTGTTACTGGGTTCTTTGAAAGC
TAAGTGCTAGTTCATGCATTCTTTTTCCAAACAACAAAGTACGTATTTCTGCTTTTGTAGTAATTTCATCGTTCTTTGGA
TGATGTTTCTGTTGAGGTAAGTGGACATATTTTCTTTCTTATAAGGAATTAAGGGAACACTAGATATGAACATCTTTAGA
ACTCATTCTAAGTTTTGATAACATGTAACAGTTCTGTAAGTACATAGTATAGACATATTATCATGCTAGGGTATATTAGA
TTTTGTTCGCCTGCCATGATGGTTGCAACCGACTTAAATGGCACCAAGTTATCGATTTTGTAGCACTTCCGCAGTTGTTG
GTGTTTTAGGTACTTAAATTTGTCTGTAGCAAAATGTTGTTTGAGATAACAACAGTGGTTTAGTCCCTAGAAGTTTGTGT
TTCTCTGCCGGTCCTGGATTAGGTCATGTCTGCCTAATGTGGTATAGGTTATATTGTTGATTATGTATGTCCCCCTTTTC
ATGTCACT----------------TCGCTG-ATTGAAGGTTACATGCTTAAACTTCAGTCTGCAAATGCCTGGTTGTTCG
CTTATTGAGGAGATATTTTGTA----------------------GCAGTTATCATCTTCAGAGCTC--------------
------------------------------------------------------------------------------CT
TGTTTTTTTTCCGAGGGAACCATTTTTAGATCTCTTAAACATCTGCATTCTTCATTGAAGCATTGTGAATGAGCTACTTT
ACAACTGATTCATTTATATTAATCACACCTTTCCTGAACTATGGCGATTGTCACCTCACCAACTAACCAATGTAGACATG
TTACTGAATCTCACTTCACATTTCAGTTTGCAAACAGACCATGTAGTAGGACCCAGCTTCATTATGTCTAAACAATCTTG
TTCTCATATTCTACT--AGTCTTGTGTTCCTTCATTCATTTCGTAGAACAGCATTGCTTTCTTATTTTG---TTAATGTT
ATCGTAACTTG-TATGTTTCAGGGGATTGCTCGAAAGCTAGTGAAGGCTGCAATGCAGGAAGCAGCAAAGAAGAGGGAGA
TGCGGTATTCAGATCTCAAGAAAATTGACCGTGGAGTGAGGCGCCACTTTCATGATGATATAACGGTCGTTGTGGTATTT
TTCGATTCGAATGCCATAGCCATGGATGCCTGGAGCCGTCCCACAGTTTCTCTGAGAGGTGGCGGCGTTGCCCTCCCAGC
AAATTCCCTTGCTCCATTCTCAGGTTCCTAGCC-TTTCACTGGAGTCAAGAAGACACGAAGGCCAGAAAAGAAATGG---
TGAAGAAGACAAGAAGAGCAGCAGCCACGGTCAAGTGTAGTGCGTTTCCTGTGCGTTCTCGCAACAAAAAAAAAGACCTT
TTAGATTCAACCTGGTTACTAGTGTACTGATAGCGGCAAGGTATAAGATTAGATTATTCTTAGTGTACATTCTCCGGATC
GTCTTGTGATAATAGTTCATCTCATCACCATTTCATTTTGTTTAGCCCCTCACAAAGTGCTGCATCTCAAGGCTGGCTAA
TCTTGGACATGTAGCAGGTTGCTTTCTTGATGCCTTAATCTGCTGAGCTCTGATCAACACGATCTACAACGTTATTCTGT
TGACAAGT------CACATGTGAACTTGCACATA--TTGAACGGTTCTTGTCACATCGTTCG------------------
--------------------------------------------------------------------------------
-----------------------GAAAGCAAGCATGATAAACCTAAGATCTTGCAGCATCGGTTTTCTGTTGCCAAGAAT
AGCCAAATCTGGTGCCAATCT-----------------------------------------------------------
-------------ATTAAAAAGCAGATGAACT------------------------GACGTACTCGTATAATTTATGGCA
ATGAAACATCACAGCATATTACTCACTCTGTTATCTACTACTACAAAACATGAACACAC--AGAGTTTCTCCCTAACCCA
ACAGGCACACCTCTGCCCTTCGAGGGCTTGCTCCTTACCGGAGGCCAGAGAAGCAAAAGTGTTTGCCACCTTCAGAATGA
TGAGCTCTCTCACCATCTTATGA---GCCTTCACTGTGAGTTCAGGGACCGAGCAACTTCTTCCACCAGGCGTACCCTAA
CAAAACAACGGAGATCACAAAGCAGCCTGACGATGTACCTCCGACAAATGGCCAAAAGAAGCTGCCATCTG---TGTCAT
AAAAATGGCATGGAATGTTCATCGCAAATGCCCCAGCTATGAAGGTATTGACGGCTATGCCGAAAGACGCGATGGTCAGC
GTAAGCTGAAGTTGGATCAGTTCATTTCGCTGGTTGTCGAGTTGAATGTTGACGTAGTCTTCTGTGTC
>chr1D_72
AAAATCA------------------------------------------------------------------------T
TTTTTGAACAAGTGCCCACATGAATAGAGTATAGGTACCTGCGTTTGTAGAGGTGATCGTCAGTGTGTACGTGTGAACGT
TTGATTTGTATCATGCTTCTTTTTATAGTTTATAAACAAAAAGCCTTTTTCTTCGTGTGTAT-GATAAGAAAGGCAGTCA
GAGAAAACAGGGGAGAGATTAATGGAAGCATTCCACGAAATAGTCACCACCCCGGAATGAAATTAGGTCCTATCGCCTTT
GCCATTGCCTTGCTGGCCCCGACCCCCCCTCGCTCTCTCCTTGGGTTGCCTTGTTCGTCTTCTCTCTTGCTTGCTAGTCC
TCTCTCTCTCTCTCTCTTTGCTGTGGAGCGGAGAAGATAGAGAGATTCCCTGATCTGCTCGTCGATCGGGCCTG-CCTGC
CTGCCTGCAAAATTTGGCA-CCGCGAGAAGGGAGACCGAAAAGGAGAGCGGAAAAGCGCATCTTATTTTAGTCTCTCCGC
CTCAGCTTCGCGGTTGCTTCGTCTGGATCCCGTAGAGGAGCCCACCC-GTTCCACCAAAACCCAATCTTCCGCTTGCTCG
AGATCGATTGGTTTCCAGATCCAAGCCCGCCCCTCCCTCGTCGCGAGATCGCAGGAAATCTGGGCGCGCGGCTCGGCAGG
AAGCTATCCATCCAAGAAAAAGGTGAGTTGTTCTTTTCTTGTTTGGTCCCTCGTCTTC-AATGCGTGTAGAGTGTGGATG
TTCTTGGCGATCTCTCCCCCTTCGATCGCGCAGCGTCTGCCGTGGATTGATCGGGCTCTTGATCTTGGTGTTTGTG----
--TTGGTTGGCTTCGATGGCAGATTTGGCGAGGCGAAGGAAAGGGGAGAGGATATCGGGAGAGAAGGCGAATAGACATGG
CTTTTGTGAGGCAGCGGGCGATGGGGAGGTGGCGGAGATGAGGGATGCTATTGTCTACGATGGATTACCTGAGATCTTGC
TGGGGTCCGACGTCGTCGCCGGACGGGCGCCCTCGCAAGGGGGTGGATGCGGCCGGCCGGCAGGACGGGCTCCTGTGGTA
CAAGGACGCAGGGCAGCTCGTCGCCGGCGAGTTCTCGATGGCCGTGGTCCAGGCCAATAACCTGCTGGAGGACCACAGTC
AGGTGGAATCCGGGTCGCTGAGCACCACGGATCCCGACCTGCAGGGCACCTTCGTCGGCGTCTATGATGGCCATGGTGGA
CCGGAGACGGCACGCTACATCAATGACCACATGTTCAACCATCTGAAGGGTAATACCTCAACCGTTGCTGCGGCTCTCCT
GTTGTAGAACTTAAACTAGAAAGGATTTTCACCCGCAAAAAAAAACCTAGAAAGGATTTTACATCAAATGTCAGTCCAGC
TATGCTATACGATCCATAGGTGTATCGTTTCCCATTGCTAGACCTGCAAGTGTCTGCAATTGATGCTGATTGTTCTCAGC
CATTTTT----CCATGGAAGTAGATATTTATTGGATGCCTGCATTGCATGGGATATGGTTCTACTTGTAGTAATACAGAG
AACAAACAAGCGCAATTTAAATGCTGTTTTGTTCAGAGCAATCACCTAGTTTATACTATATTCGATCCTTGGTTGATTTA
TTTTACTCCAAAAGTCCAAATATAATGGAAGCGCATTTATTGTTGACTGTAGAGTGAATAAATGATAGTGTCGTTTACTC
ACCTTCGCGTCATATTATGATATGTTTGAACTACATGGCAATCTCCATTAGTTCCCTCACATGATGAACTTCCTTTTTCA
GGATATGCATCTGAGCAGAAATGCATGTCAGTGGAAGTAATTCGGAAGGCTTTCCGAGCGACCGAGGAGGGATTTCTCTC
TCTAGTCAGTAATCAATGGTCGGTGAGGCCGCAATTAGCAGCGGTAGGCTCTTGCTGTCTAGTTGGTGTGATTTGTGCTG
GAACTCTCTATGTTGCAAATGTTGGGGACTCCCGTGCTATTCTGGGGAGACTTGTCAAGGGAACTGGAGAGGTTGTGGCT
ATGCAACTCTCAGCAGAACATAATGCATCCTTCGAGGAGGTTAGGCGAGAGATGCAGGCAATGCATCCTGATGATCCCCA
CATTGTGATCCTGAAGCACAATGTTTGGCGTGTGAAGGGTATTATTCAGGTAAATGTCCGGAGTTCAAAAATTGCAACTG
GCATGTGATCCATAGCTTGCTTTATACAGTCTTCAGACATTAGGCTTAACTTTTCATTATAACCATAACTGCGTTTAAAT
GCTGTGTCCCCATGCTTCTGTTAGAATTGTTGCTGCATGTTTTTACATTAGGCAAATTCTCAGTTATCAACTATACGTAG
GTGTTCTTGTTGGCTATTTTTTTACCTGTGTATACAATCTGCAATAATGCAACGGTCTGAGTCTTGTAATTAG-------
--------------------------------------------------------------------------------
--------GTATTAGCCAAGACAAATACCATATTCAGCTGTTGAATGCATTTCCCTTGATGTCGATCCCGCAAATAAATT
ATTATGTACGCCTGTGTTTCTTAAAACAGATATGAGGTGTTCTA--------CAATATGGCCATGTGCATTTCCTAGATG
AATCACTTTAATCTGCTGTTGTCTCTTGCATAGCGTTACTGCTTAGTCCCTTCCCAAATGCCATGCAATTGCTTCTGCCG
TGTATCTCACATGGTAGGATAATGTGTTGCAGATAACAAGGTCCATTGGAGATGTGTATCTGAAGAGACCAGAATTCAAC
AGAGAACCTTTGCATAGCAAGTTTCGGCTTCCAGAAACTTTCCGGAGACCGCTTCTTAGTTCTGAGCCAGCAATTACTGT
ACACCAAATACAGTTAACTGATCAGTTCATCATTTTTGCATCTGATGGACTCTGGGAGCATCTTAGTAACCAGAAAGCTG
TTGAGCTAGTCCACAGTAGTCCTCGTAATGTATGTGTTCTTATCTTATGTTTAGTTTCTGTTACTGGGTTCTTTGAAAGC
TAAGTGCTAGTTCATGCATTCTTTTTCCGAACAACAAAGTACGTATTTCTGCTTTTGTAGTAATTTCATCGTTCTTTGGT
TGATGTTTCTGTTGAGGTAAGTGGACATATTTTCTTTCTTATAAGGAATTAAGGGAACACTAGATATGAACATCTTTAGA
AGTCGTTCTAAGTTCTGTTAACATGTAACAGTTCTGCAAGTACATAATATAGACATATTATCATGCTACGGTATATTAGA
TTTTGTTCGCCTGCCACGATGGTTGCAACCGACTTAAATGGCACCAAGTTATTGATTTTGTAGCACCTCCGCAGTTGTTG
GTGTTTTAGGTACTTAAATTTGTCTGTAGCAAAATGTTGT------TAACAACAGTGGTTTAGTCCCTAGAATTTTGTGT
TTCTCTGCCGGTCCTGGATTAGGTCATGTCTGCCTAATGTGGTATAGGTTATATTGTTGCTTATGTATGTC-CCCTTTTC
ATGTCACT----------------TCGCTGAATTGAAGGTTACATGCTTAAACTTCAGTCTGCAAATGCCTGGTTGGTCG
CTTATTGAGGAGATATTTTGTA----------------------GAAGTTATTATCTTCAAAGCTCCTCCATTCTCGATG
ATGAATCGATTTGATAGATCAGATATTGTTATTCCAAATATTGATCCGATTCAGTATCATCAGAATGACAAAAGCTGACT
TGTTTTTTTT-CGAGGGAACCATTTTTAGATCTCTTCAACATCTGCATTCTGCATTGAAGCATTGTGAATGAGCTACTTT
ACAACTGATTCATTTATATTAATCACACCTTTCCTGAACTATGGGGATTGTCACCTCACCAACTAACCAATGTAGACATG
TTACTGAATCTCACTTCACATTTCAGTTTGCAAACAGACCATGTAGTAGGACCCAGCTTCATTATATCTAAACAATCTTG
TTCTCATATTCTACTAGAGTCTTGTGTTCCTTCATTCATTTCGTAGAACATCATTGTTTTCTTATTTTG---TTAATGTT
ATCGTAACTTG-TATGTTTCAGGGGATTGCTCGAAAGCTAGTGAAGGCTGCAATGCAGGAAGCAGCAAAGAAGAGGGAGA
TGCGGTATTCAGATCTCAAGAAAATTGACCGTGGAGTGAGGCGCCACTTTCATGATGATATAACGGTCGTTGTGGTATTT
TTCGATTCGAATGCCATAGCCATGGATGCCTGGAGCCGTCCCACAGTTTCTCTGCGAGGTGGCGGCGTTGCCCTCCCAGC
AAATTCCCTTGCTCCATTCTCAGGTTCCTAGCC-TTTCACTGGAGTCAAGAAGACACGAAGGCCAGAAAAGAAATGG---
AGAAGAAGACAAGA---GCAGCAGCCACGGTCAAGTGTAGCGCGTTTCCTGTGCGTTCTCGCAAG--AAAAAAAAACCTT
TTAGATTCAACCTGGTTACTAGTGTACTGATAGCGGCAAGGTATAAGATTAGATTATTCTTAGTGTACATTCTCCGGATC
GTCTTGTGATAATAGTTCATCTCATCACCATTTCATTTTGTTTAGCCCCTCACAAAGTGCTGCATCTCAAGGCTGGCTAA
TCGTGGACATGTAGCAGGTTGCTTTCTTGATGCCTTAATCTGCTGAGCTCTGATCAACACGATGTACGACGTTATTCTGT
TGACATGT------CACATGTGAACTTGCACATATATTGAACGGTTCTTGTCACATCGTTTG------------------
--------------------------------------------------------------------------------
-----------------------GAAAGCAAGCATGATAAACCTAAGATTTTGCAGCATCGGTTTTCTGTTGCCAAGAAC
AGCCAAATCTGGTGCCAATCT-----------------------------------------------------------
-------------ATTAAAAAGCAGATGAACT------------------------GACGTACTTGTATAATTTATGGCA
ATGAAACATCACAGCATATTACTCACTCTGTTATCTACTACTACAAAACATGAACACACATAGAGTTTCTCCCTAACCCA
ACAGGCACACCTCTGCCCTTTGAGGGCTTGCTCCTTACTGGAGGCCAGAGAAGCAAAAGTATTTGCCACCTTCAGAATGA
TGAGCT-TCTCACCATCTTATGACTTGCCTTCACTGTGAGTTCAGGGACCAAGCAACTTTTTCCACCAGGCGTACCCTAA
CAAAACGACGGAGATCACAAAACAGCCTGACGATGTACCTCCGACAAATGGCCAAAAGAAGCTGCCATCTGTGATGTCAT
AAAAGTGGCATGGAATGTTCATCGCAAATGCCCCAGCTATGAAGGTATTGACGGCTATGCCGAAAGACGCAATGGTCAGT
GTAAGCTGAAGTTGGATCAGTTCATTTCGCTGGTTGTCGAGTTGAATGTTGACGTAGTCTTCTGTGTC
>chr1B_170
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------ATCATGCTTCTTTTTATAGTTTATAAACAAAAATCCTTTTTCTTCGTGTGTAA-GATAAGAAAGGCAGCCA
GAGAAAACAGGGGAGAGATTAATGGAAGCATTCCACGAAATAGTCACCACCCCGGAATGAAATTAGGTCCTATCGCCTTT
GCCATTGCCTTGCTGGCCCCGACCCCCCCTCGCTCTCTCCTTGGGTTGCCTTGTTCGTCTTCTCTCTTGCTTGCTAGTCC
TCTCTCTCC--CTCTCTTTGCTGTGGAGCGGAGAAGATAGAGAGATTCCCTGATCTGCTCGTCGTTCGAGCCTG-CCTGC
CTGCCTGCAAAATTTGGCAGCCGCGAGAAGGGAGACCGAAAAGGAGAGCGGAAAAGCGCATCTTATTTTAGTCTCTCCGC
CTCAGCTTCGCGGTTGCTTCGTCTGGATCCCGTAGAGGAGCCCACCC-GTTCCACCAAAACCCAATCTTCCGCTTGCTCG
AGATCGATTGGTTTCCAGATCCAAGCCCGCCCCTCCCTCGTCGCGAGATCGCAGGAAATCTGGGTGCGCGGCTCTGCAGG
AAGCTAGCCATCCAAGAAAAAGGTGAGTTGTTCTTTTCTTGTTTGGTCCCTCGTCTTCCAATGCTAGTAGGGTGTGGTCG
TTCTTGGCGATCTCTCCCCCTTCGATCGCGCAGCGTCTGCCGTGGATTGATCGGGCTCTTGATCTTGGTGTTTGTG----
--TTGGTTGGTTTCGATGGCAGATTTGGCGAGGCGAAGGGAAGGGGAAAGGATATCGGGAGAGAAGGCGAATAGACATGG
CTTTTGTGAGGCAGCGGGCGATGGGGAGGTGGCGGAGATGAGGGATGCTATCGTCTGCGATGGATTACCTGAGATCTTGC
TGGGGTCCGACGTCGTCGCCGGACGGGCGCCCTCGCAAGGGGGTGGATGCGGCCGGCCGGCAGGACGGGCTCCTGTGGTA
CAAGGACGCAGGGCAGCTCGTCGCCGGCGAGTTCTCGATGGCCGTGGTCCAGGCTAATAACCTGCTGGAGGACCATAGTC
AGGTGGAATCCGGGTCGCTGAGCACAACGGATCCCAACCTGCAGGGCAGCTTCGTCGGCGTCTATGATGGCCATGGTGGA
CCGGAGACGGCGCGCTACATCAATGACCACATGTTCAACCATCTGAAGGGTAATACCTCAATTGTTGCTGCGGCTCTCCT
GATGTAGAACTTAAA-------------------------------CTAGAAAGGATTTTACATCAAATGTCAGTCTAGC
TATGCACTGCGATCCATAGTTGTATTGTTTCCCATTGCTAGACCTGCAAGTGTCTGTGATTGATGCTGATTGTTGTCAGC
CATTTTTCTTGCCATGGATGTAGATATTTATTGGATGCCTGCATTGCAAGGGATATAGTTCTACTTGTAGTAATACAGAA
AACAAACAAGTGCAATTTAAATGATGTTCTCTTCGGAGCAGTTGCCTAGTTTATACTATATTCGATCCTTGGTTGATTTA
TTTTACT-------TTCAAGTATAATGGAAGCACATTTATTGTTGACTGTAGAGTGAATAAATGATAGTGTCGTTTACT-
ACCTTCACGTCATATTATGATATGTTTGAACTACATGTCAATCTCCATTAGTTCCCTTGCATGATGAACTTCCTTTTTCA
GGATATGCATCTGAGCAGAAGTGCATGTCAGTGGAAGTAATTCGGAAGGCTTTCCGAGCGACCGAGGAGGGATTTCTCTC
TCTAGTCAGTAATCAATGGTCGGTGAGGCCGCAATTAGCGGCGGTAGGCTCTTGCTGTCTAGTTGGTGTGATTTGTGCTG
GAACTCTCTATGTTGCAAATGTTGGGGACTCTCGTGCTATTCTGGGGAGACTTGTCAAGGGAACTGGAGAGGTTGTGGCT
ATGCAGCTCTCAGCAGAACATAATGCATCCTTCGAGGAGGTTAGGCGAGAGATGCAGGCAATGCATCCTGATGATCCCCA
CATTGTGATCCTGAAGCACAATGTTTGGCGTGTGAAGGGTATTATTCAGGTAAATGCTTGGAGTTCAGAAATTGCAACTG
GCATGTGATCCATAGCTTCCTTTATACAGTCTTCGGACATTAGGCTAAACTTTTCATTATTACCATAACTGCGTTTAAAT
GCTGCGTCATGGTGCTTCTATTAGAATTATTGCTGCATGTTTTTACATTAGGCAAATTCTCAGTTATCAGCTATATTTAG
GTGTTCTTGTTGGCTATTTTTTTACCCGTGTATACAATCTGCAATAATGCAACAGTCCGAGTCTTGTAATTAGGTAC---
--------------------------------------------------------------------------------
-------AGTAGTAGCCAAGACAAATACCATATTCAGCTGTTGAATGCATTTCCCTTGATGTCGATCCCGCAAATTAATT
ATTATGTATGCCTGCGTTTCTTAAAACAGATATGAGGTGTGCTTATCATGTACAATATCGTCATGTGCATTTCCTAGATG
AATCATTTTAATCTGCTGTTGTCTCTTGCAT--CGTTACTGCTTAGTCCCTTCCCAAATGCCATGCAATTGCTTCTGCCG
TGTATCTCACATGGTAGGATAATGTGTTGCAGATAACAAGGTCCATTGGAGATGTGTATCTGAAGAGACCAGAATTCAAC
AGAGAACCTTTGCATAGCAAGTTTCGGCTTCCAGAAACTTTCCAGAGACCGCTTCTTAGTTCTGAGCCAGCAATTACTGT
ACACCAAATACAGTTAACTGATCAGTTCATCATTTTTGCATCTGATGGGCTCTGGGAGCATCTTAGTAATCAGAAAGCTG
TTGAGCTAGTCCACAGTAGTCCTCGTAATGTATGTGTTCTTATCTTATGTTTAGTTTGTGTTACTGGGTTCTTTGAAAGC
TAAGTGCTAGTTCATGCATTCTTTTTCCGAACCACAAAGTACGTATTTTTGCTTCTGTAGTAATTTTATCGTTCTTTGGT
TGATGTTTCTGTTGAGGTAAGTGGCTATATTTTCTTTCTTATAAGGAATTA-GGGAATACCAGATATGAACATCTTTAGA
ACTCTTTCTAAGTTCTGTTAACATGTAATAGTTCTGCAAGAACATAGTATAGAC--ATTATCATGCAAGGGTATATTAGA
TTTTGTTCGCCTGCCACGATGGTTGCAACTGACTTAAATGGCACCAAGTTATCGATTTTGTAGCAGTTCCGCAGTTGTTG
CTGTTTTAGGTATTTAAATTTGTCTGCATCAAAATGTTGTTTGAGATAACAACAATGGTTTAGTCCCTAGAATTTTGTGT
TCCTCTGCTGGTCCTGGATTAGGTCATGTCTGGCTAATGTGGTATAGGTTATATTGTTGATTATCTATGTCTCTCTTTTC
ATGTCACACTATTGGAATCCCTAGTCGCTGAATTGAAGGTTACTTGCTTAAACTTCAGTCTGCAAATGCCTGGTTGGTTG
CTTATTGAGGAGATATTTTGTACTCCCTCCGTTCCTTTATAGTAGCAGTTATCATCTTCAGAGTTCAGACCTCCTTTTCT
TTTCCA--------------------------------------------------------------------------
-------------AGGGAACCATTTTTAGATCTCTTCAACATCTGCATTCTACA-TGAAGCATTGTGAATGAGCTACTTT
ACAACTGATTCGGTTATATTAATCACACCTT-CCTGAACTATGGCGATTGGCACCTCACCAACTAACCAATGTAGACATG
CTACTGAATCTCACTTCACATTTCAGTTTGCAAACAAACCATGTAGCAGAACCCAGCTTCATTATGTCTAAAC-ATCTTG
TTCTCATATTCTACTAGAGTCTTGTGTTCCTTAATTCATTTCATAGAACAACATTGTTTTCTTATTTTGTTATTAATGTT
ATCGTAACTTTATATGTTTCAGGGGATTGCTCGAAAGCTAGTGAAGGCTGCAATGCAGGAAGCAGCAAAGAAGAGGGAGA
TGCGGTATTCAGATCTCAAGAAAATTGACCGTGGAGTGAGGCGCCACTTTCATGATGATATAACGGTTGTCGTGGTATTT
TTTGATTCGAATGCCATAGCCACTGACGCCTGGAACCGGCCCACAGTTTCTCTGCGAGGTGGTGGCGTTGCCCTCCCTGC
AAATTCCCTTGCTCCATTCTCAGGTTCCTAGCCCTTCCACTGGAGTTAAGAAGACACGAAGACCAGAAAAGGGAAGGAAA
AGAAGAAGACAAGAAGAGCAGCAGCCACGGTCAAGTGTAGCGCGTTTCCTGTGCGTTCTCGCAAG--AAAAAAAAA-CTT
TTAGATTCAACCTGGTTACTAGTGTACTGATAGGGGCAAGGTATAAGATTAGATTATTCTTAGTGTACATTCTCCGGATC
GTCTTGTGATAATAGTTCATCTCATCACCATTTCATTTTGTTTAGCCCCTCACAAAGTGCTGCATCTATAGGCTGGCTAA
TCTTCGGCATGTAGCAGGTTGCTTTCTTTATGCCTTAATCTGCTGAGCTCTGATCAACACGATCTACAACGTTACTCTGT
TGACATGTCGATGCCACATGTGAACTTGCACATA--TTGAACAGCTCTCGTCACAGGGAACCTGATGAAGAAGCCATTTG
TGATGGCAATGCCTTGTGGAGTTCGCATCGAAGCTGAGCCCCTCATTTTAATTTCTTTATTACGTGCAATTTGAAAGAAA
CTTCCAAAGTTTTAATCAAGGTAGAAAGCGAGCATGATAAAACTAAGATTTTGTAGCATTGGTTTTCTGTTGCCAAGAAC
AGCCAGATCTGGTGCCATCCTTCCGTCCCATAATGTAAGACATTTCTGACACTACACTCGAGTCAAAAAAGGCATACATT
ATGGGGCGGAGGGATTAGAAAGCAGATGAACCATATACGCAACATCCTCTCAGTACGACGAACTTGTATAATTTATGGCA
ATGAAACATCACAGCATATTACTCACTCTGTTATCTACTACTCCAAAACATGAACACAG--AGAGTTTCTACCTAGCCCA
ACAGGTGCACCTCTGCCCTTCGAGGGCTTGCTCCTTACCGGAGGCCAGAGAAGCAAAAGTGTTTGCCACCTTCAGAATGA
TGAGCTCTCTCACCATC----GACTTGCCTTCACTGTGAGTTCAGGGACCGAGCAACTTCTTCCACCAGGCGTACCCTAA
CAGAACAACGGAGATCACAAAGCAGCCTGACGATGTACCTCCGACAAATGGCCAAAAGAAGCTGCCATCTGCGATGTCAT
AAAAATGGCATGGAATGTTCATCGCAAATGCCCCAGCTATGAAGGTATTGACGGCTATGCCGAAAGATGCAATGGTCAGC
GTAAGCTGAAGTTGGATCAGTTCATTTCGCTGATTGTCGAGTTGAATGTTGACGTAGTCTTCTGTGTC
>SNPs
S---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
---S-S----S-------S-------S------S----S--------------S-----------------SS-------
------------------------------------------S-S-----------------S-----------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------S-----
--------------------S------------------------------------------------------S----
--------------------------------S-------------SS------S-------------------------
-----------------------------------------S--------------------------------------
---------------------------------------------------------S--------S-------------
----------------------------------------------------------------------------SSSS
SS-------------------------------------------------------------S----------------
--------------------------------------------------S-S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S-----S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S--------------------------------------S------------S----S-----S------
------------------------------------------------S---S---------------------------
--------------------------------------------------------------------------------
--------------S-----S----------S------------------------------------------------
-S------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S----------S-------
----------S---------------------------------------------------------------------
-----------S-S------------S-------------------------S------------SS----------SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS-------------S-----------------------------------------S-----------------
---------------------------------------------S-----S--------------------------S-
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
------------------------------------S-------------------------------------------
----------------------------S--------------------------------------------------S
--------------------------------------------------------------------------------
----S---------S--S------------------S-------------------------------------------
----------------S---------------------------------------------------------------
------------------------------------------------------------------------S-------
-----------------------------------------------------------------------S--------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S-------------------------S--------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
S---------------------------------------S-----------------------SSS-------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S-----------------------------S
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------
>forward_38
------------------CCAGAAGCGCCTTAGGGTTT------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1205
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--------------------------------------------------------------------------------
----AGAATCTGGGTCGCTGAGCA--------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------
>forward_1011
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------GCGGAGATGAGGGATGCTAG-----------------------------
--------------------------------------------------------------------------------
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>reverse_2113
--------------------------------------------------------------------------------
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--------------------------------TGAGGAGGTTAGGCGAGAGA----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------
>forward_1205
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TGGAGGACCACAGTC
AGGTA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2562
--------------------------------------------------------------------------------
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-GGAGGGAGTATTAGCCAAGGC----------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1649
--------------------------------------------------------------------------------
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-----------------------------TGTTCAGAGCAGTTGCCTAC-------------------------------
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>reverse_3513
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------------------------------------------------------------------------GTTTGTGT
TTCTCTGCCGGTC-------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_2799
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-----------------------------------------------------------GCCATGCAATTGCTTCTGCT-
--------------------------------------------------------------------------------
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>reverse_5010
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-------------------------------------------------CTTGCAGCATCGGTTTTCTGT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
