>input_sequence_22314
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----------------------------------------------ATGAACCGCCCGACGCCGGCGCACCACAGGGGCA
TGCCGCCGCCGCCGCAGCTGGCGCGGTACGGCTCCGCGCCGGGCTCGTTCCTCGCCGCGCTCGCCGACTCCGTCGCGCGC
GGCGGGGGCGGAAGCGACGCGCCGGCCTCC------------------------------CAGCAGCACCAGCCGGTGGC
CGCCGTGGTGAGCCGGTTCTTCTCGGGGGAGTCGTCCGGGCTGACCTCCTGCGAGTCCAGCTGCCGGACGGCGGACGCCC
CGCCGGCGCTCCAGCGGGCCTACGGCGGCTCCGGCGAGATCCACGTGCCCCTCCCGCAG------CAGCAGCAGCAGCAG
CAGCCGGGGCTCCTCCGCCACAGCAGCTCCCCCGCCGGGCTGCTCTCCCGCCTCATGGCCGACCCGCACGGTACGTGCGC
ACGCACCCGTCCTACCTCCTCGTACCTTCGCGCGCGGCCCTGCCCACCATCGATCGATCG--------------------
-CTAGCTTCCAGCAAGCACTTTACACCGTGTCGTGCCCCCATAGGTTAGGCGGCCGGC-------------------CCA
CCGCGGTGGCCGACCTCGTTCGCTCCTGTCTC---CTCCTCCTCCAT--GATCGAGCTCTCCAGCTCGTCCTTGGTTCGC
GCTGAACCCTGATCTGTGATCTGCCAGCCTAGTTAGCGGGCGCTTAACTAATTCAGTTTCTGGCTTAG----TTACGCCT
CTACTGTCTCACCGTGCTTAGATAATACGA--------------------------------------------------
-----------------------------------------------------------ACTGCTCACATCGATCAAGGT
CAATGGTGGTTTCGATCGTATTAGTAATCTGTTCTTTATCGAAAAATCTCCTAATCTGTAGGGTGGCTGGCAAATGCCAG
GAAG-GAAGGAGAGGGAGGGGTGGAATAAATCTTTCTCATATTCTAATAACGGATAAAAAGCA-----CCCCTCATCATC
CTGTCCTCCATTGTTAGTTAAGTTA--AGAGCACCTTATCTATCCATCTCATCTCAT-----CTCATCTCAGATGCAGCA
CTATCATTGACTCATTATTCTACGCAAAGCATGTAAAAACCTCATTCATTGGCACATACAAGCAGTGCACTGAACCTGCC
TACAG----AACACAAGGGGTAGGGGTACACATTGTATCTCGCTGACGTGGCATCATCCTGCCCTCCTTGCTGGCAGTGG
CATCAGAGAACCTGGACACATGCCACCTCTCTTCTGTCCGACGAGGCATACCG----CTCGATATTACCGGCACATGTCG
CGCAGGCGATTCGTAGCACTTGGTCATCCATGATTAATTAGCGAACAAAATTCAGAGGAAGCGACACAGAGATAAGGCAG
GTTA----------ATACCATGCGTGTCGCGTCCACGTCGATCTGATGTGACTGTCACGCGGCAAAATGTTAATGAGTCG
AACGCTA-ATTAGAAATTGCACCATGTGTCTTTCT-------------ATGTATTTTTCTATGGCTGTTAACTGTCGACT
AAA-TAAACTAGAGGGTAGCAGAGCAATTTCCTTGGCTCGACGACTTTGAAGGGTCAGGCCACTTACAGCCGTTAACCGG
CGCTGCCTTCTGTTTCTTTAGCG---TAAAGTGAGTGGTGGTGATAAAAAAGGTGAAAACGATGTGCGAGTTGCAAAGCA
AATCATCTGTTTATACGTACCTAACTTTACGTAGAGGTGATTATTCTCCCAGTGACCCAGTACGTACCGGGATACC----
----------------------------------------------------------------------CGACCACTGT
TCATTTCTGCTGGATGATGACAAAT-CCGGCTTGTCTTTAGCTCTGTGTCAGTGGAGTACGAAGTGTAGGGTAGCATGGC
AGTTGTTCGTGACTTCGTGACTTCGTGTCGTGTCCTGGGTCGACGTAGCCGGCTGGTGGGGCGGGCCGGGCGTGTGGCGT
CAGTGTCACTCACTCTCACAACTGCTGACCTGCTCTGGCTCTGCGACTGT--TGATGCACAGGCAATGGCGGCATGGGCG
GCACGAGAGGAG---GAGGGATGGGGAGCGGCTATGCGCACTCGCACTCCCAGGGCGGAGGTAACGTCGACGCGATGGCG
GCGCAGCAGAGGAGGCTGAGCTCGCAGTGGAGCTTCTCGAGGCAGCAGGACATGATGCCGCACATCGCGGAGATGGGGAT
GGCCATGCCGACGCC------GATGCCGCCCGCGGCCGACGCCGGCGAGAGCATCGGCACCGGCCACGGCGGCGGCTCCA
GCGACCTCTCCAGGAGCTTCTCCATGAGCTCCTGGGACGACACCAACTCCAACATCATCTTCTCCGCGCCCGG---CGGC
GGCGGCAAGAAGGCCAAGCTGATGGCCGACGGCGACGACGGCATGGTCACCAGCTTCAGCAACATCGACTCACAGGTACG
TACGTTCT------TGACATAGCT------CATCCGGACTGTGTGCTGCCGCCATTGTTTACG---------CTTCTGAC
GCCTTGCTCCAAATTAAATTCAGTTTGGCTCGTCT--C-------TGGACATGCCCGGCATGGACGACTACCTGCAGCTG
CAGCAGGACTCCGTCGCCTGCAGGGTCCGCGCCAAGCGCGGCTGCGCCACTCACCCGCGGAGCATCGCCGA-GAGGGTCA
GTTAGCTCTCTCTGCGACATTATGGACTCCCAACTTGACTCAACATTACCATCATACTCCTTGCATGCTCGGTGTCGATC
GGATGTTTTAACTGAAT-AATTTTCCTGTATGTGATGCT--TATAGGAAAGAAGAACAAGGATCAGCAAGAGGCTT---A
GGAGGTTGCAAGACCTCGTGCCCAACATGGACAAGGTAACTAA----ACCAGTTGAATTATTCTGTTGTTGTCAGTAATG
GGCACTGTCAATTCTGCCTCTTTTTCTTTTTTCTTTTGCCGATTCCTATCAATTCTGTCAGCAGACAAGGTAACC-----
--------------------------------------------------------------------------------
-----------------TACACTGTCTG----------------------------AT--GAAAATTCAGAACCTCGGTA
GTTGTCGATGACTCGGACCC------------AGTTACTTCAGATTTCAC-ATTACATCCGTGCGCCTGTTCTCTGGGAG
AAGTCAT-GTAGTACAGACATGTTACTAAGTTTCTTCTTGAATATGCAGCAAACAAATACTTCAGACATGCTGGACATTG
CAGTAGACTACATCAAA----GTGCTGCAGGACCAAATTGAGGTATGCTCCACAGAGACACAGCTGTCTTAAA-------
--------------------------------TAGCACA------CACTTCCAGCAGGCCTTG--TTAAAAATATCATTT
TGCACTGCA------------------------------TGTTAACATGTTTCCTTAATTTTGTACACAAGTATAAACTG
ACTAGGTAATGACA-TATTTATTACCAGAGTGAAAGGGAGATGATAGAAGGTAATACTAATTCATCTTAAAATGGAATCA
TGCAGAAACT-AAAACAGGACCAAGGAAACTGCTCCTGCTCAGCCGATCAGAAGTGCTGA--------------------
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>chr3D_1_TraesCS3D01G388700
GTAAA---------------------------------------------------------------------------
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--------------------------GGAACATTTAGGCTGACCTGAATGAAACACGTCTGA-TTAGACAGTGTAGGCTG
TCAACAGCCAGCCAAGATTTTTTTTCCCTCTACCTG-------AATAGAAGGGAACATTGCAAAAGAAACATTTTGGTGG
ACCTGAATTGAGCACAG--------------------------------------CGACTTAGATGGTGTTGGTGTAGGG
TGTCAACAGCCATCCACGGACGCGCATGGAAGAGAATATACCATACCACGGGGAGGCGTACGTGATGAATGAATGAACAG
ACCAACGAATCGACCGATTCGTCCGTCCATCCCAAGAGTGGACCGAGAATACGCACA----CGCCTTCCTGGAG------
-------------------------CGTCAAGTTTTCCTATCCACCAAAACCCGA-------------------------
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-----------------------------------------------------------------TGCCGTCGAGACAAG
CAGATGCA----GACGGATGACCCGTCCGGCTGACAGCCCCGCCCACTGCCGTGACGCAGCGGGCGCCGAGGCGA-----
----------ATATACAGCTGCCGACCTAAAACTCTGAAAGGTACGGCCAGCGGCGACGCCGCCGATCCGGTCCGGTCCA
CGCGCGTCGC---TTCGCCCGCGCATGTCACCGCCGCAAACTGCTCGCGTGGTGTGCCGTGCCGGGAGACGAGAGAGGAA
AAGTCTCTGCGTG----CGCGCCTCCGAATATCTGGTCTGGTCCGGG---------------------------------
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-------GCGGGAGGACGAGGACTGGAGCCGGAGCCCGGCCGAAACCGACGACCCCGTGCGGCGCGT----CGTGTCGCC
CTCGCGGGCGCGCACATGGCCACACATGACTTGG--------CGTCCGCCTATATGAATGCGCGGGCGCCGCGGGGCCCG
GCCACGCATCCACCCACGACCACGATCCATCCCCCCT--CGCATCCGAGGA--TCGGAGCGCCGCGCCCGC----GCTAA
AAGGGAGCT---GGAGGAGCAGGGGCAGGGGGGACGCACGCACGCACGCACACAGCCGCCACCACCCCCCACCGGCCCAC
CTCGCGCCCGCTTTGCCCTGCTCTGCGC---------------------GCACGCGCACTAGCCCATC-GCTCCTCACAG
CCGCGCCTACTGCCGTGCTGA-----------------------CCATGAACCGCCCGACGCCGGCGCACCACAGGGGCA
TGCCGCCGCCGCCGCAGCTGGCGCGGTACGGCTCCGCGCCGGGCTCGTTCCTCGCCGCGCTCGCCGACTCCGTCGCGCGC
GGCGGGGGCGGAAGCGACGCGCCGGCCTCC------------------------------CAGCAGCACCAGCCGGTGGC
CGCCGTGGTGAGCCGGTTCTTCTCGGGGGAGTCGTCCGGGCTGACCTCCTGCGAGTCCAGCTGCCGGACGGCGGACGCCC
CGCCGGCGCTCCAGCGGGCCTACGGCGGCTCCGGCGAGATCCACGTGCCCCTCCCGCAG------CAGCAGCAGCAGCAG
CAGCCGGGGCTCCTCCGCCACAGCAGCTCCCCCGCCGGGCTGCTCTCCCGCCTCATGGCCGACCCGCACGGTACGTGCGC
ACGCACCCGTCCTACCTCCTCGTACCTTCGCGCGCGGCCCTGCCCACCATCGATCGATCG--------------------
-CTAGCTTCCAGCAAGCACTTTACACCGTGTCGTGCCCCCATAGGTTAGGCGGCCGGC-------------------CCA
CCGCGGTGGCCGACCTCGTTCGCTCCTGTCTC---CTCCTCCTCCAT--GATCGAGCTCTCCAGCTCGTCCTTGGTTCGC
GCTGAACCCTGATCTGTGATCTGCCAGCCTAGTTAGCGGGCGCTTAACTAATTCAGTTTCTGGCTTAG----TTACGCCT
CTACTGTCTCACCGTGCTTAGATAATACGA--------------------------------------------------
-----------------------------------------------------------ACTGCTCACATCGATCAAGGT
CAATGGTGGTTTCGATCGTATTAGTAATCTGTTCTTTATCGAAAAATCTCCTAATCTGTAGGGTGGCTGGCAAATGCCAG
GAAG-GAAGGAGAGGGAGGGGTGGAATAAATCTTTCTCATATTCTAATAACGGATAAAAAGCA-----CCCCTCATCATC
CTGTCCTCCATTGTTAGTTAAGTTA--AGAGCACCTTATCTATCCATCTCATCTCAT-----CTCATCTCAGATGCAGCA
CTATCATTGACTCATTATTCTACGCAAAGCATGTAAAAACCTCATTCATTGGCACATACAAGCAGTGCACTGAACCTGCC
TACAG----AACACAAGGGGTAGGGGTACACATTGTATCTCGCTGACGTGGCATCATCCTGCCCTCCTTGCTGGCAGTGG
CATCAGAGAACCTGGACACATGCCACCTCTCTTCTGTCCGACGAGGCATACCG----CTCGATATTACCGGCACATGTCG
CGCAGGCGATTCGTAGCACTTGGTCATCCATGATTAATTAGCGAACAAAATTCAGAGGAAGCGACACAGAGATAAGGCAG
GTTA----------ATACCATGCGTGTCGCGTCCACGTCGATCTGATGTGACTGTCACGCGGCAAAATGTTAATGAGTCG
AACGCTA-ATTAGAAATTGCACCATGTGTCTTTCT-------------ATGTATTTTTCTATGGCTGTTAACTGTCGACT
AAA-TAAACTAGAGGGTAGCAGAGCAATTTCCTTGGCTCGACGACTTTGAAGGGTCAGGCCACTTACAGCCGTTAACCGG
CGCTGCCTTCTGTTTCTTTAGCG---TAAAGTGAGTGGTGGTGATAAAAAAGGTGAAAACGATGTGCGAGTTGCAAAGCA
AATCATCTGTTTATACGTACCTAACTTTACGTAGAGGTGATTATTCTCCCAGTGACCCAGTACGTACCGGGATACC----
----------------------------------------------------------------------CGACCACTGT
TCATTTCTGCTGGATGATGACAAAT-CCGGCTTGTCTTTAGCTCTGTGTCAGTGGAGTACGAAGTGTAGGGTAGCATGGC
AGTTGTTCGTGACTTCGTGACTTCGTGTCGTGTCCTGGGTCGACGTAGCCGGCTGGTGGGGCGGGCCGGGCGTGTGGCGT
CAGTGTCACTCACTCTCACAACTGCTGACCTGCTCTGGCTCTGCGACTGT--TGATGCACAGGCAATGGCGGCATGGGCG
GCACGAGAGGAG---GAGGGATGGGGAGCGGCTATGCGCACTCGCACTCCCAGGGCGGAGGTAACGTCGACGCGATGGCG
GCGCAGCAGAGGAGGCTGAGCTCGCAGTGGAGCTTCTCGAGGCAGCAGGACATGATGCCGCACATCGCGGAGATGGGGAT
GGCCATGCCGACGCC------GATGCCGCCCGCGGCCGACGCCGGCGAGAGCATCGGCACCGGCCACGGCGGCGGCTCCA
GCGACCTCTCCAGGAGCTTCTCCATGAGCTCCTGGGACGACACCAACTCCAACATCATCTTCTCCGCGCCCGGCGGCGG-
--CGGCAAGAAGGCCAAGCTGATGGCCGACGGCGACGACGGCATGGTCACCAGCTTCAGCAACATCGACTCACAGGTACG
TACGTTCT------TGACATAGCT------CATCCGGACTGTGTGCTGCCGCCATTGTTTACG---------CTTCTGAC
GCCTTGCTCCAAATTAAATTCAGTTTGGCTCGTCT--C-------TGGACATGCCCGGCATGGACGACTACCTGCAGCTG
CAGCAGGACTCCGTCGCCTGCAGGGTCCGCGCCAAGCGCGGCTGCGCCACTCACCCGCGGAGCATCGCCGA-GAGGGTCA
GTTAGCTCTCTCTGCGACATTATGGACTCCCAACTTGACTCAACATTACCATCATACTCCTTGCATGCTCGGTGTCGATC
GGATGTTTTAACTGAAT-AATTTTCCTGTATGTGATGCT--TATAGGAAAGAAGAACAAGGATCAGCAAGAGGCTT---A
GGAGGTTGCAAGACCTCGTGCCCAACATGGACAAGGTAACTAA----ACCAGTTGAATTATTCTGTTGTTGTCAGTAATG
GGCACTGTCAATTCTGCCTCTTTTTCTTTTTTCTTTTGCCGATTCCTATCAATTCTGTCAGCAGACAAGGTAACC-----
--------------------------------------------------------------------------------
-----------------TACACTGTCTG----------------------------AT--GAAAATTCAGAACCTCGGTA
GTTGTCGATGACTCGGACCC------------AGTTACTTCAGATTTCAC-ATTACATCCGTGCGCCTGTTCTCTGGGAG
AAGTCAT-GTAGTACAGACATGTTACTAAGTTTCTTCTTGAATATGCAGCAAACAAATACTTCAGACATGCTGGACATTG
CAGTAGACTACATCAAA----GTGCTGCAGGACCAAATTGAGGTATGCTCCACAGAGACACAGCTGTCTTAAA-------
--------------------------------TAGCACA------CACTTCCAGCAGGCCTTG--TTAAAAATATCATTT
TGCACTGCA------------------------------TGTTAACATGTTTCCTTAATTTTGTACACAAGTATAAACTG
ACTAGGTAATGACA-TATTTATTACCAGAGTGAAAGGGAGATGATAGAAGGTAATACTAATTCATCTTAAAATGGAATCA
TGCAGAAACT-AAAACAGGACCAAGGAAACTGCTCCTGCTCAGCCGATCAGAAGTGCTGACGCCGCAGAACCAGATGTGC
GAGGTTATGTTTGTACCAATGTGATTAGCAAGCCCAAGTTTTGC-TCGGGAGATTAAGTTGTAAATGTCCTTCGCATC--
--------------------------GCGTTTCAAGTAGTCTCCATGCCCATCTTCCCCTTTCGTATTTGTACTA--TGG
ATTAGTAGCTTCAATGGCTTCAAGACTAGGAGGTGACAAGTAGAATGTTGTAATTTAAGTAT-TAAGGCCTTGCCAATCT
TTCATTTCAACGCAAGTTGGATTGCTTCTGCTTATCACCATTTCGCCTGGTAAAATTATTGGAGGGGTCCTCTGCCTTGA
GTCCATTTCTTGCTATCAAAGTTCATTTTTCCTGCAACAAATTGGACCCAACGAGTTCTTCTAAATTTTCAACCGTAAAA
CCTTTCATGTTAGCATGAAACTCCTTGGCGCAAAAAAAAAACTTGAAACTCCACATCATGCTCTGCAACTTGACGCTCGC
TGCCATCGTCGGATCCGGCTCCTCTGGCTTGCAGGAGCAAAGGCAGGGAAGCTACAGTGCTCCCATGTGTAAAAGCACCA
AGGCAAGTCAGAGAGCAAAGTATGCATTGTAGCTAAAATAATGCGGCAATTGCTGTAGATAAACTCAGGTTTGGATAACT
GTATAAGCGTATGTCGTGAAGCAAAGTCAGAGGACTGTAGCTCCCTCTGCCTTTCATTCGTATGCCAGAGGATCCGGTTC
CGCCATCGTCAAGCATCACGACAAATCAAAGAACTCCAACGGTAAGTTTGTAATTTACAACATGCAACACTGCACCCTTT
TTCCTATGAGATTAGACTGAATTTTCAAACAAAATATATGGTTCCACCTAACTATTCATCAATGTTAGGCTTGCGCCCTC
CAGCTCCATCACCACACTACACGTTGTACTCATCCTCGTCCACTTCTTGGAGGCCTCGGCACAAAATTGGTGATGTGACG
ACATTCACAATTGTTGTCCACGTGGAGATGACGGGTCAACGGTTAAGAGTCT
>chr3B_1
GTAAA---------------------------------------------------------------------------
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--------------------------GGAACATTTTGAATGACTTGAATTAAACACGTCTAATTTAGACAGTGTAGGCTG
TCAACAGCCAGCCGATTTTTCTCC-------ACCTGGCTCTTGCATGGAAAGGAATGTTGCAAAAGAAACATTTTGCCGG
ACCTTGAATTGGGCACGACGACTTAGATGGTGTTTTTTTTCTTTTTGCGAGAAGACGACTTAGATGGTGTTGGTGTAGGC
TGTCAACAGCCATCCACGGACGCGCATGGAAGAGAATAATATACCACGAGCCGAGCGTACG----TGAATGAATGAACAG
ACCAACGAATCGACCGATTCGGCCATCCATCCCACGAGTGGACCGAGAATATGTACA----CGCCTCCCTGCACCGTCAA
GTTTTCCTTTTATTTTTAATGTGACCGTCAAGTTTTCCTGTCCACCAGAATCCGG-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TACTGTTGAGAGAAG
CAGATGCA----GACGGATGACCCGTCCGGCTGACAGTCGCGCCCACTGCCGTCACGCCGCGGGCGCCGGGGCGAAGAAG
AAGAGGAAGAATATACATCTGCCGACCTAAAACTCTGAAAGGTACGGCCAACGGCGACGCCGCCGATCCGATCC-----A
CGCGCGTCGC---TTCACCCGCGCGTGTCACCGCCGCAAACTGCTCGCGTGGTGTGCCGTGCCGGGAGACGAGAGAAGAA
AAGTCCGTGAGCGCGCGCGCCCGTCCGAATGTCTGGAATGCGGCATGAGGCCAACTCCACCGCGCGACCCTAAACGAACA
TCCGTTTTGTATGGATTATGTTCGTTTGGGTAGGACAATGGGGTCGTGTCCGGGCAATTTTCTGGATGCAGTGGCCGTGC
GCACAGCGCGCGGATGCATCCCGGCCGCATCTTGTCCGCGTGCACATTTCTTTGCAAGTCCTTTAAAAAAAATTCATCAT
TCATTTTTGGTACATCACAATACATTATCACATTTTGACTAGTAATGCAAGGCCAACGAAAACAAGAACCACAAAAATAC
ATTTGAGAAGATACCCAACTTCCATAACTGCTCCCTTGAGTTGGGTCAGTGCCTTCTCGATGCACTCATTGTTTATCTGT
GGAGGAGGCTCGACGTTGCACCCTCCTTTCTTCTTCAAGCCAGAAGTCGATGTTGCTTCCTAACATGTAGTATCGTGCCT
AGACTCTAATCTAGCAACAAGTGCACTTGTCTCATCTACAACCTCTAGGCTAGCTAAAAGTGCACGAACATGTACTAGAT
TTCGCTCTATCAATATATCGATGTACTCTTCTTTCCAATACCAAAACTTGCATCCATTCTACACAATAAAACTTAAAGTT
AGCACAATTTATCTAATCCGAGAGCACAAACCGAAGCTAAAAAGACCACGTACCCCATCATTTAAGCACTTGATGAACAC
CCATCCGGGATGCTCCGGTGTTGTAGACACGCGGCGCACGACCATCCTTGGGCAGTGGTCGCACTTGATGAGGGGCAACG
GTGCGCCAACGAGCTTTTGGGCAAGCATCGAGCCCGGCCAGCCGTTATTCGCGTATCTGTCGGCGGACCATCGACGATGC
AGATCCGAGCGGCTAGAGGACGAGCCACTGCCTGCATGTGGCCTTGCGGCCCTGCCAGGGCCTTCCGGGGAGGTGCCCGG
CCAGTCCATGGTGCGGCCCGGCCTCCCACAGCCGGGCGAGCTCAAGACCGACCGGATCCGCCCCAAATCCGGTCGGCGGG
TGCGAAAACAAGACGGCCGTGGTTGGGTAGCTCGGCGGCGACGAGGGGAAGGGGCTGGGCGAGCGCGCGCCCGTGTTGCG
CGGCCGCAATGGCAGCCGGCGGCGGCGGCGGGCGTCAGGGAGGAGTGCGGAAGAGTGAAGAAAAATGGAAAAGAATGAAG
TGGGATGCGGTCGGAGGAAGGGAGGGGGGCGGATAGAAAAGGTCCGTCCTGTGCCACCGACGGGGGTCAGGGGAGAACAC
GCGCAGACGGCCGACGCGTCCGCGTGATGTCCGTTTCACCCCAAAAGCGACGCAAACTTGGGTCGCGGATGGGTCGAAAG
TTGGCCTGACCGGAGCCA-------GAGCCC--GCCCGGCCGAAACCGACGACCCCGTGCG-----T----CGTGTCGCC
CTCGCGGGCGCGCACATGGCCACACATGACTTGGCGCGTCGCCGTCCGCCTATATGAATGCGCGGGCGCCGCGGGGCCCG
GCCACGCATCCACCCACGACCACGATCCATCCCCCCT--CGCCACTCGGAGCGCCGGAGCGCCGCGCCCGC----GCTAA
AAGGGAGCG---GGAGCAG---GGCCAGGGAGGCCGCACGCACGCACGCACACAGCCGCCACCA----------------
-TCGCGCCCGCTTTGCTCTGC--------------------------------GCGCACTAGCTCATC-GCTCCTCAGCG
CCGCGCCTCCTGCTGTGCTAACGCA-----CCGCCGGTCTTCGGCCATGAACCGCCCGACGTCCGCGCACCACAGGGGCA
TGCCGCCGCCGCCGCAGCTGGCGCGGTACGGCTCCGCGCCGGGCTCGTTCCTCGCCGCGCTCGCCGACTCCGTCTCGCGC
GGCGGGGGCGGAGGCGGAGGCGAGGTGCTCTCCCACTCCCAGTCCCAGCAGCAGCA---TCAGCAGCACCAGCCGGTGGC
GGCGGTCGTGAGCCGGTTCTTCTCGGGGGAGTCGTCCGGGCTGACCTCCTGCGAGTCCAGCTGCTGGACGGCGGACGCCC
CGCCGCCGCTCCAGCGGGCCTACGGCGGCTCCGGCGAGATCCACGTGCCCCTCCCGCAG------C---------AGCAG
CAGCCGGGGCTCCTCCGCCACAGCAGCTCCCCCGCCGGGCTGCTCTCCCGCCTCATGGCCGACCCGCACGGTACGTATGC
ACG-CCCCGTCCTACCTCCTCGTACCTGCTCT----------GCC-CCGTCGGTCGATCG--------------------
-CCTACCGAGTGCCTTTCTCGT-----GTGTCGTGCACCCATTGGTTAGGCCGGCCCACCGCGGTGGCGTGCACGTGCCA
GCGCGGTGGCCGACCTCGCTCGCTCCTGTTTTCGTCCTCGCCCGTGATCGATCGAGCTCTACTGGCTTAGCTCTAGCTCG
TGGGAAGCCTCATATGTGATCCGCCAGCCTAGTTAGCGGGCGCTTAATCAGTTCAGTTTC-----TAG----TTACGCCT
CTA--GTCTCACCGTACTTAGATAATAGTACTGCTCACCGTAATTGGGCAATACTC------------------------
------------------------------------------------------------CTCCTAAGATCGACGAAGGT
CAATGGCCGGTTCCATCAATTTGTGCTCTA-----------------CTCCTAATCTGTTGGGTGGCTGGCATGGCAAGT
GTCACGAAGGAGACGGGC-----GGAATAATTTGCCTTATATTCTAATAACGGATATAAAGCA-----CTCCTCATCATC
CTGTCCTCCATTGTTAGTTAAGTTATAAGAGCACCTTATCTACTCATCTCATCTCATCTCATCTCATCTCAGATGCAGCA
CTATCATTGACCCATTATTCTATGCGAAGCATGTAAAAACTTCATTCATTGGCACACATAAGCAGTGCACTGAACCTGCC
TACAG----AACACAAGGGGTAGGGGT--ACATTGTATCTCGCTGACGTGGCGTGATCCTGCTCTCCTTGCTGGCAGTGG
CATCAGAGAACCTGGACACATGCCACCTCTCTTTTGTCCGACCAGGCATATATATCACTCAACATTACCAGCACATGTCA
CGCGGGCGGCTCATAGCACCTGCTCATCCATGATTGATTAGCGAACAAAATTCAGAAGAAGCCACACACAGATAAGGCAT
AGGCAGGTAAATATATACCGTGCGTGTCGCGTCCACGTCGACCTGATGTGACTGTCATGAAGCCAAATGTTAATGAATCA
AACGGCA-ATTAGAAATTGCACCGCGTGCCTTTTTTCGATGTATTTTTTGTATGGCT------GTTGATGATTGCCGACT
AAACTAAAAGGCAGTACAGTGGAGCAATTTCCTCGGCTCGACGACTTTGAAAAGTCAGGCCACTTACGGCCGTTAACCCT
--GCCTTGTGG---TCTCTGGCG---TAAAGCAAGTGGCGGGGAT-AAAAAGGTGAAAATGATGTGCGGGTTGCAAAGCA
AATCATCTGTTTATACGTACCTAACTTTACGTAGAGGTGGTTATTCTCCCAGTGACCCGGTACGTACCGGGATACC----
----------------------------------------------------------------------CGACCACTAT
TCATTTCTGCTCGATGATGACAAAT-CCGGCTTGTCTTTAGCTCTGTGTCAGTGCAGTATGAAGTGTAGGGTAGCATGGT
--------AGTAG--------TTCGTGTCGTGCCCTGGGTCGACGTAGG-GGTTGGTGGGGCGGGCCGGGCGTGTGGCGT
CACAGTCACT--CTCACACAACTGCTGATTTGCTCTGGCTCTGCGACTGT--TGATGCACAGGCAATGGCGGCATGGGCG
GCACGAGAGGAGGAGGAGGGATGGGGAGCGGCTACGCGCACTCGCACTCGCAGGG---AGGCAACGCCGACGCGATGGCG
GCGCAGCAGAGGAGGCTCAGCTCGCAGTGGAGCTTCTCGAGGCAGCAGGACATGATGCCGCACATCGCGGAGATGGGCAT
GGCCATGCCGACGCC------GATGCCGCCCGCGGCCGACGTCGGCGAGAGCATCGCCACCGGCCACGGCGGCGGCTCCA
GCGACCTCTCCAGGAGCTTCTCAATGAGCTCCTGGGACGACACCAACTCCAACATCATCTTCTCCGCGCCCGG---CGG-
--TGGCAAGAAGGCCAAGCTGATGGCCGACGGCGACGACGGCATGGTCACCAGCTTCAGCAACATCGACTCCCAGGTACA
GTACGCCCG--------CATGGCT------CATCCGGACTGTGTGCTGCCGCCATTGTTTACG---------CTTCTGAC
GCCTTGCTCCAAATT----TCAGTTTGGCTCGTCT--A-------TGGACATGCCCGGCATGGACGACTACCTGCAGCTG
CAGCAGGACTCGGTCGCCTGCAGGGTCCGCGCCAAGCGCGGCTGCGCCACTCACCCGCGAAGCATCGCCGA-GAGGGTCA
GTTAGCTTTCTCTGCGACATTATCGACTCCCAACTTGACTTAAAATTGCCAT--TACTCCTTGCATGCTCGTTGTCGATC
GGGTGTTTAAACTGAAACCATTTTCCTGTTGGTGATGTT--TATAGGAAAGAAGAACAAGGATCAGCAAGAGGCTT---A
GGAGGCTGCAAGACCTCGTGCCCAACATGGACAAGGTAACTAACTAAATCAGTTGA--------GCTGTAGTAAGTGATG
GGCACTTTCAGTTCGGT------------------------------------------AGAAGGCGGGGTTGAAAATCT
CACCATGAATCACAGAAGAAGCTCGTACTCACTAAAGTACTAACACTGGG-AATTTTGACCTAAACTG------------
----------AAAGTATTGCCCTGTCTG----------------------------AC--GAAAATTCAGAACCTCGGTA
GCTGCCGATG-----GACCT------------AATTACTTCAGATTTCAGAATTGCATTTGTGCACCTAATATCCAGGAG
AAGTCAC-ATAATGCAAAACACTG-ATAAGTTTCTTCTTGAATATGCAGCAAACAAATACTTCAGACATGCTGGATATTG
CTGTAGACTACATCAAA----GTGCTGCAGGACCAAATTGAGGTATGCTCCACATAGACACAGCTGTTAGTAGTTAGTAT
AAAGTTGGGTCATCTATTTTAAAACGGGGGAGTAGCACA------CAGTTC---GAGGCCTTG--TTAAAGATGTCGTTT
TCACTACGCATCACACGTTGCCTTAATTTAATTTTTTTTTGGCAGGACGTTTCCTTAACTTCTTACATAAGTC----CTG
ACTAAGTAATGAGA-TATTTGTTACCAAAAGTAAA-----ATGATAAAATGCAATACTCAT--ATCTTAAAATTGATTTA
TGCAGAAACT-AAAACAGGACCAGGGAAACTGCTCCTGCTCAGCCGATCAGAAGTGCTGACACCGCAGAACCAGATATGC
GAGGTTATGTTTGTACCAATGTGATTAGCAAGCCCAAGTTTTGCTTCGGGAGATTAAGTTGTAAATGTCCTCCGCA----
------------------------CC-------------------------------CATTTCTTGCTTGTACTACGTGG
ATTACTAGCTTCAATGGCTTCAAGACTAGGAGGTCACAAGTAGAATGTTGTAATTTAAGTATGTAAGGCATTGCCAATCT
TTCATTTCAACGCAAGTTGGATTGCTTCTGCTCATCATCATTTCCCCTGGTAAAATTATTGTAGGGATCCCCTACTTTGA
GTCATTATCGTGCTACCAAAGATTATTTTTCCTGCACAAAGTG-------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------
>chr3A_1
GTAAAGGAACATTTTGGCTGACCTGAATTAAACATATCTAATGAGATAGTTAGGTCGTCAACAACCAGTCGGTTTTTCTC
TACCTGCATAGAAAGCAACATTGCAAAAGAAACATTTTGGTGGACCTGAATTAAGCACAACGACTTGCATGGTACACCTG
AATTAAACATGTCTAATTAGATAGTGTAGGCTGTCAACAACCAGTCAGTTTTTCTCTACCTACATAAAAAGCAACATTGA
AAAAGAAACATTTTGGTGGACCTAAATTAAGCACAACGACTTGCATGGTGCATGCTATCAACGGCCATCCACAGACGCGC
ATGGAAGAGAATATCCCACGGGTGGACGCGAACAATCCCCCGGCGGTGATCATGGAGATTGACCGCCCTGGGGCAGCGCA
GTGCTATGGTTTGAATCGGTTAGGCTGATACCATGTTTGAAGGGATAGAGAGGGACTGATGAATTGTTGTTTATTACTTG
AGCCTCGTGAGCATATATATAGAAGTACAATGATCAACTCAAAGTACAAGATAAGAGAGAACATATTCTAGTCCATCCCG
TATTTCCTAACTAATCACGATACTTAACAATCACAACCACCCCTGAAGGACCTTGGGGCTACCACCCTGGTACCCGAATT
CCATTGGACGCGTGCACTGTCGACAGTCAACGTTGCGCTGACCAGGGACCTCCCCAAGCGAGAGGATGAGCCCCGCCAGC
GTTGTCCGCCGAGGCAGCATCTTGAAGTGGTGAGGGGTAGGGTTCCTCCTGCCGAGAGAAGTGAGATGTCATTTTCTCTA
CCAGGAGAGAAAGGAAATATTGTAAAGGAACATTTTGGCTGACATGAATTAAACTCGTCTAATTAGAGT-GTGTAGGCTG
TCAACAGACAGCCAATCTTTCTCG-------ACCTG-------CATAGAAAGGAGCATTGCAAAAGAAACATTTTGATGG
ACC-TGAATTAAGCACAACGACTTGTATGATGT-------------------------------------------AGGC
TGTCAACAGCCATCTAGGGATGCGCATGGAAGAGAATATCCCACGTGTAGACGC--------------------GAACAG
ACTAACGAATTGACCAATTCG----TCCATGCCACAAGTGGACCAAGAACATATACGCCTTCGCCTTTCTGAAT------
-------------------------GTTCGAGATTTCCTATCCACAAAATCCGCAATCTCGTACAACTATTTTTCTTTGA
ACACATTAGAGACGCAAGCGCTCCCACATACGCGCATATACTCACACTTATGAACACATACACACGCATACCCTGCCCTT
ATGAGCATATTTGAGAGACCGAGTCAATATATCCTTGAGATTTACAAAGTCACCGTAGACGAATCGTGGTCGACGAAAAC
ATCTCCTGCCACTGAAAACGTATCGCCAAAAATCCTGAAATAAATCAAGAAAAAATAATGCGAGCGCAAGAAGTTTAACC
CTGATGGGTTAGGAATACCACTGTTTTTCAAACGATCGAACCACAGGTTGGTTCACATCTAGCACTACTATTGAGGCAAG
CAGATAGAGATGGAGGGATGACCCGTCTGGCTGACAGCCCCGTCCACTGCCGTGACGCAGCGGGCGCCGGGGCGAGGAAG
AA---GAAGAATATACAGCTGCCGAC--------CTGAAAGGTACGGCCAACGGCGACGCCG---ATCCGATCC-----A
CGCGCGTCGCGGCTTCGCCCGTGCATGTCACCGCCGCAAACCGCTCGCGTGGTGTGCCGTGCCGGGAGACGAGAGAGGAA
AAGTCTCTGCGTGCGCGCCTCCGTCCGAATATCTGGTCTGGTCCGGG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------GACTGGAGCCA-------GAGCCAGAGCCCGGCCGAAACCGACGACCCCGTGCG-----TGCGCCGTGTCGCC
CTCGCGGGCGCGCACATGGCCACGCATGACTTGGCGCGTCGCCGTCCGCCTAGATGAATG-------------GGGCCCG
GCCACGCATCCACCCACGACCGCGATCCATCCCTCCTGGCGCGAGTCGGAGCCTCGGAGCGCCGCGCCCGCCCGCGCTAA
AAGGGGGCCGGAGGAGCAG---GGGCAGGGGGGACGCACGCACGCACGCAGCCG--------------CCACCGGCCCAC
CTCGCCCCCGCTTTGCCCTGCCCTGCTCTGCGCGCACCACCAATCATCGGCGCGCGCACTAGCTCGGCAGCCCCCCGGCG
CCGCGGCTCCTGCCGTGCTGTGCTGACCCGCCGTCGGTCCTCGGCCATGAACCGCCCGACGCCGGCGCACCAGAGGGGCA
TGCCGCCGCCGCCGCAGCTGGCGCGGTACGGCTCCGCGCCGGGCTCCTTCCTCGCCGCGCTGGCCGACTCCGTCGCGCGC
GGCGGGGGCGGG------GGCGAGGTGCCCTCCCACTCCCAGCCCCAGCAGCAGCAGCATCAGCAGCACCAGCCGGTGGC
GGCCGTGGTGAGCCGGTTCTTCTCGGGGGAGTCGTCCGGGCTGACCTCCTGCGAGTCCAGCTGCCGGACGGCGGACGCCC
CGGCGCCGCTCCAGCGGGCCTACGGCGGCTCCAGCGAGATCCACGTGCCCCTCCCGCAGCAGCAGC---------AGCAG
CAGCCGGGGCTCCTCCGCCACAGCAGCTCCCCCGCCGGGCTGCTCTCCCGCCTCATGGCCGACCCGCACGGTACGCACCT
ACGCCCCCGTCCTACCCCCTCGCACCCGCTCT----------CCCGCCGTCGGTCGATCGATCGCTCGTCCTGCGGTCCT
GCCTACCGAGTGCCTTTCTCGT-----GTGTCGTGCGCCCATAGGTTAGGCGGCCGGC-------------------CCG
CCGCGGTGGCCGAGCTCGCTCGCTCCTGTTTCCTGCTCCTCCTCCAT--GATCGACCTCTCTAGCTCGTCCATGGTTTGC
GTGGAAGCCTGATCCGTGATCTGCCAGCCTTGTTAGCGGGCGCTTAATCAATTCAGTTTTGGTAGCGGTAGCTTACGCCT
CTACTGCCTCACCGTGCTTAGATAATACTCGCTCCCTTCGTTCCGAATTACTTGTCCCAGGTATAAATATATCTAAATGT
ATTTTAATTCTAGATACATCCATTTCTGTGACGAATAATCTAAAATGGACGGAGTACGTACTGCTCACCTCGATGAAGGT
CAATGGTGGTTTT----GTATGAGTAATCTGTACTCCC-------ATCTCCTAATCTGTTGGGTGGCTGGCAAATGCCAG
-AAG-GAAGGAGACGGAGGGGGTGGAATCATCTTTCTTATATTCTATTAACGGATAAAAAGCATACTCCTCCTCCTCATC
ATCTTGTCCATTGTTAGTTAT----TAAGCGCACCTTATCTATCCATCTCATCTCATCTC-----ATCTCAGATGCAGCA
CTATCATTGACCCATTATTCTATGCAAATCATATATGCAAAC--TTCATTGGCACATATAATCAGTGCACTGAACCCACC
TACATAATAAACACAAGGGGTAGGGGT--ATATTGTATCTCGCTGACGTGGCCTGATCCT----TCCTTGCTGGCAGTGC
CATCAGAGAACCTGGACACATGTCACCCCTCTTTTGTCCGACTAAGCATATCACCCAG----TATTACCAGCACATGTCA
CGCAGGCGGCTCGCAGCACCTGGTCATCCACGATTAATTAGCGAACAAAATTCAGAAGAAGCGACACGGAGATAATGCAG
GTTA----------ATA-CATGCGTATCGCGTCCGCGTCGATCTGATGTGACTGTCATGAGGCAAAATGTTAATAAATCA
AAGGGATGATTAGAAATTGCACCATGTGTCTTTCTGCCGTGTATTTTTATTCATTTTCGTATGGCCATTGATTGCCGACT
AAACTAAACTAAAAGATAGCGCAGCAATTTCCTTGGCTCGACGACTTTGAAAAGTCAGGCCACTTACAGCCGTTAACCCC
CCGCCTTGTGT---TCTCTGGCGTAATAAAGCCAGTGGTGGTGATAAAAAGGGTGAAAATGATGTGCCGGTTGCAAAGCA
AATCATCTGTTTATACGCACCGAACTTTACGTAGAGGTGATTATTCTCCCAGTGACCCAGTACGTACGAACTCCCTCCAT
TTCAAATTACTTGTCACAGGTATGAATGTATTTAGATATATTTTAGTTCTAGATATTTCGGGATGCCTGACGACCACTGT
TCATTTCTGCTCGATGATGACAAACGCCGGCTTGTCTTTAGCTCTGTGTCAGTGCAGTACCAGGTGTAGGGTAGCATGGT
GCGGTGGTAGTAG--------TTCGTGTCGTGTCCTGGGTCGACGTAGC-GGTTGGCGGGCCGGGCCGGGCGTGGGGCGT
CGCAGTCAGTCACTCTCACAACTGCTGACCTGTTCTTG---------------------CAGGCAATGGCGGCATGGGCG
GCGCTA------GAGGAGGGATGGGGAGCGGCTACGCGCACTCGCAGGGA---GG---AGGCAACGTCGACGCCGTGGCG
GCGCAGCAGAGGAGGCTGAGCTCGCAGTGGAGCTTCTCGAGGCAGCAGGACATGATGCCGCACATCGCGGAGATGGGGAT
GGCCATGCACACGCCCACGCCGATGCCGC---CGGCCGACGTCGGCGAGAGCATCGGCACCGGCCACGGCAACGGCTCCG
GCGACCTCTCCAGGAGCTTCTCCATGAGCTCCTGGGACGACACCAACTCCAACATCATCTTCTCCGCGCCCGGTGGCGG-
--CGGCAAGAAGGCCAAGCTGATGGCCGACGGCGACGACGGCATGGTCACCAGCTACAGCAACATCGACTCCCAGGTACA
GTACGCTCACATCATCACATGGCT------CATCCGGACTGTGTGCTGCCGCCATTGTTTACG---------CTTCTGAC
GCCTTGCTCCAAATT-----CAGTTTGGCTCGTCT--C-------TGGACATGCCTGGCATGGACGACTACCTGCAGCTG
CAGCAGGACTCCGTCGCCTGCAGGGTCCGCGCCAAGCGCGGCTGCGCCACTCACCCGCGGAGCATCGCCGA-GAGGGTCA
GTTAGCTTTCTCTCCGACATTATCGGCT-CCAACTTGACTTAAAATCACCAT--TACTCCTTGCATGTTCGCTGTCGATC
GGATGTTTAAACTGAAT-CATTTTCCTGTTTGTGATGTT--TATAGGAAAGAAGAACGAGGATCAGCAAGAGGCTT---A
GGAGGCTGCAAGACCTCGTGCCCAACATGGACAAGGTAACTAA----ACCAGTTGAATTATT-----GTTGGCAGTAATG
GGCAATGTCAACTTCGTCAGTTCTCGAAAA--------------------AATGCTGTCAGCAGACATGGATGGAATTTT
CACCAAGAATT---ATAGAAGCCCGTACTCACTAAAGTACTAATGCGTGACAATTTTCACCTAAACTG------------
----------GATGCATTTTGCCT--TG----------------------------AC--AAAAACCCAAAACCCAAGTA
GCTGTTAATCACCTGGACCT------------AGTTAATTCAGATTTCAGGATTGCAACCGTGCAT--------------
--------------CAGAAATATTAATAAGTTTCTTCTTGGTTATGCAGCAAACAAATACTTCTGACATGCTGGATATTG
CTGTTGACTACATCAAA----GTGCTGCAGGACCAAATCGAGGTATGCTCAGTGCTCACGC--CTGTGTTATA-------
--------------------------------TATATCACACCTCCAGTTCCAGGAGGCCTTG--TTAAAGA--------
-------CA------------------------------CATTGACATGTTTGCTTAAAAAAATACGCAAGTATGAAAAA
AAGTTGAAATAAAATTATTTATTATCTTTGGG--------------------------------------------TTTA
TGCAGAAACT-GAAACAGGACCAAGGAAACTGCTCTTGCTCAGCCGATCAGAAGTGCTGACGCCGAAAC-CCAGATATGT
GAGGTTATGTTTGTACCAATGTGATTAGCAAGCCCAAGTTTTGCTTCGGGAGATTAAGTTGTAAATGCCCTTCGTATCTC
AAGTAGTCTCCATATGCCTATCTTCC-------------------------------CCTTTCGTGGTTGTACTA--TGG
ATTACTAGTTTCAATGGCTTAAAGACTAGGAGGTGACAAGTAGAGTGTTGTAATTTGAGTATGTAAGGCATTGCCAATCT
TTCATTTCAACGCAAGTTGGATCGCTTCTGCTTATCATCATTTCCCCTCGTAAAATTAATGTAGGGATCCCCTACCTTGA
GTCATTCTCATGCTATCAAAGTTTAATTTTC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr7A_2827
--------------------------------------------------------------------------------
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------------------------------TGCTCTGGCTCTGTGACTGTGATGATGCACAGGCAATGGCGGCATGGGTG
GCATGAGAGGAA------GGATGGGAATCAGCTACTTGCATTCGCACGGA---GG---AGGCAACGTCGACGTGATGGCA
---CATCAGAGGAGGCTGGGCTCGTTGTGGAGCTTCTTGAGGCAGCAGGACATGATGTCGTCCATCACAGAGATGGAGAT
GGCCATGCCCGTGCC------GATGCCGCCCGCGG---ACGTCGGCGAGAGCATCGCTGC------CGGCAACGGCTTGA
GTGACCTCTTGAGGATCTTCTCCATGAGCACCTGGGACGACACCAACTCCAACATCATGTTCTCAGCGCCCGG---CA--
----GCAAGAAGGCCGAGGTGCTCGGCGACAGCGATGTCGGCATGGTCACTAGCTTCAGCAACATTGACTCCCAGGTA-G
GACAAACTTCACATATATACACTTCACATCCATCCGGACTCTCCCGCCTACCAATTGTTTAATGCTACACTTCTACTAAC
ACCTTGGTCCAGATT-----CAGTTAGCCCTCTCGAGC-------TGGACATGCCCAGCATGGACGACTACCTGCAGCTG
CAGCAGGACTCCGCCGACTGCAGAGTCCACGCCAAGCGTGGCTGCACCACTGATCCGCAGAGCATCGCTTGGGAGGGTTA
GTTAGTTTCCTGCAACATT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr3B_2979
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------TGGAGCTACTCGAGGCAGCCGGACATTATGCCACAC-----GGAGATGGGGAT
ATGGCCAT----GCCCGCGCTGATGCCGT---CGGCCAACGTCGGTGAGAGCATCACGGT------CGACAACGGCTCCA
ATGACCTCTTCAGGAGCTTCTCCATCAGCTCCTCGGACGACACCAGCTCCTATATCATGTTCTCCACACCCGG---AA--
----GCAAGAAGGCCAAGGTGCTCATCAACAGCGATGGCGGCATGGTCACCAGCCTCAGCAAAATCGAATCCCAAGTA-G
GATAAGCTTCACATGTATACACTTCACATCCATCTGCACTCTGTTGCCCGTCAATTGTTTAATGCTACACTTCTACTAAC
ACCTTGGATCAAATT-----CAGTTTGGCATGCCGACCACGTATTTGGACATGCCCGACATGGACGACTATCTGCAGCTG
CAACAGGACTTCATCGCCTGCACAGTCCGCATCAAGCATGGCTGCGCCACTCACCCGCGGAGCATCGCTGA-GAGGGTTA
GTTAGTTTCCTGCAATATT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr3A_3188
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----CAAGAAGGCCAAGGTGATGGCCGACGGCGACGACAGCATGGTCACCATCTTCAGCAACATCGACTCCCAGGTA-G
TACGTTTT------TGACATACCT------CATCCATACTCTGTGCT---GCCATTGTTTATG---------CTTCTAAC
ACCTTGCTCCAAATT-----CAATTTGGCTCGTCT--C-------TGGACATGCCCGGCATGGACGACTACCTGCAGCTG
CAGTAGGACTCCGTTGCCTATAGAGTCCGCGCCAAGTGTGGCTGCGCCACTCACTCGCGAAGCATCGCTGA-GAGGGTAA
GTTAGCTTTCTCCGCGACATTATCGACT-CCAACGTGACTTAACATTACCAT--TACTCCTTGCATGCTCGCTATCGATC
GGATGTTTAAACTGAAT-CATTTTCTTGCTTGTGATGCTTATATAGGAAAGAAGAAAAAGGATTATCAAGAGGCTT---A
GAAGGTTGCAATACCTCGTGCCCAACATGGATAAGGTGACTAA----ATCGGTTGAATTATTCTGTTGTTGTCAGTAATC
GGCACTGTTAATTCTGCCTCTTTTTA--TTTTCTTTTGCCAATTCCTGTCAATTCTTTCAACGGATAGGGATACAATTTT
CACCTAGAATTACAAAAGAAGCTCTTACTCACCACCAAAGTAATTACACTTAATGATTCTAAGTTTCTAACCTAA-----
-------ACTAAAGTATTACACTGTCTG----------------------------AC-AAAAAATTCAGAACCTCGGTA
GCTGTCGATGAGTTGGACCC------------AGTTACTTCATATTTTAGAATTAAATTTCTGCACCTAATCTCTGGGAG
AAGTCAACGTAGTACATACATATTACTAAGTTTGTTCTTGAATATGCAGCAAACAAATACTTCAGACATGGTCAACATTG
TTGTAGACTACATCAAA----GT------GGACCAAATTGAGGTATGCTCCACAGAGATACAACTGTGTTACA-------
--------------------------------TAGCACA------CACTTCCAGTAGGCCCTG--CTAAAAATATCATTT
TGCACTGCA------------------------------TGTTAACATGTTTCCTTAATTTTGTACACAAGCATAAACTG
ACTAGGTAATGACA-TATTTATTACCAGAATGAAAGGGA-----------GTAATATTTATTCATCTTAAAATGAAATCA
TGCAGAAACTAAAAACAGGACCAAGGAAACTGCTCATGCTGAGCCGATCAGAAGTGCTGACGCCGCAGAACCAGATATGC
GAGGTTATGTTTGCACCAGTGTGATTAGCAAGCCCAAGTTTTGCTTCAGTAGAT-AAGTTGTAAATGTCCTTCACA----
------------------------CCGCGTTTCAAGTAGTATCCATGCCCATTTCCCCCTTCTTTGGTTGTACTA--TGG
AT---TAGCTTCAATGGCTTCAAGACTAGGAGGTGACAAGTAGAATGTTGTAATTTAAGTAT-TAAGGCATTGCCAATCT
TTCATTTCAACGCAAGTTGGATTGCTTCTGCTTGTCATCATTTTTCCTGGTAAAATTATTGTAGGGATCCTCTGCCTTGA
GTCCATTTCTTGCTATCAAAGTTCATTTTTC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------
>chr3B_3554
--------------------------------------------------------------------------------
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--ATGTTTATACTGAAT-ATTTTTCTTGCTTATGCTGTT----TAGGAAAGAAGAACAAGGATTAGCAAGAGGCTGCTAA
GGAGGCTGCAACACCTCGTGCCCAACATGGACAAGGTAACTAA----ATCAGTTGAATTGAT--------GCACA-----
---------------------------------------------CTGTCAATTCTGTCACCACATAGAGACGAGATTTT
CACCATGAATT---GCAGAAGATCGTATTCTCTAAAGTACTAAAACTGACGACTACATGCCTACATATTTAGCGACATAA
ACTAACTACTAAAGTACTAAAACTGACGATCTAATCAAAAGTGGGAAGTGTTGCCCAT--GGAAATTCAGAACCTTTGTA
GTTGTTGATGACTCAGACCTTAGTTACTTCAGA-----------TTTCAGAATCGCATTTGTTCAGCTATTCTCTAGGAG
AAGTCGT-GCAATACAGACATATTAATAAGTTTCTTCTTGAATATGCAGCAAACAAATACTTCAGACATGCTGCGTATTG
CTGTAGACTACATCAAAGTGGGTGCTGCAGGACCAAATTGAGGTATGCTCAACATAGACACATCG--GTTATA-------
--------------------------------TAGCACA------CGCTTCCAGGAGGGCCTTGTTAAAACATATCATTT
TCCATTGCA------------------------------TA-TATCATGTTTCGATAATTTTGAG-ACAAGCACAAACTG
ACTA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr5B_3554
--------------------------------------------------------------------------------
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--ATGTTTATACTGAAT-ATTTTTCTTGCTTATGCTGTT----TAGGAAAGAAGAACAAGGATTAGCAAGAGGCTGCTAA
GGAGGCTGCAACACCTCGTGCCCAACATGGACAAGGTAACTAA----ATCAGTTGAATTGATGCACAGTTGCACA-----
---------------------------------------------CTGTCAATTCTGTCACCACATAGAGACGAGATTTT
CACCATGAATT---GCAGAAGATTTTCACCA---------------TGACGACTACATGCCTACATATTTAGCGATATAA
ACTAACTACTAAAGTACTAAAACTGACGATCTAATCAAAAGTGGGAAGTGTTGCCCAC--GGAAATTCAGAACCTTTGTA
GTTGTTGATGACTCAGACCTTAGTTACTTCAGA-----------TTTCAGAATCGCATTTGTTCAGCTATTCTCTAGGAG
AAGTCGT-GCAATACAGACATATTAATAAGTTTCTTCTTGAATATGCAGCAAACAAATACTTCAGACATGCTGCGTATTG
CTGTAGACTACATCAAAGTGGGTGCTGCAGGACCAAATTGAGGTATGCTCAACATAGACACATCG--GTTATA-------
--------------------------------TAGCACA------CGCTTCCAGGAGGGCCTTGTTAAAACATATCATTT
TCCATTGCA------------------------------TA-TATCATGTTTCGATAATTTTGAG-ACAAGCACAAACTG
ACTA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr3B_3777
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------TACACTGTCAG----------------------------ACGAAAAAATTCAGAACCTCGGTA
GTTGTCGATGAGTCGAACCC------------A-----------TTTTAGAATTACATTTCTACACCTAATCTCTGGGAG
AAGTCAACGTAGTACATACATATTACTAAGGTTCTTCTTGAATATGCAACAAACAGATAGTTCAGACATGCTCGACATTG
TTGTAGACTACATCAAAGTACTG-----AGGACCAAATTGAGGTATCCTCCACAGAGATACAACCGTGTTACA-------
--------------------------------TAGCACA------CACTTCCAGTAGGCCTTG--CTAACAATATCATTT
TGCACTGCA------------------------------TGTTAACATGTTTTCTTAATTTTGTACACAAGTATAAACTG
ACTAGGTAACGTCA-TATTTATTACTAGAATGAAAGGGAGTA-------------ACTTATTCATCCTTAAATGGAATCA
TGCAGAAACT-AAAACAGGACCAAGGAAACTGCTCCTGCTCAGCCGATCAGAAGTGCTGACGCCGCAGAACTAGATATGC
GAGGTTATGTTTGCACCAGTGTGATTAGCAAGACCAAGTCTTGCTCATG-AGAT-AAGTTGTAAATGTCCTTCGCATT--
--------------------------GCGTTTCAAGTAGTCTACATGCTCATCTTCTCCTTCCTTGGTTGTACTA--TGG
TT---TAGCTTCAATGGCTTCAAGACTAGGAGGTGACAAGTAGAATGTTGTAATTTAAGTAT-TAAGGCATTACCAATCT
TTCATTTCAATGCAAGTTGGATTGCTTCTGCTTATCATCATTTTGCCTGGTAAAATTATTGTAGGGATCCTCTGCCTTGA
GTCCATTTCTGGCTATCAAAGTTCATTTTTC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-------S-----S----------S-------------------
---------------SS---S-SSSSSSSSS------------S------S-------------------------S---
----SS-S-S--SSSS---------------------------------------------------------------S
---------------------------------------S---SSS-SS-SS---SSSSSSSSSS---------------
---------------------S--S---------S----------------S-S-----------------S-S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-S--S--------
---------------------------------------------------------------------S----------
--------------------------------------------------S-------------------S---SSSSS-
--------------------------------------------------------------------------------
--------------------S-S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------SSS-SS-S-SSSSSSSS-----S------------------------------SSSSS--------------
--------------------------------------------------------------------------------
------------------------------------------SS-SSS-SS-----------------------------
--------S-------S--SSS------------------------------------------SSSS------------
---------------------S----S------------------------S-----------S-------------SS-
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S---SS-SSSS--SSS----------------------------------------------------
S-------------------------------------------------------------------------------
-----S------------------------------------------------------------SSSSSSSSS-----
----------------------------------------------------------------------------S---
----S----------------------S-S-SSSSSSSSSSS---S--S---S---------------------------
--SSS-SSSSS--SSSSSSSS-SSSSS---------S-------------------------------------------
------------------S----------S-----------------------------------------------S--
-SS---S----------------------------------------SS-----------S-SSS---------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------S-----
-------------S------------------S--SSSSSSSSSS--------------S--------------------
-------------S-------SS-S-SS---------S-------------------------------S----------
--------------------------------------------------------------------------------
-----------S----------S-----------------S-----------------S---------------------
---------------------------SS-----------------------S-S-------S-----------------
---------------------------------S--------S-------S-S-------S--------S---------S
--------SS---------S------------------------------------S-----------------------
---------------------------------------------------------S-S----------------S--S
----SS--------------------------------------------SS-----SS----------S-S--S-----
-----------S---S----S------------------------------SS-------------------------SS
-SSSSSSS-S-SSS---S-S-----------SS--------------------------S--------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S------------------------------------------S------------------------S
SSSSSSSSSSS-SSSSSSSSS----------------------------S--S---------------------------
--SS----------------------------------------------------------------------------
----------------------------------S--------------S-----SSS---S------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
-------------------------------------------------------------------------S------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
---------------SSSS-------------------------------------------------------------
--------------------------------------------------------------------------------
-------S---------------S----------------S-----------SS-----------------S--------
--------S--------------------S--------------------------------------------------
--------------------------------------------------------------------------------
-------------------------SSS------------S------S-------------------S---S--S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S--------------S---S-----------
---------------------S----------------------------------------------------------
-S-----------------------------------------------------------------S------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
----------------------------------------------S--S--------S---------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
-----------------------------------------------------------------SS-------------
----S----------------------------------------------------------------S----------
-------------------------------------S-----------------------S----S-------------
------------------------------------SS--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1155
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GATTCGTCCGTCCATCCCAA---------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------
>reverse_4175
--------------------------------------------------------------------------------
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--------------AGCACTTTACACCGTGTCGT----------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------
>forward_4171
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------CGATCGATC
GCTAGCTTCCA---------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_5360
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------G
CGCTGCCTTCTGTTTCTTT-------------------------------------------------------------
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>forward_4935
--------------------------------------------------------------------------------
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-----------------------------------TATCTCGCTGACGTGGCATC-------------------------
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>reverse_6534
--------------------------------------------------------------------------------
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-----------------------------------------------------ATACTCCTTGCATGCTCGGT-------
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>forward_5003
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-----------------------CACCTCTCTTCTGTCCGACG-------------------------------------
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>reverse_7025
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----------------------------------------------------------------GCCTGTTCTCTGGGAG
AAGT----------------------------------------------------------------------------
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----------------------------------------------------
>forward_5697
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GGC
AGTTGTTCGTGACTTCG---------------------------------------------------------------
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----------------------------------------------------
>reverse_7977
--------------------------------------------------------------------------------
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--------------------------------------------------------CATGCTCTGCAACTTGACGC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
