>input_sequence_22286
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------------------------------------------------------------------------ATGGTGCT
GGATCTCAATGTCGAGTCGCCGGCGGACTCCGGCACGTCCAGCTCGTCCGTGCTCAACTCCGCGGACGCCGGCGGCGGCG
GCGGCTTCAGGTTCGGCCTGCTCGGGAGCCCCGATGATGACGACTGCTCCGGCGAGCCGGCGCCGGTCGGGTCCGGGTTC
GTGACGAGGCAGCTCTTCCCCGCGTCGCCGCCCGGTCACGCGGGCGCGCCCGGGATGATGACGGGGCAGCTGGCACCGGC
GC---CGCCGATGGCCCCCGTGTGGCAGCCGCGGCGCGCCGAGGAGCTCGTGATGGCGCAGCGGGTGGCGCCCGCGAAGA
AGACGCGGCGGGGGCCGAGGTCGCGGAGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCG
CACATCTGGTTAGC---CCTCTCATCTCCCTACTCATCCTCCATGACTATACTTA----CCAAATCATTAATCAATCGCT
GGCCTTTGTCCGTCTAATTCCACCAGGGACTGCGGGAAGCAGGTCTACTTAGGTGAGCTCC-ACAAATCCCTGCTAAAGC
TCCGATCTCCCCGGTGTCTAATTTCGATTATCTTAGCCATGTGTACTCGCAATTAACACTGGTTAATCTCTTCAGGTGGT
TTCGACACTGCGCACGCGGCCGCAAGGTGAATTTATTAATTAATCAGGCCTTGTTTGAATCCCTTTTACCCCGATTTGAC
CACGAACTGTGTACTGAGATGAGACGGTCCGGCATGGCGCAGGGCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGG
AGGCCGACATCAACTTCAATCTGAGCGATTATGAGGAGGATTTGAAGCAGGTAATCATCTAAGCTGTAAGCTATAATCTG
AGTAGAAGATTGTACTACCAAGTAGTGCGCCGGATA---ATATATCGGTGGTTTGTCCGATGGTTGATATCCGGTGGGTT
GGGCTTGTGTTTTTTGCCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATCCTCCGCCGCCAGAGCACGGGGTTC
GCCAGGGGGAGCTCCAAGTACCGCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGG
CAAGAAGTAAGCAGGCACACACACAGCTCACGCACTAAAATTAATTCACTTCGTCGACATTATCATAC---TAGTTTCTT
TAATCAAATGCCATATACAGTACAAGATTACGTTGAAATGAAATTCACAAG-CTGTTCATGAACCTGACACTTATTAGTA
GTAGATGTGACATGGCAGCTGTTCATGCTGTGGACGTTTAATGAGCCTGTCGTAGGTAATCAATCTTAGATGATATATTT
TGAAACATAACCTTAGCTGATTTAGGGTAGGGTCATCAAGTTAATCCATGTTGTTAGTTGTTGGCGCGTCCTGTGTTGGT
GCTGGTGAGACGTCCACTTCCCCCGACAC-----TC-GATTGCGGACATCTATTTGGAGCAACTGTTAGGTTCCAC----
----ATGATCGTGTTGTCCAAAAAATAATAATCTAATCCAATCCGTGCACATTATGGTCCAGACCTGGAATTGTCACCCT
ACACAC-----CCCCTATCTCCGTTGAGCTTTG-----ATGTCATATACCTGATATCCACATTATCATCGCA--CGCAGG
TACATATATCTTGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGTACTGTGATTATCCCTGATCATTAACATGCGG--A
CTCACAAAACTTCCTTAATTTCCGCTCACTGACTCTAGTGTCATGTTGGATTTGGTAGGGCGTACGACAGGGCGGCGATT
CGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCTCCACCCGACGCCGAAAATGA
GGGTACTACT--ACAATCAGTCTCACCCGTCGATTTTCTCCAATCACA-CCAAGTCTTATCTCGTTGATATCGTTGTTGT
TTTCATAGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTACGGATGTCGCAACCTACCGCGCACGATCCCAAGCGGG
ACAACATCATCGCCGGCCTTCAGTTAACTTTTGATTCCCCTGAATCGTCAACCACAATGCTCTCTTCTCAGGTAAAA---
--AAATTAATCATGTTTAGCACTAGCTAACTCAGTGGTCAGATTTGCTCCAATAGAAAATTTCCTGTTGGCCCAGTTGTG
TCGGTGGATGAGATATTATTCATCCAGGTCGTCTGGCATATACTCC-TCCTAAACTTACGATATTTGTGCCTTT-TGATA
TCGCTGTAGCCAATGAGCTCATCTTCTTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTAGCACCTCAGCAGCACCA
GCGTTTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGT---ATCGTCACTACGAGAACGACCCC-----G
TCCTCCTCCTCCTCCT---CTGCTTGGTGCGCTGCTCCACCAGCTTACTGAAACTGTTGCTACTACTGCATAATGTTTCA
CAAGAAACTGTTAATAACATTT-CACTTTTTGACAAGTTCATTCCTGAAATTAAGGTTTACATGTTTCTTTCCCTGGTAA
AACTAATCATGCCTGCTCTCCTAAAAACATCTACAAGTACTAATCATTGACTGAG-----------------CTGAGCTG
CTTGCTTTTTTGAAACGAAACGCAAGCTTTTTCATTGGCATCTCGTCTCATGGACAGA----GCATGCTGTGTAGTAGTA
CCAGAGAACTTACTAGATGTGGGTGCTACTGTTTCCCCTGTGAGCTCTCCTGATTGATGGTTCCGTGAGCTTGCACCACC
TTTC-G-AAAAAACTGCAGTGCGTCCTCCGGTTCTTACAGTCCCATCCGTCCTCCATGACACAGCTTTAGATGTA-----
--------------------------------------------------------------------------------
----------------------------------------GCTTGCTTAGTTGTA---GTAGTACCATGATCACATGGCG
CAGCTTTATTCTTGGTGGACACTGTGCATTCACATGAAAGCAAGCTTTGCTGCGTGCATGCACGGCCATGACTTGACACT
CTCTCTCGCGTTGTTGCCACTGCAGGTGCAGGTGCAGGTGCAGGAGAGGCCCATGGAGCCAAGGCCCCCTGAGCCGCCGT
CGTGCTTCCCCAGCTGGGGGTGGCAAGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCA
TCATCAGGATTCTCTA---CCGCCGCCGGCGCGCACCCCGCCCCGCCGCCGCCGCCGTCGTACCCGGATCACCACCGGTT
CTACTTCCCCCGCCCGCCGGACAACTAG----------------------------------------------------
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-------------------------------------
>chr5D_1_TraesCS5D01G486600
ACGTCCGTACTTTACCCTTTCTTTGCATTGGAAACATATTTATGTAGTACTT----GGGCGGTTTTTATACTTGCATCTT
CGAGAACGTCCAGAGTCTTCGGCATAACACCTTTCTAGTTGCAGGCCTGATTCGCACGAGGTGCTACTTGGTTGTTTTAT
ATAAAATGATATAATACTATAATACCCTGTCTTGATGGGACTAAATTACTTAGCAAGTTGACACTTATTTATGTTTAGCT
TGAGGAACGTCCAACGTCTTCGGTGTAAGACCTTTCTAGCCGCATATCTGATTCAAACAAGATGGTACTTGATTCTATAT
AAAAACAAATGTATTATAATACTCATCTCCGCAACAATTAAATTACTCTGTAACTTGATATTTTATATCTTTAGTTTTGG
CATCTAATACCAGACCAGACGTCGACATAGAAATGAGTTGCAATT------TCAAGAGATAGAACACATGGTTTGTTCCA
AACTCGAGCTCTAGATCGACCAAACTAGCAGCCTATATATTTCTGAGTCATTTTTACCTTT------TGTAAAGAA----
--------------AAAATGTTGAAGGCGGCTGTCCGGGCCAAAAAAAAC--CTCGGTTGATCCGCCTCGGAGGGCGACA
CGTGGCGTCCCCATCCGCGGGGTGTGTGGGCGTAGCGATTAGCGAAGCTCCGCTGCACAAAAATAGTTTACCTCTGATGC
CCTTGGCCTCCCCGACGTCCCATCTCGCTTTCTTTCTCTCTCTCTCTTTCTCCCACTGGCCT----GGCCCCCTCTCCTC
GTCGTCCTCCAGTCCTCATCCCCCCGCCCCATGGCCACCACCACCACCGCCTCCTCCCCCTCCCCCTACCACTACTTCTA
CTCCCCCCGCCTCGCCCTCGCAGCCCGCGGCCGCCGCGCTCCCATGCCATAGACGCGACCCC------------------
--------------------------------------------------------------------------------
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------------------------------------------------------ACTCATCGGTCGAGGTCGGTCGCTCC
GAGGCGAGCGGCGGCGGGAGAGGCGGTGGGTCAAGCGAGTTTCGGAGGCGCCCGGCGGGCCTCGGATCGGAGATGGTGCT
GGATCTCAATGTCGAGTCGCCGGCGGACTCCGGCACGTCCAGCTCGTCCGTGCTCAACTCCGCGGACGCCGGCGGCGGCG
GCGGCTTCAGGTTCGGCCTGCTCGGGAGCCCCGATGATGACGACTGCTCCGGCGAGCCGGCGCCGGTCGGGTCCGGGTTC
GTGACGAGGCAGCTCTTCCCCGCGTCGCCGCCCGGTCACGCGGGCGCGCCCGGGATGATGACGGGGCAGCTGGCACCGGC
GC---CGCCGATGGCCCCCGTGTGGCAGCCGCGGCGCGCCGAGGAGCTCGTGATGGCGCAGCGGGTGGCGCCCGCGAAGA
AGACGCGGCGGGGGCCGAGGTCGCGGAGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCG
CACATCTGGTTAGC---CCTCTCATCTCCCTACTCATCCTCCATGACTATACTTA----CCAAATCATTAATCAATCGCT
GGCCTTTGTCCGTCTAATTCCACCAGGGACTGCGGGAAGCAGGTCTACTTAGGTGAGCTCC-ACAAATCCCTGCTAAAGC
TCCGATCTCCCCGGTGTCTAATTTCGATTATCTTAGCCATGTGTACTCGCAATTAACACTGGTTAATCTCTTCAGGTGGT
TTCGACACTGCGCACGCGGCCGCAAGGTGAATTTATTAATTAATCAGGCCTTGTTTGAATCCCTTTTACCCCGATTTGAC
CACGAACTGTGTACTGAGATGAGACGGTCCGGCATGGCGCAGGGCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGG
AGGCCGACATCAACTTCAATCTGAGCGATTATGAGGAGGATTTGAAGCAGGTAATCATCTAAGCTGTAAGCTATAATCTG
AGTAGAAGATTGTACTACCAAGTAGTGCGCCGGATA---ATATATCGGTGGTTTGTCCGATGGTTGATATCCGGTGGGTT
GGGCTTGTGTTTTTTGCCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATCCTCCGCCGCCAGAGCACGGGGTTC
GCCAGGGGGAGCTCCAAGTACCGCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGG
CAAGAAGTAAGCAGGCACACACACAGCTCACGCACTAAAATTAATTCACTTCGTCGACATTATCATAC---TAGTTTCTT
TAATCAAATGCCATATACAGTACAAGATTACGTTGAAATGAAATTCACAAG-CTGTTCATGAACCTGACACTTATTAGTA
GTAGATGTGACATGGCAGCTGTTCATGCTGTGGACGTTTAATGAGCCTGTCGTAGGTAATCAATCTTAGATGATATATTT
TGAAACATAACCTTAGCTGATTTAGGGTAGGGTCATCAAGTTAATCCATGTTGTTAGTTGTTGGCGCGTCCTGTGTTGGT
GCTGGTGAGACGTCCACTTCCCCCGACAC-----TC-GATTGCGGACATCTATTTGGAGCAACTGTTAGGTTCCAC----
----ATGATCGTGTTGTCCAAAAAATAATAATCTAATCCAATCCGTGCACATTATGGTCCAGACCTGGAATTGTCACCCT
ACACAC-----CCCCTATCTCCGTTGAGCTTTG-----ATGTCATATACCTGATATCCACATTATCATCGCA--CGCAGG
TACATATATCTTGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGTACTGTGATTATCCCTGATCATTAACATGCGG--A
CTCACAAAACTTCCTTAATTTCCGCTCACTGACTCTAGTGTCATGTTGGATTTGGTAGGGCGTACGACAGGGCGGCGATT
CGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCTCCACCCGACGCCGAAAATGA
GGGTACTACT--ACAATCAGTCTCACCCGTCGATTTTCTCCAATCACA-CCAAGTCTTATCTCGTTGATATCGTTGTTGT
TTTCATAGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTACGGATGTCGCAACCTACCGCGCACGATCCCAAGCGGG
ACAACATCATCGCCGGCCTTCAGTTAACTTTTGATTCCCCTGAATCGTCAACCACAATGCTCTCTTCTCAGGTAAAA---
--AAATTAATCATGTTTAGCACTAGCTAACTCAGTGGTCAGATTTGCTCCAATAGAAAATTTCCTGTTGGCCCAGTTGTG
TCGGTGGATGAGATATTATTCATCCAGGTCGTCTGGCATATACTCC-TCCTAAACTTACGATATTTGTGCCTTT-TGATA
TCGCTGTAGCCAATGAGCTCATCTTCTTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTAGCACCTCAGCAGCACCA
GCGTTTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGT---ATCGTCACTACGAGAACGACCCC-----G
TCCTCCTCCTCCTCCT---CTGCTTGGTGCGCTGCTCCACCAGCTTACTGAAACTGTTGCTACTACTGCATAATGTTTCA
CAAGAAACTGTTAATAACATTT-CACTTTTTGACAAGTTCATTCCTGAAATTAAGGTTTACATGTTTCTTTCCCTGGTAA
AACTAATCATGCCTGCTCTCCTAAAAACATCTACAAGTACTAATCATTGACTGAG-----------------CTGAGCTG
CTTGCTTTTTTGAAACGAAACGCAAGCTTTTTCATTGGCATCTCGTCTCATGGACAGA----GCATGCTGTGTAGTAGTA
CCAGAGAACTTACTAGATGTGGGTGCTACTGTTTCCCCTGTGAGCTCTCCTGATTGATGGTTCCGTGAGCTTGCACCACC
TTTC-G-AAAAAACTGCAGTGCGTCCTCCGGTTCTTACAGTCCCATCCGTCCTCCATGACACAGCTTTAGATGTA-----
--------------------------------------------------------------------------------
----------------------------------------GCTTGCTTAGTTGTA---GTAGTACCATGATCACATGGCG
CAGCTTTATTCTTGGTGGACACTGTGCATTCACATGAAAGCAAGCTTTGCTGCGTGCATGCACGGCCATGACTTGACACT
CTCTCTCGCGTTGTTGCCACTGCAGGTGCAGGTGCAGGTGCAGGAGAGGCCCATGGAGCCAAGGCCCCCTGAGCCGCCGT
CGTGCTTCCCCAGCTGGGGGTGGCAAGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCA
TCATCAGGATTCTCTA---CCGCCGCCGGCGCGCACCCCGCCCCGCCGCCGCCGCCGTCGTACCCGGATCACCACCGGTT
CTACTTCCCCCGCCCGCCGGACAACTAGCTCTCTCTCTCTCTCTCTCTGCTTGCTCGGCCATGGACGGTGGCCGACGAGC
TTGTGTGTGTTGGAGGTGCTCCCGCCTCGTCGGTAACAGTTGTTGTGAAT---TAATCGGAGAGAGACACACGTTGCCAG
GCCATGTGTGAGTGTGACTGGCTGAGGCTGGTTTCTCTCCGCGTCGGCGTCGCCATGATCAGGATCACGGGCATCATGGC
TGCTCGTTATTAGATTCTCATGTATCCATTGCTCACGTTTTCCAAACAG----TTGAAAAAACTTGGAAATTGTTGATGG
CAAGTTCATGCATGGATGGATCACACTGGTGCCCTTGCAGAAGAGCGGGGAAGCACAGTCTGTTGTTTTA----------
CCGTTGGTGCGTTAACCGTTGGGCTTTTCTGACCGAGGACGAGCGGCGATTGACAGGTGGGTCCCACCCGGACGCGACGG
GTGGGCAGTGAGGAGGCAGCGAGCTACTG----------GGTGAGGTGAGTAGGCTGGGCTAGGCGGTCAGTGATTGTTC
GTTGCCATCGTCCATTCTGGGAGCGAC-----CTCTGATTGATGGGCCGTAACTGCGGCTGGAGTGGT---------AGC
CAATCCCCTGGTGAGGTGAGTAC---------------------TCAATCCCGCACAGTGAAGTGAAAGCCTTTGAGGCT
GTTCGGGTGTGCCCTGCCCTCCCCTGACCTTGTGGCGCTAGCCAGCTATCTTTG--------------------------
-CCACCCACCCACCCATCCATCCACAATAGCAAAGCTAGTATGTACTGTAGTACCAGTACTGTGCC----------AGTA
GTAGGCTGTAGCCTGTAGGTGCGCGTGGGGG-------CGCTCTCGCTGTGGCCGGCCGTGCAGCACACC----------
----GCACTGGAGCAGAGCAGTGGAGCGGCCCAGCCGGAGCGGAGTGGCTTCTCGTCCGTTGCCCCCAATGGCGCCGCGC
CGTGTGTGCAGTGCCGCGGCAGCGCCAGAGCATGCATCA--------CTCCCTCCGCGGCGCCGCTGCATGCATCACTCC
CT-CCCACCCTCTTTTGGCGACCCGTGCGTGCTCTCC
>chr5A_4
---TCCATACTTTACTC-TTCGTTGCACTACAAACATATTTTGTGATGTACGCTCCGTGTGATATATATACTTGTATCTT
TAGAAAGGCCTAGAGTCTTAGGTGTAAGACCTTTCTAGCTGCAGGCCTGATTCGCACAAGGTGCTACTTGGTTGTTGCAT
ATAAAAAACGGTAATACTATAATACTCTGTCCCTCCGGGACTAAATTACTTAGCAAGTTGACATTTGTTTATATTTAGCT
TCGGGAACGTCCAACGTCTCCGGTGTAAGACCTTTCTAGTCGCATTCCTGATTCAAACAAGATGCTACTTGGTTGTATAT
AAAATGATTGGGC-TATAATACTCCTCTTCGCAACAATTAAATTACTCAGTAGGTGAACATTTTATATATTCAACTCTAG
CATATAATACAAATTTGT-TGTCGGCATAGAAATGAGTTGCAATCATTTCATAAATAGGAAGAACACATGGCTTAT----
------------------ACCAAACTAGCAGCCTAA---------AAAGGTTTTTTTTTCTTCTTTCTGAGAGGAGGCAT
TTAGCTTGTGGAGCAAAATGTTGAAGCGGCT------GGGCGAAAAAACC--CTCGGCTGATCCGCGTGAGGGCACGACA
CGTGGCGTCCCGGTCCACGGGGTGTGTGGCCGTAGCGATTAGCGAGGCTCCGCTGCACAAAAATAGTTTACCTCTGATGC
CCTTGGCCTCCCCGACGTCCCATCTCGCTTTCTCTCTT----TCTCTTTCTCCCACTGGCCT----GGCCCCCTCTCCTC
GTCGTCCTCCAGTCCTCATCCCCC-GCCCCATGGCCACCACCACCACGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATCGGTCCAGGTCGGTCGCTCG
GAGCCGAGCGGCGGCGGGCGGGCGAGGAGTGCGTTTTATTCGGT------CCCGGCGGGCCTCGGATCGGAGATGGTGCT
GGATCTCAATGTGGAGTCGCCGGCGGACTCGGGCACGTCCAGCTCCTCCGTGCTCAACTCCGCGGACGCCGGTGGCGGCG
GC---TTCCGGTTCGGCCTGCTCGGGAGCCCTGATGATGACGACTGCTCCGGCGAGCCGGCGCCGGTCGGGCCCGGGTTC
GTCACGAGGCAGCTCTTCCCCGCGTCGCCGCCCGGGCACGCGGGCGCGCCCGGGGTGACGATGGGGCAGCAGGCCCCGGC
GCCTGCGCCGATGGCGCCCGTGTGGCAGCCGCGGCGCGCCGAGGAGCTCCTCGTGGCGCAGCGGATGGCGCCCGCGAAGA
AGACGCGGCGGGGCCCGAGGTCGCGCAGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCG
CACATCTGGTCAGCCCTCCTCTCGTCTCCCTACTCCTCCTCCATGACTATAGTTATTACCCAAATCACTAATCAATCGCT
GGCCTTTGTCCGTCTGATTCCACCAGGGATTGCGGGAAGCAGGTCTACTTGGGTGAGCTCAAACAAATCCCAGCTCGAGC
TCCGATCTCCTCGGTGTCTAATTTCGATTATCTTAGCTGTATGGGCTCGTGATTAACACTGGATAATTTCTTCAGGTGGT
TTCGACACTGCGCACGCGGCCGCAAGGTGAACTAATTAATTAACCAGGCCTCGTTTGAATTCCTTTTGCCCCGATTTGGC
CACGAACTGTGTACTGAGATGAGACGGTGTGGCGTGGCGCAGGGCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGG
AGGCCGACATCAACTTCAATCTGAGCGACTACGAGGAGGATTTGAAGCAGGTAATCTTATCCAAGCCTAGTTGATTGC--
----------TGTACTACCAAGTAGTGCGCCGGATACATATGTATCGGTGGTTTGTCCGATGGTTGATATCTGGTGGGTG
GTGGTGGTGTTTTTTGCCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATCCTCCGCCGCCAGAGCACGGGGTTC
GCCAGGGGGAGCTCCAAGTACCGCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGG
CAAGAAGTAAGCAGGCACACACACAGCTCACGCACTAAAATTAATTCACTTCGCCCACATTATCATAGTAGTAGTTTCTT
TTATCAAATGCCATTG-----ACAAGATTCAGTTGAAATGAAATTTCACAGACTGCTCATGAACTTGACACTAATTAGTA
GTAGATGTGACAGGGCAGCTGTTCATGCTGTGGACGTTTAATTAGCCTGTCGCAGGTAATCATCTTAGATTACCCC-TTT
TGAAACATAATCTTAGCTGGTTTAGGGTAGGGTCATCAAGTTAATCCATGTTGTTAGTTGTTGGCGCGTCCTGTGTTGGT
GCTGGTGAGACGTCCACTTCCCCCGACACGACACTC-GATTGCAGACATCTATTTGGAGCAACTGTTAGGCTCCACATAA
GTATATGATCGAGTCGTCCAGACAAAATTAGTCTAATCCAATCCGTGCACATTATGGTCCAGACCCAGAATTGTCACCCT
ACACCTTCACACCCCTATCTCCGTTGAGCTGTGGTCTCATCTCATATACCTGATACCCACATTATCATCACACGCGCAGG
TACATATATCTGGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGTACTTTGATTTGCGCTGATCATTAACATTTGG--G
CTCACAAAACTTCCTTAATCTTTGCTCACTCACTCTAGTGTCATGTTGGATTTGGTAGGGCGTACGACAGGGCGGCGATT
CGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCTCCACCCGACGCCGAAAATGA
GGGTACTACT--ACAATCGGTCTCACCTGTCGAATTTCTCCAATCACACCCAAGTCTTATCTCATCGATATCGTTGTTGT
TTTCTTAGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTGCGGATGTCGCAACCCACCGCGCACGATCCCAAGAGGG
ACAACATCATCGCCGGCCTTCAGTTAACTTTTGATTCCCCTGAATCGTCAACCACAATGATCTCTTCTCAGGTAAAGAAA
CAA----AATTATGTTTAGCACTAGCTAATTCAGTGGTTAGATTTGCTCAAATAGAAAATTTGCTGTTGGCCCAGTTGTG
TCGGTGGATGAGATATTATTGATCCAGGTCGTATGGCATATACTCTGTCCTAAACTTACGATATTTGTGCCTTT-TGATA
TCGCTGTAGCCAATGAGCTCATCTTCGTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTAGCACCTCAGCAGCACCA
GCGTTTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTATCATCATCACTACGAGAACGACCAC-----C
TCCTCCTCCTCCTCCTCCTCTGCTTGGTGCGCTGCTCCACCAGCTTACTGAAACTGTTGCTACCACTGAATAATGTTTCT
GAAGAAACTGCTAATAACATTTTCAGTTTTCGACAAGTTCGTTCCTGAAATTAAGGTTTCCATGCTTCTTTCC----TAA
AACTAATCACGCCTGCTCTCCTAAAACATCTACAG-GTGCAAGAATTTTGGGTGTAGTGATGTGTCTGTTGACTGA----
-------------------------------------GCATCTCGTCTCATGGACAGACAGAGCATGCTGTGTGGTAGTA
CCAGAGTACTTACTAGATGTGGGCACTACTGTTTGCCCTGTGAGCTC-------------------------GCACCACC
TTTC-GAAAAAAACTGCAGTGCGCCCTCCGGTTCTTGCAGTTCCATCCGTCCCCCATGGCACAGCTTTAGATGCA-----
--------------------------------------------------------------------------------
----------------------------------------GCAGCAGCTTGCTTAGTTGTAGTACCCTGATCACATGGCG
CAGCTTTATTCTTGGTAGCCACTGTGCATTCACATGAAAGCAAAGCTTTG---GTGCATGCACGGCCATGACTTGACGCT
CTATCTCACTGCTGG-----TGCTGGTGCAGGTGCAGGTGCAGGAGAGGCCCATGGAGGCAAGGCCCCCTGAGCAGCCGT
CGTCCTTCCCCGGCTGGGGGTGGCAAGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCA
TCATCAGGATTTTCTACCGCCGCCGCCGGCGCGAACCTCGCCCCGCCGCCGCCG---TACCCGGAC---CACCACCGGTT
CTACTTCCCCCGCCCGCCGGACAACTGAAGCTGGCCGTTGTGACCAGACGGCGGTGGGTGCGCGCGGTCGAGGTGTTCGC
T--------------------CCTCGTCGTCGGTAACGCTTGTTGTGAAACTATAATCGGAGAGAGATG-ACATTGCCAG
GCCATGTGTGGTGACACTACT----GGCTGGTCTCTCGCC------GCCTCGCCATGATCGGGATCACGCGGATCATGGC
TGTTC---ATTAGATTCTCATGTATCCAATGTTCAAGTTTCCCAAACGG----TTGAAAAAACTTTGAAATTTGTGATGG
CAAATTCATGCATGGGTCG--CACGGTGC-GCCCTTGCACAAGCGCGGGGAAGCAC--TCTGTTGTTTTACAGCAGTCCG
CCATTGTTGCGTTAACCGTTGGGCC-TTCTGGCCGAGGGCGAGCGGCGATTGACAGGCGGGCCCTCCCCGGACGCGACTG
GTGG------------------GCGACTAGGTGAGGTGAGGTGAGGTGAGTAGGCTAGGCGGTG-GGTCAGTGATTGTTC
GTTGCCATCCTCCATTCTGGGAGGGGAGCAAGCTGTGATTGATGGGCCGTAAACCGCAGCAGGCATCACCTTTTTCTCCT
CGCTTCCTA----------------------------------TTCAATCCCGCACAGTGAAGTGAAAGCCTTTGTGGGT
G--------------------CCCCGGCCTTGTGGCGCTAGCGATAGCTAATAAGCCAGCTACCCATGTTTGCCACCCCA
CCCACACACCCATCCATCCATCCACAATAGCAAAGCTACCCGTAGTACTATACCAGCGCCACTGTGCCATGCCAGTAGTA
CTACGCTGTAGCCTGTAGCTGAGCGTGGGGCTCGCTCTCGCTCTCGCTCTGGCTGGCCTGGCCGTGCAGAGTGCGCTAGA
GCGGGCACTGGAGCGGCACAGT---GCGGCCCGGCCGGAGCG-----GCTTCTCGTCCGCTGCGCCCAATGGCGCCGCGC
CGTGTGTGCAGC---GCCAGAGCAT----GCATGCGTCGCGCCCGCCCTCCCTCCGCGGCGCCGCTGCAGA---------
ATCCCCACCCTGTTTTGGCGATTCGTGCG--------
>chr5B_4
---TCCGTACTCTACTC-TTTGTTGCATTGGAAACATATTTATGTAGTACTT----GGGCGGTTTTTATATTTGCATCTT
CGAGAACGTCCAGAGTCTTCGGCAAAAGACCTTTCTAGCTGCAGGACTGATTCGCACAAGGTGCTACTTGGTTGTTT--T
ATATAAAATGGTAATACTATAATACCCTGTCCTGATGGGACTAAATTACTTAGCAAGTTGACATTTATTTATGTTTAGCT
TGAGGAGCGTCCAACGTCTTTGGTGTAAGACCTTTCTAGTCGCACATCTGATTCAAACAAGATGCTACTTGATTCTATAT
AAAACAATTA-TATTATAATACTCATCTTCGCAGTGATTAAATTACTCTGTAACTTGACATTTTATATCTTTAGCTTTGG
CCTCTAACACCAAACCATATGTCGACATAGAAATCAGTTGCAATCATTTCA-CGAGAGAAAGAACACATCATTTAT----
------------------AGGTCATTTATCTC----ATTTTTCTCAAACGTTTTTTTTTAT------TGAAAGGAGGCAT
TTACCTTGTGGAGCAAAATGTTGAAGGCGGCTGTCCGGGCCAAAAAAAAAAACTCGGTTGATCCGCCTGGGAGGGCGACA
CGTGGCGTCCCCATCCGGGGGGTGTGTGGGCGTAGCGATTAGCGAAGCTCCGCTGCACAAAAAAAGTTTACCTGTGATGC
CCTTGGGCTCCTCGACGTCCCATCTCGCTTTCTTTCTT----TCTCTTTCTCCCACTGGCCTGGGAGGCCCCCTCTCCTC
GTCGTCCTCCAGTCCTCATCCCCCCGCCCCATGGCCACCACCACCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CGGAGATGGTGCT
GGATCTCAATGTCGAGTCGCCGGCGGACTCCGGCACGTCCAGCTCGTCCGTGCTCAACTCCGCGGACGC------CGGCG
GC---TTCCGGTTCGGCCTGCTCGGGAGCCCCGATGACGACGACTGGTCCGGCGAGCCGGCGCCGGCCGCGTCCGGGTTC
GTGACGAGGCAGCTCTTCCCCGCGTCGCCGCCC------------GCGCCCGGGATGATGATGGGGCAGCAGGCCCCGGC
GC---CGCCGATGGCCCCCGTGTGGCAGCCGCGCCGCGCCGAGGAGCTGGTCGCGGCGCAGCGGGTGGCGCCCGCGAAGA
AGACGCGGCGCGGGCCGAGGTCGCGGAGCTCGCAGTACAGTGGTAGTC--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AGTGCGCCGGATA---ATATATGGGTGGTTTGTCCGATGGTTGATATCCTGTGGGTG
GTGGTGGTGCTTTTTGCCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATCCTCCGCCGCCAGAGCACGGGGTTC
GCCAGGGGGAGCTCCAAGTACCGCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGG
CAAGAAGTAAGCAGGCACACACAC-----------TAAAATTAATAAATTTCATCCACATTATCATAC---TAGTTTCTC
TAATCAGATGCCATATACAGTACAAGATTACGTTGAAAAGAAATTCACAAG-CTGTTCATGAACTTGACCCTAATTAGTA
CTAGATGTGACAAGGCAGCTGTTCGTGCTGTGGACGTTTAATTAGCCTGTCGTAGGTAATCATCTTAGATTATCCC-TTT
TGAAACATAATCTTAGCTGGTTTAGGGTAGGGTCATCAAGTTAATCCATGTTGTTAGTTCTTGGCGCGTCCTGTGTTGGT
GCTGGTGAGACGTCCACTTCCCCCGACAC-----TCTGATTGCAGACATCTATTTGGAGCAACTGTTAAAGGTTCCACA-
-TATATGATCGACTTGTCCAAACAAAATTAATCTAATCCAATCCGTGCACATTATGGTCCAGACCCGGAATTGTCACCCT
ACACAC-----CCCCTATCTCCGTTGAGCTGTG-----ATCTCATATACCTGATATCCACATTATCATCGCACGC--AGG
TACATATATCTTGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGTACTGTGATTATCCCTGATATCCACATTAAGGAAG
CTCACAAAACCTCCTTAATTTCCGCTCACTCGCTCTAGTGTCATGTTGGATTTGGTAGGGCGTACGACAGGGCGGCGATT
CGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCTCCACCCGACGCCGAAAATGA
GGGTACTACAACACAATCAGTCTCACCTGTCGATTTTCTCCAATCACACCCAAGTCTTATCTCATTGATATCTTCGTTGT
TTTCTTAGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTTCGGATGTCGCAACCTACCGCGCACGATCCCAAGCGGG
ACAACATCGTCGCCGGCCTTCAGTTAACTTTTGATTCCCCTGAATCGTCAACCACAATGCTCTCTTCTCAGGTAAAGAAA
TTAAATTAATCATGTTTAGCACTAGCTAGCTCAGTGGTTAGATCGCTGGAATAGAAAAAATTCCTGTTGGCCCAGTTGTG
TCGGTGGATGAGATATTATTGATCCAGGTCGTATGGCATATACTCC-TCCTAAACTTACGATATTTGTGCCTTTTTGATA
TCGCTGTAGCCAATGAGCTCATCTTCTTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTACCACCTCAGCAGCACCA
GCGTTTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTATCATC---ACTACGAGAACGACCCCTCCTCC
TCCTAGTCCTCATCCT---CTGCTTGGCGCGCTGCTCCACCAGCTTACTGAAACTGTTGCTACTGCTGAATAATGTTTCA
GACGAAACTGTTGATGACATTT-CAGTTTTTGACAAGTTCATTCCTGAAATTAAGGTTTCCATGTTTCTTTCCTGGTG-A
AACTAATCATGCCTGCTCTCCTAAAAACGTGTACAAGTGCTGGAATTCTGGGTGTAGTGATGTGTCTATTGACTGAGCTG
CTTGCTTTTTTGAAACGAAACGCAAGCTTTTCG-TTGGCATCTCGTCTCATGGACAGA----GCATGCTGTGTAGTA---
CCAGAGTACTTG------------------GTTTCTCCTGTGAGCTT-------------------------GCACCTCC
TTTCAGAAAAAAACTGCAGTGCGTCCTCCGGTTCTTACAGTTGCATCCGTCCTCCATGACACAGCTTTAGATGTACTCCC
TCCGTTCTGAATTACTTGTCTTAAATTTGTCTAGATACGGATGTATCTAGACTCATTTTAGTGCTAGACATATCTGTATC
TAGACAAATCGAAGACAAGTAATTTGGAACGGAGGGAGTAGCTTGCTTAGGTGTA---GTGGTACCCTGATCACATGGTG
CAGCTTTATTCTTGGTAGACACTGTGCATTCACATGAAAGCAAGCTTTGGTGCTTGCATGCACGGCCATAACTTGACGCT
CTCTCTCT--------------------CAGGTGCAGGTGCAGGAGAGGCCGATGGAGGCAAGGCCCCCTGAGCCGCCGT
CGTGCTTCCCCGGCTGGGGGTGGCAAGCGCAAGCCACGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCA
TCATCAGGATTCTCTA---CCGCCGCCGGCGCGCACCCCGCCCCGCCGCCGCCG---TCGTACCCGGATCACCACCGGTT
CTACTTCCCCCGCCCGCCGGACAACTAGCTCTCTCTCTCTCTCTCT--GCTTGCTCGGCCACGGACGGTGGCCGACGCGC
GTGTGTGT--TGGAGGTGCTCGCGCCTCATCGGTAGCCGTTGTTGTGAATTAATCG------------------------
---------GAGTGTGACTGGCCCAGGCTGGTTCCTCTCC------GCGTCGCCGTGATCAGGATCACGAGCATCGTGGC
TGCTCGTTATTCGATTCTCATGTATCCATTGCTCAAGTTTCCCAAACAGACTCTTGAAAAAACTTGGAAATTGTTGATGG
CAAGTTCATGCATGCATGGGTCACATTGC-GCCCTTGCCGAAGAGCGAC--------GTCTGTTGTTTTA----------
CCGTTGGTGCGTTAACCGTTGGGCTTTTCTGACCGAGGACGAGCGGTGATTGACAGGTGGGGCCTACGCGGACGCGACGG
GTGGGCAGTGAGGAGGCAGCGAGCGACTGGGTGAGGTGAGGTGAGGTGAGTAGGCCGGGGTAGGCGGTCAGTGATTGTTC
GTTGCCATCCTCCATTCGGGGAGCGAC-----CTCCGATTGATGGGCCGTAACCGCAGCTGGAGTCGTGTCACTTTTAGC
CAATCCCCTTCATTATTTTTTTCCCTTTTCCCTTCCTCTTCACTTCAATCCCGCACAGTGAAGTGAAAGCCTTTGAGGCT
GTTCGGGTGTGC---------------CCTTGTGGCGCTAGCCAGCTATCTTTGCCA-------------------CCCA
CCCACCCATCCAACCATCCATCCACAATAGCAAAGCTAGTA---------GTACTGGTACTGTGCC----------AGTA
GTACGCTGTAGC----------GCGTGGGGG-------CGCTCTCGCTCTGGCTGGCCGTGCAGCACACTACCTACAGTG
---------------GAGCAGAGCAGTAGCCCAGCCGGAGCG-----GCTTCTCGTCCGTTGCCCCCAATGGCGCCGCGC
CGTGTGTGCAGCCGCGCCAGAGCAT----GCATGCGTCA--------CTCCCTCCGCGGCGCTGCTGCATGCACAGAGCG
ATCCCCACCCTCCTTTGGCGACTCGTGCGTCGCCTC-
>SNPs
SSS------------S-S---S----------------------------------------------------------
---------------------------S----------S------------------S-------------------S--
------SSSSS--------------------S-------------------------------S----------------
---------------------------------------S------------------------S---------------
----SS-SSS------------------S-----------------------------S---------------S-----
------------S----S-S------------------------S--------------S--------------S-SSSS
SSSSSSSSSSSSSSSSSS-----------------S--S-----S-SS-S-----SSS-S---------S--S--S----
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
-------------------------------------SSSSS--------------------------------------
-----------------------------------------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S-------------S
---S--------------S-S-SSS-SS-SS-SSSSS-S-SSSSSSSSSS------------------------------
------------------------------------------------------------------------S-------
--SSS---S-----------------------------------------------------------------------
-----------------------------------S-------------------------S--------S---S-----
---------------------------------------------------SS---------------------------
--------------------------------------------------------------------------------
----------S------------S-----------S---------------S---------------S------------
---------------S-------------S--------------------S---------S----------S---SS---
----------S--------------------------SS-S--SS----SS-----------S----S------------
-------------------------------S-S---------S-------S--------S------S----------S-
----------------------------SS---S----------------------------------------------
----------------------------S--S------------------------S-S-SSSSSSSS--S-SSSSS-SS
SSSSSSSSSS---------------------------------------------------------------------S
-S-S-S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
----------------------------------------------------------------S-------S-------
------------S-----------------------------S-------------------SSS-SSSS-SSSSSS---
----------S--------S------------------------------------------------------------
-------------------------------------------S--------------------------S---------
-----------S----------S--S-S-------------------------------------S--------------
------------------------------S---------S---------------------------------------
-------------------------------------------------------------------------SS----S
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S-----------------------------------S----------------
----S-------------------------------------S-------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------S----------S------------------------------
--------------------S-----------S-----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S------------------------S
--------------------------------------------------------------------S-----------
S------------------------S---------------------------------S-------------SS-S---
----------------------------S-S-------S---SSSS--SSSSSSS-------------------------
-------------------------------SSS----------------------------------------------
------S----------------SS----------------------SSSSSSSSSSSSSSSSSSSSSSSSS--------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S---------------S-------------
----------------S--------------------------------S---------------------------S--
-------S-SSSSSSSSSSS---S----------------------------------S---------------------
-----------S--------------------------------------------------------------------
------------------------------------------------------SSS-----------------------
----------------------------------------------SS-------------S---------------S--
--------SS---------------------------S-----------------------------SSS--S-------
----------------------SS----------------SSSSSS-----------------------S----------
-----------------------------------S----S---------------------------------------
-------------------S-----S--SS--------------------------S-----------------------
-------------------------------------------------------------S--S---------------
------------------------S-------------------------------------------------------
---------S-------------------------------------------S--S--------S--------------
---------SSSSSSS-SSS-S----------------------------------------------------------
------------SSSSSSSSS---S-S-----------------------------------------------------
------------S----------------------------SSSSSSS------SS------------------------
---S--------------S--S--------------------------S----S---------------S----------
--------------S--------S------------------SSSSS---------------------------------
-----------SSS---SSS---SSSSSS------S-------------------------------------SSSSS-S
S---------------------S-------SSS---S
>forward_877
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---------------------------------------------------------CCCTCCCCCTACCACTACTT---
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>reverse_2068
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-------------------------------------------------------------------ACCCCGATTTGAC
CACGAAC-------------------------------------------------------------------------
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>forward_1931
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-----------------------------------------------------------------------TGCTAAAGC
TCCGATCTCCC---------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3840
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-------------------------------------------------------------------------------G
TCCTCCTCCTCCTCCTCTG-------------------------------------------------------------
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>forward_3815
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-----------------------------------ACCCGAACGTACAGGTATCG-------------------------
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>reverse_5916
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---------------------------------------------------------------------------ACTCC
CTCCCACCCTCTTTT----------------------
