>input_sequence_22221
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-----------------------------ATGGCGCCGTGGACACCATCGCCCGTCGCCGCCACCGCCGCCGCCGCCTCC
CAGGCCCAATTCGGCTTCTCGGCCGCCCGCCCGGCGCAGGCGCGGCAGGCCGTCGTCCTGCCGCCTCTCGCCCGCAGGTT
CCCCGGCTCCTCCCTCCTCGCCGTCAACGCCCCCGCCCCCTCCCCCTCGTGGAGGCGCCATGCCCTCGCCACCGAGGTCG
AGGGCCTCAACATCGCCGACGACGTCACCCAGGTAACCAA-CACCGTCTATCCACTGCCTCCAGTTCAATCGCTCCATTT
CCACTCTCTGCCCAGTTAGGAGTAGTGGGGTTGGTAGGATTGCTAGTACCTAG------AGCTTACTGATGCCGCAAAGC
CTAAACTAGTAAAGATCTAGTTTGACCCTGCGACATCCTTCGTTCATCATATCTCAAATCATCCTAGTTTCACATGGGCA
AATTCTTTAGCAAGA---AAACAAAACATCATCATCAGTCTCATAATCTAAGCACCCGTCTCAGGATTTTTGTTGTTGTT
GTTGTTGTTGAATTTGATCGCAGCTCATCGGCAAGACGCCCATGGTGTATCTCAACAAGATCGTCAAGGGCTGCGTGGCC
AACGTTGCCGCCAAGCTTGAGATTATGGAGCCCTGTTGCAGTGTCAAGGACAGGTTACATTACAAATTCTTATTGTCCTC
CTCATTTCAATGTTGAGGTCGTTTTCTTCCCATGATGGACCGACCAACTAAGCAGCTCCCAACCGATTTATGCTTCAGGA
TAGGTATCAGTATGATTTCCGACGCTGAAGAGAAGGGTTTGATAACACCAGGAAAGGTGAGGCATCTTCTGTTTGTGTGC
ATATGCACTCGCTGGCTTCTTTATCATGTTCTATCCCATTCCTAACAATTATCAACAAGGGA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AGGGTATTGGTTAACAAT
ATGTGCATATATTAACTTATGTTCTCTGCCCTCAGAGTGTTTTGGTGGAAGCAACAAGTGGAAATACAGGAATTGGTCTT
GCTTTCATTGCTGCTTCCAGGGGATATAAGTTGATACTGACAATGCCCACATCAATGAGCATGGAGAGGAGAGTTCTACT
CAAGGCTTTTGGCGCTGAACTTGTGCTCACGGATGCCGCAAAAGGGATGAAAGGGGCCCTAGATAAAGCTACAGAGATAT
TAAATAAGACACCCAATTCATACATGCTTGAGCAGTTTGACAACCCTGCCAACCCAAAGGTAACAAGGAGAAGTAACTAT
GTGTCTCTACTCTACGTAAGTGTGCGCTATTACTTCTAACCTACTTGAGGCTGATGTTTATCTTTACTGATTTTCAATCA
GGTACATTATGAGACTACTGGGCCAGAAATCTGGGAGGATTCAAAAGGGAAGGTAGATATATTCATTGGTGGAATTGGAA
CAGGCGGAACAATATCTGGTGCTGGTCGTTTCCTGAAGGAGAAAAATCCCGATGTCAAGGTTTCTTCAAATTCCACCCAA
ATAAAATGTACTCTGTTATATTCT--AAAAAAACTACTCTATAGTGCTCATACTGTTATCCTTTTCTAGGTTATTGGTGT
TGAACCTACTGAAAGTAACATACTCTCTGGTGGTAAACCTGGTATGTTTGCTATCAGAGAAA-GACTTCCATTGAGTTTT
CCTTAAAAAA-AAGACATACTTCCTTTGAGCTTGTCAAACTTATGTTCTTTGCCTTAAAACTCTTATCCGCTTGTGTAGG
CCCACATAAGATTCAAGGCATTGGAGCAGGATTTGTTCCTAGGAATTTGGACAGTGATGTTCTCAATGAAGTAATTGAGG
TCAGAGTTTTTTCTATCCGTCAGTATATTTCACCTTTTTTAGAATAAAAGCAAGACATGAAGGTTGTAGTTTCTTTCTTG
AATTCAGCTGAACTGTGCCATTTATTCCATTTCACTGTATTTTCTTAACGTCTCAGCATAGGCTGATAGGTCTATTATGC
ATTTATGCTAGTTCTACGTAGTTATACAAGTAC-AATTGCATATGCTAGTTCTATTGTGGTTACGTCTTCAGTCATGTGG
ATGTCGTCCTTGCATGAGTGGATCATCCCTCCTTTTCCTCTGCTTGGTATAATGCAAATGTTAGGGTTGTGTGGTACTAC
TTTCTTAGGACTATTACTGCAGGGTTTTCTTTTCTTATAGTTATATCTAAC--CACGTTCTGCTTATGTTCTAGATATCA
AGCGATGAGGCTGTTGAGACAGCAAAGCAGTTGGCTCTTCAGGAAGGATTGCTGGTATTGTAATTTCACATGTTGATGCA
TTTTTTGTGTGTTCCATACATTTATGCGGCGTTCTTTTTGAGATATCGTCCTTTAGTTGCAAACGTTTATATGCTTAAAA
AAAAGCAGGGGAATCATGACTCACATCATGCTAGTCTGTTTTTTTCCCTTGGCTTGCTATTTAAGTGTAAGCACCTGGCG
GTCTTCTCTGTAGATCTAGACTAGAAATAGTGTGTTTTTGATAGGCAGCGTGTTTGAGCCAGTTTATCTGTTCATTTCTC
CCATCATAGTGTTGTTAAATGTATGATGCATCCCAGTACAAATTTTCTATGGTGCATCATAGTGCCAGTTAGAGTTGTGG
AGACAGACTTTGGAATCGAAAGGTTTTAGGCTCAGTAGAACTAAAACTGAGTACATGAGGTGCGGTTTCAGTACTACTAG
GCACGAGGAGGAGTTAGCCTT-----GGTGGGCAGGTGGTACCTCAGAAGGACAGTTGTTG-----------TTGTTGCA
TCGTATCCACATAATCTCATGTGGGACCAGGGTGTAGGAGACCACCACATAATCTCATTGTTGCG-AAAATCATGAACCA
TTTGTTCATATATGTATGGCTGTTCTGTTCCTCATATGCAGTGGTTAATTAGTA-----GGAAG------CCTGCATTTT
TTGTTTCTCATGTCAGTCAGTCGTCTATGAATCAGAGATCAGAAATCCTGAACCTATATATGAATGTATGTTGTGCAGGT
CGGGATCTCGTCTGGGGCAGCCGCGGCCGCTGCCATAAAGGTCGCCCAGAGACCCGAGAACGCGGGGAAGCTGATAGTGG
TAAATACCGCTAATCTTACAACAACGTGTCATATCTCTAGCTCATAGAACTCTTGTCTTGAAAACATCCACGGACGATCG
ACACCGACATTGTTGTCTGTTTTGTGTGCGTGACAAACAGGTGGTGTTCCCGAGCTTCGGCGAGAGGTACCTGTCGTCGG
TGCTGTTCCAGTCCATCAGAGAAGAGTGCGAGAAGATGGAGGCCGAGGCGTGA---------------------------
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---
>chr3D_1_TraesCS3D01G087300
AGCTCTCTAAATCAAACCAAAAGTTCAT-AAAATCATATAAATTAAAACCCTAACCATTTTCAAAAAGTGA---TTTTTA
TGTTTCAAGAAATTTATAAAATTTTAAAACTTTAGCAAACTTGATGAAATGTAACCCATAGTTCATTCT-----------
------------CACATATGACCATTTATACCACGTTTAAAAAGCAACAACAAAGTTCTCTTATCTTTTGCGTTATTTAT
GGAGCACACGTGACTGCACCAACAATCTCGACACACGTAAACTA----TTTCATTGTTTGAAATAAAGGAACAAAAAAC-
--CCAGTCATATAGGGAAACTACAACTTCAAAATTTTGAAAATAAATAGA-AAAAACACAAACACATGGATCCTATTAAT
TGAGAACCATACACATTCCTCAAGAAAATATTACAATTTATTTTTGGTATAAGAACAAGGAGAATTGATCTCCAAA----
------ATCTTTGGTACAAGAATATTTACCAATTTTCCATTGTTGCACATGAAACGAATACCCCGTACTCTTTTGATGAA
ATTTTGCATATTATAAACTCCAAAAATATCCTAAATCTCCAAATGCCCGCGCATATCTTTAGAACTTGC-AAAAAAGAGA
GGCAAAACCGCCATTCAAAACCAGGCTATGTCTC-AATATAAACGGTTTTATGAATTCTAGTAGCGTTGAATATGAATGC
CCACACTTCAAA--------------------------------------------------------------CCAGAG
CAGGGCCGTGTCTCAGTCCCAGCGTGGCTGATCATCCCCGGACCATACT-TTTTTGTGCTTAAAATGTAAGACAAAAAAA
GTGTGTGTTTTTGGAG--TTAGTGGAGAAGAGATATCTGGTGTGTGATGGCCGATGAACGAATGTACTAACACCATTTCC
AGGTCCGAATACATCCATCCAACCCTCCATCGCAACGAAAAGAGGCCCATATTCGATCCATCCATCCA------------
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---------------------TCCATCCCCTGGGAATCCCAGAGGGCAGACGGCACCAT----CACACCCAGCGAAGCAA
GAATCCGAGGGGAAAGGAAGGAAGGGAGAATGGCGCCGTGGACACCATCGCCCGTCGCCGCCACCGCCGCCGCCGCCTCC
CAGGCCCAATTCGGCTTCTCGGCCGCCCGCCCGGCGCAGGCGCGGCAGGCCGTCGTCCTGCCGCCTCTCGCCCGCAGGTT
CCCCGGCTCCTCCCTCCTCGCCGTCAACGCCCCCGCCCCCTCCCCCTCGTGGAGGCGCCATGCCCTCGCCACCGAGGTCG
AGGGCCTCAACATCGCCGACGACGTCACCCAGGTAACCAA-CACCGTCTATCCACTGCCTCCAGTTCAATCGCTCCATTT
CCACTCTCTGCCCAGTTAGGAGTAGTGGGGTTGGTAGGATTGCTAGTACCTAG------AGCTTACTGATGCCGCAAAGC
CTAAACTAGTAAAGATCTAGTTTGACCCTGCGACATCCTTCGTTCATCATATCTCAAATCATCCTAGTTTCACATGGGCA
AATTCTTTAGCAAGA---AAACAAAACATCATCATCAGTCTCATAATCTAAGCACCCGTCTCAGGATTTTTGTTGTTGTT
GTTGTTGTTGAATTTGATCGCAGCTCATCGGCAAGACGCCCATGGTGTATCTCAACAAGATCGTCAAGGGCTGCGTGGCC
AACGTTGCCGCCAAGCTTGAGATTATGGAGCCCTGTTGCAGTGTCAAGGACAGGTTACATTACAAATTCTTATTGTCCTC
CTCATTTCAATGTTGAGGTCGTTTTCTTCCCATGATGGACCGACCAACTAAGCAGCTCCCAACCGATTTATGCTTCAGGA
TAGGTATCAGTATGATTTCCGACGCTGAAGAGAAGGGTTTGATAACACCAGGAAAGGTGAGGCATCTTCTGTTTGTGTGC
ATATGCACTCGCTGGCTTCTTTATCATGTTCTATCCCATTCCTAACAATTATCAACAAGGGA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AGGGTATTGGTTAACAAT
ATGTGCATATATTAACTTATGTTCTCTGCCCTCAGAGTGTTTTGGTGGAAGCAACAAGTGGAAATACAGGAATTGGTCTT
GCTTTCATTGCTGCTTCCAGGGGATATAAGTTGATACTGACAATGCCCACATCAATGAGCATGGAGAGGAGAGTTCTACT
CAAGGCTTTTGGCGCTGAACTTGTGCTCACGGATGCCGCAAAAGGGATGAAAGGGGCCCTAGATAAAGCTACAGAGATAT
TAAATAAGACACCCAATTCATACATGCTTGAGCAGTTTGACAACCCTGCCAACCCAAAGGTAACAAGGAGAAGTAACTAT
GTGTCTCTACTCTACGTAAGTGTGCGCTATTACTTCTAACCTACTTGAGGCTGATGTTTATCTTTACTGATTTTCAATCA
GGTACATTATGAGACTACTGGGCCAGAAATCTGGGAGGATTCAAAAGGGAAGGTAGATATATTCATTGGTGGAATTGGAA
CAGGCGGAACAATATCTGGTGCTGGTCGTTTCCTGAAGGAGAAAAATCCCGATGTCAAGGTTTCTTCAAATTCCACCCAA
ATAAAATGTACTCTGTTATATTCT--AAAAAAACTACTCTATAGTGCTCATACTGTTATCCTTTTCTAGGTTATTGGTGT
TGAACCTACTGAAAGTAACATACTCTCTGGTGGTAAACCTGGTATGTTTGCTATCAGAGAAA-GACTTCCATTGAGTTTT
CCTTAAAAAA-AAGACATACTTCCTTTGAGCTTGTCAAACTTATGTTCTTTGCCTTAAAACTCTTATCCGCTTGTGTAGG
CCCACATAAGATTCAAGGCATTGGAGCAGGATTTGTTCCTAGGAATTTGGACAGTGATGTTCTCAATGAAGTAATTGAGG
TCAGAGTTTTTTCTATCCGTCAGTATATTTCACCTTTTTTAGAATAAAAGCAAGACATGAAGGTTGTAGTTTCTTTCTTG
AATTCAGCTGAACTGTGCCATTTATTCCATTTCACTGTATTTTCTTAACGTCTCAGCATAGGCTGATAGGTCTATTATGC
ATTTATGCTAGTTCTACGTAGTTATACAAGTAC-AATTGCATATGCTAGTTCTATTGTGGTTACGTCTTCAGTCATGTGG
ATGTCGTCCTTGCATGAGTGGATCATCCCTCCTTTTCCTCTGCTTGGTATAATGCAAATGTTAGGGTTGTGTGGTACTAC
TTTCTTAGGACTATTACTGCAGGGTTTTCTTTTCTTATAGTTATATCTAAC--CACGTTCTGCTTATGTTCTAGATATCA
AGCGATGAGGCTGTTGAGACAGCAAAGCAGTTGGCTCTTCAGGAAGGATTGCTGGTATTGTAATTTCACATGTTGATGCA
TTTTTTGTGTGTTCCATACATTTATGCGGCGTTCTTTTTGAGATATCGTCCTTTAGTTGCAAACGTTTATATGCTTAAAA
AAAAGCAGGGGAATCATGACTCACATCATGCTAGTCTGTTTTTTTCCCTTGGCTTGCTATTTAAGTGTAAGCACCTGGCG
GTCTTCTCTGTAGATCTAGACTAGAAATAGTGTGTTTTTGATAGGCAGCGTGTTTGAGCCAGTTTATCTGTTCATTTCTC
CCATCATAGTGTTGTTAAATGTATGATGCATCCCAGTACAAATTTTCTATGGTGCATCATAGTGCCAGTTAGAGTTGTGG
AGACAGACTTTGGAATCGAAAGGTTTTAGGCTCAGTAGAACTAAAACTGAGTACATGAGGTGCGGTTTCAGTACTACTAG
GCACGAGGAGGAGTTAGCCTT-----GGTGGGCAGGTGGTACCTCAGAAGGACAGTTGTTG-----------TTGTTGCA
TCGTATCCACATAATCTCATGTGGGACCAGGGTGTAGGAGACCACCACATAATCTCATTGTTGCG-AAAATCATGAACCA
TTTGTTCATATATGTATGGCTGTTCTGTTCCTCATATGCAGTGGTTAATTAGTA-----GGAAG------CCTGCATTTT
TTGTTTCTCATGTCAGTCAGTCGTCTATGAATCAGAGATCAGAAATCCTGAACCTATATATGAATGTATGTTGTGCAGGT
CGGGATCTCGTCTGGGGCAGCCGCGGCCGCTGCCATAAAGGTCGCCCAGAGACCCGAGAACGCGGGGAAGCTGATAGTGG
TAAATACCGCTAATCTTACAACAACGTGTCATATCTCTAGCTCATAGAACTCTTGTCTTGAAAACATCCACGGACGATCG
ACACCGACATTGTTGTCTGTTTTGTGTGCGTGACAAACAGGTGGTGTTCCCGAGCTTCGGCGAGAGGTACCTGTCGTCGG
TGCTGTTCCAGTCCATCAGAGAAGAGTGCGAGAAGATGGAGGCCGAGGCGTGAGGACCATTTCCACGCCTGGCGAAGAAG
CTTTTTCTGCTCCGTCTTCT--TT-GTCAAACCGAATAAGAATAAGGCGGCATACATGGAAACGAACGCTTGACCTACGC
CCGTCGCTCACATTTTGTTGGTATTGATTGACAGTG--ATGATGATACGCATGGTTGTAAGGAAACAATTACGTCACTTT
TTTGGATGAGCAA----CGCTCACTCACTCGCTCAAAGCAGAAATCAGGCAGCCTGTATACACTGAAATTTGAAA-TGCT
TGTGTTTGGTGTTTTTTCTGAGCTGGGGTTATCTCGAGGTTTGATGGTGTTTGTAATTTCATTGTTTTGTTGGTAGA-TC
GATGAC------ATAATAATAAGGAAATA-ATAGCATAAC------TTTTTTTCAATTTACAGTGTAATATGTAATAAAT
AAAATAAAATACTACTACCTCTGTTCGTTTTTATAAGACGTTTTAGACATTCAAACACTGTTCAAAACAGTACAAAGCAA
GCTGTCTGAAACGTCTTATAAAGACAAACGGAGGGAGTAATAATTAATAAAATAAAT---TAGTAATAAGAAAATTTTAT
ATAAAAAATAAGTGAAATGAACTAGCACTATTATGAGAGAGCAA-------------TTTTGTTCTTGGTGGT----ACT
CGTTTTCTTGGGTCGTTGGCACGTAGAGAAGGTAGGAAAGCGAAGAAGCAAGTGAGAAGAAGAGGAGACGAGACGAATGA
TGAGCAGTTGCAGTTAGGTTGGTTCGTTGCTTCCACCCCCCCTCC--CCCCTCTCCCACCCACGACTCCTCGAGCCAAGC
GAAGCAAACACGGCG---CCCAGACCGACGGACGGAGACCAAGCC---------AGCAAGCCATAGGCGGCGGATCCCCG
ACCCGCCGACGGGACACAGAG--AACCCTACCCACTCCCTCCAGGACCAAGAGCTCGCCGCCAGAGCAGCAGGGGGGGAG
AGGAGCCGCCGGCTCGACTC----CGCTCGGGCAGCCAGCA------AGGCCCCTCGCGCGATTCGGATCCCCGCCCCGC
CGA
>chr3A_3
--CTCTCTAAATCAAACCACAAACTTCAGAAAATCATATAAATTAAAACCCTAACCAATTTCAAAAATAG--TTTTTTTA
TGTTTCAAGAAAATTA--------TAAAACTTTAGCAAACTTGATGAAATGTAACCCATAGTTCATTCCCACATATGACC
GTTGTTCATTCCCACATATGACCGTTTATACCACGTTTAAAAAGCAACAACAGAGCTCTCTTATCTTTTGCGTTATTTAT
GGAGCACACGTCACTGCACCAACAATCTCGACACATGTGAATTG----TTTCATTTTTTGAAATATAGGAGCAAAAAATA
AACCAGTCACAGAGGGTAACTACAAC---------TTGAAAATAAATAGA-GAAAACACAAACACATGTAGTTAATTAAT
TAAGAAACATACAAATTCATAAAGAAAT-ATTGCAATCTATC-TTTGTATAAGAACAAGGAGAATTTATCTTCAAACCCT
AAATTTATCTTGGGTACAAGAATATCTATC-ATTTTCCATTGTTGCACGTGAAACAAATACCC-GTACTATTGTGCTGAA
ATTTTGCATGCCATAATTTCCAAACATGTCCTAAATCTACAAATGCCCGCGCGTATTTGTAGAACTTGC-AAAAAGGAGA
GGCAAAACCGCTATTCAAAACCAGGCTAGGTCTC-AATATAAACGGTTTTACAAATTTCAGTAGCGTCGAATATGAATGC
CCACGCTTCAAA--------------------------------------------------------------CCGGAG
CAGGGCCGGGTCTCAGTCCCAGTGTGGCGGATCATCCTCGGACCATACC-TTTTTGTGTTTAAAATGTAAGACAAAAAAA
AGTGTATGTTTTGGAA--TTAGCAGAGAAGAGATATCTGGTGTGTGATGGCCGATGAACGAATGCACTAACACCATCTCC
AGGTCCGAATCCATCCAT----CCATCCATCCAAGAGTGAAGTGCATCTTAGGTCCTCGAACTACTTCGATGGTGTCACG
TAGGTCCTCAAACTATGAAAAGTGTCATCTAGGTCCTAAAAATTCCTTGAAGTGTAATAAGTGTGTGTATATGTGACAGC
TCTGAAATAGTTCAAGGACCTACTTAACACCTTTGAAATAGTTTGAGGACCATGATAGCACACCTATTGCACTTTGAGGA
CCCGGATGATGATTTTCATAGTTCGAGGACCTACGTGATACTGCTGAAATGGTTCGAGGACCTATGGTGCACTTCACTCT
CCATCCAACCCTCCATCCA-TTCCATCCCCTCGGACTCCCAGAAGGCAGACGGCACCATCAGACACACCCAGCGAAGCAA
GAATCCGAGGGGAAAGGCAGCAAGGGAGAATGGCGCCGTGGACACCATCGCCCGTCGCCGC---------CGCCGCCTCC
CAGGCCCAATTCGGCTTCTCGGCCGCCCGGCCGGCGCAGGCGCGGCAGGCCGTCGCCCTGCCGCCTCTCGCCCGCAGGTT
CCCCGGCTCCTCCCTCCTCGCCGTCAACGCCCCCGCCCCCGCCCCCTCGTGGAGGCGCCATGCCCTCGCGACCGAGGTCG
AGGGCCTCAACATCGCCGACGACGTCACGCAGGTAACCGACCACCGTCTGTCCACTGCCTCCAGTTCAATCACTCCATTT
CCAGTGTGTGCCCAGTCAGGAGTAGCGGGGTTGGTAGGATTGCTGCTACCTAGAGCTTTAGCTTACTGATGCCACAAAGC
CTGAACTAGTAAAGATCTAGTTTGACCCTGCGACATCCTTCGTTCATCATATCTC-AATCATCCTAGTTTCACACGGACG
AATTCTTTAGCAACA---AGACAAAACATCATCCG---TCGG--AATTTAAGCACCCGTCTCAGGATTTTTTTTGT----
-TTGTTGTTGAATTTGGTGGCAGCTCATCGGCAAGACGCCCATGGTGTATCTCAACAAGATCGTCAAGGGCTGCGTCGCC
AACGTCGCCGCCAAGCTCGAGATTATGGAGCCCTGCTGCAGTGTCAAGGACAGGTTACATTAG-AATTCTTATTGTCCTC
CTCAGTTCAGTGTTGAGGTCGTTTTCTTCCCCTGATGGACCGACCAGCTAAGCAGCTCCCAACCGATTTATGCTTCAGGA
TAGGTATCAGTATGATATCCGACGCTGAGGAGAAGGGTTTGATAACACCCGGAAAGGTGAGGCATCTTCTGTTTGTGTGC
ATATGCACTCGCGGGCTCCTTTATCATGGTTTA-CCCCTTTCTAACAGTTATCAACAAGGAA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AGGGTATTCAGTAACAAG
CATATA------TAACTAATGTTCTCTGCTCTCAGAGTGTTTTGGTGGAAGCAACAAGTGGAAACACAGGCATTGGTCTT
GCGTTCATTGCTGCTTCCAGGGGATATAAGTTGATACTGACAATGCCCACATCTATGAGCATGGAGAGGAGAGTTCTACT
CAAGGCTTTTGGCGCTGAACTTGTGCTCACAGATGCTGCAAAAGGGATGAAAGGGGCCCTAGATAAAGCTACAGAGATCT
TGAATAAGACACCCAATTCATATATGCTTGAGCAGTTTGACAACCCTGCCAACCCAAAGGTAACAAAGAGAAGTAGCCAT
GTGTTTCTACTCTATGTGAGTGTGCGCTATTACTTCTAACCTACTTGAGGCTGATGTTTATCTTTATTGATTTTCAATCA
GGTACATTATGAGACTACTGGGCCAGAAATCTGGGAGGATTCAAAAGGGAAGGTAGATATATTCATTGGTGGAATCGGAA
CGGGCGGAACAATATCTGGTGCTGGTCGTTTCCTGAAGGAGAAAAATCCCGACGTCAAGGTTTCCTCAAATTCCACCCAA
ATAAAATGTTCCCTGTTATATTCTCAAAAAAAAGTACTCTATAGTGCTCATACTGTTATCTTTTTCTAGGTTATTGGTGT
TGAACCTACTGAAAGTAACATCCTCTCTGGTGGTAAACCTGGTATGTTTGCTATCAGA-AAAAGACTTCCTTTCAGTTTT
CCTTTAAAAAAAAGACATACTTCCTTTGAGCTTGTCAAACTTATGTTCTTTGCCTTATAACTGTTATCCGCTTGTGTAGG
CCCACATAAGATTCAAGGCATTGGAGCAGGATTTGTTCCTAGGAATTTGGACAGTGATGTTCTCAATGAAGTAATTGAGG
TCAGAGTTTTTCCTATCCGTCAGTATGTTTCACCTTTTTTAGAATAAAAGAAAGACATGAAGGTTGTAATTTCTTTCTTG
AATTCAGCTGAACTGTGCCAGTTATTCCATTTCACTGTATTTTCTTAACGTCTCACCATAGGCTGATAGTTCTG------
--TTATGCTAGTTCTACGTAGTTATACAAGTAC-A-TTCCATATGCTAGTTCTATTGTGGTTACGTCTTCAGTCATGTGG
ATGTTGTCCTTGCATGAGTGGATCATCCCTCCTTTTGCTCTGCTTGGTACAATGCAAATGTTAGGGTTGTGTGGTACTAC
TTTCTTAGGACTATTACTGCAGGGATTTCTTTTCTTATAGTTATATCTAACCACACGTTCTGCTTATGTTCTAGATATCA
AGCGATGAGGCTGTTGAGACAGCAAAGAAGTTGGCTCTTCAGGAAGGATTGCTGGTATTGTAATTTCACATGTTGATGCA
ATTTTTCTGTGTTCCATACATTGATCCGGCGTTCTTTTTGAGATATCGTCCTCTAGTTGCAAACGTTCATATGCTTAAAA
AA--GCAGGCGAATCATGACTCGCATCATGCTACTCTGTTTTTT-CCCTT-GCTTGCTATTTAAGTGTAAGCACCTGGCG
GTCTTCTCTGTAGATCTAGACTAGAAATAGTGGGTTTCTGGTAGGCAACATGTTTGAGCCAGTTTATCTGTTCATTTCTC
CCATCATAGCGTTGCTAAATGTACGATGCATCCCAGTACAAATTTTCTATGGTGCATCATAGTGCCAGTTAGAGTTGTGG
AGACAGACTTTGTAATCAAAAGGTTTTAGGCTCAGTAGAACTAAAACTGAGTACATGAGGTACAGTTTCAGTACTACTGT
GCATGAGGAGGAGGAGGAGGTTAGCCGGTGGGCAGGTGGTACCTCAGAAGGACAGTTGTTGATGTTGTTTTCTTGTTGCA
TCGCATCCACATAATCTCATGTGGGGCCAGGGTGTAGGAGACCACCACATAATCTCATTGTTGCG-AAAATCATGAACCA
TCTGTTCATATATGTTTGGCTGTTCTGTTTCTCATATGCAGTGGTTAATAAGTACGAGTAGTAGTAGGATCCTGCATTTT
TTGTTTCTCCCACCCGTCAGTCGTCTATGAATCAGAGATCAGCAAACCTGAACCTATATACGAATGTATGTTGTGCAGGT
CGGGATCTCATCTGGGGCAGCCGCGGCCGCTGCCATTAAGGTTGCCCAGAGACCAGAGAACGCAGGGAAGCTGATAGTGG
TAAATACCGCTAATCTTACAACAACACATAA---TTCTAGCTCATAGAATTCTTCTCTTGAAAACATCCAATGGCGATCG
ACGCTGACATTGTTGTTTGCTTTGTGTGCGCAACAAACAGGTGGTGTTCCCGAGCTTCGGCGAGAGGTACCTGTCATCAG
TCCTGTTCCAGTCCATCAGAGAAGAGTGCGAGAAGATGGAGGCCGAAGCGTGAGGACCATTTCCACGCTTGGCGAAGAAG
CT-TTTCTGCTCCGTCTTCCTCTCCGTCGAACCGAATAAGAATAAGGCGGCATGGAAACGAACGAACGGTTGACCTACGC
CCGTCGCTCACATTTTGTTGGTATTGATTGATA-TG--ATGATGACACGCATGGTTGTTAGGAAACAATTACATCTCTTT
TTTGGATGAGCAA----CGCTCACTCACTCGCTCAAAGCAGAAATCAGGCAGCCTGTGTACATTGAAATTTGAAAATGTT
TGTGTTTGGTGTTTTTTCTGAGCTGGGGTTATCTCGAGGTTCGATGCTGTTTGTAATTTAATTGTTTTGTTTGTAGGCTC
GGTGAC------ATAATAGTAAGGAAAAATAATAATATCAGTGTTTTTTTTCTCAATTTGCAGTGTAATACGTAATAAAT
AAAACGAATTAC--------------------------------------------------------------------
-------------------------------------TAATAATAAATAAAGTAAAGTAATACTAATAGGAAAATAAA--
--AAATAATAAGTG---------------------ATGGAGAAATTCAGTTTCCATTTTTTGTTCTTGGTGGC----ACT
CATTTTCTTGGGTCGTTGGCACGTAGACAAGGTAGGAAAGCGAGGAAGCGAGTG---AGAAGAGGAGAGGAGACGAATGA
TGAGCAGTTGCAGTTAGGTTGGTTCGTTGCTTCCACCCCCCTCCCCTCCCCTCTCCCACCCACGACTCCTCGAGCCAAGC
AACCGCGGCGCCGAGAGCCCCAGACCGACGGACGGAGACCAAGCCGGAAAAGAAAGCCAGCCACAGGCGGCGGATCCCTG
ACTCGCCGACGAGACCCAGAGAGAACCCTACCTACTCCATCCA-------------------------------------
--------------------------------------------------------------------------------
---
>chr3B_3
--CTCTCTAAATCAAACCAAAACTTTGT-AAAATCATATAAATTAAAACCCTAACCATTTTCAAAAGGTGATTTTTTTTA
TGTTTCAAGAAATTAT--AAAATTTAAAACTTTAGCAAACTTGATGAAATGTAGCCCACAGTTC----------------
-------ATTCCCACATGTGACCATTTATACCACGTTTAAAAAGCAATAACAGAGTTCTCTTATCTTTTGTGTTATTTAT
GGAGCACACGTGACTGCACCAACAATCTCGACACATGTGAACTAGCCTTTTCATTGTTTGAAACAAAGGAACAAAAATC-
--CCAGTCATATAGGGAAACTGCAATTTCAAAAATTTGAAAATAAATAGAGAAAAGCACAAACACATGGATTCTATTAAT
TGAGAATCATACGCATTCATCAAGAAAACATTGCAATTTATCTTCGGTATAAGAACAGGGAGAATTGATCTCAAACCCTA
AACTTAATTTTCGGTACAAGAATATTTATC-ATTTTCCACCGTTGCGCATGAAACAAATACTC-ATACTCTTGTGATGAA
AATTTGCATGTTATAAACTCCAAACATGTCCTAAATCCACAAATGCCGGCACATATTTTTAGAACCTGCAAAAAAAGAGA
GGCAAAACCACTATTCAAAACCTGGCCAGGTTTAAAAAATAAACGGTTTTTGTAAACTC--TAGCATCGAATATGAATGC
CCACACTTCAAATTCTCTGTACTACCTTGCCGGTTGATGAATAGATTGAAAGTTTTTCTCGCCAAAAAAAAAACCCGGAG
CAGGGTCGTGTCTCGGTCCCACTGTGGCTGATCATCCTCGGACCATACTTTTTTTGTGCTTAAAATGTAAGACAAAAAAA
GTGTGTGTTTTGGAATTATTAGTGGAGAAGAGATATCTGGTGTGTGATGGCCGATGAACGAATGTACTAACACCATCTCC
AGGTCCGAATACATCCAT----CCCTCCATCGCAACGAAAAGAGGCCCATATTCGATCCAA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-CATCCATCCATCCATCCATTTCCATCCCCTCCGAGACCCAGAAGGCAGACGGCGCCAT----CACACCCAGCGAAGCAA
GAATCCGAGGGGAAAGGAAGGAAGGAAGGATGGCGCCGTGGACACCATCGCCCGTCGCCGCCACCGCCGCCGCCGCCTCC
CAGGCCCAGCTCGGCTTCTCGGCCGCCCGCCCGGCGCAGGCGCGGCAGGCCGCCGTCCTGCCGCCTCTCGCCCGCAGGTT
CCCCGGCTCCTCCCTCCTCGCCGTCAACGCCCCCGCCCCCTCCCCCTCGTGGAGGCGCCATGCCCTCGCCACCGAGGTCG
AGGGCCTCAACATCGCCGACGACGTCACGCAGGTAACCAACCACCGTCTGTCCACTGCCTCCAGTTCAATCACTCCATTT
CCAGTGTGTGCCCGGTCAGGAGTAGCGGGGTTGGTAGGATTTCTGCTGCCTAG------AGCTTGCTGATGCCACAAAGC
CTGAACTAGTAAATATCTAGTTTGACCCTGCGGCATCCTTCTTTCATCATATCTCAAATCATCCTAGTTTCACACGGACA
AATTCTTCATCAGTAATTAAACAAAACATCATCCA---TCTCAGAGTTTAAGCACCCGTCTCAGGATTTTTTT-GT----
-TTGTTGTTGAATTTGATCGCAGCTCATCGGCAAGACGCCCATGGTGTATCTCAACAAGATTGTCAAGGGCTGTGTCGCC
AACGTCGCCGCCAAGCTTGAGATTATGGAGCCCTGCTGTAGTGTCAAGGACAGGTTACATAACAACTTCTCATCTGCCTC
CTCCTTTCAGTGTT----TCGTTTTCTTCCCCTGATGGACCGACCAGCTAAGCAGCTCCCAACCGATTTATGATTCAGGA
TAGGAATCAGTATGATTTCCGACGCTGAAGAGAAGGGCTTGATAACACCCGGAAAGGTGAGAT-----------------
------ACTTGCTGACTTCTTTTCATGTTCCTTCTCTTTTGTACTCCTTCCTTTTCTAAATATAAGCCCTTTTAGAGATT
TCAATAGAACTACATACGGATGTTTATAGACATATTTTAGAGTGTAGATTCACTCATTTTGCTCCGTATGTAGTCTATAT
TGAAATCTCTAGAAGGTCTTATATTTAGGAACGGAGGGAGTAATAATTTGTATGAAGAGATGAAGTTATTTGATAACAAT
AAATGCATA--TTAATTCCTGTTCTCTG--CTCAGAGTGTTTTGGTGGAAGCAACAAGTGGAAACACAGGAATTGGTCTT
GCTTTCATTGCTGCTTCCAGGGGATATAAGTTGATACTGACAATGCCCACATCAATGAGCATGGAGAGGAGAGTCCTACT
CAAGGCTTTTGGCGCTGAACTTGTGCTCACAGATGCTGCAAAAGGGATGAAAGGGGCCCTAGATAAAGCTACAGAGATCT
TGAATAAGACACCCAATTCATACATGCTTGAGCAGTTTGACAACCCTGCCAACCCAAAGGTAACAAAGAGAAGTAGTCAT
GTGTCTCTACTCTATGTAAGTGTGC-CTATTACTTCTAACCTACTTGAGTCTGATGTTTATCTTTATTGATTTTCAATCA
GGTACATTATGAGACTACTGGGCCAGAAATCTGGGAGGATTCAAAAGGGAAGGTAGATATATTCATTGGTGGAATCGGAA
CGGGCGGAACAATATCTGGTGCTGGTCGTTTCCTGAAGGAGAAAAATCCCGATGTCAAGGTTCCTTCAAATTCCACCCAA
ATAAGATGTACTCTGTTATATTCT--AAAAAAACTACTCTATAGTGCTCATACTGTTATCTTTTTCTAGGTTATTGGTGT
TGAACCTACTGAAAGTAACATACTCTCTGGTGGTAAACCCGGTATGTTTGCTATCAGA-AAA-GACTTCCTTTGAGTTTT
CCTTTAAAAG-AAGACATACTACCTTTGGGCTTGTCAAACTTATGTTCTTTGCCTTACAACTGTTATCCGCTTGTGTAGG
CCCACATAAGATTCAAGGCATTGGAGCAGGATTTGTTCCTAGGAATTTGGACAGTGATGTTCTCAATGAAGTAATTGAGG
TCAGAGTTTTTGCTATCCGTCAGTATATTTCACCTTTTTTAGAATAAAAGCAAGACATGAAGGTTGTAGTTTCTTTCTTG
AATTCAGCTGAACTGTGCCAGTTATTCCATTTCACTGTATTTTCTTAACGTCTCACCATAGGCTGATAGTTCTA------
--TTATGCTAGTTCTACGTAGTTATACAAGCACAA-TTGCATATGCTAGTTCTATTGTGG-TACGTCTTCAGTCATGTGG
ATGTTGTCCTTGCATGAGTAGATCATCCCTCCTTTTGCTCTGCTTGGTACAATGCAAATGATAGGGTTGTGTGGTACTAC
TTTCTTAGGACTATTACTGCAGAGCTTTCTTTTCTTATAGTTATATCTAAC--CACGTTCTGCTTATGTTCTAGATATCA
AGCGATGAGGCCGTTGAAACAGCAAAGCAGTTGGCTCTTCAGGAAGGATTGCTGGTATTGTAATTTCACATGTTGATGCA
ATTTTTGTGTGTTCCATACATTGATGCGGCGTTCTTTTTGAGATATCGTCCTTTAGTTGCAAATGTTTATATGCTTAAAG
AA--GCTGGGGAATCATGACACACATCATGCTAGTCAGTTTTTT-CCCTTGGCTTGCTATGTAAGTGTAAGCACCTGGCG
GTCTTCTCTGTGGATCTAGACTAGAAATAGTGGGTCTTTTCTT-------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------AGTACTACTAT
GCACGAGGAGGAGGA---GGTTAGTCGGTGGGCAGGTGGTACCTCAGAAGGACAGTTG--------------TTGTTGCA
TCATATCCACATAATCTCATGTGGGGCCAGGGCGTAGGAGACCACCACATAATCTCATTGTTGCAAAAAATCATGAACCA
CTTGTTCATAT--GTATGTCTGTTCTGTTCCTCATATGTAGTGGTTAATAAGTATAGTAGGAAG------CTTGCATTTT
TTGTTTCTCATGTCAGTCAGTCGTCTATGAATCAGAGGTCAGCAACCCTGAACCAATATATGAATGTATGTTGTGCAGGT
CGGGATCTCGTCTGGGGCAGCCGCGGCCGCTGCCATAAAGGTCGCCCAGAGACCCGAGAACGCCGGGAAGCTGATAGTGG
TAAACACCGCTGATCTTACAACA---TGTCATATTTCTAGCCCATAGAACTCTTCTCTTGAAAACATCCAATGACGATCG
ACATCGACATTGCTGTTTGTTTTGTGTGCGCGACAAACAGGTGGTGTTCCCGAGCTTCGGCGAGAGGTACCTGTCGTCGG
TGCTGTTCCAGTCCATCAGAGAAGAGTGCGAGAAGATGGAGGCCGAAGCGTGAGGACCATTTCCACGCTTTGCAAAGAAG
CTTTTTCTGCATCTTCCTCT--TCCGTCGAACCGAATAAGAATAAGGCGGCATACATGGAAACGAACGCTTGACCTACAC
CTGCCGCTCACATTTTGTTGGTATTGATTGATTGATATATGATGATACACATGGTTGTAAGGAAACAATTACATCACTTT
TTTGGAGGAGCAACGCTCGCTCACTCACTCACTCAAAGCAGAAATCAGGCACT-TGTATACGTTGAAATTTGAAAATGTT
TGTGTTTGATGTTTTTTCTGAGCTTGGTTTATCTCAAGGTTCGACGGTGTTTGTAGTTTCATTGTCTTGTTGTTGGTAGG
TTCGATGTCGTAATAATAGTAAGGAAAAA-AATAATATAAGCGTTTTTTTGTTCAGTTTGCAGTGTAATTCGTAATAAAT
AAAACGAATTAC--------------------------------------------------------------------
-------------------------------------TAGTAATAAATAAAATGAAT---TACTACTAAGAAAATTTA--
--AAAAAATAAGTGAGATGAACTGGCACTATTATCATGGAGAAACTCAGTTTCCATTTTTTGTTCCTGGTGTACTCGACT
CGTTTTGTTGGGTCGTTGGCACGTAGAGAAGGTAGGAAAGCGAGGAAGCAAGT-------------GAGGAGACGAATGA
TGAGCAGTTGCAGTTAGGTTGGTTCGTTGCTTCCACCCCCT---C--CCCCTCTCCCACCCACGACTCCTCGAACCAAGC
CAAGCAACCGCGGC--GCCCCAGACCGACGGACGGAGACCAAGCCAGCC-----AGCAAGCCATAGGCGGCGGATCCCGG
CCCCGCCGACGAGACGCAGAGAGAACCCCGCCCACCCCCTCCAGGACCAGGAGCTCGCCGCCAGAGCAGCA-GGGGGGAG
AGGAGCCGCCGGCTCGACTCCTGCCGCTCGAGCAGCCAGCAGGCAGCAGGCCCCTCGCGCGATTCGGATCCCCCCGCCG-
---
>chr3B_3
--CTCTCTAAATCAAACCAAAACTTTGT-AAAATCATATAAATTAAAACCCTAACCATTTTCAAAAGGTGATTTTTTTTA
TGTTTCAAGAAATTAT--AAAATTTAAAACTTTAGCAAACTTGATGAAATGTAGCCCATAGTTC----------------
-------ATTCCCACATGTGACCATTTATACCACGTTTAAAAAGCAATAACAGAGTTCTCTTATCTTTTGTGTTATTTAT
GGAGCACACGTGACTGCACCAACAATCTCGACACATGTGAACTAGCCTTTTCATTGTTTGAAACAAAGGAACAAAAATC-
--CCAGTCATATAGGGAAACTGCAATTTCAAAAATTTGAAAATAAATAGAGAAAAGCACAAACACATGGATTCTATTAAT
TGAGAATCATACGCATTCATCAAGAAAACATTGCAATTTATCTTCGGTATAAGAACAGGGAGAATTGATCTCAAACCCTA
AACTTAATTTTCGGTACAAGAATATTTATC-ATTTTCCACCGTTGCGCATGAAACAAATACTC-ATACTCTTGTGATGAA
AATTTGCATGTTATAAACTCCAAACATGTCCTAAATCCACAAATG-----------------------------------
--------------------------------------------------------------------------------
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---
>SNPs
SS--------------------S--SS-----------------------------------------------------
----------------SS---S----------------------------------------------S-----------
----------------------------------------------------S---------------------------
-----------------------------------S--S-----------------------------------------
---------------------------------S-------------------------------------S--------
------S-----------S---------S---S--------S--------------------------------------
-----------S----------------S-S------------------------S-------S--------S-------
---------S--------------S--S----------S-----------------S-----------------------
-----------S----------------S----------------------SS----SS--------S------------
----------------------------------------------------------------------------S---
----------------------S--------------S------------------------------------------
---------------S------------------------------------------------------------S---
------------------SSSS--------------------------------------S-S-SSSS------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S---S-------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S--------------------S---------------------S--------
---S-S-S--------S--------S------------------SS---------------------------S------
--S-----------------------------------------------------------------------S--S--
-------------S-------------------SSSSS-----S---S-----------------------S----SSSS
S---------------------------------------------------------------------------S---
-----S-----------------------------S--------------------------------------------
---------S---------------------S--------------S---------------------------------
-------------------------------------------------S------------------------------
---------------------------------S---S--S------S------------S-------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S-S-------
-SS------SS------S-----------S----------------------------------S---------------
--------------------------------------------------------------------------------
------------------------------S-----S-----------------------------------------S-
-S----------------------------------------------------------------S--------S-S--
--------------S---------------------------------------------------S-------------
---------------------------------------------------------------------------S----
-S------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
----------------------------------------------------------S-----------S---------
----S----------------------------------------------------S----S-----------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------S----------------------------------S-------------S----SSSSSS
SS---------------------------------S--------------------------------------------
----S-------------------------------S------------S------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
S---------------------S---------------------------------------------------------
--SS----------------------------------------S-----------------------------------
--------------------------------S-------S------S-S------------------------------
---------S----S--------S--------------------------------------------------------
------------S----S-------------------------------------------S-S---------------S
-------------SSS-SSS------------------------------------------------------------
-------------------------S------------------------------------------------------
-------------------------------------------------S------------------------------
------------------------------------------S--S----------------------------------
---------------------------------------------------------------S----------------
-------------------------S--------S-------------------S---------------SS--------
----------------S-------------S-------------------------------------------------
----------------------------------------------S---------------------S-----------
-----------------------S----S---------------------------------------------------
-------------------------------S----------------------------------------S-------
--------------------------------------------------------------S---------------S-
-----------------------------------------S----------------------------------S---
-S----------------S--------S---SSSSSSS-S-------------------S----------S---------
----SS--S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S-----------------S--------------SSS
SS-------------S-------S----------S-SS---S------------------------------S-------
-------------------------------------------S----------SSS-----------S-----------
-----------------------------------------SS-------------------------------------
S------S-S--------------------------------------------------------------------S-
-----------S---S---------------------------------S---------------------S--------
------------------------------S------------------------------------------S-S---S
SSS
>forward_1312
--------------------------------------------------------------------------------
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-----------CATCCATCCATCCATCCCCTG------------------------------------------------
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---
>reverse_2677
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------------------------------------CGCAAAAGGGATGAAAGGGG------------------------
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---
>forward_1763
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---------------------------------------------------------------TACTGATGCCGCAAAGC
CTA-----------------------------------------------------------------------------
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---
>reverse_3924
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---AGCAGGGGAATCATGACTCAC--------------------------------------------------------
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---
>forward_1912
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---------------------------------------------------GCACCCGTCTCAGGATTTTTG--------
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---
>reverse_4041
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----------------------------------------ATAGGCAGCGTGTTTGAGCC--------------------
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---
>forward_2671
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------------CGCTGAACTTGTGCTCACG-------------------------------------------------
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---
>reverse_4346
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-------------------------ACCAGGGTGTAGGAGACCAC-----------------------------------
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---
>forward_4255
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---------------------------------------------------------------------------ACTAG
GCACGAGGAGGAGTT-----------------------------------------------------------------
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---
>reverse_5772
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-----------GGACACAGAGAACCCTACCC-------------------------------------------------
--------------------------------------------------------------------------------
---
