>input_sequence_22046
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------------------------------------------------------CGTCGCGTTCCATTTCAAAAACGCCA
CCTTTCGCCCCCTGCATTTCCACCAGAGCCTACATGTCTCCGACCACCGCCGCATCCCCCGCGCCGGCGCCGGCAACCGA
CGCGCTCCCGAAACCTTCGCCAGGGGCGAAGCGCAGCCTGATGGGGTCCCTCATCGACGCCACCGCGCTGCTCCGGGCGG
CCTCCTTCAAGGAGGACTCGTACGTGGCCGCGGCGCTCCCGGCCTCGGACCTCCGCGCGCTCGCCGACCTCAGGGCGCTC
CTCGCCACCCACCCGGACCAAATCTCCATCTGGGGCGTGCCGCTCAACCCGCCTAGCGACGCCCCCGCCGACGAACGCAC
CGACGTGGTGCTCCTCAAGTTCCTCCGCGCCAGGGACTTCCGCGTCCGCGACGCGCACGCCATGCTGCTCCGCTGCGCCG
CCTGGCGGGCCGAGTTCCGCGCCGACGCCGTGCTGGACGAGGACCTCGGGTTCAAGGACCTGGAGGGCATCGTCGCCTAC
ATGCACGGCTGGGACCGCGAGGGCCACCCCGTCTGCTACAACGCCTACGGCGTGTTCAAGGACCGGGACATGTACGACCG
TGTGTTCGGCGACGGCGACCGCCTCAGCCGGTTCCTCCGGTGGCGCGTCCAGATCATGGAGCGCGGCGTGCGCTCGCTCC
AGCTCCGCCCCGGCGGCGTCAACGCCATCATACAGGTCACCGACCTCAAGGACATGCCGAAGCGAGAGCTCCGCGCCGCG
TCCAACCAGATACTCTCCCTCTTCCAGGACAACTACCCCGAGATGGTCGCCCGCAAGGTACCCTTCTTTTCCCTACTGCC
TTAGTTCGTGTGGTTTAAGACTCGCATTTCGTCGAACACCTGCCATTTACCTCACACCGTCGC-----------------
-----CCGAGCAGGTGTTCGTGAACGTGCCGTGGTACTTCTCCGTGCTGTTCTCGATGATCTCGCCCTTCCTCACGGAGC
GCACCAAGAGCAAGTTCGTCATCGCGCGTGAGGGCAACGTCGCGGAGACGCTCTTCAAGTAAGGA----CGCAGCTCCAA
TCGATGAACTAAAGTTTTGCTTTTCCTCGTCGTCGCTCCGTCCCGAGAATGCTGACACGGCGGTTGCTCGTTTCCGTTGA
CAGGTTCATCCGGCCGGAGCTGGTGCCGGTGCAGTACGGCGGGCTGAGCCGCTCAAGCGAGCTGGAGAACGGGCCGCCCA
AGCCGGCGTCCGAGTTCACCATCAAGGGCGGCGAGAAGGTCTTCCTAGAGATCGACGGCATTGAGGTACATCCCGTTATC
CTACACGACAACGCCATGCCCCCTCTCGAAGCTCTCTGCGTCGCACAGGAGTAATTTTACGTCGCCCTACGCATA-----
CTACTAGGGTACAAATCAGCTGAAATAATAACGCACAAAAAAAG-----TCCTTTACAAGTGCACTATCCGTCACCTCCT
CGTGCCTGTCTCCATCCGGGTTCTCGAAATCGTCTTGTGCCTAAACAATTGCGGCCGGTGTGTTCGTTACCGGGCAAGAG
CACAAACGCAAGGCTTTGTTTCTTTGCTTTCGCCGTGTCCCAGGCATTTGGCTCCTAGCGCTTTGGTTCCAGCTCCTCCT
CCTGGTT-------TTTACCTTTTCACCTCAACTGCGATCAAGAGGAGGATAGGCCATGCG---TACCTACCACGGTTGG
AGTAGCAAGCATCTTTCGACGAGATAGGATCCGTGGATGGATGGCAGTGCCGCATGTGGTGCGAGCGAGGCCACCCTTTC
ACCAATTTTGAAAAATCTCCGGCGTGGAACACTGCGAAAAGCCTTCTTGCCATGCCACCAGTGGACACTGCGTCAAGCAC
CACCGCAGTGGCCGATGCCGCTGCCGCTGCGACGCTGCGAGACAGGGCTGACACGGGCATGGCATGGGACGGGGCCGGTT
TCCTGGGTTTCCTTGGGTTCAGACGGCTCGCTGGCTCACGCGCCTGGAAAAGCTGGGTCTAGCTAGCTGTAACGCCGGTC
ACACTGCGCACGCACGTCCACCGCTTCACGAGACAGCTCACTCCCGTGAAGAGTAACGTAAAATAAAATATTAATTAAAG
AAGAGAACGGTGGCA-----TGGCATGTGAGTTTCTCGGCCAGGTTTGAATGGAGTTGGCTCGTTCCGTTTCCGTTTCTT
CTCGGCACCGCAACGCCTCTGCCGCGGCTTGT-------CCTTGTTCTCCTCGTACACGACGCACCAGACGCCGTGCTGA
TGTGAGAGTTTTACGGGATAAAGTAGTGGCGACGACAGCGGCCGTGCGCTCTTTTCCTAGCTTTGCTTTTGTTTACGGCT
CACGCCACGGCCCGGCTCTCCACGCGCTGTCACCACTCGGCAGCTCGTCGCTGCTGGCAGCGGC------GGGCGAC-GT
GGTGAAAGCGAAAAGAGTGCGCGCTCGGTGTTTTGCTCAAGTACAGTAGTACTACTCCA-----------AGTACGCATT
AGCAGGGACTGTCAAAAAAAGATTAGGGTAAATTTGGTGGTAAAGCCTCCGCTAATCTTTGCGGAT---AGTAGTACAAA
GCTTCTACGTTCCCCTAATCGGAGGCGTAAAACGTCGTGGCGGAAAAGGGTGGTTCGTTTTTGTTCGCTAGTGGCTAGGC
TAGTGATGT--CAGTGGTCAATTCTTTTCTTTCTTTTCCGGCAACAGTCGATTCTTCTCTTTAACCGCTGTAAAGAAATG
GACACTGTTTTGGATTGTACGTCCAATGCTCAC----GTGAGCACGTGGTAGGGCCCGTGATAAGAAATTTGCTGCTGCT
TCCTGAAGAACACAGGCGCGAAAAAGATAATTACT---------------------------------------------
-------------------------------------TGTATAGTGGTAAAGTAGTAATTGTACTC-GTACATTTGCATG
GTCATTTGAATACCGATGTGTTTTTGATTTGCAGGCCGGTGCAACAATAACGTGGGACCTGGTCGTCGGCGGCTGGGAGC
TAGAGTACGGGGCGGAGTACGTGCCGGCGGCGGAGGGAGGCTACACGCTGTGCGTCGAGAGGACCAGGAAGGTCCCGGCC
GCCGCCGACGAGCCCGTGCACAACGCCTTCACGGCCAAGGAGCCCGGCAAGATGGTGCTCTCCATCGACAACTCCGGCTC
ACGGAAGCGGAAGGTCGCCGCCTACCGCTACTTCGTGCGCAAGCCGTCGGCGTAGGCTCACCCTGCTGCTCGACTACTGT
GGCCGGCGGCTTGCCGGCCGGCTGGTGCTTTGCTTT-----------GCTCGTCTCGGAGAGGAGATTAATTTAGGTCTA
TTTAATTAGTGC--TATAATATGATATGCATGTATTATGCCATATGTAGAATATATTGTATGAGCCGTG-----------
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>chr1D_1_TraesCS1D01G202700
GTGGACAGTTTAGGGAGCTGCAGTAACTCTATAATTAATGGGATAAAACTCGAGAATGGCGTTTTAGCTCTCGTCCTTAA
TGGAAGCCAATTTTTTGAAAAATTCAAAATTCAAAAATTTTGGTTTAAAAAATTTGAA----TTTTTTTGTACAAGTGAA
CAAGGATGTGAGGCGTATGTATGT-AAAATTTCAAGATGAAACACGTTGAAATACCACTTGTATAAAAAAACAATTTCAT
GATCTGGGAGGATGAATAGTATCATGTGTTAAAAGACTCAAGATTTGTCTTTTGCACAATCCTCATTTCGACATATTTCA
TCTTAAAAAAATTCACGCTTGTGCACTATTTAAAAAAAATCCTCTTAATTTTTTTCACAAATCCATGCCGATTTTTTTAA
AGATTTAAATTAAAAAAATCCGGTTTCTAAAAAATCTGAAAAAAATTGTACAAATAAACAAGGATGCGAGGCGTATGTTT
GTAAAATTTCAGATGAAATGCGACATGTACAAAAAAGACAAATTCATGGTTTCGAAGGATGAATAGTATCATGTGTTAAA
AAGCATCAGATTTGTCTTTTTTTGCACAACCCTCATTTCGACGTATTTCGTCCTAAAAATTTACACACTTGTGCACTATG
TCTTCATCTATCTTTGTATTTTTTTTCAGATTTTTTGAATTGTGAAAATATGAATTTTCATGAATTTTAAAATTTGCATT
TGGAGGCCTTCATGGAGCTCGGTCTCCAAAAGCAATTTCCGGATAAAACTCCCTCTTTACATGTTAAAG-AAACGTCACA
TCGCAATTCTTTTTAACAAAAGACAAATCTAGCCTACGAACTACACATACAACCTCACACTGTCCGGGTCATACTTTGTG
CCGTTTCCCTATT--ATAAAACCCAGCAAGAGAGTCGAGCGAGTGAGCTCA-GAGCAGAGCAGCGGACGCC-----GGCC
ACACCACGCTCACGCCACCATCATAACACCACTCCCACGCTCCACTCCGACTCCCGTCGCGTTCCATTTCAAAAACGCCA
CCTTTCGCCCCCTGCATTTCCACCAGAGCCTACATGTCTCCGACCACCGCCGCATCCCCCGCGCCGGCGCCGGCAACCGA
CGCGCTCCCGAAACCTTCGCCAGGGGCGAAGCGCAGCCTGATGGGGTCCCTCATCGACGCCACCGCGCTGCTCCGGGCGG
CCTCCTTCAAGGAGGACTCGTACGTGGCCGCGGCGCTCCCGGCCTCGGACCTCCGCGCGCTCGCCGACCTCAGGGCGCTC
CTCGCCACCCACCCGGACCAAATCTCCATCTGGGGCGTGCCGCTCAACCCGCCTAGCGACGCCCCCGCCGACGAACGCAC
CGACGTGGTGCTCCTCAAGTTCCTCCGCGCCAGGGACTTCCGCGTCCGCGACGCGCACGCCATGCTGCTCCGCTGCGCCG
CCTGGCGGGCCGAGTTCCGCGCCGACGCCGTGCTGGACGAGGACCTCGGGTTCAAGGACCTGGAGGGCATCGTCGCCTAC
ATGCACGGCTGGGACCGCGAGGGCCACCCCGTCTGCTACAACGCCTACGGCGTGTTCAAGGACCGGGACATGTACGACCG
TGTGTTCGGCGACGGCGACCGCCTCAGCCGGTTCCTCCGGTGGCGCGTCCAGATCATGGAGCGCGGCGTGCGCTCGCTCC
AGCTCCGCCCCGGCGGCGTCAACGCCATCATACAGGTCACCGACCTCAAGGACATGCCGAAGCGAGAGCTCCGCGCCGCG
TCCAACCAGATACTCTCCCTCTTCCAGGACAACTACCCCGAGATGGTCGCCCGCAAGGTACCCTTCTTTTCCCTACTGCC
TTAGTTCGTGTGGTTTAAGACTCGCATTTCGTCGAACACCTGCCATTTACCTCACACCGTCGC-----------------
-----CCGAGCAGGTGTTCGTGAACGTGCCGTGGTACTTCTCCGTGCTGTTCTCGATGATCTCGCCCTTCCTCACGGAGC
GCACCAAGAGCAAGTTCGTCATCGCGCGTGAGGGCAACGTCGCGGAGACGCTCTTCAAGTAAGGA----CGCAGCTCCAA
TCGATGAACTAAAGTTTTGCTTTTCCTCGTCGTCGCTCCGTCCCGAGAATGCTGACACGGCGGTTGCTCGTTTCCGTTGA
CAGGTTCATCCGGCCGGAGCTGGTGCCGGTGCAGTACGGCGGGCTGAGCCGCTCAAGCGAGCTGGAGAACGGGCCGCCCA
AGCCGGCGTCCGAGTTCACCATCAAGGGCGGCGAGAAGGTCTTCCTAGAGATCGACGGCATTGAGGTACATCCCGTTATC
CTACACGACAACGCCATGCCCCCTCTCGAAGCTCTCTGCGTCGCACAGGAGTAATTTTACGTCGCCCTACGCATA-----
CTACTAGGGTACAAATCAGCTGAAATAATAACGCACAAAAAAAG-----TCCTTTACAAGTGCACTATCCGTCACCTCCT
CGTGCCTGTCTCCATCCGGGTTCTCGAAATCGTCTTGTGCCTAAACAATTGCGGCCGGTGTGTTCGTTACCGGGCAAGAG
CACAAACGCAAGGCTTTGTTTCTTTGCTTTCGCCGTGTCCCAGGCATTTGGCTCCTAGCGCTTTGGTTCCAGCTCCTCCT
CCTGGTT-------TTTACCTTTTCACCTCAACTGCGATCAAGAGGAGGATAGGCCATGCG---TACCTACCACGGTTGG
AGTAGCAAGCATCTTTCGACGAGATAGGATCCGTGGATGGATGGCAGTGCCGCATGTGGTGCGAGCGAGGCCACCCTTTC
ACCAATTTTGAAAAATCTCCGGCGTGGAACACTGCGAAAAGCCTTCTTGCCATGCCACCAGTGGACACTGCGTCAAGCAC
CACCGCAGTGGCCGATGCCGCTGCCGCTGCGACGCTGCGAGACAGGGCTGACACGGGCATGGCATGGGACGGGGCCGGTT
TCCTGGGTTTCCTTGGGTTCAGACGGCTCGCTGGCTCACGCGCCTGGAAAAGCTGGGTCTAGCTAGCTGTAACGCCGGTC
ACACTGCGCACGCACGTCCACCGCTTCACGAGACAGCTCACTCCCGTGAAGAGTAACGTAAAATAAAATATTAATTAAAG
AAGAGAACGGTGGCA-----TGGCATGTGAGTTTCTCGGCCAGGTTTGAATGGAGTTGGCTCGTTCCGTTTCCGTTTCTT
CTCGGCACCGCAACGCCTCTGCCGCGGCTTGT-------CCTTGTTCTCCTCGTACACGACGCACCAGACGCCGTGCTGA
TGTGAGAGTTTTACGGGATAAAGTAGTGGCGACGACAGCGGCCGTGCGCTCTTTTCCTAGCTTTGCTTTTGTTTACGGCT
CACGCCACGGCCCGGCTCTCCACGCGCTGTCACCACTCGGCAGCTCGTCGCTGCTGGCAGCGGC------GGGCGAC-GT
GGTGAAAGCGAAAAGAGTGCGCGCTCGGTGTTTTGCTCAAGTACAGTAGTACTACTCCA-----------AGTACGCATT
AGCAGGGACTGTCAAAAAAAGATTAGGGTAAATTTGGTGGTAAAGCCTCCGCTAATCTTTGCGGAT---AGTAGTACAAA
GCTTCTACGTTCCCCTAATCGGAGGCGTAAAACGTCGTGGCGGAAAAGGGTGGTTCGTTTTTGTTCGCTAGTGGCTAGGC
TAGTGATGT--CAGTGGTCAATTCTTTTCTTTCTTTTCCGGCAACAGTCGATTCTTCTCTTTAACCGCTGTAAAGAAATG
GACACTGTTTTGGATTGTACGTCCAATGCTCAC----GTGAGCACGTGGTAGGGCCCGTGATAAGAAATTTGCTGCTGCT
TCCTGAAGAACACAGGCGCGAAAAAGATAATTACT---------------------------------------------
-------------------------------------TGTATAGTGGTAAAGTAGTAATTGTACTC-GTACATTTGCATG
GTCATTTGAATACCGATGTGTTTTTGATTTGCAGGCCGGTGCAACAATAACGTGGGACCTGGTCGTCGGCGGCTGGGAGC
TAGAGTACGGGGCGGAGTACGTGCCGGCGGCGGAGGGAGGCTACACGCTGTGCGTCGAGAGGACCAGGAAGGTCCCGGCC
GCCGCCGACGAGCCCGTGCACAACGCCTTCACGGCCAAGGAGCCCGGCAAGATGGTGCTCTCCATCGACAACTCCGGCTC
ACGGAAGCGGAAGGTCGCCGCCTACCGCTACTTCGTGCGCAAGCCGTCGGCGTAGGCTCACCCTGCTGCTCGACTACTGT
GGCCGGCGGCTTGCCGGCCGGCTGGTGCTTTGCTTT-----------GCTCGTCTCGGAGAGGAGATTAATTTAGGTCTA
TTTAATTAGTGC--TATAATATGATATGCATGTATTATGCCATATGTAGAATATATTGTATGAGCCGTGGGATCCTACTT
GTCATCATCGTTATATAAGCTAATGAGTTAAGTTTTTTTGGGGGAAGTTTACCCTTGTCTGTTC----GTATTTACAGAT
TGCCAATGCTTTGGATTCCTAAATTTTATACGTTTTCTTCTGAGTAGGA---TTTCAAGTTGGATTTTTTCCTT-AACCA
CCTTCTAGGCCCTGTTTGGGTGTCACGCGGGCAAACCACAGAAATTCTAGAGACAGAAATGAAAACAGGAGGTAGGACCA
CAATTCCTTTGTTCCAAATGGCACCCAAAATATCAGACACTCCACGGACATCATATGTTGC-------CCGTACTTTGAT
TTGC------------------------------CATAGGGATTAGCCGATTAGGCCTCCTCGATCGCAGGGTTTCCACA
ATGCAC-------GAACATGAAAAATATAGGATGACTTGGGTTTAGTCACTTGGTGGTCTTTTTCCGCTTTCTTTTTAGG
ATTTCTCTTGGGCGTGTT-GTGATGTTGCTTCAGCAAACTATTTTATTTTCTTTTTTGTGGGAAAACTATTTTATTTTCG
GTGCAACACTTGACTTGGTTACCCGTAAAACAAAAGACTTGGTTGTTCGGACATGTTGATTGCTTTATATATATAAAACG
AGAGGCGAAAGCTTGTTTCAGGACATAAATACATTATGCTACTATTGTGTTCTTTTGAATTCTATA----GGATTATGTG
CGCGCTAAAGTTTGTTTTACACCATGAAAAAACAAAAGGATTGTTACTAAGAGATTTGAGTGAATGGAATTTTCTTCTGA
AACATAATGCAAAAGAATGCTAAGAAAATTTATATAT--GATTCAGTCCTACAAGTCAAACAACTTACATACGATTATTC
CTTTCTAAAGATTCTATGGCTCCAACATTTATATGAAAAT----------------------------CCTTTGACTTGG
TAAATTCCATTGATTTTACAGATTCGGGATAACCAAGATGCATTTAGGAGTGTCATGTCATCTTGAATACTAGTATATGG
TTGTTGATTCCAAGAGGTTAGAGTGGTTGAAAATTA
>chr1B_1
GTGGGCAGTTTAGGGAGATGCGGTAACTCTACAATTGATGGGATAAAACTCGAGAATGGCGTTTTGGCTCTCGTCCTCCA
TGGAGGCTGA-TTTTTAAAAAATTCAAAATTTAAAAAAAGTCGATTTCCAAGAAATCTGGTTTTTTTTTGTATAAGTGAA
CAAGGATGTGAGGCGTATGTGTGTAAAAATTTCAAGATGCAATACGTTGAAATGCGACCTGT--AAAAAAATAAATTCAT
GATTTGGAAGGATGAATATTATCAA-------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------GTGTTAAA
AAGCTCCAGATTTGTCTTT----GCACAACCCTAATTTCGACGTATTGCATCCTAAAAATTTACACACCTGTGCACTATA
TCTTCATCTATCTTTGTTTTTTTTTTAGAATTTTTTGAAATGTGACAATATGAATTTTCACGAATTTTAAAATTTGCATT
TGGTAGCCTTCATGAAGCTCGGTCTCCAGAAGCAATTTCCGGATAAAACTCCCTCTTTACCTGTTAAAGAAAACGCCACA
TCGCAATTCTTTTTAACAAAAAACAAATCTAGCCTACGAACTACACATAC---CTCACACGGTCCGGGTCATACTTTGTG
CCGTTCCCCTATTATATAAAACCCAGCAAGCGAGTCGAGCGAGTGAGCTCA-GAGCACAGCAGCGGACACCGGCCAGGCC
ACACCACGCTCACGCCACCATCATAACGCCACTCCCACGCTCCACTCCGACTCCCATCGCGTTCCATTTCAAAAACGCCA
CCTTTCGCCCCCTGCATTTCCGCCGAAGTCTACATGTCTCCGACCACCGCCGCGTCCCCCGCGCCGGCGCCGGCAACCGA
CGCGCCCCCGAAGCCTTCGCCAGGCGCGAAGCGCAGCCTGATGGGGTCCCTCATCGACGCCACCGCGCTGCTCCGGGCGG
CCTCCTTCAAGGAGGACTCGTACGTGGCCGCAGCGCTCCCGGCCTCGGACCTCCGCGCGCTCGCCGACCTCAGGGCGCTC
CTCGCCACCCACCCGGACCAAATCTCCATCTGGGGCGTGCCGCTCAACCCGCCCAGCGACGCCCCCGCCGACGAGCGCAC
CGACGTCGTGCTCCTCAAGTTCCTCCGCGCCAGGGACTTCCGCGTCCGCGACGCGCACGCCATGCTGCTCCGCTGCGCCG
CCTGGCGGGCCGAGTTCCGCGCCGACGCCGTGCTGGACGAGGACCCCGGGTTCAAGGACCTGGAGGGCATCGTCGCCTAC
ATGCACGGCTGGGACCGCGAGGGCCACCCCGTCTGCTACAACGCCTACGGCGTGTTCAAGGACCGGGACATGTACAACAG
GGTGTTCGGCGACGGCGACCGCCTCAGCCGGTTCCTCCGGTGGCGCGTCCAGATCATGGAGCGCGGCGTGCGCGCGCTCC
AGCTCCGCCCCGGCGGCGTCAACGCCATCATACAGGTCACCGACCTCAAGGACATGCCGAAGCGAGAGCTCCGCGCCGCG
TCCAACCAGATACTCTCCCTCTTCCAGGACAACTACCCCGAGATGGTCGCCCGCAAGGTAACTCCTCTCCCTCCCCCCTT
GTCCGTGTGCCTGACACCCA----CATTTCGTCGAACACCTGCCATTTGCCTCACACCGTCCGTCGCCTGCACTTGCGTT
TGGCACCGAGCAGGTGTTCGTGAACGTGCCGTGGTACTTCTCCGTGCTGTTCTCGATGATCTCGCCATTCCTCACGGAGC
GCACCAAGAGCAAGTTCGTCATCGCGCGCGAGGGCAACGTCGCGGAGACGCTCTTCAAGTAAGCGCGCGCGCAGCTCCAG
TCGATGAGCTCAAGTTTTGCTTTTCCTCGTGGG---TCCTTCCCGAGAATGCTGACACGGCGGTTGCTTGTTCCCGTCGA
CAGGTTCATCCGGCCGGAGCTGGTGCCAGTGCAGTACGGCGGGCTGAGCCGCGCCAGCGAGCTAGAGAACGGGCCGCCCA
AGCCGGCGTCCGAGTTCACCATCAAGGGCGGGGAGAAGGTCTTCCTAGAGATCGACGGCATCGAGGTACATCCCGTTATC
CTACACGACAAAGCCATGCCCCCTCCCGAAGCTCTCCGCGTCGCACAGGAGTAATTTTACGTCGCCTTGCACATATAGCA
--------GTACAAATCTGCTGAAATAATAATGCACAAAAAAAAT----TCCTTTACAAGTGCACTATCCGTCACCTCCT
CGTGCCTGTCTCCATCCAGGTTCCCGAAATCGTCTTGTGCCTAAACAATTGCGGCCGGTGTGTTCGTTACCAGCCAAGAG
CACAAACGCAAGGCTTTGTTTCTTTGCTTTCGCCGTGTCCCAGGCATTTGGCTCCAAGCGCTTTGGTTCCAGCTCCTCCT
CCTGGTTCCTGGTTTTTACCTTTTCACCTCAACTTCGATTGAGAGGAGGATAGGCCATGCATACTACCTACCACGGTAGA
AGTAGCAAGCATCTTTCGACGAGATAGGATCCGTGGATGGATGGCAGTGCCGCATGTGGTGTGAGCGAGGCCACCCTTTC
ACCAATTTTGAAAAATCTCCGGCGTGGAACACTGCGAAAAGCCTTCTTGCCATGCCACCAGTGGACACTGCGTCAAGCAC
CACCGCAGTGGCCGCTGCCGCTGCCGCTGCGACCCTGCGAGACAGGGCTGACACGGGCATGGCATGGGACGGGGCCGGTT
TCCTGGGTTTCCTTGGGTTCAGACGGCGCGCTGGCTCACGCGCCTGGAAAAGCTGGGTTTACCTAGCTGTAACGCCGGTC
ACACTGGGCACGCACGTCCGCCGCTTCACGAGAGGGCTCACTCCCGTGAACGCAAA---ATAATAAATAATTAATCCAAC
AAGAGACAGCGG--------TGGCATGTGAGTTTCTCGGCCAGGTTTGAATGGAGTTCGCTCGCTCCGTTT-CGTTTCTT
CTCGGCACCGCAACGCCTCTGCCGCGGCTTGT-------CCTTGTTCTCCTCGTACGCGACGCAGCAGACGCGG-GCTGA
TGTGAGAGTTTTACGGGATAAAGTATTGGCGACGACAGCGGCCGTGCGCTCTTTTCCTAGCTTTGCTTTTGTTTACGGCT
CACGCCAC----------------------------TCGGCAACCCG----TGCTGGCAGCGGC------GACGTGGTGT
GGTGAAAGCGAAAAGAGTGAAGAGCGCTCACTGTTCTGTT-----------------CAAGTGCACTAGTAGTACGCATT
AGCAGGAACTGTCAAAAAA-GATTAGGGTAAATTTGGTAGTAAAGCCTCCGCTAATCTTTACGGAT---AGGAGTACAAA
GCTTCTACGTTCCCCTAATCGGAGGCGTAAAACGTCGTGG-GGAAAAGGGTGGTTCGTTTTTGTTCGCTAGTGGCTAGGC
TAGTGATGT--CAGTGATCAATTCTTTTCTTTCTTTTCCAGCAACAGTCGATTCTTCTCTTTAACCGCTGTAAAGAAATG
GGCACTGTTTTGGACTGTACGTCCAATGCTCATGTATGTGAGCACGTGGTAGGGCCCGTGATAAGAAATTTGCTGCTGCT
T-CTGAAGAACACAGGCGTGAAAAAGATAATTACTCCCTCAGTCCGAAAATACTTGTCTTCAAAATGGACAAAAGGAATG
TATTTAAAACTAAGTAATTCTGGACGGAGGGAGTACTTGTATAGTGGTAAAGTAATAATTGTACTCGGTACATTTGCATG
GCCATTTGAATACCGATGTGTTCTTGATTCGCAGGCCGGTGCAACAATAACGTGGGACCTGGTCGTCGGCGGCTGGGAGC
TGGAGTACGGGGCGGAGTACGTGCCGGCGGCGGAGGGAGGCTACACGCTGTGCGTGGAGAGGACCAGGAAGGTCCCGGCC
GCCGCCGCCGAGCCCGTGCACAACGCCTTCACGGCCAAGGAGCCCGGCAAGATGGTGCTCTCCATCGACAACTCCGGCTC
ACGGAAGCGGAAGGTCGCCGCCTACCGCTACTTCGTGCGCAAGCCGTCGGCGTAGGCT-ACCCTGCTGCTCGACTGCTGT
GGCCGGCGGCTTGCCGGCCGGCTTGTGCTTTGCTTTGCTGGGCGTCAGCTCGTCTCGGAGAGTAGATTAATTTAGGTCTA
TTTAATCAGTGCTATATAATGTGATATGCATGTATTATGGCATATGTAGAATATAATGTATGAGCCGTGAGATCCTACTT
GTCATCATCGTTATAAAAGCTAATGAGTTAAGTTTTTTTGGG--AAGTTTACGCTTGTCTATTTTGTAGTATTTACAGAT
GGCCAACGCTTTGGATTCCTTAATTCTATATGTTCTGTTTTGAGTAGGACCATTTCAAGTTGGAT---TTCCTTAAACCA
CCTTCTAGGCCCTGTTCGGGCGTCACGCGGGCAAACCACACAAATTCTAGAGATAGTGATGAAAACAGGAGGTAGGACCA
CAGTTCCTATGTTCCACATGGCAACCTAAATATCAGACACTCCAAGGACGTCATTTGTTGCGGCTTGCCCGTACTTTGGT
TGCAGGATTTTCAAGCACATGAATAGG--AAAAACATAGGGATTCGCCGATTAGGCCTACTCGATCGCAAGGTTTCAACA
ATGCATGAAGCATGAACATGAAAAATATAGGATGACTTGGGTTTAGTCACTTGGTAGTCTTTTTCCGCTTGCTTTTTATG
ATTTCTTTTGGGCGTATTCGTGATGTTGCCTCAGCAAACTATTTTATTTTCA----------------------------
GTGCAACACTTGACTTGGCTACCCGTAAAAAAAGAGACAAGGTTGTTTGGACATGTTGATTGCTTTATATATATAAAGC-
-GAAGCGAAAGCTTGTTTCAAGACATAAATACATGATGCAACTATTGTGTTCTTTTGAATTCTATATATAGGATTATATG
CGGGCTGAAGTTTGTTTTGCACCATGAAAAAAC-AAAGGATTGTTACTAACAGATTTAAGTGAATGGAATTTTCTTATGA
AACATAATGCAAAAGAATGCTAAGAAAGTTTATATATATGATTCAGTCCTACAAGTCAAACAACTTACATACAATTATTC
TTTTCTAAAGATTCTATGGCTCCAACATTTATATGAAAATATTCGCAAAAAATTTTTTATATGAAAACCCTTTGACTTGG
TAAATTCCACTGATTTTACGTATTCGGGATATCCAAGATCCATTTAGGAGTGTCATGTCATCTTGAGTACTAGTATATGG
TTGTTGATTCCAAGAAGTTAGAGTGGTTGAAACTTA
>chr1A_605
GTA-----------------------------------------------------------------------------
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----------------------------------------------------CTAAAAGTTCACACACTTGCCCACTATG
TCTTCATCTATCTCTGTA-TTTTTTCAGAATTTTTTGAAATGTGAAAATATGAATTTTCGTGAATTTTAAAATTTGCATT
TGGTGGCCTCCATGAAGCTCGGCCTCCAAAATTAATTTCCGGATGAAACTCCCTCTTTACATGTTAAAGAAA-CGTCACA
TCGCAATTCTTTTTAACAAAAAACAAATCTAGCCTACGAACTACACAT---ACCTCACACGGTCAGGGTCATACTTTGTG
CCGTTTCCCTAT--TATAAAACCCAGCAAGAGAGTCGAGCGAGTGAGCTCAAGAGCAGAGCAGCGGACGCC-----GGCC
ACACCACGCTCACGCCACCATCATAACGCCACTCCCACGCTCCACTCCGACTCCCGTCGCGTTCCATTTCAAAAACGCCA
CCTTTCGCCCCCTGCATTTCCACCAAGGCCTACATGTCTCCGACCACCGCCGCGTCCCCCGCGCCGGCGCCGGCAACCGA
CGCGCCCCCGAAGCCTTCGCCAGGCGCGAAGCGCAGCCTGATGGGATCCCTCATCGACGCCACCGCGCTGCTCCGGGCGG
CCTCCTTCAAGGAGGACTCGTACGTGGCCGCGGCGCTCCCGGCCTCGGACCTCCGCGCGCTCGCCGACCTCAGGGCGCTC
CTCGCCACCCACCCGGACCAAATCTCCATCTGGGGCGTGCCGCTCAACCCGCCCAGCGACGCCCCCGCCGACGAGCGCAC
GGACGTGGTGCTCCTCAAGTTCCTCCGCGCCAGGGACTTCCGCGTCCGCGACGCGCACGCCATGCTGCTCCGCTGCGCCG
CCTGGCGGGCCGAGTTCCGCGCCGACGCCGTGCTGGACGAGGACCTCGGGTTCAAGGACCTGGAGGGCATCGTCGCCTAC
ATGCACGGCTGGGACCGCGATGGCCACCCGGTCTGCTACAACGCCTACGGCGTGTTCAAGGACCGGGACATGTACGACCG
GGTGTTCGGCGACGGTGACCGCCTCAGCCGGTTCCTCCGGTGGCGCGTCCAGATCATGGAGCGCGGCGTGCGCGCGCTCC
AGCTCCGCCCCGGCGGCGTCAACGCCATCATACAGGTGACCGACCTCAAGGACATGCCGAAGCGAGAGCTCCGCGCCGCG
TCCAACCAGATACTCTCCCTCTTCCAGGACAACTACCCCGAGATGGTCGCCCGCAAGGTACTCTTCTTTTCCCTACTGCC
TTAGTTCGTGTGGTTTAAGACTCGCATTTCGTCGAACACCTGCCATTTACCTCACACCGTCGCCCA----CACTCGCGTT
TGGCACCGAGCAGGTGTTCGTGAACGTACCGTGGTACTTCTCCGTGCTGTTCTCGATGATCTCGCCCTTCCTCACGGAGC
GCACCAAGAGCAAGTTCGTCATCGCGCGCGAGGGCAACGTCGCGGAGACGCTCTTCAAGTAAGCGCGCGCGCAGCTCCAA
TCGATGAGCTCAAATTTTGCTTCTCCTCG---TCGCTCCGTCCCTATAATGTTGACACGGCGGTTGCTCGTTTC------
CAGGTTCATCCGGCCGGAGCTGGTGCCGGTGCAGTACGGCGGGCTGAGCCGCGCCAGCGAGCTGGAGAACGGGCCGCCCA
AGCCGGCGTCCGAGTTCACCATCAAGGGCGGCGAGAAGGTCTTCCTAGAGATCGACGGCATCGAGGTACATCCCGTTATC
CTACACGACAACGCCACGCCCCCTCCCGAAGTTCTCTGCGTCGCACAGGAGTAATTTTACGTCGCCTTACGCATATACTA
CTACTAGGGCACAAATCTGCTGAAATAATAATGCACAAAAAAAAGAAAATCATTTACGAGTGCACTATCCGTCACCTCCT
CGTGCCTGTCTCCATCCGGGTTCCCGAAATCGTCTTGTGCCTAAACAATTGCGGCCGGTGTGCTCGTTACCGGGCAAGAG
CACAAACGCAAGGCTTTGTTTCTTTGCTTTCGCCGTGTCCCAGGCATTTGGCTCCAAGCGCTCTGGTTCCAGCTCCTCCT
CC----TCCTGGTTTTTACCTTTTCACCTCAACCGCGATCGAGAGGACGATAGGCCATGCA---TACCTACCACGGTAGA
AGTAGCAAGCATCTTTCGACGAGATAGAATCCGTGGATGGATGGCAGTGCCGCATGTGGTGCGAGCGAGGCCGCCCTTAC
ACCAATTCTGAAAAATCTCCGGCGTGGAACACTGCGAAAAGCCTTCTTGCCATGCCACCAGTGGACACTGCGTCAAGCAC
CACCGCAGTGGCCGCTGTCGCCGCCGCTGCGACGCTGCGGAGCA-GGCTGACACGGGCATGGCATGGGATGGGGCCGGTT
TCCTGGGTTTCCTTGGGTTCAGACGGCGCGCTGGCTCACGCGCCTGGAAAAGCTGGGTGTAGCTAGCTGTAACGCTGGTC
ACACTGCGCACGCACGTCCACCGCTTCACGAGAGAGCTC----CCGTGAAGAGTAGCGTAAAATAAAATATTAATTAAAG
AAGAGAACGGTGGCATGGCATGGCATGTGAGTTTCTCGGCCAGGTTTGAATGGAGTTGGCTCGTTCCGTTTCCGTTTCTT
CTCGGCACCGCAACGCCTCTGCCGCCGCGGCTTGTCCGCCCTTGTTCTCCTCGTACGCGACGCAGCAGGCGCCGTGCTGA
TGTGAGAGTTTTACGGGATAAAGTATTGGCGACGACAGCGGCCGTGCGCTCTTTTCCTAGCTTTGCTTTTGTTTACGGCT
CACGCCACGGCGCGGGTCTCCACGCGCTGTCACCACTCAGCAGCCCG----TGCTGGCAGCGGCAGCGGCGACGTGGTGT
GCTGAAAGCGAAAAGAGTGAAGAGTGCTCACTGTTTTGTT-----------------CA-----------AGTACGCATT
AGCAGGGACTGTCAAAAAAAGATTAGGGTAAATTTGGCGGTAAAGCCTCCGCTAATCTTTGCGGGTACGAGTACTACAAA
GCTTACGCGTTCCCCTAATCGGAGGCGTAAAA---------------GGGTGGTTCG-TTTTGTTCGCTAGTGGCTAGGC
TAGTGATGTGTCAGTGGTCAATTCTTTTCTTTCTTTTCCAGCAACAGTCGATTCTTCTCTTTAACCGCTGTAAAGAAATG
GGCACTGTTTTGGACTGTACGTCCAATGCTCAC----GTGAGCACGTGGCGGGGCCCGTGACAAGAAATTTGCTGCTGCT
TCCTGAAGAACACGGGCGCGAAAAAGATAATTACGT--------------------------------------------
---------------------------------TACTTGTATAGTGGTAAAGTGGTAATAGTACTCG-TACATTTGCATG
GTCATTTGAATACCGATGTGTTTTTGATTTCCAGGCCGGTGCAACAATAACGTGGGACCTGGTCGTCGGCGGCTGGGAGC
TCGAGTACGGCGCGGAGTACGTGCCGGCGTCGGAGGGCGGCTACACGCTGTGCGTGGAGAGGACCAAGAAGGTCCCGGCC
GCCGCCGACGAGCCCGTGCACAACGCCTTCACGGCCAAGGAGCCCGGCAAGATGGTGCTCTCCATCGACAACTCCGGCTC
ACGGAAGCGGAAGGTCGCCGCCTACCGCTACTTCGTGCGCAAGCCGTCGGCGTAGGCT---------GCTCGGCTGCTGT
GGCCGGCGGCTTGCCGGCCGGCTTGTGCTTTGCTTT-----------GCTCGTCTCGGAGAGGAGGTTAATTTAGGTCTA
TTTAATTAGTGC--TATAATGTGATATGCATGTATTATGCCATATGTAGAATATATTGTATGAGCCGTGAGATCCTACTT
GTCATCATCGTTATATAAC-----GAGTTAAGTTTTTTTGGGGGAAGTTTACGCATCGTTACCC----------------
----------------------------TATGTTTTGTTTTGAGTAGGACCATTTGAAGTTGGAA---TTCCTT-AACCA
CCTTCTAGGCCCTGTTCGGGCGTCACGCGGGCAAA-CACACAAATTCTAGAGATAGAGATGAAAACAGGAGGTAGGACCA
CAATTCCTATGTTCCACATGGCACCCTAAATATCAGACACTCCAAGGACATCATATGTTGCGGCCTGCCGGTACTTTGAT
TGCAGGATTTTCAAGCACATGAATAAGAAAAAAACATAGGGATTAGCCGATTAGGCCTCCTCGATCGCAAGGTTTCAACA
ATGCAT-------GAACATGAAAAATATAGGATGACTTGGGTTTAGTCACTTGGTGGTCTTTTACCGCTTTCTTTTTCTG
ATTTCTCTTGGGCGTATTTGTTGTTG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
>SNPs
----S------------S---S---------S----S----------------------------S-----------SS-
----S--SS-S-----S--------------S-----SSS-S-S--SSS--SSSSSSS--------------S-------
--------------------S------------------S--S----------S-S--S---SS-------S--S-----
---S---S----------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
----SS-------------SSSS----------S-------------S-S------------------------------
--------------------------SSS----------S----------------------------------------
---S----------S-----------------------------------------------------------------
---------------------S----------------------------S---------S-------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
-------------------------S---------------------------S--------------------------
-----S------S-----------S-------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S----------------------------------SS---------------
-------S--S-------------------S----------------------------------------------S--
----------------------------------------------------S-S-------------------------
-------------------------------------------------------------S------------------
-------------------------S----------------------------------------S-------------
-----------------S-------------S-----------S------------------------------------
-----------------------S--------------------------------------------------------
-------------------------------------------------------S------------------------
----------------------------------------S-------------------S----------------S-S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
---------------------------S------------------------------S---------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-------S---------------
-------------------------S------------------------------------------------------
-----------S---S----------------------------S--SSSS--------------------SSSSSS---
-------------------SSSSS-SSSSSS-S-S--SSSSSSSSSSSSSSSSSSSS-----------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
---------------------------------------S----------------------------------------
-S------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S-----------------------------------------------------S------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S----------------S----
-----------------------S--------------------------------------------------------
--------------------S------------------------------------------------S----------
----------------------------------------------------S-------S-------------------
S-----S-------------S----S----S-----S--S-------------------------SSS------------
----------------S---S-------------------S------------S---S----------------------
--------S-------S---------S-----------------S-----------------------------------
-SSS-----------------------------------------------------------------S------S---
-----S------------------------------------------------------------------------S-
---------------S-------------S---------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
------------------S-----------S--S----SS-------S-----------------------------S-S
S--S----------------S-------------S----S-------------------------------------S--
--S---S-----------S--------------S----------------S------S------------------S---
---------------------------S--------------------------------------------S-------
S-------------------------------------------------------------------------------
---------S---------SS----------S-------S--------------------------S-------------
---------------S----------------S---
>forward_474
--------------------------------------------------------------------------------
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------------------------------------------------------TAAACAAGGATGCGAGGCGT------
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------------------------------------
>reverse_2065
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----------------------------------------------------------------ACGCAGCTCCAATCGA
TGAA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------
>forward_476
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------AACAAGGATGCGAGGCGTAT----
--------------------------------------------------------------------------------
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------------------------------------
>reverse_2213
--------------------------------------------------------------------------------
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----------------------------------------------------TCAAGCGAGCTGGAGAACG---------
--------------------------------------------------------------------------------
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------------------------------------
>forward_2088
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------ACGCAGCTCCAA
TCGATGAA------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------
>reverse_3434
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-------------------------------------------------------------------------CGACGTG
GTGAAAGCGAAAA-------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------
>forward_2718
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----------------------------------------------------------CATGCGTACCTACCACGGTT--
--------------------------------------------------------------------------------
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------------------------------------
>reverse_4344
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-----------------------GGTGCTTTGCTTTGCTCGTC-------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------
>forward_3481
--------------------------------------------------------------------------------
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---------------------CGCTCGGTGTTTTGCTCAAG---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------
>reverse_5039
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------CG
GTGCAACACTTGACTTGG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
