>input_sequence_21993
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-----------------------------------------------------------GCCCCAGATCCGCGGCCATGG
CGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGCGACAGCGGGTGCGTGCGCGGCAATCACTCACGCCTTCCA
CCCCAC--TTTTGTTTTGGATTTCCTTTCGGGTGTGATGTTTCGCTCTTGTCTGATCACCCTTGCCTGCGCTTTTGTTTT
TGT-T---CGTCGTCAGGGTCGGGAAGACGTCGCTGATGAACCAGTAAGGCCGAACGG-CAATCTCTCCCTGTCCGATTC
GTCTGATTCGGGTTATTTCTGTGCGGGGGGTTTGAACGATCTGGGTGGTTGGTTCCTGTGCAGGTACGTCAACAACAAGT
TCAGCAACCAGTACAAGGCCACCATCGGCGCCGATTTCCTCACCAAGGAGGTCAAGATCGACGACCGCCTCTTCACTCTA
CAGGTTCTTCATTCAATCTACTAC----------------------------------TGACGTGCTTGGTGCTAGT---
--TTTATTGTTGGGCAATTAGCTCTGGGTGTATTA------GAACACTAACAGATTCTATGCTGTTAGAGATGTGAGTAT
GTGACACTTGCGTGAAACCGAAAAGTTCCCATTCTCTGGTTACTGTTCTGAATTCTTGAG--------------------
--------------------------------------------------------------------------------
------------TAGGTCCGATGATGATCAAGTTTAGTGGTAGTACTACTAAACTAGGACCCTTGTACTCTGCAGTTTGT
TTATGA----CAGGTTGAGAAGGTTGGTTCCTGAGTTATTCAGGTCAACATAAGCGACATTTTTGGTTTATTATAGAGTT
ATGTACTTTTGCAAACGTTCTGCTGGTGGGTGATTATCGGATAGGTTAATGCAATTACAGATGGTTGGATTGTTTTTAGG
GTAGATTTACCTTTACCCAATTCGAAAGAATATACTTTTGCAAACGTTCTG--------CTGGTAGGTGCTTATCGGATA
GGTTAATGCGGTTACAGATGGTTGGATTGTTTTTAGGGTAGATTTACCTTACCCAATCGAAAGGCACATTATGTCATAAG
AAATTACATCAGTTCAGCTCTAGTTCAGTTGTCCACTTGGTTTGCACTGCCTCTATATTACAATTTCTCAAGGATTAGAG
GACTGAGACCGTA-------------------------------------------------------------------
-------------------------------------------------------------------------GTTCAGA
GGGAAAAATAATAATTAGAAACAATGCAGGGGAATTGCATGTCTGTGCATTAAGA--------CAGAGAGAAAGCTGTCT
TA-CACCTTCCAGTGGCCCAACACTATGTGCATGAACAAAGAAAAATAAAATCTGGCGAAGTCCAGAGGAAACATGACTT
TTGCTAAGTTATGGCTTCAC--------TAATGTGAGTTACTATTAAAAAGCTATGCAATATTACTTATATTGTAGCCAT
CGGTCCTATCCTTTTTT---ATCTTACTCTGGGGTCTCTTTCTGTTACTCTGTTACATATAGTATAATTGATGCG-TCCC
AATACTGCAGTACTCTGATTGTCATAAATTGATTAACACATAGGTACCATTACTCGAACTTTATGGACCATGTACCGACT
TGCTTGCTTTGGTTAAGAATAAGAAATTTCCAGATTTTTATGACTGGGAATGAACTACTTTGTTGAGCTGTTATCCGCTG
GCACTCAACTTTCTTAAATCTGGACTAGAGTATTGAACGTTCAGAGACCCTGCCATCTTTTCTATTTAACAGGACAGCAA
TGAAACAGCCTGTTCAGCTGCGTTCTCTATGGCCCATCTCTCATTCATCATATTTAAATCAAGGATATGACCATATGGGA
TAGCCAAACAATTCATTTATACCTATACCTGAGGTTCAGACATTTGTCTTTTTATCCCCGCCGGGTAGTTTATTTGAATA
AGCATAAACAAATGATTTTTTTTTTGGAGTCCACTGTCTTTTTAGTTATACAATAGCAAACTTTGTATTTGGTATGCTGC
TTGATTTGATTCTAGCTATTTTACTTGATTTACAAATTTTCCGATGGCTGTGATTACTTGATAACATTAGATACTTTTTT
ACAATAGCAAACTTTGTATTTGGTATGCTGCTTTATTTGATTTTAGCTATTTTACTTGATTTACAAATTTTCTGATGGCT
GTGATTACTAGTTGATAACATTAGATACTTTTCTAAGATGAAATGAACTGAAGTATGAACAACATTCTTAAATAATCTTG
ACTGCAAGTGAAAATAATTGTACTCTCTTTAAAAAAGATGGAAACAAATACGAAGAACATTCTGTTACGTTTTCGTTAAT
ATCGGTCCAATGATTTTATTACTTAAATTATGTATTTTGCACAATTCAGTGAAGTAACTCTGTGTGCATTCACCGGACGC
TTAATATGGTTGATGTTATTTTGCTAGTGCAAATGGCCTAGCTGCTTATAGTTTTTTTTTCT--GTTCTGCTTTTGCGTG
TATTTTGTTTTTGGTTGCTGTG--AAGCCTTCATTTTTGTTGTGCTTGCTGCTGTGTGTCTTTCTTCTTCTATTGCAAAG
AAGCGTGGATTGCGTGCGTTATTGGGACAAAAAAAGCGAACTAACCCCAAA-TCTTCACTGCCCTAGCTAGTTAATCATT
ACGTATATCTATAGCCTGATTATTTTTATGAGAACACTA-GAATGTACATCTGTCTACTTTGTTCCTTGTGAAACAATAG
TTCCACTCTCATTTAATCTTACCACATTTTTGTTTTTCCTGGAACCTAGATATGGGACACGGCTGGACAGGAACGTTTTC
AGAGTCTCGGTGTGGCGTTTTACCGGGGAGCTGACTGTTGTGTTCTTGTATATGATGTCAATGTTACCAAGTCGTTTGAA
AAACTCAACAACTGGCGTGAGGAATTTCTAATTCAAGTAAGTAGCTTGCTTAGTTGCCGGTCGATCAAATGTACTGCAAT
ATGTATGGTATATTGAAAGTTTGGCCCGTCATTCCTGTTGCAGGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTT
TACTTGGAAACAAGATTGATGTTGATGGTGGTAACAGCAGGACTGTGAGTATTCTTCGCGACAAAGTGCCTATTTTTCTT
GCTTTCACTTGATATATATACTTTATGATATTTTTGAGACCACTTGTCTTTCAGGTTTCTGAGAAAAAGGCTAAAGCTTG
GTGTGCTTCCAAGGGAAACATCCCTTATTTTGAGACGTCTGCTAAAGAAGGCTTCAATGTGGAAGCAGCTTTCGAGTGTA
TAGCAAGGAATGCTATCAAGAATGAACCTGAAGAAGATATGTAAGTTTACTTCTTGCAGTAGATGCGTTGTTTACACAAA
GGGATAATTCTT--------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CTAGAAGATAAGGATCCCCCTCAGTTTGGATTGGCTTGGTGGTGCTCGCTCTTCCCGA
GTTTGATATAT---------------------------------------------------------------------
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---------------------------------
>chr3A_1_TraesCS3A01G152300
TGTCGTTACCCAGTTAGAGTCTGGATAATGATCAAAACATGGCTTGGTTTACATGATGTCCATCCTACGAATTGGGGAGG
CATGGTTCCTATCAAGGAGTGGTGGCACAACATTGCTTCTGGGAGGTCACAATCTCGAAGGGCGCTTCTTTCCCTTATGC
TTCTTATCTCTTGGGAAATCTGAAACGAGCGAAATGCACATGTGTTCCGCAGCACCGTGATTCCGGTCGGGGTGATTGCA
ACTCACATCAAAGCGAAAACTTCATTGTGGTGCCTTGTCGAGGCGAAATATTTATGTAATATAATGCCGCGAGAGTGATG
CTTGTTACCTGGCCTTTGGCCAAGATTCTTAAACCTTCTTATTCAAGCCATTTTCCTTGTTTCAAAAAAATAAAAATAAT
AAAATCTTAGCCACAGACCAGACGACCCCTGCCTGCGTTCATTCTGGCTTAACTTTCTTCGTAAAATCTGTAGCAGGTGC
AGTATGAAAGAGACAACAGTTACTAGTCGGCAGTACATTAGTCCCTTCTTTCCAGCACTGAAGACACCGTGTGCACATGC
ATATATGTGCCACTCAGACGCGGATGAACCGTGTACAATAATAATTTTTAATTA------------TCATACTTGTAGGT
AGCACAGAGCCATCAGTTGGACAAAATCTGCCTGTCCCAATCAATCTTATTTTTT------ATTATCATCGACGATTAAT
AAATAATG------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AAAACAATACTGC
TGTCTGTCTGTCTGTCGCTACTCTAAAAAATTGACGGAGTAATAATTCGCCCGCCCGGCAACGCGTCCACCCAAAC----
-GAAACAGGTGGAGGCGGAGCGGCGAAGCCTTCCAACAAAACC------------GATCTTTCTCCTTTCCCGCTACAAC
GGCGCGCACACACCAATCCCAAAGCAAAGCCAAG--CAAACCAGACCAACACACGGCGCAAAATCTTCCGACCTCC--TC
CTCCTCCTCAGCACCCGCTCCCCCCTTACCCCCCGCCCCGCGCGTAGCCCCGCCCTC-CGCCCCAGATCCGCGGCCATGG
CGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGCGACAGCGGGTGCGTGCGCGGCAATCACTCACGCCTTCCA
CCCCAC--TTTTGTTTTGGATTTCCTTTCGGGTGTGATGTTTCGCTCTTGTCTGATCACCCTTGCCTGCGCTTTTGTTTT
TGT-T---CGTCGTCAGGGTCGGGAAGACGTCGCTGATGAACCAGTAAGGCCGAACGG-CAATCTCTCCCTGTCCGATTC
GTCTGATTCGGGTTATTTCTGTGCGGGGGGTTTGAACGATCTGGGTGGTTGGTTCCTGTGCAGGTACGTCAACAACAAGT
TCAGCAACCAGTACAAGGCCACCATCGGCGCCGATTTCCTCACCAAGGAGGTCAAGATCGACGACCGCCTCTTCACTCTA
CAGGTTCTTCATTCAATCTACTAC----------------------------------TGACGTGCTTGGTGCTAGT---
--TTTATTGTTGGGCAATTAGCTCTGGGTGTATTA------GAACACTAACAGATTCTATGCTGTTAGAGATGTGAGTAT
GTGACACTTGCGTGAAACCGAAAAGTTCCCATTCTCTGGTTACTGTTCTGAATTCTTGAG--------------------
--------------------------------------------------------------------------------
------------TAGGTCCGATGATGATCAAGTTTAGTGGTAGTACTACTAAACTAGGACCCTTGTACTCTGCAGTTTGT
TTATGA----CAGGTTGAGAAGGTTGGTTCCTGAGTTATTCAGGTCAACATAAGCGACATTTTTGGTTTATTATAGAGTT
ATGTACTTTTGCAAACGTTCTGCTGGTGGGTGATTATCGGATAGGTTAATGCAATTACAGATGGTTGGATTGTTTTTAGG
GTAGATTTACCTTTACCCAATTCGAAAGAATATACTTTTGCAAACGTTCTG--------CTGGTAGGTGCTTATCGGATA
GGTTAATGCGGTTACAGATGGTTGGATTGTTTTTAGGGTAGATTTACCTTACCCAATCGAAAGGCACATTATGTCATAAG
AAATTACATCAGTTCAGCTCTAGTTCAGTTGTCCACTTGGTTTGCACTGCCTCTATATTACAATTTCTCAAGGATTAGAG
GACTGAGACCGTA-------------------------------------------------------------------
-------------------------------------------------------------------------GTTCAGA
GGGAAAAATAATAATTAGAAACAATGCAGGGGAATTGCATGTCTGTGCATTAAGA--------CAGAGAGAAAGCTGTCT
TA-CACCTTCCAGTGGCCCAACACTATGTGCATGAACAAAGAAAAATAAAATCTGGCGAAGTCCAGAGGAAACATGACTT
TTGCTAAGTTATGGCTTCAC--------TAATGTGAGTTACTATTAAAAAGCTATGCAATATTACTTATATTGTAGCCAT
CGGTCCTATCCTTTTTT---ATCTTACTCTGGGGTCTCTTTCTGTTACTCTGTTACATATAGTATAATTGATGCG-TCCC
AATACTGCAGTACTCTGATTGTCATAAATTGATTAACACATAGGTACCATTACTCGAACTTTATGGACCATGTACCGACT
TGCTTGCTTTGGTTAAGAATAAGAAATTTCCAGATTTTTATGACTGGGAATGAACTACTTTGTTGAGCTGTTATCCGCTG
GCACTCAACTTTCTTAAATCTGGACTAGAGTATTGAACGTTCAGAGACCCTGCCATCTTTTCTATTTAACAGGACAGCAA
TGAAACAGCCTGTTCAGCTGCGTTCTCTATGGCCCATCTCTCATTCATCATATTTAAATCAAGGATATGACCATATGGGA
TAGCCAAACAATTCATTTATACCTATACCTGAGGTTCAGACATTTGTCTTTTTATCCCCGCCGGGTAGTTTATTTGAATA
AGCATAAACAAATGATTTTTTTTTTGGAGTCCACTGTCTTTTTAGTTATACAATAGCAAACTTTGTATTTGGTATGCTGC
TTGATTTGATTCTAGCTATTTTACTTGATTTACAAATTTTCCGATGGCTGTGATTACTTGATAACATTAGATACTTTTTT
ACAATAGCAAACTTTGTATTTGGTATGCTGCTTTATTTGATTTTAGCTATTTTACTTGATTTACAAATTTTCTGATGGCT
GTGATTACTAGTTGATAACATTAGATACTTTTCTAAGATGAAATGAACTGAAGTATGAACAACATTCTTAAATAATCTTG
ACTGCAAGTGAAAATAATTGTACTCTCTTTAAAAAAGATGGAAACAAATACGAAGAACATTCTGTTACGTTTTCGTTAAT
ATCGGTCCAATGATTTTATTACTTAAATTATGTATTTTGCACAATTCAGTGAAGTAACTCTGTGTGCATTCACCGGACGC
TTAATATGGTTGATGTTATTTTGCTAGTGCAAATGGCCTAGCTGCTTATAGTTTTTTTTTCT--GTTCTGCTTTTGCGTG
TATTTTGTTTTTGGTTGCTGTG--AAGCCTTCATTTTTGTTGTGCTTGCTGCTGTGTGTCTTTCTTCTTCTATTGCAAAG
AAGCGTGGATTGCGTGCGTTATTGGGACAAAAAAAGCGAACTAACCCCAAA-TCTTCACTGCCCTAGCTAGTTAATCATT
ACGTATATCTATAGCCTGATTATTTTTATGAGAACACTA-GAATGTACATCTGTCTACTTTGTTCCTTGTGAAACAATAG
TTCCACTCTCATTTAATCTTACCACATTTTTGTTTTTCCTGGAACCTAGATATGGGACACGGCTGGACAGGAACGTTTTC
AGAGTCTCGGTGTGGCGTTTTACCGGGGAGCTGACTGTTGTGTTCTTGTATATGATGTCAATGTTACCAAGTCGTTTGAA
AAACTCAACAACTGGCGTGAGGAATTTCTAATTCAAGTAAGTAGCTTGCTTAGTTGCCGGTCGATCAAATGTACTGCAAT
ATGTATGGTATATTGAAAGTTTGGCCCGTCATTCCTGTTGCAGGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTT
TACTTGGAAACAAGATTGATGTTGATGGTGGTAACAGCAGGACTGTGAGTATTCTTCGCGACAAAGTGCCTATTTTTCTT
GCTTTCACTTGATATATATACTTTATGATATTTTTGAGACCACTTGTCTTTCAGGTTTCTGAGAAAAAGGCTAAAGCTTG
GTGTGCTTCCAAGGGAAACATCCCTTATTTTGAGACGTCTGCTAAAGAAGGCTTCAATGTGGAAGCAGCTTTCGAGTGTA
TAGCAAGGAATGCTATCAAGAATGAACCTGAAGAAGATATGTAAGTTTACTTCTTGCAGTAGATGCGTTGTTTACACAAA
GGGATAATTCTT--------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CTAGAAGATAAGGATCCCCCTCAGTTTGGATTGGCTTGGTGGTGCTCGCTCTTCCCGA
GTTTGATATATATATTTAGTTTGAAAGCTGCTATCTTGTATCGGTTGCTACATATGGTTGTCTAGTATTCGCTCCCTTCT
AGCGAGATGGGAGAAATTTCATTCATAACTTCTGATTCTTTGTATGAGCGTTAGATGGTATAGAGTTGGCATTCTTTTTA
GTTTTTGCGAGGTTTTGGTTGTCGTGGTGCGTACATATCCCAGAAAGATCAAATATATATATTTATGAAGATTGTAAATG
GACAGGAGAACGGCCCAATATTCGTGCTTTCCTCTTCTAACCATTTTGATGGTAGATCCAGATCTACATC--TACATGGT
TCATCTTTTACCCATCTATTTTCATTTCCATTCCTCTCTTCCATGGTATA-------TATAGATCAGCCACTAAGATTTT
CATTTCCGTGTATTCATGCTGTTGTTTGCTGCAATGATGTGACA------CAAGATTGGACTTTGCAGATTCCACTCTTA
TGTCATGTGTAGGTCCCTAATGGTGTTCATTTATCAAATTTATGGAAGGACCATGCTCACTTTCAATGATTGCTACAGTT
TGTCTTGATTTCTGTTGTTGACATCTCCA--------------------------------GCGAGAACATAGTCGACTA
CACGCTGTGCCATTTGAACTATTGGATTCGCCTTTCCTGTCAGCGCCATGCATGTGCCCAAATGCAAAACGAACTCATT-
--TTCATTTCCTACTACAGAGCAGCAACAT--CTGGTCTATACTGCGTGCGGTGCTCGTGAACTTCTGAAAGTTGTGGCC
ATGCTGAGAGCTCCCAAAAATAAACTGCCAAATCTACAGTTTGTCCGCATCGATCAGAATTAGAAACCACAAACCAAAAG
TTGTGGTAGC---------CGCTGCACCGTTGAAATGCATTCCAAACTGGAGCGGTTTAGTTTAGTTTCAGAAGTTGGGA
GGGGGGAAAACAAATCGGAGATTGCATTAGCAGGTTTCAACCAGTGTCAGATTTTGGAAAGCTTCAGTTTGTGCAATTTT
AAGCC-GACAGGTATGGGCAACTTCTAGTCACC
>chr3D_403
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--AATTTTAGCCTCAAACCAGACGACCCCTGCA----TTCATTCTAGTCTAACTTTCTCCGTAAAATCTGTAGGTGCAGT
AGTCGGCAGTAGT------------------AGTACATTAATCCCTTCTTTCCAGCACTCGAGACACCGTGTGCACATGC
ACATATGTGTCACTCAGACGCGGATGAACCGCGTACAATAATAA-TTTTAATTA------------TCATACTTGTAGGT
AGCACAGAGCCATCAGCTGGACAAAATCTGCCTGTCCCAATCAATCTTATTTTTT------ATCATCATCGACGATAAAT
ATGAAACAATACTGAGGTTAAGGCCCTTATGGAAGGGAGGGAGTTTGTTTCATATAGAAATTTAGAAGAGAGCAAAATAG
GGTAGCAAATTGATTGGCTGTTTACAGTCGTACTGAGTCTTGCACGGCTGTTTGGATGAACAGAGGTCCTTCATGTATTG
AGGAATTGTTACCTCTAGATTGTAACCCTATTATTTTGAATAAAATTTCCCTTTACCTCGCAAAAAAAAAACAATACTGC
TGTCTGTCTGTC----GCTACTCTAAA-AATTGACGGAATAATAATTCGCCCGCCCGGCAACGCGTCCGCCCAAAC----
-GAAACAGGTGGAGGCGGAGCGGCGAAACCTTCCAACCCAACAAAAACGCCTTTGGTTCTTTCTCCTTTTCCGTGACAAC
GGCGCGCACACACCAATCCCAAACCAAAGC-AAGGCCGAACCAGACCAACACACAGCGCAAAAATCTTCCGAT-------
---CTCCTCAGCCCCCTCT-----------CCCCGCCTCGCGCGTAGCCCCGCCCCCTCTCCTCAGATCCGCGGCCATGG
CGTCGCGCAGGCGAATGCTCCTCAAGGTCATCATCCTCGGCGACAGCGGGTGCG----CGGAACTCAGTCACGCCTTTTC
CCCAGT--TTTTTTC-------TTCCTTTTTGCGTGATTTTCCACTGTCCTCTGATCAACCTG---TGCGCTTCTGTTCT
CGGAT---CGCCATCAGGGTCGGGAAGACGTCGCTGATGAACCAGTAAGGCCGAACGG-CAATCGCGCCCTGTCTGATTC
GTCTAATTCTGGTTATTTCTGTGCGGG-GGTTTGAACGATTTGGGCGGTT----CCTGTGCAGGTACGTCAACAACAAGT
TCAGCAACCAGTACAAGGCCACCATCGGCGCCGATTTCCTCACCAAGGAGGTCAAGATCGACGACCGCCTCTTCACTCTA
CAGGTTCTTCATTCATTCTATTCATTGATTTTTTTCCCTAGCTCAACTGCCATTGGATTGACATGCTTGGTGCTAGCTTT
TATTTACTGTTGGGTAGTTAGTTCTGGGTGTCTTAGATCTTTAGCACTAACGGATTTTATGCTGTTTGAGATGTGAACTT
GCGTCAAATCAATTTGCG----AAGTTCTTATTGTCTGGTTAGTGTTCTGAATTCTTGAACACTACCTCCGTTCCTAAAA
TATAAGATGTTTTTGATAATTTAATGCACATTAAAATGGGTACATGGGAATAAAAAAATGCTAAAGCATCTTATATTCAG
GAACAGAGGGAGTAGGTTTGATGATGATCAAGTTTAGTGG------TACTAAACTAGGACTCTTGTACTCTGCAGTTTGT
TTATGA----C---------AGGTTGATTCCTGAGTTACTCAGGTCAACATAAGTGACATTTTTGGTTTATTATAGAGTT
ATGTACTTC-----------------------------------------------------------------------
--------------------------------------TGTAAACATCCTG--------CTGGTAGGTGTTTATTGGATA
GGTTAATGCGATTACAGATGGTTGGATTTGTTTGGGGGTAGA---------------------------TATGTCATAAG
AAATTACATCAGTTCAGCTCTAGTTCAGTTGTCCACTTGGTTTGCACTACCTCTATATCACAATTTCTCAAGGATTAGAG
GACTGAGACC-TA-------------------------------------------------------------------
-------------------------------------------------------------------------GTTCAGA
GGGAAAAATACTAATTAGATATGATGCAGGGGAATTGCATGTCAGTGCATTAAGAGTTTAAGACAGAGAGAAAGCTGTCT
TAACAC-TTCCAGTGGCCCAACACTATATGCATGAACAAAGAAAAATAAAATATGTCCAAGTCCAGAGGAAACACGACTT
TTGCTAAGTTATGGCTTCACTAATGTCATAATGTGAGTTACTATTAATAAGCTATGCAATATTACTTATATTGTAGCCAT
AGGTCCTATCCTTTTTTTTTATCTTACTATGGGGTCTCTTTCTGTTACTCTGTTACATATAGTATAATTGATGCA-CCCC
AATCCTCCAGT-CTCTGATTGTCATAAATTGATGAACACATAGGTAGTATTACTCAAAC-TTATGGACCATGTACCGGTA
TGCTTGCTTTGGTTAAGACTAAGAAATTTCCAGATTTTTATGACTGGGAATGAACTACTTT-TTGAGCTGTTATCTGCTG
GCACTCAACTTCCTTAAATCTGGACTAGAGTATTGAACGCTCAGAGACCCTGCCATCCTTTCTATTTAACAGGACAGCAA
TGAAACAGGCTGTTCAGTTGCGTTCTCTATGGCCTATCTCTCATTCATCATATTTAAATCAAGGATATGACCATATGGGA
TAGCTAAACAATTCATTTATACCTATACCTGAGGTTCAGACATTTGTCTTTTTATCCCGCCA-GATAGTTTATTTGAATA
AGCATAAACAAATGGATATTTTT-CGGAGACTGCTGTCTTTTTAGTTATATAATATCAAACTATGTACTTGGTATGCCTG
TTAAAAAAAA-C--------------------------------------------------------------------
-------------------TTGGTATGCTGGTTGATTTGATTTTAACTATTTTACTTGATTTACAAATTATCTTATGGCT
GTGAGTACTAGTTAATAACATTAGATACTTTTCTAAGATGAAATGAACTGAAGTATAGAT----------AATAATCTTG
ACTGCAAGTGAAAATAATTGTACTATCTTTAAAAAAGCTGGAAACAAATTTGAACAACATTCTGTTACGG-TTCGTTAAT
ATCCGTCCAATGATTTTATTACTTAAATTGTGTATATTGCACAATTCAGTGAAGTAACTCTGTGTGCAATCACCGGACGC
TTAATATGGTTGAGGTTATTTTGCTAGTGCAAATGGCCTAGCAGCTTATAGTTTTTTTTTGTTAGTTCTGCTTTTGCATG
TATATTGTTTTTGGTTGCTGTG--AAGCCTTCA-TTTTGTAGTGCTTGCTGCTTTGTGTCTTTCTTCT---ATTGCAAAG
AAGCATGGATTGTGTGTGT------------------------------------------------GTAGTTAATCATT
ACA------TATAGCCTGATTAATTTTATATAAGAACACTGAATGTACATCTGTCTACTTTGTTCCTTGTGAAACAATAG
TTCCACTCGCATTTAATCTTACCACATTTTCGTTTTTCCTGGAACTTAGATATGGGACACGGCAGGACAGGAACGTTTTC
AGAGTCTTGGTGTGGCATTTTATCGGGGAGCTGACTGTTGTGTTCTTGTATATGATGTCAATATTACCAAGTCATTTGAA
AAACTCAACAACTGGCGTGAGGAATTTCTAATTCAAGTAAGTAGCTTGCTTAGTTGCCAGTCAATCAAATATACTGCAAT
ATGTATGGTATATTGAAAGTTTGGCCTGTCATTCTGGTTGCAGGCTAGCCCATCAGATCCAGAGAATTTCCCTTTTGTTT
TACTTGGAAACAAGATTGATGTTGATGGTGGTAACAGCAGGACTGTGAGTATTCTTCACGACAAAGTGCCTATTTTTCTT
GCTTTGACTTGATATATAT------TGATATTTTTGAGATTATTCGTCTTTTAGGTTTCCGAGAAAAAGGCTAAAGCTTG
GTGTGCTTCCAAGGGAAACATCCCTTATTTTGAGACGTCTGCTAAAGAAGGCTTCAATGTGGAAGCAGCTTTCGAGTGTA
TAGCAAGGAATGCTATCAAGAATGAACCTGAAGAAGATATGTAAGTTTACTTCTTGCAGTAGATGCATTGTTTATACAAA
AGGATAATTCTCTCT--ATTATTTTCCTCGGAGGGGAGGGCATTTCGAAATAGCAACACAGAGAT--ACTAACAGTATGT
TAGCAGTTATATTGACGTTTTGCTAAATTCTTTTAGATATCTCCCTGATACAATCGACATGGGCGGTGCTGGAAGGCAAC
AACGCTCGTCAGGCTGTGAATGCTAGAAGATACGGATCCTCCTCAGTTTCGATTGGCTTGGTGATGCTCGCTCTTCCCGA
GTTTGATATATATATTTAGTTTGAAAGCTGCTATCTTGTATCAGTTGCTACATATGGTTGTCTAGTATTCACTCCCTTCC
AGCGAGATGGGAGAAATTTCATTCATAACTTCTGATTCTTTGTATGAGGGTTAGATGGTATAGAGTTGGCATTCTTTTTA
GTTTTTGCGAGGTTTTGGTTGTCGTGGTGCGTACATATCTCAGAAAGATCAAATATATAT--TTATGAAGGTTGTAAATG
GACAGAAGAACGGCCCAATATTCGTGCTTTCCTCTTCTAACCATTTTGATGGTAGATCCAGATCTATATC--TATATGGT
TCATCTTTTACCCATCTTTTTCA--TTCCATTCCCGTCTTCCATGGTATA-------TAT-GATCAGCCACTACGGTTTT
CATATCTGTGTATTCATGCTGTTGTTTGCTGCAACGATTTCGATGGTTTCCAAGATTGGACTTTGCAGATCCCACTCTTG
TGTGCTGTGTAGGTCCCTGATTGTGTTCATTTATCAAATTTCTGGATGGATCATGCTCACTTTCAACGAGTGCTACAGTT
TGTCTTGATTTCTGTTGTTGACATCTCCATCGAGAGCATACTCTTTCTTTTCGCGGATCCAGCGAGAACATACTCGACTA
CTC----TGCCATTTGAACTACTCAATTCGCCTTTCCCGTCAGCGATATGCATGTGCCCAAATGCAATACGACCAACTCA
TATTCATTTCCTACTACAGAGCAGCAACAT--CTGGTCTATGTTCCGTGCGGTGCTCGTGAACTTCTGAAAGTCGTGGTC
ATGCTGAGAACTCCCAAAAATAAACTGCCAAATCAACAATTTGTCCGCATCGATCAGAATTAGAAGCCACTCGCCAAAAG
TTGCGGTAGCTTCTAGCTGCGCTACACCGTTGAAATGCATTCCAAACTGGACCGGTTTTGTTTAGTTTCAGAAGTTAGGA
GGGGG-AAAACAAATCGGAGGTTGCATTAGCAGGTTTCAACCAGTGTCAGATTTTGGAAAGCTTCAGTTTGTGCAATTTT
AAGCC-GACAAGTATGGGCAATTTCCAGTCAC-
>chr3B_535
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------GCACTCGAGACACCGTGTGCACATGC
ACATATGTGTCACTCGGACGCGGATGAACCGCGTACAATAATAA-TTTTAATTTGAATGATCAAGCTCATACTTGTAGGT
AGTACAGAGCCATCAGTTGGACTAAATCTGCCTGTCCCAATCAATCTTATTTTTTTAATTAATTATCATGGACGACAAAT
AATG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------AAACAATACTGC
TGTCTGTCTGTCTGTCGCCACTCTAAA-AATCGACGGAATAATAATTCGCCCGCCCGGCAACGCGTCCATCCAAACATAC
AGATACAGGTGGAGGCGGAGCGGCGAAGCCTTCCAGCAAAACC------------GATCCTTCTCCTTTTCCGTGACAAC
GGCGCGCACACACCAATCCCCGAGCAAAGCAAAGGCCAAACCAGACCACAACACAGCGCAAAAATCTTCCCATCTCCTTC
CTCCTCCTCAGCCCCCTCC-----------CCCCGCTTCGCT--------CGCCCCCTCGCCCCAGATCCGCGGCCATGG
CGTCGCGCCGGCGAATGCTCCTCAAGGTCATCATCCTCGGCGACAGCGGGTGCG-----------------CGCCTTTTC
CCCAGTTTTTTTTTC-------TTCCTTTTTGCGTGATTTTCCGCTGTCCTCTGATCAACCTG---TGCGCTTGTGTTCT
CTGATGATCGCCATCAGGGTCGGGAAGACGTCGCTGATGAACCAGTAAGGCCGAACCACCAATCTCGCCCTGTCTGATTC
GTCTAATTCGGGCTATTCCTGTGC-GGGGGTTTGAACGATTTGGGTGGTTGGTTGGTGTGCAGGTACGTCAACAACAAGT
TCAGCAACCAGTACAAGGCCACCATCGGCGCCGATTTCCTCACCAAGGAGGTCAAGATCGACGACCGCCTCTTCACTCTA
CAGGTTCTTCATTCATTCTACTAC----------------------------------TCACAAAC--------------
-----------GGATAATTAGCTCTGGGTGTATTACATCTTGAACACTAACGGATTCTATGCTGTTAGAGATGTGAGTAT
GTGACACTTGCGTGAAACCGCAAAGTTCTCATTCTCTGGTTAGTGTTCTGAATTCTTGAA--------------------
--------------------------------------------------------------------------------
------------TAGGTCCGATGATGATCAAGTTTAGTGGCAG---TACTAAACTAGGACCCTTGTACTCTGCAGTTTGT
TTATGACAGACAGGTTGAGAAGGTTGATTCCTGAGTTATTCAGGTCAACATAAGCCACATTTTTGGTTTATTATAGAGTT
ATGTACTTTTGCAAACGTTCTGCTGGTAGGTGCTTATCGGATAGGTTAACGCGATTACAGATGGTTGGATTTTTTTTGGG
TAGATTTTCC--TTACCCAATTCGAAAGGATATACTTTTGCAAACATCCTGCTGGTAGCCTGGTAGATGCTTATTGGATA
GGTTAATGAGATTACAGATGGTTGGATTGTTTGTAGGGTAGATTTTCCTTACCCAATCGAAAGGCACGTTATGTCATAAG
AAATTACATCAGTTCAGCTCTAGTTCAGTTGTCCACTTGGTTTGCACTACCTCTATATTACAATTTCTCAAGGATTAGAG
GACTGAGACC-TACTCCCTTAGTTCCTAAATATAAGTCATTTTAGAGATTTCAATACGGACTACATACAGATGTATATAG
ACCTATTTTACAGTGTAGATTCGCTCATTACTGGAATCTCTAAAAAGACTTATATTTAGGAACAGTGGGAGTAGTTGAGA
GGAAAAAATAATAATTAGAAACGATGCAGGGGAATTGCATGTCAGTGCATTAAGA--------CAGAGAGAAAGCTGTCT
TA-CAC-TTCCAGTGGCCCAACGCTATATGCATGAACAAAGAAAAATAAAACCTGTCCAAGTCCAGAGGAAACATGAATT
TTGCAAAGTTGTGGCTTCAG--------TAATGTGAGTTACTATTAAAAAGCTATGCAATATTACTTATATTGTAGCCAT
CGGTCCTATCCTTTTTT---ATCATACTCTGGGGTCTCTTTCTGTTACTCTGTTACATATAGTATAATTGATGCGCCCCA
AATCCTCCAGTACTGTGATCGTCATAAATTGATGAACACATAGGTACTATTTCTCGAACTTTATGGACCATGTACCGACT
TGCTTGCTTTGGTTAAGTCTAAGAAATCTCCAGATTTTTATGACTGGGAATGAACTACTTTGTTGAGCTGTTATCTGCTG
GCACTCAACTTTCTTAAATCTGGACTAGAGTATTGAACGTTCAGAGACCCTGCCATCTTTTCTATTTAACAGGACAGCAA
TGAAGCAGCCTGTTCAGT-GCATTCTCTATGGCCCATCTCTCATTCATCATATTTGAATCAAGGATATGACCATATGGGA
TAGCTAAACAATTCATTTATACCTATACCTGAGGTTCAGAAATTTGTCTCTTTATCCCCACCGGATAGTTTATTTGAATA
AGCATAAACAAATGAT--TTTTT-TGGAGACCGCTGTCTTTTTAGTTATACAAT-TCAAACTATGTACTTGGTATGCCTG
TTAAAAAAAAAC--------------------------------------------------------------------
-------------------TTGGTATGCTGGTTGATTTGATTTTAGCTATTTTACTTGATTTACAAATTATCTGATGGCT
GTGAGTACTAGTTAATAACATCAGATA-TTTTCTAAGATGAAATGAACTGAAGTATAGAT----------AATAATCTTG
ACTCCAAGTGAAATTAATTGTACTGTCTTTAAAAAAGCTGGAAACGAATATGAACAACATTCTGTTACGTTTTCGTTAAT
ATCAGTCCGATGATTCTATTACTTAAATTGTGTATATTGCACAATTCAGTGAAGTAACTCTGTGTACATTCACCGGACAC
TTAATATGGTTGAGTTTTTTTTGCTAGTGCAAATGGCCTAGCAGCTTATAGTTTTTTTTGC-TAGTTCTGCTTTTGCGTG
TATATTGTTTTTGGTTGCTGTGAAAAGCCTTCA-TTTTGTAGTGCTTGCTGCTTTGTGTCTTA-TTCT---ATTGCGATG
AAGCATGGATCGTGTGCGTTATTGCGACAAAAAAAGCAAAGTAACCCCAAAATCTTCACTACCCTAGGTAGTTAATCATT
ACGTATATCTATGGCCTGATTAA-TTTATAAGAACACTA-GAATGTACATCTGTCTACTTTGTTCCTTGTGAAACAATAG
TTCCACTCACATTTAATCTTACCGCATGTTCGT-TTTCCTGGAACTTAGATATGGGACACGGCAGGACAGGAACGTTTTC
AGAGTCTTGGTGTGGCGTTTTATCGGGGAGCTGACTGTTGTGTTCTTGTATATGATGTCAATGTTACCAAGTCATTTGAA
AAACTCAACAACTGGCGTGAGGAATTTCTAATTCAAGTAAGTAGCTTGCTTAGTTGCCGGTCAATCAAATGTACTGCAAT
ATGTATGGTATACTGAAAGTTTGGCCCGTCATTCCTGTTGCAGGCTAGCCCGTCAGATCCAGAGAATTTTCCTTTTGTTT
TACTTGGAAACAAGATTGATGTTGATGGTGGTAACAGCAGGACTGTGAGTATTCTTCACGACAAAGTGCCTATTTTTCTT
GCTTTCACTTGATATATATACTTTATAATATTTTTGAGATTGTTTGTATTTCAGGTTTCTGAGAAAAAAGCTAAAGCCTG
GTGTGCTTCCAAGGGAAACATCCCTTATTTTGAGACGTCTGCTAAAGAAGGCTTCAATGTGGAAGCAGCTTTCGAGTGTA
TAGCAAGGAATGCCATCAAGAATGAACCTGAAGAAGATATGTAAGCTTACTTCTTGCAGTGGATGCATTGTATACGCAAA
AGGAGAATTCTTACTTGATTATTTTCCTCGGAGTGGAGGGCATTTCGAAATAGCAACACAGAGATGCACTAACAGTATGT
TAAC---TATATTGATGTTTTGCTAAATTCTTGTAGATATCTCCCTGATACAATCGACATGGGCGGTGCTGGAAGGCAAC
AACGCTCGTCAGGTTGTGAATGCTAGAAGATACGGATCCTCAGTGTCGGT-------------------GCTCTTCCGGA
GTTTGATATATAT--TTAGTTTGAAAGCTGCTATCTTGTATCGGTTGCTACATATGGTTGTCTAGTATTCACTCCCTTCC
AGCGAGATGGGAGAAATTTCATTCGTAAGTTCTGATTCTTTCTATGAGCGTTAGATGATATAGAGCTGGCATTCTTTTTA
GTTTTTGCGAGGTTTTGGTTGTCGTGGTGCGTACATATCTCAGAAAGATCAAATATATAT--TTATGAAGATTGTAAATG
TACAGAAGAACGGCCCAACATTCCTGGTTTCCTGTTCTAACCATTTTGATGGTAGATCCAAATCTATAACCATATATGGT
TCTTCTTTTACCCATCCTTTTCT-TTTCTATTCCCTTCTTCCATGGTATGGAGTATGTATGGATCAGCCACTACGATTTT
CATTTCTGTGTATTCATGCCGTAGTTTGCTGCAATGATGTGACA------CAAGATTGGACTTTGCAGATTCCACTCTTA
TGTGCTGTGTAGGTCCCTGATGGTGTTCATTTATCAAATTTCTGGATGGATCACGCTCACTTTCAATGAGTGCTACAGTT
TGTGTTGATTTCTGTTGTCGACATCTCCA--------------------------------GCGAGAACATACTCGACTA
CACTGTGTGCCATTTGAACTATTGGATTCGCCTTTCCCGCCAGCGCCATGCATGTGCCGAAATGCAAAACGACCAACTCA
T--TCGTTCCCTACTACAGAGCAGCAACATATCTGGTCTATATTGCGTGTGGTACTCGTCAACTTCTGAAAGTCGTGGTC
ATGCTGAGAACTCCCAAAAATAAACTGCCAAATCAACAATTTGCCCGCGTCGATCAGAATTAGACGCCACTCACCAAAAG
TTGCGGTAGCTACTAAGTAAACTACACCTTTGAAATGCATTCCAAACTGGAGTGGTTTCGTTGAGTTTCAGAAGTTAGGA
GGGGG-GAAACGGGTAGGAGGTTGCAGTAGCAGGTTTCAACCAGTGTCAGATTTTGGAAAGCTTCAGTTTGTGCAATTTT
AAGCCTGACAAGTATGGGCAATTTCCAGTCAC-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS---S------S--S----------------SSSSS--------S-SS---------S--------------SS-SS-S
---SS-S-SS--SSSSSSSSSSSSSSSSSSS---------S------------------SS-------------------
-S-------S---------------------S------------S-----------------------------------
----------------------------------------------------------------------------S---
--SS--SS------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------S-----------------------------------------
---------------------------------------------------------------------S---SS-----
------------------------------S-----------------------S--------SSS-S-SSSSSS-----
------------S---S--SSSSSSSSSSS-------S-----------------S------------------------
------------------------------------------------------SSSS---S-S---S---------SSS
---SSS------S-SSSSSSSS-S-S--SSS-S-----S--S----S-SS--------S---SSSS-------S----S-
S-S-------S-S-----------------------------------------------------S-------S-----
----S-----------------------------------S---------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------S-------------S---
------S-------S------------------------------------S----------------------------
--------------------S-------S-------------S----------------S--------------------
--------------------------------------------------------------------------------
----------------------------------------S--SSS----------------------------------
--------------------------S-----------------------------------------------------
---------------------------S----S----------------S--S------------------S-----S--
SSSSS---S-SS----------------S----------------S-S--------------------------S-----
----------S----------------------------------S---------------------S------------
------------------------------------------------S-------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S--------------------S------------------------------------
------S--------------------S---------------------------S-S----------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
---S--S--------------------------S-------------S--------------------------------
------------------S--------------------------------------------------------S----
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
----S------------------------------------------------------S----S---------------
-----------------S-----S-----S--S----------------------S------S----S---------SSS
--S-SSSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS-----------S--S-----------------------------------S----------
----S--------S------------------------------------------SS-SSSSSSSSSSS----------
------------------------S------------S------------S---S-------------------------
---S-------------------------S-----S--------------------------------------------
-------------S----------------------------S-------------------------------------
---S-----------------------------S------S------------S--------------SSS---------
----S-------S-----------S------------S--S-------------------S------S------------
----------------------S------S--------------------------------------------------
--------S---------------------S--------------S-----------------S----------------
-------S--------------S--------------------------------------------------S------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
---------------------------------------SS-S-------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S------S---------S-------------S----------------
----------------------------------------------------------------------S--------S
--------------------------------------------------------------------------------
---------------------------------------S--------------------SS------------------
-----S------------------------------------------------------------S-------S-----
-----------------S---SSS----------SS------------------------S------------S------
------S-------------------------------------------------------------------------
---SS-------------S----------------------S----S---S------------------S----------
------------------------------------------------------------------------S-------
---SS--------------------------------S----------------------------------S-SSS-S-
------------------------------------------S------------------------------S----S-
---------S------------------------S---S--------------------------S----SS--------
---S-------------------S----------------------------------S-----------------S---
-----S--------------S-----------------------------------------------------------
----------S----------S---S------S
>forward_123
--------------------------------------------------------------------------------
-----------------------GGCACAACATTGCTTCTGGG-------------------------------------
--------------------------------------------------------------------------------
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---------------------------------
>reverse_1507
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TCCCTGTCCGATTC
GTCTGA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------
>forward_1188
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------------------------------------------------ACACACGGCGCAAAATCTTC------------
--------------------------------------------------------------------------------
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>reverse_3218
--------------------------------------------------------------------------------
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-----------------CTGCGTTCTCTATGGCCCAT-------------------------------------------
--------------------------------------------------------------------------------
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>forward_2684
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------------------------TGCAGGGGAATTGCATGTCT------------------------------------
--------------------------------------------------------------------------------
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---------------------------------
>reverse_4206
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---------------------------------------------CTAGATATGGGACACGGCTGG--------------
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>forward_4013
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-------------------------------------------------------------------------TGCAAAG
AAGCGTGGATTGC-------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_5839
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------------------------------------------------------------------------------CC
ATGCTGAGAGCTCCCAAA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
