>input_sequence_21975
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-----ATGAACGCAGATGACGACAAGTCTGTTGGGTCTGCACTTACCCGTCAAGTAAGTAGCTTTACTTAAAGAGTATCA
TTTGAAAGGAACTTCGCAGGGCTCCCATAACATCCAAATTCCCTTTTTTGGGTCTTGTTTAACCTCTTAAAATTGTAACA
ATGGACCACTTTACTCTGCACTGGTCTTGTTAGGTGGTTTTTATGACGTGGATGCGAATTGGCTCCTAGTCCAAAACATA
GTGGTTTGTGTGACATGGCATCCACTTGTGTGTGTTTACCTGTCAGTGGGTCCCATATGTCATACCCAACTTAAAAAATA
CTTACTTTATTCAGTAATG-TTGTAATTTTAAATTTGCACTAAATCAATTTTTAGC-TTTGGTCAAGAATGTTGACTAAA
AAAAACTAAACTGCAAACATTGTGAAAAAGAG--TGTAAAATTAATAAATCGTGAGCCACATGTCATACCCCCCTTTCTC
TCTTATCACATAACTTGTCATTGACCGTCGACCCAAATCCATTCCTTCTCTCGATTTTGCTGGGCAAGAGGCGCCTCACT
CCTCCGGGAGGATGAACATTGATGTCCAATGCTCGACTGCTCAATAGTTGATACCATGGTTGAGCAATTTTTCAAAGGAT
GGGCATGACGACTTGGCTCATATCCTCCTTGTCAATGGTGTGAACCCATAACTGGGCGCTGAACTTGAAATGGAGATGAG
GCCTTTGCTGTACTTATATTTTTCTTCTTCTATTTGCTATGTCATTGCCGTGCCTGCCACATCACGTGCCATAGTGGACA
AACCACCATTGTTATGTCTCAGAAGTAATGACCATGGTTCGAATAATTTATATTGTATAGTTGAAGATTGAAATATTATC
TAGGACAATAGTTCATAGATGTAATATGGAGCTTTGTTTTCCCCTTGGCGATGGTAAGGGAGGGGTAGAGAAGATTGATG
TTTGATGCTGAGCACTCCCCCCTGTATTTTGGGTCAAACTTTGACCTTAGATTTGTCTAACAAAATATAAGTGATATGCC
ACAAAAATTATATTGTTGTATTCATATTTGAAAGAAGTTTCTAATGAAGCTA--TTTTTGGCATATGACTTGTATTTTGC
TAGTCAAATTTATGATCAGTGTTTGACACAAAATACAAGGGGACTAATAAACCTGAACAGAGGATTTAACATGGTGTGTT
AGATACCAATGCGGAAAATTGTGGATGTGGCAATATATGTGGTGATACTACACATCCACATACTAGGAACCACTTGGCAA
AACTGATTTACGGGCTAAATTAACAAGTATTCAAGGTTAAATATGATGACAAATTATTTAGCGTGTTACATGAGCTATGC
GGATATTTAGACAGTGTAAAAGTCCATTTTTGTATTTCATAATGTTGTTAATACTATATTCATCACGATAAACTATTATT
TATTTCAGGTTGATGGCATAAGTCAGATTTTTGTAAAAGATATTGATGGCCAAAAAATGAACCACCCCTGTTCTTTGCAC
TACTACAATGGATTTATCAAATTGGGTAACAAAATTGAGAATTTGGAGTCAATTGATGTAACTGTATTGGGCTTCATAGA
TACTGAAATTGGAAAGATTCATTATGACAATCTCGCAAATTTTGATCATCCTGGGATAATTGAAGCTTTCGCATATGGGG
TTGGCAAAGGACAGCACTCAAATAACTCCTTTCTGGCTGTCACAAAATTTGAAACAACATTTGAAGGATACCTTCGGAGG
GATGGTCTATTGGCGACTGATCAGCAAAACCGATTCACTGAGAGCTTCATAAACTTGCTGAGGTATAAT------TTTTT
TTGTTTGTTCACTAGATATATCTTACCAGTAGCGTTACTTAGTCCTATATAAGAGTAATTCTTTATCTATATTCATGATT
GGTCTTATCATTACCATTACGCAAGTTAAATTTCTTTAGCTTATTTGTTAACTAGATGACCTGAATTATTTCTGCTTTCA
TACCGAGTTTTAGCAACAAGCTGCCCTATGAGGTCTCATTCATTGGCTGAAAAGGCTTGAGTGAAAAACCGAGTTTGGTG
GAGGGGTGGGGGGTGGGGGTGGATTATAACTGTTGGTACCGGATTCCTGGAAATTGTGAAGTATCTTTTGAATAATGTAC
TCCGAGACTTAATGACAAAATCAATATTTTGTCTTTTGATATTTATGAGTTTTGACTCCAGGCCCCTAGGCTTCTTAGGA
TTTGCACGTATGAAAATGTTGATTCGTTGTTATGTTCTCACCTTTAATTATTTTATTAAAATCAGTTTTTATGCTATTTT
GATAGGGATGTCATTGTAGCCATGGAGGAGCTGCATCGTCAAGGCTATTATTGCGCAAAGTTTCATGGAAGTCATTTTGC
AATCATAAACGAAGGCGGTTCACAAAGGGCGAGATTGTGGAGGTTTGGTAAAATTAAAGGAGGTACCAAATTGACAACAA
AAAATACAAATTACAAATTATATTGGTCTGTTTAATTCATTGGAATACAAAGTACATTTGTAAGTTGCATTTTGATTATA
TTCTAATTGTGAATCTATTTACTGTAGATACTGAAGCAGCAATAAGCGAGTCCAAAGCTAACGATTGGGTAAGGTTGGGA
TACAAGATTGAGAATGTATCGCTAGCCCCAGAGTCTAAAGATCTTTTTAAGAGAATTATCGACAGAAAACTGCAAGGGTG
AGAATATAAATTCTTATTGCTTAAAGTTATTTCATCAGTAGAGTTGTACTAAGATAAAAAAATGTTTTTGTTAAATACAC
AGGAGAAACATCCTAAAGCATTATGCCTTGTTAACTGTCAGAGAAAAGTTTGAGAATATTTTATCCTTGAACCAATATAT
AGCACTCCACTTGAAGGAACCACAAATGGAACGTGAACATCTGATAGTGTCTAATCTGAGTCTACAAACATTGGAGGAGA
ATTTGGATAAAATACATGTTTGGAACATGCTTTCCTTTGTACAATTAACACGCGTCAGAAAAACATTAAGGGGCTTCATA
TACTCCTTGAGAACAATCATTGAACATGAAGTTCAGTTCCTTACACCCGAGGTAAGTATTGAGAACATTGTAAGCATCAA
TTTTAAAATTACCTGTTTAAACGTATTTATTTTCTAATGCTTACTCTTATATGTAAATGTTCCATAGTTGCTGGCAGAAG
GAATATTCAAGGATCTTGAACACTATTTTCAACACGAATGGAAATTATTATACCAGAAAGTGCAAGAGATTGCAATGGAA
TTGAATTTGAAATATTGA--------------------------------------------------------------
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----------------------------------------------------------
>chr3D_1_TraesCS3D01G427200
TTGTAATCAGCCGCTGTCACATCAAGTTTGTCACTTGTCTT-ATCCAGCTGCCGCACCATCCGGTCCAGTCTCCCGCCAT
CCCACGTTCTATCGTCCCCGGCCCCGTCTCCTTCCATCGCCGCCAGCCGACCGGAGCAAGGTTGACGTGGCGAAGGCGAG
GTGCGAGCTGGTGACGCCCTGGTCCCGCCCCGAT------------------ATCTGCCGCTTGCAGGCCTGTGGCTTGG
AAAGGGGCGCTGGCATTCTCTTCTGGGGACTCGGTCGCACAGAAGGAGGACCAGCCAATCGTAGCGAGCATTGATGTGGG
GAGGTGTGAGCCGGTGACGCCCTGGTACTGCCCCGAGCGACCGTGCAGGGATCTGCCGCCTGTAGACCCGTGGCTTGAAA
AGGGCCAACACTGGTGCGAACATTCTCTTCAGTGAACTTGGTCA---------CTTTGCTTCATGACTTTCTTAACCTGG
AAATTGTATCATGAAGTTTGCTTTTATGAGTTGAGTTCAAGAATAGGCTAGGAAAATGCATTTAGGAGCAAAAATGTACA
TAAAACACTATCAGCATTAACAAGAGTCCGTGCGCACACTACTTACTATTTATAGGGAAATTATGACA------------
--CTTTGAATCTGCCACTACAAAAAAGCGAAAACTATGGAATTGCCGCTATGATAGTTGGTTTCCTTGTGAGTTTATCAT
CGCCCATCTGTCTCTGTCCATTCCAGTCACGAGTC---CTTATATTCCAGTGGTCCCCAAATAGCTGACTTAAACAAATT
TGTATGTGCAAGTAGAAGTTGTTGTTAGTAATATTCATGCGTTGAATGATTGAGACACTGGTTTATGTACTAATGAGGTT
CATTGTCCATCTTCACTCTGTATTTATCATGAAATCAGTTCTGTAAAATATGTGTTAATTTTAAGATAATCATTAGACAT
CTCTTTCTTTTCTGCAAAAAAGAAGAAACTGAAATTTCTATATAACATATATGGTGTTTATTTGTAGGTTTCAGAATTCT
TTAATATGAACGCAGATGACGACAAGTCTGTTGGGTCTGCACTTACCCGTCAAGTAAGTAGCTTTACTTAAAGAGTATCA
TTTGAAAGGAACTTCGCAGGGCTCCCATAACATCCAAATTCCCTTTTTTGGGTCTTGTTTAACCTCTTAAAATTGTAACA
ATGGACCACTTTACTCTGCACTGGTCTTGTTAGGTGGTTTTTATGACGTGGATGCGAATTGGCTCCTAGTCCAAAACATA
GTGGTTTGTGTGACATGGCATCCACTTGTGTGTGTTTACCTGTCAGTGGGTCCCATATGTCATACCCAACTTAAAAAATA
CTTACTTTATTCAGTAATG-TTGTAATTTTAAATTTGCACTAAATCAATTTTTAGC-TTTGGTCAAGAATGTTGACTAAA
AAAAACTAAACTGCAAACATTGTGAAAAAGAG--TGTAAAATTAATAAATCGTGAGCCACATGTCATACCCCCCTTTCTC
TCTTATCACATAACTTGTCATTGACCGTCGACCCAAATCCATTCCTTCTCTCGATTTTGCTGGGCAAGAGGCGCCTCACT
CCTCCGGGAGGATGAACATTGATGTCCAATGCTCGACTGCTCAATAGTTGATACCATGGTTGAGCAATTTTTCAAAGGAT
GGGCATGACGACTTGGCTCATATCCTCCTTGTCAATGGTGTGAACCCATAACTGGGCGCTGAACTTGAAATGGAGATGAG
GCCTTTGCTGTACTTATATTTTTCTTCTTCTATTTGCTATGTCATTGCCGTGCCTGCCACATCACGTGCCATAGTGGACA
AACCACCATTGTTATGTCTCAGAAGTAATGACCATGGTTCGAATAATTTATATTGTATAGTTGAAGATTGAAATATTATC
TAGGACAATAGTTCATAGATGTAATATGGAGCTTTGTTTTCCCCTTGGCGATGGTAAGGGAGGGGTAGAGAAGATTGATG
TTTGATGCTGAGCACTCCCCCCTGTATTTTGGGTCAAACTTTGACCTTAGATTTGTCTAACAAAATATAAGTGATATGCC
ACAAAAATTATATTGTTGTATTCATATTTGAAAGAAGTTTCTAATGAAGCTA--TTTTTGGCATATGACTTGTATTTTGC
TAGTCAAATTTATGATCAGTGTTTGACACAAAATACAAGGGGACTAATAAACCTGAACAGAGGATTTAACATGGTGTGTT
AGATACCAATGCGGAAAATTGTGGATGTGGCAATATATGTGGTGATACTACACATCCACATACTAGGAACCACTTGGCAA
AACTGATTTACGGGCTAAATTAACAAGTATTCAAGGTTAAATATGATGACAAATTATTTAGCGTGTTACATGAGCTATGC
GGATATTTAGACAGTGTAAAAGTCCATTTTTGTATTTCATAATGTTGTTAATACTATATTCATCACGATAAACTATTATT
TATTTCAGGTTGATGGCATAAGTCAGATTTTTGTAAAAGATATTGATGGCCAAAAAATGAACCACCCCTGTTCTTTGCAC
TACTACAATGGATTTATCAAATTGGGTAACAAAATTGAGAATTTGGAGTCAATTGATGTAACTGTATTGGGCTTCATAGA
TACTGAAATTGGAAAGATTCATTATGACAATCTCGCAAATTTTGATCATCCTGGGATAATTGAAGCTTTCGCATATGGGG
TTGGCAAAGGACAGCACTCAAATAACTCCTTTCTGGCTGTCACAAAATTTGAAACAACATTTGAAGGATACCTTCGGAGG
GATGGTCTATTGGCGACTGATCAGCAAAACCGATTCACTGAGAGCTTCATAAACTTGCTGAGGTATAAT------TTTTT
TTGTTTGTTCACTAGATATATCTTACCAGTAGCGTTACTTAGTCCTATATAAGAGTAATTCTTTATCTATATTCATGATT
GGTCTTATCATTACCATTACGCAAGTTAAATTTCTTTAGCTTATTTGTTAACTAGATGACCTGAATTATTTCTGCTTTCA
TACCGAGTTTTAGCAACAAGCTGCCCTATGAGGTCTCATTCATTGGCTGAAAAGGCTTGAGTGAAAAACCGAGTTTGGTG
GAGGGGTGGGGGGTGGGGGTGGATTATAACTGTTGGTACCGGATTCCTGGAAATTGTGAAGTATCTTTTGAATAATGTAC
TCCGAGACTTAATGACAAAATCAATATTTTGTCTTTTGATATTTATGAGTTTTGACTCCAGGCCCCTAGGCTTCTTAGGA
TTTGCACGTATGAAAATGTTGATTCGTTGTTATGTTCTCACCTTTAATTATTTTATTAAAATCAGTTTTTATGCTATTTT
GATAGGGATGTCATTGTAGCCATGGAGGAGCTGCATCGTCAAGGCTATTATTGCGCAAAGTTTCATGGAAGTCATTTTGC
AATCATAAACGAAGGCGGTTCACAAAGGGCGAGATTGTGGAGGTTTGGTAAAATTAAAGGAGGTACCAAATTGACAACAA
AAAATACAAATTACAAATTATATTGGTCTGTTTAATTCATTGGAATACAAAGTACATTTGTAAGTTGCATTTTGATTATA
TTCTAATTGTGAATCTATTTACTGTAGATACTGAAGCAGCAATAAGCGAGTCCAAAGCTAACGATTGGGTAAGGTTGGGA
TACAAGATTGAGAATGTATCGCTAGCCCCAGAGTCTAAAGATCTTTTTAAGAGAATTATCGACAGAAAACTGCAAGGGTG
AGAATATAAATTCTTATTGCTTAAAGTTATTTCATCAGTAGAGTTGTACTAAGATAAAAAAATGTTTTTGTTAAATACAC
AGGAGAAACATCCTAAAGCATTATGCCTTGTTAACTGTCAGAGAAAAGTTTGAGAATATTTTATCCTTGAACCAATATAT
AGCACTCCACTTGAAGGAACCACAAATGGAACGTGAACATCTGATAGTGTCTAATCTGAGTCTACAAACATTGGAGGAGA
ATTTGGATAAAATACATGTTTGGAACATGCTTTCCTTTGTACAATTAACACGCGTCAGAAAAACATTAAGGGGCTTCATA
TACTCCTTGAGAACAATCATTGAACATGAAGTTCAGTTCCTTACACCCGAGGTAAGTATTGAGAACATTGTAAGCATCAA
TTTTAAAATTACCTGTTTAAACGTATTTATTTTCTAATGCTTACTCTTATATGTAAATGTTCCATAGTTGCTGGCAGAAG
GAATATTCAAGGATCTTGAACACTATTTTCAACACGAATGGAAATTATTATACCAGAAAGTGCAAGAGATTGCAATGGAA
TTGAATTTGAAATATTGAACGTGGTAAGATGTTTCTATTTTTGTGCTTTATTTTATTTTTCAGCTTAAGATGTTTGTATT
GCTGTTTTTTGGATGTCGAATATGAATATATAATACAATGTGTATCTGAAGAATTCATGTCATCCTTTTTGCGCTTATAT
TCAAATTCAGATTATCCTTATGGAGTGAAAAAAGAAATTAAACCAGTCAATCTAACTTTTCTATTGTCCTTATTAAGTTC
TTTTCATCAGTTTCTTCGTTCTTCATTGTTGAAGTGTCTACCAAACTGCCAATAGGTGTATGAGTTCTATTTGGCAGGAA
CATGTGGCAAAAGGAGATTGAATTATGCGAAGCCAAAAACTATAATATTTGGTAAAAAAATATTTTATATTTATTGATTC
TCAGAACTCTGTAATCAAAATGATTAAATGATCTCAATTTTTTGTTTTGCTATTGGTAGACATGTAGTATTTAGTACATA
GATAGGGGGTTCTTTGCAAATTTACCTTGTGCGTGTATTGTCCCTTAGCCTCTTATAGCAATATAAAAGCTCATTCACTG
TCAGCCAGAATTTATCTTTTGCCTCTCATGGTCTGTCCACACCTCAGTCCCTGAGCCTGTTCCTTGTGTCAACTGTCCAA
CCAGTGGCAATATAAAAGCTCATTCACTGTCAGCCAGAATTTATCTTTTGCCTCTCATGGTCTGTCCACACCTCAGTCCC
TGAGCCTGTTCCTTGTGTCAACTGTCCAACCAGTGCCAAATCCTTGGTGGAAGACCACTCCGACGTCATCTCTACCCCCG
TAACACCCCCTTGCGTCTCCTTTCTTGCTCTCTCTTTATAAATATCTCTTCATTCTTCCTCCAGCTGCATATATTAATAA
AACTAACAATAGCAAAACAGTGTGATGATTGTTGGTATGGGAATATGAATGAAGTTGTGTGTTTAATTGGATTTCCTTTG
CACTGCATTTATTTATGCTTTAGCCTTTTTGAATTCCTTGGCCTTCTGTCACTGCATG
>chr3A_1
TTGTA-TCCGCCGCTGTCACATCAAGTTTCTCCCTTGCCTTGATCCAGTTGGCGCACCATCCCGTCCCGTCTCCTGCCAT
CCCACGTTCTATCGTCGCCGCCCTAGGGGTCCAAGGAGGA--CCAGCCGACCGGAGCAAGGTTGACGTGGCGAATGCGAG
GTGTGAGCCGGTGACGGCCTGATCCCGCTCCGAGCGACCGACCCGTGCAGGGATCTGCCGCTTGCAGGCCCGTGGCTTGG
ATAGGGGCGCTGACATTCTGTTC---------------------GGAGTACCAGCCAACCGTAGCGAGCATTGCTGTGAC
GAGGTGTGAGCGGGTGACGCCCTGGTACTGCCCCGAGCGACCGTGCAGGGATCTTCCGCCTGTAGATCCGTGGCTTGAAA
AGTGTCAACAGTGGTGCGAATATTCTCTTCAGTGAACTCGGTTGCACGGTAAGCTTTGCTTCATGATTTTCTTCACCTGA
GGGTGTATCGTGAAG--TTGCTTTTATGAGTTCAGTTTAAGAATAGGCTGGAAAAACACATTTTGGAGCAAAAATGTACA
TAAAACACTATCAGCATTAACAAGAGTCCGTGAGCACACTACTTACTATTTATTATGACACTGCTACTAGTTCTATGGGA
AGCTTTGAATCTGCCACCAATAAAAGGTGAAAACTATGGAATTGCCATTATGATCGTTGGTTTCTTTGTGAGCTTATCAT
CGTCCATCCGTCCCTGTCCATTGCGCCCAGTCTAAGTTCTTATATTCCAGTGGTCCCCAGATAGCTGACTTAAACAAATT
TATATTCCAGTGGAA-----GTTGTTAGTAATATCCACGCGTTGAATGATTGAGACACCGGTTTATGTACTAATGAGGTC
CATTGTCCATCTTCAATCTGTTTTTATCATGAACTCAGTTCTGTGAAATATGTGTAAATTTTAAGATAGTGATTACATAT
CTCTTTCTTTTCCAC-AAAAAGAAGAAACTGAATTGTCTATATAACATATATGGTGTTTATTTGTAGGTTTCAGAAATCT
ATAATATGAGCACAGATGAAGCTAAGCCTGCTGGGTCTGCACTTACCCATCAAGTAAGTAGCTCTACTTAAAGAGTATCA
TTTGAAAGGAACTTCGCAAGGCTC-CATAACATCCAAAGTCCCTTATTTGTGTCTTATTTAACCTCCTAAAACTGTAACA
GTGGACCACTTTACTCTTCACTGATTTTGTTAGGTTGTTTTTATGACGTGGATGTGAGTTGGCTCCTAGTCCAAAACACA
GTGGTTTGTCTGACATGGCATCCACT--TGTGTGTTTACCTAGCAGTGGGTCTCATATGTCATACCCAACTTCAAAAATA
CTTACTTTATTTCGCTATGTTTGTAGTTTTGACTGTGCACTAAATCAAATTATTTAGTTTGGCCAAGAATGTTGA--AAA
AAAGACATAACTACAAACATTGTAAAAAAGAGTATGTAAAATACATAAATTGTGAGCCACATGG----------------
-CTCATCACTTAACTTGGCATTGACTGAT---CCAAATCTGTTCCTTATCTCGATTTTGCTGGGCAAGAGGTGCCTCACT
CCTCCAGGAGGAGGAACATTGATCTCCAACGCTGAACTGTCCAATATCTGAAACCATGGTTGAGCAATTTGGCCCTCTCG
TATTTTG-------------------------------------------------------------------------
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------------------------------GGGTCAAACTTTGACCTTAGATTTGTCTAACGAAATATAATTTATATGCC
ACAAAAATTATATTGTTGGATTCATATTTGAAAGAAGTTTCTAACGATAAATTTTTTGTGGCATATAACTTCTTTTTTGC
TAGTCAAATTTATGGGCAGAGTTTGGCACAAAATACGAGGGGACTCATAAACCTGGACGGAGGATTTAACATAGTGTGTT
AGACCCCAATGGGGAAAATTGTGGACGTGGCAATATATGTGGTGATACCACACATCCACATGCTAGAAACCACTTGGTAA
AACTCATTTAGGAGCTAAATTAACAAGTATTCAAGGTTAAACAAGATGAAAAATTGTTTAGCATGTTACACGAGCTTTGC
GAATATTTGGACAGTATAAAAGTACATTTTCGTATTTTATAATGTTGTTAATACTATATTCATCATGATAAACTATTATT
TATTTCAGGTTGATGGCATAAGTCAGATTTTTGTAAAAAACAGTGATGCCCACAAAATGAAACATCCCTCTTCTTTGCAC
TATTACAATGGATTTATCAAATTGGGTAACCAAGCTGAAAAATTGGAGTCAATTGATGTAACTGTATTGGGCTTCTCAAC
TACTGAAATTGGAAAAATTCATTATGACAATCTTGCAAATTTTGATCATCCCGGAATAATTGAAGCTTTCGCATATGGAG
TTGGCAAAGGAAAACACTCAAATAACTCCTTTCTGGCCGTCACAAAATTTGAAACTACATTTGAAGGATACCTTCGGAGA
GATGGTCCGGCGCT---TGATCAGCAAAACCGATTCACGGAGAACTTTATAAACTTTCTCAGGTATGATTTTATATTTTT
GTGTTTGTTCACTAGATATATCTTATCAGTAGTGTTTCTTAGTCCTATAGAAGAGTAATTCTTTATCT-TATTCATGATT
GGTCTTATTATTAGCATTAAGCCAGATAAATTTCTTTAGCTTATTTGTTCAATAGATGACCTGA-TTGTTTCTTCTTTCA
TACCGAGTTTTTAGCAAAAGCTGCCCTATGAGGTCATATTCATTGGCTTAAA----------------------------
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>SNPs
-----S--S--------------------S--S----S----------S--S----------S----S------S-----
----------------S---S--SS-SSSS-SSSSSSS-SSS--------------------------------S-----
---S----S-------S----S------S----S------------------------------------S---------
-S----------S------S---SSSSSSSSSSSSSSSSSSSSS----S---------S--------------S----SS
-----------S------------------------------------------S-----------S-------------
--S-S-----S---------S-----------------S---SS----------------------S------S-----S
SSS-SSSSSSSSS-SSS---------------S----S-----------S-S----SS-----S----------------
--------------------------------S--------------------SSS--S-S-SSS--S------------
-----------------S-SS----S-S------------------SS------S---------S-------S-------
--S-----S---S---------S-SSS--SSSSSS------------------------S--------------------
-S---SSSSSS-S-SSSSSS--------------S--S--------------------S--------------------S
---------------S-----S-----------S----------S----------S------------S-S----S-S--
------------SS-S-----------------S-S----------------------------------------S---
S--------S-S-------S-SS---S---S-----------------S--------------S----------------
------------------S-----S-------------S------S----S-----S---------S-----S-------
S----------------S-----S-S---------S------------------S--S--------------------S-
---------S----------------SS-------------SS---------S-------------------S-------
-----------SS-SS---------S----S-S-S-------------S--S-SSS------S------------SS---
---S--SS----S----------S------------------SS------S------------SSSSSSSSSSSSSSSSS
S--S-----S-------S-------S-SSSSS-------SS------S-----------------------S--------
-----S------S----------S-----S---SS----SS-----SS---S------------------SS-SSSSSSS
SSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------S--------S-S-------
------------------S-------------------------S--SSSSS-----S--------S----S-S------
--------------SS---S-----S----------S--------S---------S--S-------------S-------
---SS------S-------------S----------------------S------------S----S----------S--
----S-----S-S----------------------------S-S-----S-----S------S-------S-----S---
-S------S------S-------S------S------S---------------------------S--------------
--------------------------------------S-S-S-----S---S--------S--S----S----------
--S---------------------------S--SS---S--S---------------------------------SS-SS
---------------S-----------------S-----------------S--S-----------------------S-
-----------S-S-----------------------S-----------------S-----------------------S
-------SSSS-SSSSS---------------------S----S---S--------S--S------S-------------
S------------------------S------S---S------------S------------------S-----------
--------S----S-----S--S--S-----------------------S-S------------S--S-----S------
-----------SSSS-S------------------SS-----------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_275
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---------------TTCTCTTCTGGGGACTCGGT---------------------------------------------
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>reverse_1752
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------GGAGATGAG
GCCTTTGCTGT---------------------------------------------------------------------
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>forward_1695
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------AGGAT
GGGCATGACGACTTG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>reverse_3464
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AAAGGGCGAGATTGTGGAGG-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>forward_1771
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------GGAGATGAG
GCCTTTGCTGT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>reverse_3695
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TGTATCGCTAGCCCCAGAGT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>forward_3483
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AAAGGGCGAGATTGTGGAGG-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>reverse_5127
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CCCCTTGCGTCTCCTTTCTT------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
